CcUC09G175370 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G175370
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Glycine cleavage system H protein
Location	CicolChr09: 13151883 .. 13154295 (-)
RNA-Seq Expression	CcUC09G175370
Synteny	CcUC09G175370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAGGCCATAACTCTTCGTATGATGATGATGATGATATGGAAGAAAAAATAGCGAAAATCACTGGAAGGAAAAAAAAAGATGAAAAAAAGAAAAAAAGCAGTCTATAGATTAGGCAGTCGCTGCCCACCATCCATCGAAGATAAAGCAATGTCGTAAAACAAAAGTTTCAAACATTTCTTTTATTCTTTGCTGTTAGCAAAATAGAGGAGGAAGAACAACGAAAGAGAGCAAATTAAACAAAAACCATGGCTCTTAGAATGTGGGCTTCTTCTACTGCCAATGCACTCAGACTCTCTTCTTCATCTAAAACCTATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCCACTGGTATTTTTCTGCTCTTTTCTATTTTGCATGCAAACTGTTTGTGTAAATGCCTCTGTGAAGTTTGAGTTTGGTTTTTGCTCTCTTGGATATCGTTTTTGTGCTGTTGTGTTGTTTAATTCTCATTTATGATTCATTTCTCATCTGGGTATGATAAAAGAGGGGCTTTTTAATTTTATTTTTAGAAAGCTTATTGGTTGGATTTGCAGTTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCTCTGTTGCTACCGTTGGCATCACTGACCATGCTCAGGTGCTTTCTATTTTTTCCATGAAATTTATCATTTTCCAAATAATGTAACTCTTGTTTGCCTGAATTGTAGGTTAAATTGTAAGTTTCAGTCATCAATTTTTAGAATTGTGTCTATTTAGTTTCGTTCTTTGAAATGTTTATAATAAATCTTTTAAGTTCTTTAGAAAGTTCTTAATAAGTCTTTACACCTACATGCCTTTTCAATTTTGTGTCTTGTAAGCTTACATTGTTAACTTCACTACTTTAATGGCAACGTAATAGGCTGACTATAAGGGTTGCATTGAAAATCAACCCGTGTCGTGTTAGTGTCAAACAAATTAATTGTTGGGTCATATTAGACTAAAATTGAAAGTTTTGAGACTCATAAAAGCTTTTTACAGGACTAATCAGTCTCAAGGGGACTTAGCTTATAATTTTACCTAAATTTTACTATTTGGAATGATGTTTGGATGAGGAAACTTGGTAGTTACACAATTCCTTTTGCTGTACTCCCTCTTGCCATGGAAACTGATTCAAGCTTTTGTCATAACAACTTTTACATCACTTCATTTTAGAAACTTTACATTTATACTTGGTATTCAAATTTGGGTTGGAAGCATTTTGTTTTCATGCACCTTCACAGGATCATCTGGGTGAAGTGGTGTTCGTGGATCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACCAGTGATATCAACTCCCCAATCTCTGGTGAGATTGTTGAAGTTAACCCACAGCTTAAGGAATCTCCTGGTTTGGTAATTTCAAATCCTTAAATTCTTTTTGTCAACTCCTTGAACTCTGCATTTGCTTGATAATTCTAACAAAACTGTTGTTGGTTAAATCACGGTTTCGGTTCGTGTATTGTGCTAATGTTTTCATTTGTGGGCTTCTGTCTGCTTCATTTTGGTTCATGTGCTTTTTCTATATGTACTTAATCTAGTCTTTGTACTTAGTTATTGTGTAATTAGGTATTTAACATTTCGATTAGGTTATTGCATTCATAAAACTATAGAAACTAAGATGTGGTAAATTACATGTTACAAAAAGATGTGGTAAATTTAGTCTAAATATAGTATTATTGGAAAGCCTTGAATTTGTTATCTGGTGCTCTAAATGACTAAGCATTGGATTTTGCTTATCTGATATTTCTCTCTAATAATAAATTGCTCTTTCCGTCTGTCCATGGACATAGTTAGCACAGTGTTAGTGAATCACAACATCTATGTATCGATTTTTTCTTCTTTATTTTTTTGCTTGTTGATTTCGCTTTTGTCATAACAAGTTATTGATTTATTTACTTCTGTGCTCATGAAATGAAGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAACCAAGCAACCCGGCTGAATTAGATTCCTTGTTGGGACCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAAAGCTGAACAACCAATGTGTATCTCTGGAGGTTAAGCTAATTCCCTTTTCAAAGCTGCTTGAATTGTTGACATATCAGAAGCTATTTCTATGGAGAAAGAGAGCCAAAATAATTACAAGTTCATTGTGAGTTGAAATGTGCCTAAGCATCTGAACTACATTCTTTCTTGAATGTTTATCCCACTTGAAATTAGTTGAATTTCTATGCCTTATTTTTAGTCATTAATTCTTGAATGTGCTTAATTTGATTTAATTCGTAAGGCTTGCAACTTTAGAATG

