CcUC08G154510 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G154510
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	peptidyl-prolyl cis-trans isomerase E
Location	CicolChr08: 22815330 .. 22817497 (+)
RNA-Seq Expression	CcUC08G154510
Synteny	CcUC08G154510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGAGAAGAAGAAGACGAAGAAGAAAGAAAGAAAGAGAGAGCTCTAATGGCGCAGGCTGTTCAGAAAAACACTCTGTACGTCGGTGGTTTGGCGGAGGAGGTGAACGAGTCTATTCTACACGCAGCCTTCATTCCCTTCGGCGAGATCAAAGACGTCAAGACTCCATTGGATCAAGCCACTCAAAAGCATCGTTCCTTCGGCTTCGTCACTTTCTTGGAAAAGGAAGACGCATCCGCCGCCATGGATAATATGGACGGTGCTGAGCTCTATGGTCGTGTGCTTACTGTCAATTATGCCCTCCCTGAGCGTATCAAGGGTGGTGAACAAGGATGGGCCGCTCAGCCTAGTAAGTTTCCCCATTCCTTAAACCCTAATTCTTTTCGTCTATTCATTCCCTGCATTTCAAATTTCTTTTGTGTTGCATCTCATTGTCCATTGCTAAATTTTCATTTATGCAATCTATTCGGTTGCAATGGATATGATACTAGTTGGCTGCTTAGGTGAACTTGTGTATGTTCTTAATCTTTAATTTTCATTATTTCAATTTTAAATGTTTTGTTAGTGCAATAAAAAATTCAGACCAGATGATCTCTAATTTGATGTCAAATCAAATGCATGTATCCTAAAGCACGAGTCTGGATGCAATACAGAAGTTTAAAAAACAAAGAATGAAATTGGGTTTTATCCAAACATCAGAGAAGAAACCAAAGCTAATAATATAGAAACTACAGTTTGGTAAAGGTTAGAGTCAAAATTAGATTTAAACATTTAAATCGTTTCTGGTCCCAAACCTTAGGACTTGATATGAACATGATATGTTCAAAATCTGTAAATGCAAACTCTGGCAGTTATACTTATGCTGCCAGAATGAGATCAAACCATATGATATAATCAATTTTTAACAATCGAAGTTTCATTGTGAAGAAATGAAAGAGTTTGGACGAGGTTAATTTCAGAGGCTAGTTTGCAGTTAATTAAGGAGATCAGTTTCCGTAGGACAAGATTTAGAGAGGGTCATTTTAGGATTTATTTAGCTTATGGCTGCGTGTCTAAATCTCCTGCTTTGGATGTTGATTTTGTTCAGTTTTGAATGAGTATTGGAATCTATGGAATTAGCATGCTGATCCATTCCTGCCAACATGAGCCTAGTTTAGTAGTTAAGGCATCGACTCCCTGTCTTGGAGTTTGAAGTTCAAATTCTCACTCCTCCATATTTGTCATAGTCTGTATATAACAAATTTTATTCCATTTCCTTGACGGTTCATTTATTTCTCCTTTACCCATTATTCTTGTGACCTTCGACATCATCACGACTTGTTCTGCATCTTTTGTGAGTTGGGAATTGAGTGCATAATGCTTTACGACATGATTATTACCAAGTGGCTGGTCTAGTCTGATTGTCTCAACTCCTTGGAGTTGTCTTCTTAGAACTCAAGCACACAATTGTACAACCTATAGAGCAGATCCTGTTCAAGTTAGGTCATGTCTCAACTCCTTGGTGTTCAGACTGCATCTTGGCAATTGTGAATTATTGACTGGTGTAAAGGTCTGTGCTAACTAGAAATCTAGAATCAGTAGCCTTGTTCACTTCTCACTAATGGTTGTATACTTTGTCTTCCATCAATCATTTACCATTTCACCGGACAATGTCGACGATTGGATTGTATTGCTTTGCAATAATGATGTTGCCAATGGGTCGAGTGAGTGATATCCTAATAAATGGTTTCATTTAATATTCTAGTTTGGGCGGATGCGGATACGTGGTTTGAAAGGCAGCAACAAGAGGAGGAAATGCAGCGCATTCAAGCTGAGAATCGAGCGGCTATGGAGGCTGCGGAGGAGCTGCACAGGAAGAAGCTAGCCCAGGAACGGGAAGGGGAAAAAGACGAGGAGGTAGACACCAAGGATCCCATGGCTAAGGCTGAAGCTGAGGTTTTAAGACAGAACAGTTAAAGAGATGGAATTGATTGAGATTCGAACTTGCTTCTTCAATCCAAGTGAAAGAAGAGTGAAAGGCAGAGCATTGAAAACCTGCCATCTGAGCTTGCTCTTCACAATGACACATTCTTATTGGATTATTAGCAATTCATAGTTTGATAAGCTGAAAAATGTTTACCTTTCCTGAAAACTTGTAATTTTATTCAAAGAAGAGCTCAGGAGTAGGAGT

