CcUC08G154910 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGAACGGGCCTCTCTCTTTTTGTCATCGATTGGATTGCTTGGAGAGTATTGTCCTACGTCTAGGAAAAAGATCAGTTGTGCTGAGACTATTGGCTGCATGCATCTTGAGTTGCTTGGAGGTCATAGAAAAGCACGTGATCTCGGTTTCCATTTTATGCGGCCTTTCCCAGCTGCTCAAGGAGCGTTAGGACCTTGTGAAGATACTGCTACTGCTACTGCTACCCATCTTTTCTAA ATGTCTGAACGGGCCTCTCTCTTTTTGTCATCGATTGGATTGCTTGGAGAGTATTGTCCTACGTCTAGGAAAAAGATCAGTTGTGCTGAGACTATTGGCTGCATGCATCTTGAGTTGCTTGGAGGTCATAGAAAAGCACGTGATCTCGGTTTCCATTTTATGCGGCCTTTCCCAGCTGCTCAAGGAGCGTTAGGACCTTGTGAAGATACTGCTACTGCTACTGCTACCCATCTTTTCTAA ATGTCTGAACGGGCCTCTCTCTTTTTGTCATCGATTGGATTGCTTGGAGAGTATTGTCCTACGTCTAGGAAAAAGATCAGTTGTGCTGAGACTATTGGCTGCATGCATCTTGAGTTGCTTGGAGGTCATAGAAAAGCACGTGATCTCGGTTTCCATTTTATGCGGCCTTTCCCAGCTGCTCAAGGAGCGTTAGGACCTTGTGAAGATACTGCTACTGCTACTGCTACCCATCTTTTCTAA MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGGHRKARDLGFHFMRPFPAAQGALGPCEDTATATATHLF Homology
BLAST of CcUC08G154910 vs. NCBI nr
Match: KAA0064818.1 (ATP synthase subunit alpha [Cucumis melo var. makuwa]) HSP 1 Score: 133.7 bits (335), Expect = 7.2e-28 Identity = 66/74 (89.19%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CcUC08G154910 vs. NCBI nr
Match: KAG7020201.1 (Eukaryotic translation initiation factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 87.8 bits (216), Expect = 4.5e-14 Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of CcUC08G154910 vs. NCBI nr
Match: KAG6585281.1 (Eukaryotic translation initiation factor 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 86.3 bits (212), Expect = 1.3e-13 Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 0
BLAST of CcUC08G154910 vs. NCBI nr
Match: EXB60481.1 (hypothetical protein L484_014936 [Morus notabilis]) HSP 1 Score: 77.0 bits (188), Expect = 8.0e-11 Identity = 41/61 (67.21%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of CcUC08G154910 vs. NCBI nr
Match: PPD71333.1 (hypothetical protein GOBAR_DD31780 [Gossypium barbadense]) HSP 1 Score: 70.5 bits (171), Expect = 7.5e-09 Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of CcUC08G154910 vs. ExPASy TrEMBL
Match: A0A5A7VB37 (ATP synthase subunit alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001260 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 3.5e-28 Identity = 66/74 (89.19%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of CcUC08G154910 vs. ExPASy TrEMBL
Match: W9QZ52 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_014936 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.9e-11 Identity = 41/61 (67.21%), Postives = 46/61 (75.41%), Query Frame = 0
BLAST of CcUC08G154910 vs. ExPASy TrEMBL
Match: A0A5D2L037 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D05G254800v1 PE=4 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.6e-09 Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of CcUC08G154910 vs. ExPASy TrEMBL
Match: A0A7J8XXW1 (W2 domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_009501 PE=3 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.6e-09 Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of CcUC08G154910 vs. ExPASy TrEMBL
Match: A0A7J9HFE2 (W2 domain-containing protein OS=Gossypium harknessii OX=34285 GN=Gohar_024121 PE=3 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.6e-09 Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of CcUC08G154910 vs. TAIR 10
Match: AT1G36732.1 (conserved peptide upstream open reading frame 19 ) HSP 1 Score: 46.6 bits (109), Expect = 1.1e-05 Identity = 29/59 (49.15%), Postives = 34/59 (57.63%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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