mRNA sequence

TCAGGCCATAACTCTTCGTATGATGATGATGATGATATGGAAGAAAAAATAGCGAAAATCACTGGAAGGAAAAAAAAAGATGAAAAAAAGAAAAAAAGCAGTCTATAGATTAGGCAGTCGCTGCCCACCATCCATCGAAGATAAAGCAATGTCGTAAAACAAAAGTTTCAAACATTTCTTTTATTCTTTGCTGTTAGCAAAATAGAGGAGGAAGAACAACGAAAGAGAGCAAATTAAACAAAAACCATGGCTCTTAGAATGTGGGCTTCTTCTACTGCCAATGCACTCAGACTCTCTTCTTCATCTAAAACCTATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCCACTGTTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCTCTGTTGCTACCGTTGGCATCACTGACCATGCTCAGGATCATCTGGGTGAAGTGGTGTTCGTGGATCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACCAGTGATATCAACTCCCCAATCTCTGGTGAGATTGTTGAAGTTAACCCACAGCTTAAGGAATCTCCTGGTTTGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAACCAAGCAACCCGGCTGAATTAGATTCCTTGTTGGGACCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAAAGCTGAACAACCAATGTGTATCTCTGGAGGTTAAGCTAATTCCCTTTTCAAAGCTGCTTGAATTGTTGACATATCAGAAGCTATTTCTATGGAGAAAGAGAGCCAAAATAATTACAAGTTCATTGTGAGTTGAAATGTGCCTAAGCATCTGAACTACATTCTTTCTTGAATGTTTATCCCACTTGAAATTAGTTGAATTTCTATGCCTTATTTTTAGTCATTAATTCTTGAATGTGCTTAATTTGATTTAATTCGTAAGGCTTGCAACTTTAGAATG

Coding sequence (CDS)

ATGGCTCTTAGAATGTGGGCTTCTTCTACTGCCAATGCACTCAGACTCTCTTCTTCATCTAAAACCTATCTCTCTCCTTCATTCTCTCTCTCCAGATGCTTCTCCACTGTTTTGGATGGGCTGAAGTATGCTTCTTCACATGAGTGGGTGAAGCATGAGGGCTCTGTTGCTACCGTTGGCATCACTGACCATGCTCAGGATCATCTGGGTGAAGTGGTGTTCGTGGATCTGCCAGAATCAGGTGGTTCAGTTTCTCAAGGTAAGAGCTTTGGAGCAGTGGAGAGTGTGAAAGCAACCAGTGATATCAACTCCCCAATCTCTGGTGAGATTGTTGAAGTTAACCCACAGCTTAAGGAATCTCCTGGTTTGATCAATTCAAGTCCATATGAAGGGGGATGGATGATAAAAGTGAAACCAAGCAACCCGGCTGAATTAGATTCCTTGTTGGGACCAAAGGAATATACAAAGTTTTGTGAGGAAGAAGATGCAGCCCACTAA

Protein sequence

MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVGITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKESPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH

Homology

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BLAST of CcUC09G175370 vs. NCBI nr
Match: XP_038876916.1 (glycine cleavage system H protein, mitochondrial [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 163/165 (98.79%), Postives = 164/165 (99.39%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALRLSSSSKT+LSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALRLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPAELDSL GPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. NCBI nr
Match: XP_004148493.1 (glycine cleavage system H protein 3, mitochondrial [Cucumis sativus] >KGN60412.1 hypothetical protein Csa_002081 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 161/165 (97.58%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSSSSKT+LSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNP ELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. NCBI nr
Match: XP_008465945.1 (PREDICTED: glycine cleavage system H protein, mitochondrial [Cucumis melo])