mRNA sequence

CGGAGAAGAAGAAGACGAAGAAGAAAGAAAGAAAGAGAGAGCTCTAATGGCGCAGGCTGTTCAGAAAAACACTCTGTACGTCGGTGGTTTGGCGGAGGAGGTGAACGAGTCTATTCTACACGCAGCCTTCATTCCCTTCGGCGAGATCAAAGACGTCAAGACTCCATTGGATCAAGCCACTCAAAAGCATCGTTCCTTCGGCTTCGTCACTTTCTTGGAAAAGGAAGACGCATCCGCCGCCATGGATAATATGGACGGTGCTGAGCTCTATGGTCGTGTGCTTACTGTCAATTATGCCCTCCCTGAGCGTATCAAGGGTGGTGAACAAGGATGGGCCGCTCAGCCTATTTGGGCGGATGCGGATACGTGGTTTGAAAGGCAGCAACAAGAGGAGGAAATGCAGCGCATTCAAGCTGAGAATCGAGCGGCTATGGAGGCTGCGGAGGAGCTGCACAGGAAGAAGCTAGCCCAGGAACGGGAAGGGGAAAAAGACGAGGAGGTAGACACCAAGGATCCCATGGCTAAGGCTGAAGCTGAGGTTTTAAGACAGAACAGTTAAAGAGATGGAATTGATTGAGATTCGAACTTGCTTCTTCAATCCAAGTGAAAGAAGAGTGAAAGGCAGAGCATTGAAAACCTGCCATCTGAGCTTGCTCTTCACAATGACACATTCTTATTGGATTATTAGCAATTCATAGTTTGATAAGCTGAAAAATGTTTACCTTTCCTGAAAACTTGTAATTTTATTCAAAGAAGAGCTCAGGAGTAGGAGT

Coding sequence (CDS)

ATGGCGCAGGCTGTTCAGAAAAACACTCTGTACGTCGGTGGTTTGGCGGAGGAGGTGAACGAGTCTATTCTACACGCAGCCTTCATTCCCTTCGGCGAGATCAAAGACGTCAAGACTCCATTGGATCAAGCCACTCAAAAGCATCGTTCCTTCGGCTTCGTCACTTTCTTGGAAAAGGAAGACGCATCCGCCGCCATGGATAATATGGACGGTGCTGAGCTCTATGGTCGTGTGCTTACTGTCAATTATGCCCTCCCTGAGCGTATCAAGGGTGGTGAACAAGGATGGGCCGCTCAGCCTATTTGGGCGGATGCGGATACGTGGTTTGAAAGGCAGCAACAAGAGGAGGAAATGCAGCGCATTCAAGCTGAGAATCGAGCGGCTATGGAGGCTGCGGAGGAGCTGCACAGGAAGAAGCTAGCCCAGGAACGGGAAGGGGAAAAAGACGAGGAGGTAGACACCAAGGATCCCATGGCTAAGGCTGAAGCTGAGGTTTTAAGACAGAACAGTTAA

