CcUC09G162520 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G162520
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 60696 .. 65498 (+)
RNA-Seq ExpressionCcUC09G162520
SyntenyCcUC09G162520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTCCTTTCAGAATCTTTATAAACTTTCTATGTTGCCAGAAACAAGGTTCCGCTAACCTTCTGCCAGCTCCAGTAACTAACTACAAGCCATAATCGACAATGAACAAAGACCTAATACATCACCTCCTTTTATAATCATTTGGTTTTTGAAACTTAAACTTAATTTCTTCACAATTTCTTGAAAAAATTACTGGTTAAAAGTACATAACAAATCAAATAAATTCATAGGTGGGAATAGTGTTTAGAAGGTTAATTTTCAAAAACCAAATAATTACCAAATAAGGCCTAAACTAGTGATCCACTAAACACTATTACATATCTAGTTGGTTTTGCACTTCGACTATTCTCACAAAACAACTGTCTTACGCTATGACTGTAGAAGAAAATCATAAAATATCTAATCCTTAGGTAGATGAATCTACCCACTCATTCCCTGTAAACTCTTTACTACTCATTTAAAGACCATTTAGCCAACCCATAGTGGTTGTTTCTGCCTGTCTTTTATTTAACCTTCCTACCACATCACAGCCCACTGATAGCAAGGGCGGACAAAGGAGAGGGAGGGAGACTACTTACCAGAGTTCCTTTCACGCGAACTAAATGCCGGAGTTAAAATGATCAACGTGGGTCGGTGGTTAAGAGATTTAAACCAGAAGAACAAATAAATGATTATATATATTCCGAAAGAAACAAGATATCTCTCATGTACCGAGCAGATTATAGAGTCTAAAACCAGATGCACTACAAAAATTAAAAAACTGGTATCTATGGCTCTACCGTTGTCACCTGTTGCCAGTCCCCATCAACAGATTCCTTCCACAAAGACACATTGTTGTTCCCATCCGCCACAGCCAAAATGTTTCCAGTCAAAGACCATGAAACCCTCCAGACAGGAGTTTTGAAATCATTCAATATCTTTCCTTCCCATTGATCCCCTTCCCTGGCTACAGTCCATATGATAACTTTTCCATCCTGAGAAGCACTTGCAATAGTAGATTTCGGTAGCCCAAGGTTCGGCGCCCATGCAACATCCCTAACCCAATCAGTATGCATCTGAAGTGCAGGGAAACAGTCCATCTTCCATATTCCATTATATGGTTTCCAAACCTTCACAGTATTATCACAACCACCAGAGCAAAGCTTTAGAACAGGATCAACCAAGCCACAACCAACAAGAGCACCTGGCGCAGATGAAGGGGCCCACGAGACCGATGTGACACCAAGTGGATGAGCTTGGTCAATCCTTGATGTATCCCAACGACCATCCTGCCTTGCAGTGAATACTGAAATATTCCCATCAGAGGAACCACATGCCAAACATAGACCCAATTCATAAGGAGCCCAAGCGATAGAATTAACCGAGGATTTATGATCGTCAAAAACATGGGCTTGAGTCCAGTCATTCTGATTGCCCTCCTTCCATATAATCACACGTCCATCATAAGAACACGAAGCCAGCAGCGACCCGAATTTCGGGTGCGCCCAAGCAGCCTGCCAAACTGGCCCTTGGTGACCCGTAAGCGTAGCTAGATGCTGAGAACCTGAGTTACTGACTCCAATTATCTTAATGGTCTGGTCAGATGAAGCTGTTGCAAGACGCTTGCCATAATAATCCATCGCAGCATCATGGACGGTGTCCTGGTGACCACTTTCTATCTTCTGAGCAGGCATTTCTCTAATACCGATATGTCTTACTCTTTCAGCTACGCTAACAACTGGGATCAATATGAATAACGACTTTCCTCTAACTAGCCCTGGGGAGCAGATACAATTCTTATTACACTGTCTTCTCCAGTCTATCAGATTGCAAAGGGAGACAGAACTTCAAAGCAGATTGAGAAAATTTCTAATCAACCGTGTAAATGATGAGAACAACCCACTCAATAAATAAATTGCTAATGAAAGTCAGGTCTCACAACATTATAGATCTTAATTCTGAGTTTCAGAGGGCATCATTGGAAATAGATGGATCGCGTAAATCAAATTGTAAGAAATTAACAACACATTAACAAAGAAACAAATCTCAGAACTATGACTGAAAGAGCAGAGATAAATTCATGGATCGAAAGACAAGACCCGAAACCCTAGAACAAAAATTAAAAGGTCGGGAGTGGGGAAAAGAGAAAAGGAGCAAACCTCGGATGCGGAGTCGATGGAGCATTCAGGGAGAACAGGTCGCTCTCTTCGTCGGCGCTTAATGAGGAAGAGGAAGAGTGCTGACCCGTTCTCCCAAGAGTTGTATAATTGGGCCTCTATTGGGCTTGGTCCATGTACTTCGGGCCATTTACATGAATATCCATTCACCGGTTTGGTTTCCAAATCTAAATTTATACCAAATACAGAAGATGCGTATAAAAGGTGCTATAAAAGGATAATTTTTATCTTCCCATTTTGTCTCTAGTTTTTAAATAACTTTCTATTTTATCTTTCTTAGATTAGACACTTTTTGAATTTAGTAGGTGTAATTGTTATCGATAACTCTTCAAGATGGGGCATGATTCGTTGTATGTGTTGTCAAGTCCAATAAATACAATTAATATTAAAGGGTTGCAACTATTCAAGTGGAGATGCCTACATATCTAACTTTAGTAGAACATATAATAATCAAATTTTCAAATCTTTTTACAGCATTGTAAGTGAAATTTTAAAATAGAGTTTATAAATTAAAATGTAACACAAAAATTTATAAAGAAAAAATAAATATTAGGGAGACAAAAGTTATTAAAATTTTATATGTGTTTGCACATAATAGGGCCCAATCTAATAAAATTACATAATTTGATAAAATATTAATCCATATACAAAGCTTATACTTCAATTATATGTATTATTATTATTTAAAATACGTCTAACAATCCGAGGATTGCACTATTCACATGAAGGTGATTACATATAATATATAAAAGAAAAATAAATATTTTAGAGACAAAAGTTATTAAAATTTTTAAATCGACAAAAGGAACAACAATTTGAAATATAGATTTTAAAAAAGAGAAACAAAGAGGAAGAAAACTTTTAGAGATAATATAATATTGATAATTAGAGGAAAACATGTTGACAAAAAGACTAAAAAAAGGAAAAAATAAAAATAAATAAATAAACTAGAGAAATGTAAAAGAGATTATCCTAGAATAATAAATCAAAACTAAGTTATTCTTTTATATAATGACATCAAATCTTATTTATACCAATGCATTGATTAGGGATATATTTGAACTTTAGGAGGTAGAGTTACGACATAAATAATTTAATTTATGAGTTTTTTTTTCTTTTTTTTTTACATTGTAGTTTTAGAAAATAAAATATTTGTATATGTTTTAACATATATTTGTATTAAATTTTTTTTAGACCAATTAAATACTACTTTAGAATTTTAAATTAAAAATTTGACATTTACACGTGCGATAAAATGAATATGTGCATTATTAGTAAATAAATAAAAAGAAAAAATTCTATTTTTAATTTCTGAATTTTTGAAAAATATGTGCATTTAGTTTTTGAATTTTTAAAATGTACCTTTTAATCTTTGAGTTTTTAAAAATAGGTTCATTTGGTTATGAATTTTTAAAATATACTTTTTTTTTATTATTAGTCTCTAAAATTTCAAGAACAACAAATAATTATTAAATAATTTGTTATTATTATATGATATTTTAAATTAGAAAAATAATGTTAGAAATTTTTCTAATTTAAGAAAAATACTTTAGTGATTTTTTTAGATGTGTTCTTAAAAACTCAAAACTAAAAGTATGCCTATTTCTAAAAATTCAAAGACTAAAAAGTTACCCTTAAAATTTTTAAGAAACATGCACATATATTATCCCAAACTAGGAGGTCAAAGATATAATTTTCTCATAAATTTAATAATACGTAGTCACAGGTTGTAAAAAAAAATATTTAGTCACATAATAGTGGATGCTTTTATTGATTTTAAGTGACTCGAAAGATCGATAAACTAAGTTGAACAGGTAAGAAAATTGAATTAAAAAAAAAAACATTTTTTTTTCTAAAAAATATTGATAGAAAATTACCTCTCAAAAGCTAATACAAGCTCTCAGTAATCTATGTAGATGGTAAGATGAACAAATTTGAATAGTAGCTAGCGCAGCCTTTCTCCAAGTTGAAGACTAAAGTTGGAATTTGAAGATAAGTAGCATATACAAAATTAAAAAGGTTAAAATGAATTGAACATAAACTTTAAACTTATATCCAACAAATTAATTAATCTTAAAGTATTATAAAATTTGGAATGGTTTATCAGATATAGAAAAAGCAGACCAAACAGAGGTATAACCCAATATATTTTATTGTATTGGATCTAGAGAGAGGTATACGACATTGTGGCATTCTGCAGAGCCTCTAACGTACAGAGAACGTCTCGTTTATACCATCGCCATCACCTCCTCAGAGTTAGGCTTCCCAAATATATCAACTTAATTAATTTTGAGCTTTAAATATTTCTTTTTTGTTCCTATTATTATTGTTGCTATTTTTAGGATTTCAAATTCAAATTCACTGGATTGGACTTATTATCGGCCCATCGTCAGCCCTTTCGCAAGCCTTTCATTTGGAAACAACTCTCGGGCCACCAAGAAGATCGACGCCACGTCATCATCTCGCTGGGCAAAGGCTAGAGGGCCCACAGAAACACATTCTTGAAGTAATCTCGGCAAAAGTGGAGCCCAGCGATATCCTGTCAGGTCATGCCTTGGCTGTCCAATGTCCACTACCACACCCTGGCTGCCCCACCTCATGTCACGTGGCTTCTACATGGCCCCACGTGCTTGTATTTACATGA