HSP 1 Score: 318.5 bits (815), Expect = 3.3e-83
Identity = 160/165 (96.97%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSSSSKT+LSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE+
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNP ELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. NCBI nr
Match: XP_023532627.1 (glycine cleavage system H protein 3, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.8 bits (800), Expect = 1.8e-81
Identity = 156/165 (94.55%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALRLSSSSKT+LSP FS+SRCFSTVLDGLKYASSHEWVKHEG VAT+G
Sbjct: 1   MALRMWASSTANALRLSSSSKTHLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESG  VSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK+S
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDS 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPAELDSL GPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. NCBI nr
Match: XP_022952526.1 (glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata] >XP_022972003.1 glycine cleavage system H protein, mitochondrial-like [Cucurbita maxima] >XP_023553680.1 glycine cleavage system H protein, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 4.0e-81
Identity = 157/165 (95.15%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALRLSS+SKT+LS  FSLSRCFSTVLDGLKYASSHEWVKHEG VATVG
Sbjct: 1   MALRMWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK+S
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDS 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPAELDSL GPKEYTK CEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. ExPASy Swiss-Prot
Match: Q39732 (Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 4.9e-74
Identity = 138/165 (83.64%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALRLSS+++ + SP   LSRCFS+VLDGLKYA+SHEWVKHEGSVAT+G
Sbjct: 1   MALRMWASSTANALRLSSATRPHFSP---LSRCFSSVLDGLKYANSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPE+GGSV++   FGAVESVKATSD+NSPISGEIVEVN +L E+
Sbjct: 61  ITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIKVKPSNP+ELDSL+G KEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDAAH 162

[Close]

BLAST of CcUC09G175370 vs. ExPASy Swiss-Prot
Match: P16048 (Glycine cleavage system H protein, mitochondrial OS=Pisum sativum OX=3888 GN=GDCSH PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 2.5e-73
Identity = 135/165 (81.82%), Postives = 151/165 (91.52%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSSSS+ +LSP+FS+SRCFS VLDGLKYA SHEWVKHEGSVAT+G
Sbjct: 1   MALRMWASSTANALKLSSSSRLHLSPTFSISRCFSNVLDGLKYAPSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFV+LPE G SV++GK FGAVESVKATSD+NSPISGE++EVN  L   
Sbjct: 61  ITDHAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGK 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIK+KP++P EL+SLLG KEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEDGWMIKIKPTSPDELESLLGAKEYTKFCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. ExPASy Swiss-Prot
Match: Q9LQL0 (Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH3 PE=1 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.2e-73
Identity = 137/166 (82.53%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSS-SKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANAL+LSSS SK++L P+FS+SRCFS+VL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GITDHAQDHLGEVVFV+LPE+  SVS+ KSFGAVESVKATS+I SPISGE++EVN +L E
Sbjct: 61  GITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           SPGLINSSPYE GWMIKVKPS+PAEL++L+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of CcUC09G175370 vs. ExPASy Swiss-Prot
Match: P49359 (Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN=GDCSH PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.2e-73
Identity = 136/165 (82.42%), Postives = 153/165 (92.73%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALR+WASSTANALRLSS+++ + SP   LSRCFS+VLDGLKYA+SHEWVKHEGSVAT+G
Sbjct: 1   MALRIWASSTANALRLSSATRPHFSP---LSRCFSSVLDGLKYANSHEWVKHEGSVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPE+GGSV++   FGAVESVKATSD+NSPISGEIVEVN +L E+
Sbjct: 61  ITDHAQDHLGEVVFVDLPEAGGSVTKATGFGAVESVKATSDVNSPISGEIVEVNSKLSET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYE GWMIKVKPSNP+ELDSL+G KEYTKFCEEED+AH
Sbjct: 121 PGLINSSPYEDGWMIKVKPSNPSELDSLMGAKEYTKFCEEEDSAH 162

[Close]

BLAST of CcUC09G175370 vs. ExPASy Swiss-Prot
Match: P25855 (Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=GDH1 PE=1 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 6.0e-72
Identity = 140/166 (84.34%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSS-SKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANAL+LSSS SK++LSP FS SRCFSTVL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSVSKSHLSP-FSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GIT HAQDHLGEVVFV+LPE   SVS+ KSFGAVESVKATS+I SPISGEI+EVN +L E
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           SPGLINSSPYE GWMIKVKPS+PAEL+SL+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. ExPASy TrEMBL
Match: A0A0A0LI67 (Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_3G903520 PE=3 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.2e-84
Identity = 161/165 (97.58%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSSSSKT+LSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNP ELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. ExPASy TrEMBL
Match: A0A1S3CQ17 (Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103503516 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.6e-83
Identity = 160/165 (96.97%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANAL+LSSSSKT+LSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG
Sbjct: 1   MALRMWASSTANALKLSSSSKTHLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESG SVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE+
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGSSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKET 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNP ELDSLLGPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPGELDSLLGPKEYTKFCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. ExPASy TrEMBL
Match: A0A6J1JYK8 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111490918 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 156/165 (94.55%), Postives = 159/165 (96.36%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALRLSSSSKT LSP FS+SRCFSTVLDGLKYASSHEWVKHEG VAT+G
Sbjct: 1   MALRMWASSTANALRLSSSSKTLLSPPFSISRCFSTVLDGLKYASSHEWVKHEGPVATIG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESG  VSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK+S
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGAPVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDS 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPAELDSL GPKEYTKFCEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKFCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. ExPASy TrEMBL
Match: A0A6J1I8M1 (Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111470652 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 157/165 (95.15%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALRLSS+SKT+LS  FSLSRCFSTVLDGLKYASSHEWVKHEG VATVG
Sbjct: 1   MALRMWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK+S
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDS 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPAELDSL GPKEYTK CEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 165