Protein sequence

MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTKDPMAKAEAEVLRQNS

Homology

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BLAST of CcUC08G154510 vs. NCBI nr
Match: XP_004144165.1 (peptidyl-prolyl cis-trans isomerase E [Cucumis sativus] >KGN47657.1 hypothetical protein Csa_018234 [Cucumis sativus])

HSP 1 Score: 323.2 bits (827), Expect = 1.4e-84
Identity = 168/171 (98.25%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKE 60
           MAQAVQKNTLYVGGLAEEVNESILHAAFIPFG+IKDVKTPLDQATQKHRSFGFVTFLEKE
Sbjct: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120
           DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR
Sbjct: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 121 IQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVLRQNS 171
           +QAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK DPMAKAEAEVLRQNS
Sbjct: 121 LQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTKVDPMAKAEAEVLRQNS 171

[Close]

BLAST of CcUC08G154510 vs. NCBI nr
Match: XP_008445441.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase E [Cucumis melo])

HSP 1 Score: 320.9 bits (821), Expect = 6.8e-84
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKE 60
           MAQAVQKNTLYVGGLAEEVNESILHAAFIPFG+IKDVKTPLDQATQKHRSFGFVTFLEKE
Sbjct: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120
           DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR
Sbjct: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 121 IQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVLRQNS 171
           +QAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK DPMAKAEAEVLRQ S
Sbjct: 121 LQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTKDDPMAKAEAEVLRQKS 171

[Close]

BLAST of CcUC08G154510 vs. NCBI nr
Match: KAA0064773.1 (peptidyl-prolyl cis-trans isomerase E [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 166/171 (97.08%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKE 60
           MAQAVQKNTLYVGGLAEEVNESILHAAFIPFG+IKDVKTPLDQATQKHRSFGFVTFLEKE
Sbjct: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120
           DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR
Sbjct: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 121 IQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVLRQNS 171
           +Q ENRAAMEAAEELHRKKLAQEREGEKDEEVDTK DPMAKAEAEVLRQ S
Sbjct: 121 LQTENRAAMEAAEELHRKKLAQEREGEKDEEVDTKDDPMAKAEAEVLRQKS 171

[Close]

BLAST of CcUC08G154510 vs. NCBI nr
Match: XP_038884408.1 (peptidyl-prolyl cis-trans isomerase E [Benincasa hispida])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 166/171 (97.08%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKE 60
           MAQAVQKNTLYVGGLAEEVNESILHAAFIPFG+IKDVKTPLDQATQKHRSFGFVTFLEKE
Sbjct: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120
           DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR
Sbjct: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 121 IQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVLRQNS 171
           IQAENRA MEAAEELHRKKLAQEREGEK+EEVDTK DPMAKAEAEVLRQ+S
Sbjct: 121 IQAENRATMEAAEELHRKKLAQEREGEKEEEVDTKDDPMAKAEAEVLRQSS 171

[Close]

BLAST of CcUC08G154510 vs. NCBI nr
Match: XP_022132314.1 (peptidyl-prolyl cis-trans isomerase E [Momordica charantia] >XP_022132315.1 peptidyl-prolyl cis-trans isomerase E [Momordica charantia])

HSP 1 Score: 316.2 bits (809), Expect = 1.7e-82
Identity = 163/169 (96.45%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 3   QAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDA 62
           QAVQKNTLYVGGLAEEVNESILHAAFIPFG+IKDVKTPLDQATQKHRSFGFVTFLEKEDA
Sbjct: 4   QAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63

Query: 63  SAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQ 122
           SAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQ
Sbjct: 64  SAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQ 123

Query: 123 AENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVLRQNS 171
           AENRAAM+AAEELHRKKLAQEREGEK++E+DTK DPMAKAEAEVLRQNS
Sbjct: 124 AENRAAMQAAEELHRKKLAQEREGEKEDEIDTKDDPMAKAEAEVLRQNS 172