mRNA sequence

ATGATTGCAGGGAAACAGTCCATCTTCCATATTCCATTATATGGTTTCCAAACCTTCACAGTATTATCACAACCACCAGAGCAAAGCTTTAGAACAGGATCAACCAAGCCACAACCAACAAGAGCACCTGGCGCAGATGAAGGGGCCCACGAGACCGATATGAAGCTGTTGCAAGACGCTTGCCATAATAATCCATCGCAGCATCATGGACGGTGTCCTGCTACGCTAACAACTGGGATCAATATGAATAACGACTTTCCTCTAACTAGCCCTGGGGAGCAGATACAATTCTTATTACACTGTCTTCTCCAGTCTATCAGATTGCAAAGGGAGACAGAACTTCAAAGCAGATTGAGAAAATTTCTAATCAACCGTACCCGAAACCCTAGAACAAAAATTAAAAGGTCGGGAGTGGGGAAAAGAGAAAAGGAGCAAACCTCGGATGCGGAGTCGATGGAGCATTCAGGGAGAACAGGTCGCTCTCTTCGTCGGCGCTTAATGAGGAAGAGGAAGAGTGCTGACCCGTTCTCCCAAGAGTTGTATAATTGGGCCTCTATTGGGCTTGGATTTCAAATTCAAATTCACTGGATTGGACTTATTATCGGCCCATCGTCAGCCCTTTCGCAAGCCTTTCATTTGGAAACAACTCTCGGGCCACCAAGAAGATCGACGCCACGTCATCATCTCGCTGGGCAAAGGCTAGAGGGCCCACAGAAACACATTCTTGAAGTAATCTCGGCAAAAGTGGAGCCCAGCGATATCCTGTCAGGTCATGCCTTGGCTGTCCAATGTCCACTACCACACCCTGGCTGCCCCACCTCATGTCACGTGGCTTCTACATGGCCCCACGTGCTTGTATTTACATGA

Coding sequence (CDS)

ATGATTGCAGGGAAACAGTCCATCTTCCATATTCCATTATATGGTTTCCAAACCTTCACAGTATTATCACAACCACCAGAGCAAAGCTTTAGAACAGGATCAACCAAGCCACAACCAACAAGAGCACCTGGCGCAGATGAAGGGGCCCACGAGACCGATATGAAGCTGTTGCAAGACGCTTGCCATAATAATCCATCGCAGCATCATGGACGGTGTCCTGCTACGCTAACAACTGGGATCAATATGAATAACGACTTTCCTCTAACTAGCCCTGGGGAGCAGATACAATTCTTATTACACTGTCTTCTCCAGTCTATCAGATTGCAAAGGGAGACAGAACTTCAAAGCAGATTGAGAAAATTTCTAATCAACCGTACCCGAAACCCTAGAACAAAAATTAAAAGGTCGGGAGTGGGGAAAAGAGAAAAGGAGCAAACCTCGGATGCGGAGTCGATGGAGCATTCAGGGAGAACAGGTCGCTCTCTTCGTCGGCGCTTAATGAGGAAGAGGAAGAGTGCTGACCCGTTCTCCCAAGAGTTGTATAATTGGGCCTCTATTGGGCTTGGATTTCAAATTCAAATTCACTGGATTGGACTTATTATCGGCCCATCGTCAGCCCTTTCGCAAGCCTTTCATTTGGAAACAACTCTCGGGCCACCAAGAAGATCGACGCCACGTCATCATCTCGCTGGGCAAAGGCTAGAGGGCCCACAGAAACACATTCTTGAAGTAATCTCGGCAAAAGTGGAGCCCAGCGATATCCTGTCAGGTCATGCCTTGGCTGTCCAATGTCCACTACCACACCCTGGCTGCCCCACCTCATGTCACGTGGCTTCTACATGGCCCCACGTGCTTGTATTTACATGA

Protein sequence

MIAGKQSIFHIPLYGFQTFTVLSQPPEQSFRTGSTKPQPTRAPGADEGAHETDMKLLQDACHNNPSQHHGRCPATLTTGINMNNDFPLTSPGEQIQFLLHCLLQSIRLQRETELQSRLRKFLINRTRNPRTKIKRSGVGKREKEQTSDAESMEHSGRTGRSLRRRLMRKRKSADPFSQELYNWASIGLGFQIQIHWIGLIIGPSSALSQAFHLETTLGPPRRSTPRHHLAGQRLEGPQKHILEVISAKVEPSDILSGHALAVQCPLPHPGCPTSCHVASTWPHVLVFT
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G162520.1CcUC09G162520.1mRNA