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BLAST of CcUC09G175370 vs. ExPASy TrEMBL
Match: A0A6J1GKG7 (Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111455190 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 1.9e-81
Identity = 157/165 (95.15%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATVG 60
           MALRMWASSTANALRLSS+SKT+LS  FSLSRCFSTVLDGLKYASSHEWVKHEG VATVG
Sbjct: 1   MALRMWASSTANALRLSSASKTHLSSPFSLSRCFSTVLDGLKYASSHEWVKHEGEVATVG 60

Query: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKES 120
           ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLK+S
Sbjct: 61  ITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKDS 120

Query: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           PGLINSSPYEGGWMIKVKPSNPAELDSL GPKEYTK CEEEDAAH
Sbjct: 121 PGLINSSPYEGGWMIKVKPSNPAELDSLFGPKEYTKHCEEEDAAH 165

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BLAST of CcUC09G175370 vs. TAIR 10
Match: AT1G32470.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 275.8 bits (704), Expect = 2.3e-74
Identity = 137/166 (82.53%), Postives = 157/166 (94.58%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSS-SKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANAL+LSSS SK++L P+FS+SRCFS+VL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSASKSHLLPAFSISRCFSSVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GITDHAQDHLGEVVFV+LPE+  SVS+ KSFGAVESVKATS+I SPISGE++EVN +L E
Sbjct: 61  GITDHAQDHLGEVVFVELPEANSSVSKEKSFGAVESVKATSEILSPISGEVIEVNTKLTE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           SPGLINSSPYE GWMIKVKPS+PAEL++L+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELEALMGPKEYTKFCEEEDAAH 166

[Close]

BLAST of CcUC09G175370 vs. TAIR 10
Match: AT2G35370.1 (glycine decarboxylase complex H )

HSP 1 Score: 271.6 bits (693), Expect = 4.3e-73
Identity = 140/166 (84.34%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 1   MALRMWASSTANALRLSSS-SKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MALRMWASSTANAL+LSSS SK++LSP FS SRCFSTVL+GLKYA+SHEWVKHEGSVAT+
Sbjct: 1   MALRMWASSTANALKLSSSVSKSHLSP-FSFSRCFSTVLEGLKYANSHEWVKHEGSVATI 60

Query: 61  GITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GIT HAQDHLGEVVFV+LPE   SVS+ KSFGAVESVKATS+I SPISGEI+EVN +L E
Sbjct: 61  GITAHAQDHLGEVVFVELPEDNTSVSKEKSFGAVESVKATSEILSPISGEIIEVNKKLTE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           SPGLINSSPYE GWMIKVKPS+PAEL+SL+GPKEYTKFCEEEDAAH
Sbjct: 121 SPGLINSSPYEDGWMIKVKPSSPAELESLMGPKEYTKFCEEEDAAH 165

[Close]

BLAST of CcUC09G175370 vs. TAIR 10
Match: AT2G35120.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 3.9e-50
Identity = 102/166 (61.45%), Postives = 126/166 (75.90%), Query Frame = 0


Query: 1   MALRM-WASSTANALRLSSSSKTYLSPSFSLSRCFSTVLDGLKYASSHEWVKHEGSVATV 60
           MA R+ WAS  A+ LR+S + + +           S VL  LKYA SHEWVK +G+ AT 
Sbjct: 1   MACRLFWASRVASHLRISVAQRGF----------SSVVLKDLKYADSHEWVKIDGNKATF 60

Query: 61  GITDHAQDHLGEVVFVDLPESGGSVSQGKSFGAVESVKATSDINSPISGEIVEVNPQLKE 120
           GITDHAQDHLG+VV+V+LP+ G SVSQGKSFGAVESVKATSDINSP+SG++VEVN +L E
Sbjct: 61  GITDHAQDHLGDVVYVELPDVGHSVSQGKSFGAVESVKATSDINSPVSGKVVEVNEELTE 120

