CcUC08G159260 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATATAAAGGCCTCATCGTTGAAAAGAACTTCATGTAAAAGCTTTCTTTCGCTCCTTTTTTGTGAACCTAAACTTCTGTAGCAGAGAAATGGGCTCTCTAATGGGCGGATGGAACTCTCCCGTTCTTGATCCTAAATCAGGTAATTGAAGCGAGTTTTGTTCGTATTTTTTCATTGATTTGTGAATGATTCATCACATTATGTACTATTTTTGTTATGGAGGTTAGTTAAATCATGTATATTAACTTCGAAATTTCAGTCAAGTTCAAGAGAAACCGGTCGCTTACGAAAGAGGAAATCGAAGCTTACTGGAGATCGAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGGTTTCTATGCCGGCGGATCGTTTTGTTGATCGCGAAACAGTCGGAATAGGCTACAAAAGATCGAGTTCGTTTCCGCCGGCCAAGGACGTTGCGGCGGAAGCAGAAATTTCACAGAACGATTTGGAGAGGGAAAACCTAGAGAAATTGAAGAAAATTGGCTGGTAAATTGAAATCGCGTAATAGTTAACTACTTGATCGCGGATCTTAGTGCTTGAAATTTATATGAACGAAAATAATGAATTAGCAGAGTTCATGTGTGCGGTTGTTTAATTCTCTGTTTTTTGTGCAGGTGGACGAGGAGTAATTCGGCGTTTCTGAATGAACCGCCAGTCCTCGACGGCGCTACAAAAGCTTACGCGTCGTTGTACGGCGTCTCCGACGTGGCCTCGTGTAAGTTGAATCACAGCAATGGAGTCGGTGCTTAGTTACACTGAAACTGCGTGAAAAAGAAAAGAGAAGTTAAGATAAGAATATCAGTCCGTTATGTAAAATTAATATATTATAAATATGTTATATTATATACATATTGTAAGATTTCAGTTCTTTCTGGTTTGTAATTTGGGATTTGAAACTCTAATTT ATATAAAGGCCTCATCGTTGAAAAGAACTTCATGTAAAAGCTTTCTTTCGCTCCTTTTTTGTGAACCTAAACTTCTGTAGCAGAGAAATGGGCTCTCTAATGGGCGGATGGAACTCTCCCGTTCTTGATCCTAAATCAGTCAAGTTCAAGAGAAACCGGTCGCTTACGAAAGAGGAAATCGAAGCTTACTGGAGATCGAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGGTTTCTATGCCGGCGGATCGTTTTGTTGATCGCGAAACAGTCGGAATAGGCTACAAAAGATCGAGTTCGTTTCCGCCGGCCAAGGACGTTGCGGCGGAAGCAGAAATTTCACAGAACGATTTGGAGAGGGAAAACCTAGAGAAATTGAAGAAAATTGGCTGGTGGACGAGGAGTAATTCGGCGTTTCTGAATGAACCGCCAGTCCTCGACGGCGCTACAAAAGCTTACGCGTCGTTGTACGGCGTCTCCGACGTGGCCTCGTGTAAGTTGAATCACAGCAATGGAGTCGGTGCTTAGTTACACTGAAACTGCGTGAAAAAGAAAAGAGAAGTTAAGATAAGAATATCAGTCCGTTATGTAAAATTAATATATTATAAATATGTTATATTATATACATATTGTAAGATTTCAGTTCTTTCTGGTTTGTAATTTGGGATTTGAAACTCTAATTT ATGGGCTCTCTAATGGGCGGATGGAACTCTCCCGTTCTTGATCCTAAATCAGTCAAGTTCAAGAGAAACCGGTCGCTTACGAAAGAGGAAATCGAAGCTTACTGGAGATCGAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGGTTTCTATGCCGGCGGATCGTTTTGTTGATCGCGAAACAGTCGGAATAGGCTACAAAAGATCGAGTTCGTTTCCGCCGGCCAAGGACGTTGCGGCGGAAGCAGAAATTTCACAGAACGATTTGGAGAGGGAAAACCTAGAGAAATTGAAGAAAATTGGCTGGTGGACGAGGAGTAATTCGGCGTTTCTGAATGAACCGCCAGTCCTCGACGGCGCTACAAAAGCTTACGCGTCGTTGTACGGCGTCTCCGACGTGGCCTCGTGTAAGTTGAATCACAGCAATGGAGTCGGTGCTTAG MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAVSMPADRFVDRETVGIGYKRSSSFPPAKDVAAEAEISQNDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGATKAYASLYGVSDVASCKLNHSNGVGA Homology
BLAST of CcUC08G159260 vs. NCBI nr
Match: XP_038886573.1 (uncharacterized protein LOC120076743 [Benincasa hispida]) HSP 1 Score: 272.7 bits (696), Expect = 1.8e-69 Identity = 129/146 (88.36%), Postives = 140/146 (95.89%), Query Frame = 0
BLAST of CcUC08G159260 vs. NCBI nr
Match: XP_008444729.1 (PREDICTED: uncharacterized protein LOC103487979 [Cucumis melo] >KAA0065224.1 putative DNA polymerase epsilon catalytic subunit A [Cucumis melo var. makuwa]) HSP 1 Score: 248.1 bits (632), Expect = 4.8e-62 Identity = 118/146 (80.82%), Postives = 136/146 (93.15%), Query Frame = 0
BLAST of CcUC08G159260 vs. NCBI nr
Match: XP_004152691.1 (uncharacterized protein LOC101215562 [Cucumis sativus] >KGN62611.1 hypothetical protein Csa_022203 [Cucumis sativus]) HSP 1 Score: 247.7 bits (631), Expect = 6.3e-62 Identity = 122/147 (82.99%), Postives = 134/147 (91.16%), Query Frame = 0
BLAST of CcUC08G159260 vs. NCBI nr
Match: XP_022144322.1 (uncharacterized protein LOC111014033 [Momordica charantia]) HSP 1 Score: 220.7 bits (561), Expect = 8.3e-54 Identity = 111/146 (76.03%), Postives = 119/146 (81.51%), Query Frame = 0
BLAST of CcUC08G159260 vs. NCBI nr
Match: XP_023002545.1 (uncharacterized protein LOC111496358 [Cucurbita maxima]) HSP 1 Score: 216.9 bits (551), Expect = 1.2e-52 Identity = 109/135 (80.74%), Postives = 118/135 (87.41%), Query Frame = 0
BLAST of CcUC08G159260 vs. ExPASy TrEMBL
Match: A0A5A7VD66 (Putative DNA polymerase epsilon catalytic subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005630 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62 Identity = 118/146 (80.82%), Postives = 136/146 (93.15%), Query Frame = 0
BLAST of CcUC08G159260 vs. ExPASy TrEMBL
Match: A0A1S3BBS7 (uncharacterized protein LOC103487979 OS=Cucumis melo OX=3656 GN=LOC103487979 PE=4 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62 Identity = 118/146 (80.82%), Postives = 136/146 (93.15%), Query Frame = 0
BLAST of CcUC08G159260 vs. ExPASy TrEMBL
Match: A0A0A0LRI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361750 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.1e-62 Identity = 122/147 (82.99%), Postives = 134/147 (91.16%), Query Frame = 0
BLAST of CcUC08G159260 vs. ExPASy TrEMBL
Match: A0A6J1CTD0 (uncharacterized protein LOC111014033 OS=Momordica charantia OX=3673 GN=LOC111014033 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 4.0e-54 Identity = 111/146 (76.03%), Postives = 119/146 (81.51%), Query Frame = 0
BLAST of CcUC08G159260 vs. ExPASy TrEMBL
Match: A0A6J1KP90 (uncharacterized protein LOC111496358 OS=Cucurbita maxima OX=3661 GN=LOC111496358 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 5.8e-53 Identity = 109/135 (80.74%), Postives = 118/135 (87.41%), Query Frame = 0
BLAST of CcUC08G159260 vs. TAIR 10
Match: AT1G19530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 4.0e-14 Identity = 50/135 (37.04%), Postives = 76/135 (56.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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