[Close]

BLAST of CcUC08G154510 vs. ExPASy Swiss-Prot
Match: A4FV72 (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus OX=9913 GN=PPIE PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-27
Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 4   AVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDAS 63
           A  K  LYVGGLAEEV++ +LHAAFIPFG+I D++ PLD  T+KHR F FV F   EDA+
Sbjct: 2   ATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAA 61

Query: 64  AAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
           AA+DNM+ +EL+GR + VN A P RIK G    +++P+W+D D W ++
Sbjct: 62  AAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104

[Close]

BLAST of CcUC08G154510 vs. ExPASy Swiss-Prot
Match: Q9QZH3 (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus OX=10090 GN=Ppie PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 2.1e-27
Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = 0


Query: 4   AVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDAS 63
           A  K  LYVGGLAEEV++ +LHAAFIPFG+I D++ PLD  T+KHR F FV F   EDA+
Sbjct: 2   ATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAA 61

Query: 64  AAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFER 112
           AA+DNM+ +EL+GR + VN A P RIK G    +++P+W+D D W ++
Sbjct: 62  AAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKK 104

[Close]

BLAST of CcUC08G154510 vs. ExPASy Swiss-Prot
Match: Q5R723 (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii OX=9601 GN=PPIE PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-26
Identity = 66/139 (47.48%), Postives = 91/139 (65.47%), Query Frame = 0


Query: 4   AVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDAS 63
           A  K  LYVGGLAEEV++ +LHAAFIPFG+I D++ PLD  T+KHR F FV F   EDA+
Sbjct: 2   ATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAA 61

Query: 64  AAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTW--------FERQQQE 123
           AA+DNM+ +EL+GR + VN A P RIK G    +++P+W+D D W         E  ++E
Sbjct: 62  AAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKKFSGKTLEENKEE 121

Query: 124 EEMQRIQAENRAAMEAAEE 135
           E  +  +AE +    AA++
Sbjct: 122 EGSEPPKAETQEGEPAAKK 135

[Close]

BLAST of CcUC08G154510 vs. ExPASy Swiss-Prot
Match: Q9UNP9 (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens OX=9606 GN=PPIE PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 8.8e-26
Identity = 65/139 (46.76%), Postives = 90/139 (64.75%), Query Frame = 0


Query: 4   AVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDAS 63
           A  K  LYVGGLAEEV++ +LHAAFIPFG+I D++ PLD  T+KHR F FV F   EDA+
Sbjct: 2   ATTKRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAA 61

Query: 64  AAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTW--------FERQQQE 123
           AA+DNM+ +EL+GR + VN A P RIK G    +++P+W+D D W         E  ++E
Sbjct: 62  AAIDNMNESELFGRTIRVNLAKPMRIKEG----SSRPVWSD-DDWLKKFSGKTLEENKEE 121

Query: 124 EEMQRIQAENRAAMEAAEE 135
           E  +  +AE +     A++
Sbjct: 122 EGSEPPKAETQEGEPIAKK 135

[Close]

BLAST of CcUC08G154510 vs. ExPASy Swiss-Prot
Match: Q9V3G3 (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster OX=7227 GN=cyp33 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.3e-21
Identity = 61/152 (40.13%), Postives = 93/152 (61.18%), Query Frame = 0


Query: 7   KNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDASAAM 66
           K T+YVGGLA+EV E +L+ AFIPFG+I D++ P D  +Q+HR F F+ + + EDA+AA+
Sbjct: 5   KRTIYVGGLADEVTERLLNNAFIPFGDIADIQMPADYESQRHRGFAFIEYEQSEDAAAAI 64

Query: 67  DNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQ-------QQEEEMQ 126
           DNM+ +EL GR + VN A P R+K      + +PIWAD D W ++        + E E +
Sbjct: 65  DNMNDSELCGRTIRVNLAKPVRVKED----SFKPIWAD-DDWLQKHAGATLQPEGEPEAE 124

