CcUC08G154410 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACCTCCCATTCAAGTAAGCTTCTGGGAATCTTCTCTTCCTCTTCATTTCTTCATTTTGTTCACTGGCTTCCATTTCAAGCCTTTCTGTAACTTAAAATGGGATTTTACAGCTTCTGGAATCTTCTCTTCCTCTTCGTTTCTTCATTTTGTTCACTGGCTTCCATTTGAAGCTTTTCTGCAGTTTAAAATGGGATTTTACACAAGAATCGTTTGAACCCTCTGAAGGGTATTCAAAAAATCAATAGAAATTAGAAAAGAAACAGTTGGCTCCATTTTTTTTAAGCTTCTGATAAACCCTTTTCTGGAATCTTCTTTAGGTGCAACTTATTGTATTTGTAAAGAAGGACTGAGTGACCAAGCCCTTCAGAAAAGTTTGGATTATGCCTGTGGAGCTGGAGCTGATTGTACTGCAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACTGTGAAAGATCATTGTAGTTATGCTGTTAACAGCTATTTTCAGAGGAAGGGTCAAGTTCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGCCTAGCCAATCTCCTCCTGGTATAAGACCTTTTTTTTTTTTTTTCATTTTTACTCATCTTCTTCATCAACTGGTTTGTTTTTTGTTGCTTAACATTTTTGGGTCTTGTCTTGTGTTTTTCTTTTACAGCTGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGGTACCCATTTCAATTTCTTCACTCCCTTGCAGTTTTTGAAGAATTGATCTCACATCCAACTGTTTAGATAGTGTGTTTCTGTTCAATGTTCTAAATGGAAAGTGGGTTTGAGTTGAATACTTTGTTTAAAAAGAAACAAAGACTACCGAAGAATCAAAATTTTGGAGGAGTTGAAATTTGAAAAGGTTTAAGGAAAAGTAAAGCACTAGTCTCTTAAACAATACTCAAATATCTCCATTTTTTTTACTGGGAATTTGGTTCTGAAAGTGGCATATTCCAAATTTCAAGAGACTCTTTTTTAACCCAAAGTTATCTTTTTCCCAACTTTTTGAGTTGGTGTTGGCGAGAATCTGCTGCCTAATGGAAAAAAAGAAACGAAACTAAAAAACTTCTATCAAGAATCCAATTCCCTTCCCCCTCTTTCTCAATGATCAAGCTTGGCTTTATTGAGTATCTTTTCCCCTTGGAAAGTTACAATTGTTGATAATGTAATCTATATGGAAAATGTTTTGAAAATATATTACTTTGGATGAAAATTATCTTATGGGTAGAATCTGTTAACAAGTTAACCTTCACTTTTACAGTCTCTCTCACAGCTTCCAAACAGTAGAGTACATCCATTACTCTCATTAATAATGTATAAAACCACTTCTTCTAACACTTGCTACTTGCTAGACTACTAAAAGAATACAAGCTGTCTGATGTTAATATGGGTTTTCTAAGTTGTCTCAATCCTCTTCTTCTCCAAGATACAATTCCATTGTTAGACACCTGTCTTCTAGATGTGCTTTAACTTTAGATGATCCATATCTGCTTCTCTTTTTGTATGTCCAATGAAAAACTTACCATTCAAATTTGCATTGATGACAATGACATTAACAAATCAAAACTAATATCATATTAAATTTACCTCTATTCATCAGTTTAAATTTTTGGGTCAATAGTATCAAAGCAGGATGTCCTAGTTCAAACCATGCAATGCTATTTCCTCCCCATTTAATATTGACTTCCACATGTTGAGTCTTCTACAAATTTTCAAACCTACAAGTGAGAGGGTTAAAGTTTTGATATAATATTAAATTTACCTTCACACATCAACTTAAGCTTTTGAGTCAATGGGTGATTTAACAAACACTCATATCCCTTTTCGTTTTCCCGTGGTATGTTTCAGTTTCACAGGTACCCCAACCAGCACCACCCCATCAACAACCCCATCAACCACCATTCCCGGCACAACACCGGGAACCACCACAAACCCATCGACAACACCACCCTCAACAACAACTCCCGGCACAACCTCCCCTTCAGTGTTTGGGAGTGGGATAAGCCCAACAGGTGGTGTCGGTCTCGGTGGTAGCGGGAATAGTATGGATGGCAGCGCTGCTGCAGGTCTTAATGCAGCAGCCTCTAACTTGTTCTTCTTCACAGCCACTGTGACATTTTGGTTATCAATGTTCTTCTAG ATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACCTCCCATTCAAGTGCAACTTATTGTATTTGTAAAGAAGGACTGAGTGACCAAGCCCTTCAGAAAAGTTTGGATTATGCCTGTGGAGCTGGAGCTGATTGTACTGCAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACTGTGAAAGATCATTGTAGTTATGCTGTTAACAGCTATTTTCAGAGGAAGGGTCAAGTTCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGCCTAGCCAATCTCCTCCTGCTGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGTTTCACAGGTACCCCAACCAGCACCACCCCATCAACAACCCCATCAACCACCATTCCCGGCACAACACCGGGAACCACCACAAACCCATCGACAACACCACCCTCAACAACAACTCCCGGCACAACCTCCCCTTCAGTGTTTGGGAGTGGGATAAGCCCAACAGGTGGTGTCGGTCTCGGTGGTAGCGGGAATAGTATGGATGGCAGCGCTGCTGCAGGTCTTAATGCAGCAGCCTCTAACTTGTTCTTCTTCACAGCCACTGTGACATTTTGGTTATCAATGTTCTTCTAG ATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACCTCCCATTCAAGTGCAACTTATTGTATTTGTAAAGAAGGACTGAGTGACCAAGCCCTTCAGAAAAGTTTGGATTATGCCTGTGGAGCTGGAGCTGATTGTACTGCAATCCTTCAAAATGGCCCTTGTTTTCAACCCAATACTGTGAAAGATCATTGTAGTTATGCTGTTAACAGCTATTTTCAGAGGAAGGGTCAAGTTCAAGGGAGCTGTGATTTTTCAGGCACTGCCATGCCTAGCCAATCTCCTCCTGCTGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGTTTCACAGGTACCCCAACCAGCACCACCCCATCAACAACCCCATCAACCACCATTCCCGGCACAACACCGGGAACCACCACAAACCCATCGACAACACCACCCTCAACAACAACTCCCGGCACAACCTCCCCTTCAGTGTTTGGGAGTGGGATAAGCCCAACAGGTGGTGTCGGTCTCGGTGGTAGCGGGAATAGTATGGATGGCAGCGCTGCTGCAGGTCTTAATGCAGCAGCCTCTAACTTGTTCTTCTTCACAGCCACTGTGACATTTTGGTTATCAATGTTCTTCTAG MAVLLLCYLIFLAFTSHSSATYCICKEGLSDQALQKSLDYACGAGADCTAILQNGPCFQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSFTGTPTSTTPSTTPSTTIPGTTPGTTTNPSTTPPSTTTPGTTSPSVFGSGISPTGGVGLGGSGNSMDGSAAAGLNAAASNLFFFTATVTFWLSMFF Homology
BLAST of CcUC08G154410 vs. NCBI nr
Match: XP_004144176.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis sativus] >KAE8647252.1 hypothetical protein Csa_018278 [Cucumis sativus] >KGN47648.1 hypothetical protein Csa_018913 [Cucumis sativus]) HSP 1 Score: 367.5 bits (942), Expect = 7.7e-98 Identity = 199/206 (96.60%), Postives = 202/206 (98.06%), Query Frame = 0
BLAST of CcUC08G154410 vs. NCBI nr
Match: XP_008445454.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA0064762.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 365.2 bits (936), Expect = 3.8e-97 Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of CcUC08G154410 vs. NCBI nr
Match: XP_038886488.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida]) HSP 1 Score: 357.1 bits (915), Expect = 1.0e-94 Identity = 196/206 (95.15%), Postives = 198/206 (96.12%), Query Frame = 0
BLAST of CcUC08G154410 vs. NCBI nr
Match: XP_022131475.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia]) HSP 1 Score: 328.6 bits (841), Expect = 4.0e-86 Identity = 178/207 (85.99%), Postives = 189/207 (91.30%), Query Frame = 0
BLAST of CcUC08G154410 vs. NCBI nr
Match: XP_023546942.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.1 bits (793), Expect = 1.5e-80 Identity = 175/206 (84.95%), Postives = 181/206 (87.86%), Query Frame = 0
BLAST of CcUC08G154410 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33 Identity = 94/164 (57.32%), Postives = 111/164 (67.68%), Query Frame = 0
BLAST of CcUC08G154410 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 8.8e-28 Identity = 87/186 (46.77%), Postives = 114/186 (61.29%), Query Frame = 0