Query: 121 SPGLINSSPYEGGWMIKVKPSNPAELDSLLGPKEYTKFCEEEDAAH 166
           SPGL+NSSPYE GW+IKV+ S+  E + L+   +Y+KFCEEEDA H
Sbjct: 121 SPGLVNSSPYEQGWIIKVELSDAGEAEKLMDSDKYSKFCEEEDAKH 156

The following BLAST results are available for this feature:

BLAST of CcUC09G175370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876916.1	1.3e-84	98.79	glycine cleavage system H protein, mitochondrial [Benincasa hispida]	[more]
XP_004148493.1	1.5e-83	97.58	glycine cleavage system H protein 3, mitochondrial [Cucumis sativus] >KGN60412.1...	[more]
XP_008465945.1	3.3e-83	96.97	PREDICTED: glycine cleavage system H protein, mitochondrial [Cucumis melo]	[more]
XP_023532627.1	1.8e-81	94.55	glycine cleavage system H protein 3, mitochondrial-like [Cucurbita pepo subsp. p...	[more]
XP_022952526.1	4.0e-81	95.15	glycine cleavage system H protein, mitochondrial-like [Cucurbita moschata] >XP_0...	[more]

BLAST of CcUC09G175370 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39732	4.9e-74	83.64	Glycine cleavage system H protein, mitochondrial OS=Flaveria anomala OX=35877 GN...	[more]
P16048	2.5e-73	81.82	Glycine cleavage system H protein, mitochondrial OS=Pisum sativum OX=3888 GN=GDC...	[more]
Q9LQL0	3.2e-73	82.53	Glycine cleavage system H protein 3, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]
P49359	3.2e-73	82.42	Glycine cleavage system H protein, mitochondrial OS=Flaveria pringlei OX=4226 GN...	[more]
P25855	6.0e-72	84.34	Glycine cleavage system H protein 1, mitochondrial OS=Arabidopsis thaliana OX=37...	[more]

BLAST of CcUC09G175370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI67	7.2e-84	97.58	Glycine cleavage system H protein OS=Cucumis sativus OX=3659 GN=Csa_3G903520 PE=...	[more]
A0A1S3CQ17	1.6e-83	96.97	Glycine cleavage system H protein OS=Cucumis melo OX=3656 GN=LOC103503516 PE=3 S...	[more]
A0A6J1JYK8	1.9e-81	94.55	Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111490918 PE...	[more]
A0A6J1I8M1	1.9e-81	95.15	Glycine cleavage system H protein OS=Cucurbita maxima OX=3661 GN=LOC111470652 PE...	[more]
A0A6J1GKG7	1.9e-81	95.15	Glycine cleavage system H protein OS=Cucurbita moschata OX=3662 GN=LOC111455190 ...	[more]

BLAST of CcUC09G175370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G32470.1	2.3e-74	82.53	Single hybrid motif superfamily protein	[more]
AT2G35370.1	4.3e-73	84.34	glycine decarboxylase complex H	[more]
AT2G35120.1	3.9e-50	61.45	Single hybrid motif superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017453	Glycine cleavage system H-protein, subgroup	TIGRFAM	TIGR00527	TIGR00527	coord: 39..162 e-value: 2.2E-46 score: 155.1
IPR033753	Glycine cleavage system H-protein/Simiate	PFAM	PF01597	GCV_H	coord: 41..160 e-value: 4.3E-49 score: 165.5
IPR033753	Glycine cleavage system H-protein/Simiate	CDD	cd06848	GCS_H	coord: 43..137 e-value: 2.06421E-51 score: 157.695
None	No IPR available	GENE3D	2.40.50.100		coord: 35..165 e-value: 5.9E-54 score: 183.2
None	No IPR available	PANTHER	PTHR11715:SF32	GLYCINE CLEAVAGE SYSTEM H PROTEIN	coord: 1..165
IPR002930	Glycine cleavage system H-protein	PANTHER	PTHR11715	GLYCINE CLEAVAGE SYSTEM H PROTEIN	coord: 1..165
IPR002930	Glycine cleavage system H-protein	HAMAP	MF_00272	GcvH	coord: 38..159 score: 36.315094
IPR003016	2-oxo acid dehydrogenase, lipoyl-binding site	PROSITE	PS00189	LIPOYL	coord: 81..110
IPR000089	Biotin/lipoyl attachment	PROSITE	PS50968	BIOTINYL_LIPOYL	coord: 56..138 score: 27.729177
IPR011053	Single hybrid motif	SUPERFAMILY	51230	Single hybrid motif	coord: 37..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G175370.1	CcUC09G175370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019464	glycine decarboxylation via glycine cleavage system
biological_process	GO:0009249	protein lipoylation
cellular_component	GO:0005960	glycine cleavage complex
cellular_component	GO:0005739	mitochondrion