Query: 127 RIQAENR--AAMEAAEELHRKKLAQEREGEKD 150
           +++  +   A +E AE+ + +     R G  D
Sbjct: 125 KVETPSTGPAVIEKAEKRNPQVFFDIRIGGND 151

[Close]

BLAST of CcUC08G154510 vs. ExPASy TrEMBL
Match: A0A0A0KGY3 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366550 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 6.7e-85
Identity = 168/171 (98.25%), Postives = 170/171 (99.42%), Query Frame = 0


Query: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKE 60
           MAQAVQKNTLYVGGLAEEVNESILHAAFIPFG+IKDVKTPLDQATQKHRSFGFVTFLEKE
Sbjct: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120
           DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR
Sbjct: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 121 IQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVLRQNS 171
           +QAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK DPMAKAEAEVLRQNS
Sbjct: 121 LQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTKVDPMAKAEAEVLRQNS 171

[Close]

BLAST of CcUC08G154510 vs. ExPASy TrEMBL
Match: A0A1S3BCQ8 (peptidyl-prolyl cis-trans isomerase E OS=Cucumis melo OX=3656 GN=LOC103488462 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 3.3e-84
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKE 60
           MAQAVQKNTLYVGGLAEEVNESILHAAFIPFG+IKDVKTPLDQATQKHRSFGFVTFLEKE
Sbjct: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120
           DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR
Sbjct: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 121 IQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVLRQNS 171
           +QAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK DPMAKAEAEVLRQ S
Sbjct: 121 LQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTKDDPMAKAEAEVLRQKS 171

[Close]

BLAST of CcUC08G154510 vs. ExPASy TrEMBL
Match: A0A5A7V9E9 (Peptidyl-prolyl cis-trans isomerase E OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00780 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 9.6e-84
Identity = 166/171 (97.08%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKE 60
           MAQAVQKNTLYVGGLAEEVNESILHAAFIPFG+IKDVKTPLDQATQKHRSFGFVTFLEKE
Sbjct: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120
           DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR
Sbjct: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 121 IQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVLRQNS 171
           +Q ENRAAMEAAEELHRKKLAQEREGEKDEEVDTK DPMAKAEAEVLRQ S
Sbjct: 121 LQTENRAAMEAAEELHRKKLAQEREGEKDEEVDTKDDPMAKAEAEVLRQKS 171

[Close]

BLAST of CcUC08G154510 vs. ExPASy TrEMBL
Match: A0A6J1BSQ7 (peptidyl-prolyl cis-trans isomerase E OS=Momordica charantia OX=3673 GN=LOC111005196 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.1e-83
Identity = 163/169 (96.45%), Postives = 168/169 (99.41%), Query Frame = 0


Query: 3   QAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDA 62
           QAVQKNTLYVGGLAEEVNESILHAAFIPFG+IKDVKTPLDQATQKHRSFGFVTFLEKEDA
Sbjct: 4   QAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKEDA 63

Query: 63  SAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQ 122
           SAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQ
Sbjct: 64  SAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQ 123

Query: 123 AENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVLRQNS 171
           AENRAAM+AAEELHRKKLAQEREGEK++E+DTK DPMAKAEAEVLRQNS
Sbjct: 124 AENRAAMQAAEELHRKKLAQEREGEKEDEIDTKDDPMAKAEAEVLRQNS 172

[Close]

BLAST of CcUC08G154510 vs. ExPASy TrEMBL
Match: A0A6J1K4K2 (peptidyl-prolyl cis-trans isomerase E OS=Cucurbita maxima OX=3661 GN=LOC111492233 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 163/171 (95.32%), Postives = 168/171 (98.25%), Query Frame = 0


Query: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKE 60
           MAQAVQKNTLYVGGLAEEVNESILHAAFIPFG+IKDVKTPLDQATQKHRSFGFVTFLEKE
Sbjct: 1   MAQAVQKNTLYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKE 60