BLAST of CcUC08G154410 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 9.7e-27 Identity = 97/222 (43.69%), Postives = 128/222 (57.66%), Query Frame = 0
BLAST of CcUC08G154410 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24 Identity = 74/166 (44.58%), Postives = 100/166 (60.24%), Query Frame = 0
BLAST of CcUC08G154410 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21 Identity = 83/179 (46.37%), Postives = 108/179 (60.34%), Query Frame = 0
BLAST of CcUC08G154410 vs. ExPASy TrEMBL
Match: A0A0A0KDN8 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 3.8e-98 Identity = 199/206 (96.60%), Postives = 202/206 (98.06%), Query Frame = 0
BLAST of CcUC08G154410 vs. ExPASy TrEMBL
Match: A0A5A7V8S9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00670 PE=4 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 1.9e-97 Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of CcUC08G154410 vs. ExPASy TrEMBL
Match: A0A1S3BDH0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC103488471 PE=4 SV=1) HSP 1 Score: 365.2 bits (936), Expect = 1.9e-97 Identity = 197/206 (95.63%), Postives = 201/206 (97.57%), Query Frame = 0
BLAST of CcUC08G154410 vs. ExPASy TrEMBL
Match: A0A6J1BPT8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=LOC111004672 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 1.9e-86 Identity = 178/207 (85.99%), Postives = 189/207 (91.30%), Query Frame = 0
BLAST of CcUC08G154410 vs. ExPASy TrEMBL
Match: A0A6J1HDW5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111462671 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 7.9e-80 Identity = 173/206 (83.98%), Postives = 180/206 (87.38%), Query Frame = 0
BLAST of CcUC08G154410 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 ) HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34 Identity = 94/164 (57.32%), Postives = 111/164 (67.68%), Query Frame = 0
BLAST of CcUC08G154410 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 138.3 bits (347), Expect = 7.1e-33 Identity = 97/202 (48.02%), Postives = 121/202 (59.90%), Query Frame = 0
BLAST of CcUC08G154410 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein ) HSP 1 Score: 132.5 bits (332), Expect = 3.9e-31 Identity = 80/154 (51.95%), Postives = 101/154 (65.58%), Query Frame = 0
BLAST of CcUC08G154410 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 ) HSP 1 Score: 125.2 bits (313), Expect = 6.2e-29 Identity = 87/186 (46.77%), Postives = 114/186 (61.29%), Query Frame = 0
BLAST of CcUC08G154410 vs. TAIR 10
Match: AT1G69295.1 (plasmodesmata callose-binding protein 4 ) HSP 1 Score: 121.7 bits (304), Expect = 6.9e-28 Identity = 97/222 (43.69%), Postives = 128/222 (57.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|