CcUC08G158060 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCTTACACCTCCGCAACTGTTGGCCTACAATGGCACCGACCCATCGAAGCCCATCTATGTTGCTTTGAAGGGCCAAATTTATGACGTCACAACAGGCGTTGCTTTCTACGGCCCCTGTGGCCCTTACGCCATGTTCGCCGGCAAGGACGCGAGCAGAGCTCTGGCTAAGATGACCAAGAACGAGGAGGACATCACCCCTTCGCTCGAAGGCCTCTCTGAGAAAGAGATCGGTGTTCTCAACGATTGGGAGAAGAAATTTCAAGCTAAGTACCCTGTTGTTGGCCGTGTTGTTTCTTAA ATGGAGCTTACACCTCCGCAACTGTTGGCCTACAATGGCACCGACCCATCGAAGCCCATCTATGTTGCTTTGAAGGGCCAAATTTATGACGTCACAACAGGCGTTGCTTTCTACGGCCCCTGTGGCCCTTACGCCATGTTCGCCGGCAAGGACGCGAGCAGAGCTCTGGCTAAGATGACCAAGAACGAGGAGGACATCACCCCTTCGCTCGAAGGCCTCTCTGAGAAAGAGATCGGTGTTCTCAACGATTGGGAGAAGAAATTTCAAGCTAAGTACCCTGTTGTTGGCCGTGTTGTTTCTTAA ATGGAGCTTACACCTCCGCAACTGTTGGCCTACAATGGCACCGACCCATCGAAGCCCATCTATGTTGCTTTGAAGGGCCAAATTTATGACGTCACAACAGGCGTTGCTTTCTACGGCCCCTGTGGCCCTTACGCCATGTTCGCCGGCAAGGACGCGAGCAGAGCTCTGGCTAAGATGACCAAGAACGAGGAGGACATCACCCCTTCGCTCGAAGGCCTCTCTGAGAAAGAGATCGGTGTTCTCAACGATTGGGAGAAGAAATTTCAAGCTAAGTACCCTGTTGTTGGCCGTGTTGTTTCTTAA MELTPPQLLAYNGTDPSKPIYVALKGQIYDVTTGVAFYGPCGPYAMFAGKDASRALAKMTKNEEDITPSLEGLSEKEIGVLNDWEKKFQAKYPVVGRVVS Homology
BLAST of CcUC08G158060 vs. NCBI nr
Match: XP_038885033.1 (probable steroid-binding protein 3 [Benincasa hispida]) HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44 Identity = 92/100 (92.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. NCBI nr
Match: XP_008445274.1 (PREDICTED: probable steroid-binding protein 3 [Cucumis melo] >KAA0064879.1 putative steroid-binding protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 188.7 bits (478), Expect = 2.4e-44 Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. NCBI nr
Match: XP_022997574.1 (probable steroid-binding protein 3 [Cucurbita maxima]) HSP 1 Score: 186.0 bits (471), Expect = 1.5e-43 Identity = 89/100 (89.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. NCBI nr
Match: XP_022962142.1 (probable steroid-binding protein 3 [Cucurbita moschata] >KAG6598539.1 putative steroid-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029471.1 putative steroid-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42 Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. NCBI nr
Match: XP_023547192.1 (probable steroid-binding protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 181.0 bits (458), Expect = 5.0e-42 Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. ExPASy Swiss-Prot
Match: Q9SK39 (Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 1.2e-38 Identity = 75/100 (75.00%), Postives = 86/100 (86.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. ExPASy Swiss-Prot
Match: Q9FVZ9 (Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP2 PE=2 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 1.4e-26 Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 0
BLAST of CcUC08G158060 vs. ExPASy Swiss-Prot
Match: Q9XFM6 (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MSBP1 PE=1 SV=2) HSP 1 Score: 115.9 bits (289), Expect = 2.6e-25 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of CcUC08G158060 vs. ExPASy Swiss-Prot
Match: Q9FVZ7 (Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP1 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 3.4e-25 Identity = 54/97 (55.67%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of CcUC08G158060 vs. ExPASy Swiss-Prot
Match: Q9M2Z4 (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.3e-24 Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of CcUC08G158060 vs. ExPASy TrEMBL
Match: A0A5A7VHD3 (Putative steroid-binding protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001920 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44 Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. ExPASy TrEMBL
Match: A0A1S3BD16 (probable steroid-binding protein 3 OS=Cucumis melo OX=3656 GN=LOC103488356 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.2e-44 Identity = 91/100 (91.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. ExPASy TrEMBL
Match: A0A6J1KBX0 (probable steroid-binding protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111492464 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 7.5e-44 Identity = 89/100 (89.00%), Postives = 95/100 (95.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. ExPASy TrEMBL
Match: A0A6J1HBX6 (probable steroid-binding protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111462683 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 6.3e-43 Identity = 88/100 (88.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. ExPASy TrEMBL
Match: A0A0A0LQG3 (Cytochrome b5 heme-binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382750 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 9.1e-42 Identity = 87/100 (87.00%), Postives = 92/100 (92.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. TAIR 10
Match: AT2G24940.1 (membrane-associated progesterone binding protein 2 ) HSP 1 Score: 160.2 bits (404), Expect = 8.5e-40 Identity = 75/100 (75.00%), Postives = 86/100 (86.00%), Query Frame = 0
BLAST of CcUC08G158060 vs. TAIR 10
Match: AT5G52240.1 (membrane steroid binding protein 1 ) HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of CcUC08G158060 vs. TAIR 10
Match: AT5G52240.2 (membrane steroid binding protein 1 ) HSP 1 Score: 115.9 bits (289), Expect = 1.8e-26 Identity = 55/97 (56.70%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of CcUC08G158060 vs. TAIR 10
Match: AT3G48890.1 (membrane-associated progesterone binding protein 3 ) HSP 1 Score: 113.6 bits (283), Expect = 9.1e-26 Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of CcUC08G158060 vs. TAIR 10
Match: AT4G14965.1 (membrane-associated progesterone binding protein 4 ) HSP 1 Score: 78.6 bits (192), Expect = 3.2e-15 Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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