Query: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120
           DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR
Sbjct: 61  DASAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQR 120

Query: 121 IQAENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVLRQNS 171
           IQAENRA M+AAEELHRKK+AQEREGEK++EVDTK DPMAKAEAE LRQNS
Sbjct: 121 IQAENRATMQAAEELHRKKVAQEREGEKEDEVDTKDDPMAKAEAEALRQNS 171

[Close]

BLAST of CcUC08G154510 vs. TAIR 10
Match: AT1G13690.1 (ATPase E1 )

HSP 1 Score: 279.3 bits (713), Expect = 2.1e-75
Identity = 139/165 (84.24%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 3   QAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDA 62
           QA+QKNTLYVGGLA+EVNESILHAAFIPFG+IKDVKTPLDQA QKHRSFGFVTFLE+EDA
Sbjct: 8   QAMQKNTLYVGGLADEVNESILHAAFIPFGDIKDVKTPLDQANQKHRSFGFVTFLEREDA 67

Query: 63  SAAMDNMDGAELYGRVLTVNYALPERIKGGEQGWAAQPIWADADTWFERQQQEEEMQRIQ 122
           SAAMDNMDGAELYGRVLTVNYALPE+IKGGEQGWAA P+WADADTWFERQQQE+E+ ++Q
Sbjct: 68  SAAMDNMDGAELYGRVLTVNYALPEKIKGGEQGWAAHPLWADADTWFERQQQEKEILKMQ 127

Query: 123 AENRAAMEAAEELHRKKLAQEREGEKDEEVDTK-DPMAKAEAEVL 167
           AEN+AAME AEELHRKKLA++R+GE +E+ DTK DPMA+AEA+ L
Sbjct: 128 AENKAAMETAEELHRKKLAEDRQGEMEEDTDTKNDPMARAEADAL 172

[Close]

BLAST of CcUC08G154510 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-15
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 0


Query: 3   QAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDA 62
           + +  + L++GG+A  ++E  L  AF  +GE+ D +  LD+ T + R FGFVTF   E A
Sbjct: 35  RCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAA 94

Query: 63  SAAMDNMDGAELYGRVLTVNYALPERIKGGEQG 96
           S+A+  +DG +L+GRV+ VNYA  +R  GG  G
Sbjct: 95  SSAIQALDGRDLHGRVVKVNYA-NDRTSGGGFG 126

[Close]

BLAST of CcUC08G154510 vs. TAIR 10
Match: AT3G08000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 77.8 bits (190), Expect = 9.4e-15
Identity = 39/91 (42.86%), Postives = 58/91 (63.74%), Query Frame = 0


Query: 2   AQAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKED 61
           + A   + L++GGL+  V+E  L  AF  FGE+ +V+   D+ + + R FGFV F E+ D
Sbjct: 35  SSASPSSKLFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGD 94

Query: 62  ASAAMDNMDGAELYGRVLTVNYALPERIKGG 93
           A +A D MDG  L GR L +++AL ER++GG
Sbjct: 95  ALSAKDAMDGKGLLGRPLRISFAL-ERVRGG 124

[Close]

BLAST of CcUC08G154510 vs. TAIR 10
Match: AT1G74230.1 (glycine-rich RNA-binding protein 5 )

HSP 1 Score: 68.2 bits (165), Expect = 7.4e-12
Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 0


Query: 3   QAVQKNTLYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDA 62
           + +  + ++VGG++   +E  L  AF  +GE+ D K  +D+ T + R F FVTF   E+A
Sbjct: 29  RCMSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEA 88

Query: 63  SAAMDNMDGAELYGRVLTVNYALPERIKGGEQGW 97
           S AM  +DG +L+GR + VNYA       G +G+
Sbjct: 89  SNAM-QLDGQDLHGRRIRVNYATERGSGFGGRGF 121

[Close]

BLAST of CcUC08G154510 vs. TAIR 10
Match: AT4G13850.4 (glycine-rich RNA-binding protein 2 )

