CcUC08G156280 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAACAATCACCGCCGCCGTCAAAATGGGAGGGAGAAGTCTCCGCCGAGACAACCGCCGGAAGTCCCAACGAAATTTGGCCGCTGCTGGCCGACGACTTCTGCAGCCTCCACAAATGGCTTCCGATCGACACGTGTCACCACGTGGAGGGCGTACCGGGGCAGCCGGGCCTAATCCGGTACTGCGCCTCCACCGACACGATGTTGTCGCCGGAGCCGTCGATCAAGTGGGCCCATGAGAGGCTGAATCAGATTGATCCGACCAAACATATTCTCAGCTACGAGATCCTCGAGAACAACATCGGCTTCAAGTCTTATGTGGCCACCATGAAGCTGCTGCCGGGCGGCGGCGGAGGGTGCAAGATCGTGTGGTCGTTCGTGGCGGATCCAATTGAAGGGTGGCCGCTGGAGGAGTTTATGAAGTATCTTGATTTTTCTCTGCAGCATATGGCGAACAAAATGGATGATTTTTTGCAGAAAAGTCCCTGA ATGGAAGAACAATCACCGCCGCCGTCAAAATGGGAGGGAGAAGTCTCCGCCGAGACAACCGCCGGAAGTCCCAACGAAATTTGGCCGCTGCTGGCCGACGACTTCTGCAGCCTCCACAAATGGCTTCCGATCGACACGTGTCACCACGTGGAGGGCGTACCGGGGCAGCCGGGCCTAATCCGGTACTGCGCCTCCACCGACACGATGTTGTCGCCGGAGCCGTCGATCAAGTGGGCCCATGAGAGGCTGAATCAGATTGATCCGACCAAACATATTCTCAGCTACGAGATCCTCGAGAACAACATCGGCTTCAAGTCTTATGTGGCCACCATGAAGCTGCTGCCGGGCGGCGGCGGAGGGTGCAAGATCGTGTGGTCGTTCGTGGCGGATCCAATTGAAGGGTGGCCGCTGGAGGAGTTTATGAAGTATCTTGATTTTTCTCTGCAGCATATGGCGAACAAAATGGATGATTTTTTGCAGAAAAGTCCCTGA ATGGAAGAACAATCACCGCCGCCGTCAAAATGGGAGGGAGAAGTCTCCGCCGAGACAACCGCCGGAAGTCCCAACGAAATTTGGCCGCTGCTGGCCGACGACTTCTGCAGCCTCCACAAATGGCTTCCGATCGACACGTGTCACCACGTGGAGGGCGTACCGGGGCAGCCGGGCCTAATCCGGTACTGCGCCTCCACCGACACGATGTTGTCGCCGGAGCCGTCGATCAAGTGGGCCCATGAGAGGCTGAATCAGATTGATCCGACCAAACATATTCTCAGCTACGAGATCCTCGAGAACAACATCGGCTTCAAGTCTTATGTGGCCACCATGAAGCTGCTGCCGGGCGGCGGCGGAGGGTGCAAGATCGTGTGGTCGTTCGTGGCGGATCCAATTGAAGGGTGGCCGCTGGAGGAGTTTATGAAGTATCTTGATTTTTCTCTGCAGCATATGGCGAACAAAATGGATGATTTTTTGCAGAAAAGTCCCTGA MEEQSPPPSKWEGEVSAETTAGSPNEIWPLLADDFCSLHKWLPIDTCHHVEGVPGQPGLIRYCASTDTMLSPEPSIKWAHERLNQIDPTKHILSYEILENNIGFKSYVATMKLLPGGGGGCKIVWSFVADPIEGWPLEEFMKYLDFSLQHMANKMDDFLQKSP Homology
BLAST of CcUC08G156280 vs. NCBI nr
Match: XP_038886052.1 (lachrymatory-factor synthase-like [Benincasa hispida]) HSP 1 Score: 305.8 bits (782), Expect = 2.2e-79 Identity = 143/167 (85.63%), Postives = 151/167 (90.42%), Query Frame = 0
BLAST of CcUC08G156280 vs. NCBI nr
Match: XP_022961689.1 (lachrymatory-factor synthase-like [Cucurbita moschata]) HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77 Identity = 138/166 (83.13%), Postives = 150/166 (90.36%), Query Frame = 0
BLAST of CcUC08G156280 vs. NCBI nr
Match: KAG6598772.1 (Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029711.1 Lachrymatory-factor synthase, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 300.1 bits (767), Expect = 1.2e-77 Identity = 138/166 (83.13%), Postives = 150/166 (90.36%), Query Frame = 0
BLAST of CcUC08G156280 vs. NCBI nr
Match: XP_023547300.1 (lachrymatory-factor synthase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 298.5 bits (763), Expect = 3.5e-77 Identity = 137/166 (82.53%), Postives = 149/166 (89.76%), Query Frame = 0
BLAST of CcUC08G156280 vs. NCBI nr
Match: XP_022996730.1 (lachrymatory-factor synthase-like [Cucurbita maxima]) HSP 1 Score: 297.0 bits (759), Expect = 1.0e-76 Identity = 137/166 (82.53%), Postives = 149/166 (89.76%), Query Frame = 0
BLAST of CcUC08G156280 vs. ExPASy TrEMBL
Match: A0A6J1HER8 (lachrymatory-factor synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111462382 PE=3 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 5.8e-78 Identity = 138/166 (83.13%), Postives = 150/166 (90.36%), Query Frame = 0
BLAST of CcUC08G156280 vs. ExPASy TrEMBL
Match: A0A6J1K7L1 (lachrymatory-factor synthase-like OS=Cucurbita maxima OX=3661 GN=LOC111491885 PE=3 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 4.9e-77 Identity = 137/166 (82.53%), Postives = 149/166 (89.76%), Query Frame = 0
BLAST of CcUC08G156280 vs. ExPASy TrEMBL
Match: A0A5A7VDC6 (Lachrymatory-factor synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003750 PE=3 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 4.9e-69 Identity = 127/163 (77.91%), Postives = 136/163 (83.44%), Query Frame = 0
BLAST of CcUC08G156280 vs. ExPASy TrEMBL
Match: A0A1S3BCJ7 (lachrymatory-factor synthase OS=Cucumis melo OX=3656 GN=LOC103488174 PE=3 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 4.9e-69 Identity = 127/163 (77.91%), Postives = 136/163 (83.44%), Query Frame = 0
BLAST of CcUC08G156280 vs. ExPASy TrEMBL
Match: A0A6J1BR63 (lachrymatory-factor synthase-like OS=Momordica charantia OX=3673 GN=LOC111004959 PE=3 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 6.4e-69 Identity = 124/163 (76.07%), Postives = 138/163 (84.66%), Query Frame = 0
BLAST of CcUC08G156280 vs. TAIR 10
Match: AT4G32870.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 160.6 bits (405), Expect = 1.1e-39 Identity = 74/150 (49.33%), Postives = 103/150 (68.67%), Query Frame = 0
BLAST of CcUC08G156280 vs. TAIR 10
Match: AT2G25770.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 138.3 bits (347), Expect = 5.6e-33 Identity = 64/157 (40.76%), Postives = 97/157 (61.78%), Query Frame = 0
BLAST of CcUC08G156280 vs. TAIR 10
Match: AT2G25770.2 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 138.3 bits (347), Expect = 5.6e-33 Identity = 64/157 (40.76%), Postives = 97/157 (61.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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