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-11
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 0


Query: 10  LYVGGLAEEVNESILHAAFIPFGEIKDVKTPLDQATQKHRSFGFVTFLEKEDASAAMDNM 69
           L++GGL+   +++ L  AF  FG++ D K  +D+ T + R FGFV F ++  A+AA+  M
Sbjct: 37  LFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEM 96

Query: 70  DGAELYGRVLTVNYALPERIKGGEQG 96
           DG EL GR + VN A  +R  GG  G
Sbjct: 97  DGKELNGRHIRVNPA-NDRPSGGYGG 121

The following BLAST results are available for this feature:

BLAST of CcUC08G154510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144165.1	1.4e-84	98.25	peptidyl-prolyl cis-trans isomerase E [Cucumis sativus] >KGN47657.1 hypothetical...	[more]
XP_008445441.1	6.8e-84	97.66	PREDICTED: peptidyl-prolyl cis-trans isomerase E [Cucumis melo]	[more]
KAA0064773.1	2.0e-83	97.08	peptidyl-prolyl cis-trans isomerase E [Cucumis melo var. makuwa]	[more]
XP_038884408.1	2.6e-83	97.08	peptidyl-prolyl cis-trans isomerase E [Benincasa hispida]	[more]
XP_022132314.1	1.7e-82	96.45	peptidyl-prolyl cis-trans isomerase E [Momordica charantia] >XP_022132315.1 pept...	[more]

BLAST of CcUC08G154510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A4FV72	2.1e-27	54.63	Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus OX=9913 GN=PPIE PE=2 SV=1	[more]
Q9QZH3	2.1e-27	54.63	Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus OX=10090 GN=Ppie PE=1 SV=2	[more]
Q5R723	2.3e-26	47.48	Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii OX=9601 GN=PPIE PE=2 SV=1	[more]
Q9UNP9	8.8e-26	46.76	Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens OX=9606 GN=PPIE PE=1 SV=1	[more]
Q9V3G3	1.3e-21	40.13	Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster OX=7227 GN=cyp3...	[more]

BLAST of CcUC08G154510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGY3	6.7e-85	98.25	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366550 PE=4 SV...	[more]
A0A1S3BCQ8	3.3e-84	97.66	peptidyl-prolyl cis-trans isomerase E OS=Cucumis melo OX=3656 GN=LOC103488462 PE...	[more]
A0A5A7V9E9	9.6e-84	97.08	Peptidyl-prolyl cis-trans isomerase E OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1BSQ7	8.1e-83	96.45	peptidyl-prolyl cis-trans isomerase E OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1K4K2	1.1e-82	95.32	peptidyl-prolyl cis-trans isomerase E OS=Cucurbita maxima OX=3661 GN=LOC11149223...	[more]

BLAST of CcUC08G154510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13690.1	2.1e-75	84.24	ATPase E1	[more]
AT5G61030.1	1.1e-15	41.94	glycine-rich RNA-binding protein 3	[more]
AT3G08000.1	9.4e-15	42.86	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G74230.1	7.4e-12	37.23	glycine-rich RNA-binding protein 5	[more]
AT4G13850.4	1.3e-11	41.86	glycine-rich RNA-binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 111..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..170
None	No IPR available	PANTHER	PTHR15241:SF297	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE E	coord: 3..169
None	No IPR available	PANTHER	PTHR15241	TRANSFORMER-2-RELATED	coord: 3..169
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 9..82 e-value: 2.0E-23 score: 93.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 10..79 e-value: 1.5E-18 score: 66.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 8..86 score: 18.273893
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..153 e-value: 2.7E-26 score: 94.3
IPR034168	Peptidyl-prolyl cis-trans isomerase E, RNA recognition motif	CDD	cd12347	RRM_PPIE	coord: 10..82 e-value: 3.93629E-44 score: 138.509
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 6..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G154510.1	CcUC08G154510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016853	isomerase activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding