CcUC08G154120 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G154120
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Description60S ribosomal protein L17
LocationCicolChr08: 22500053 .. 22505720 (+)
RNA-Seq ExpressionCcUC08G154120
SyntenyCcUC08G154120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTCCCCTCTCTTCTTATAAGCCTAATTCAAGCATTTCCCTTCCTCCGTTCACGGCCAAATCCAACTTTTCTTCACAAACTCGAAGTTGCAGCCGTCGCCATGGTTCGTCTTCCCTCTTCTTGATTTCCCCTTCCAAACACTGTCATCTCAGTTTCAAGTTAGCGACTAATCTTCTATTCCTGTTCTTATTCATTGTTGCAGGTGAAGTATTCCAGGGAACCAGACAATCCTACCAAGTGTATTTTTCTTTTTCCACTCTTTCTCTTATGGATCTTTCTTGATTTCTATTCAACGCTTTGCATTTGATTTGTTTATCGCCTTCCTGTTTGAATTTTCTGACTTGAGTGATCTTTTCCCCTTGAGCTGACACGCAGTTGTTATTCTTTTCAGCCTGCAAAGCCCGTGGCTCGGACCTCAGAGTCCACTTTAAGGTAGGTTTTATCCTGCTTCGTTACTCTGCAGTCCTTCGGAATGACAATCAACTAGAAGTACTGTGAATTAGGGTTTATTCCTGTAGCATTTGAATGTTGCATTTTTGTTTTAGGATTCAAATTCTCTCTTCTGGAGTGATATTTGTGCTTGGTTGACATTCGGAGACGGATGCTCCGCATATACTGTTTGCTTTAACGTGCTCCTTTGTCCCATTGAATGTTGTATAAATATGCTCGATCCAATACCATATTCCCTTTTCTGTGCAAGTAAACGTATGGTTTAAGTGAGAATATATTAGGTTGTTTGTTGATGATGCCATCTTAAAAGGCTTGTTTCTCGAAACAATTGCAGTTGCCCTTTAAGAGCTAATTTTCCGGACTTACAAACATAATATGACGATTTATACTGATTAGATTAATAGATCATATAAATATCCGTGAACAATAACTTTCACTGTATTTCTGCGTCACCTGATGATAAAAGCAGGGCTCTGTTGCCTTCTGTGAACAGGGCTCTCGTAAACTTCAGGGAAATTATATGCATTGTTATTGGGTGAACCTCTAACAAATAATGTTCGAAGGTTCAGTAAATGATGCTACATATTTAAGCTTGTATTTTGACTTGCATATTTTAGTACCACATGTTGCTTAGACTCACCCAACTCGTCTGTTTTTTGTATTATAGAACACAAGGGAAACTGCACATGCTATCAGAAAGTTGCCGCTGGCCAAGGCCAAGAGGTACCTAGAGGATGTGCTTGCCCACAAACAGGCCATTCCTTTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGAACAGGCATTCCAATGGTCAAGGACGTTGGCCTGTCAAATCTGCAAAGTTTATTCTAGATTTGCTTAAGAATGCTGAAAGCAATGCTGAAGTATGTGTTTCTTTTTCTGTCTCGCCTCACCTGAACTATTCCTTATCTTTTTCTCCTCCTGCTTATGATTAACTCTGCTCTTTCAGGTTAAGGGTCTGGATGTTGATTTGCTCCACGTATCTCACATCCAAGTAAACCAAGCTCAGAAACAAAGGCGTCGTACCTACCGTGCTCATGGAAGAATCAACCGTATGTTCTGGCTACGGTTTACTTATATTTATATGGATGTCCATGCTTGAACATATTGCCTGACCTTCAATTCCTTGTTCTTTTTTTCTTTCTGATTGGCAGCTTACATGTCTTCTCCTTGCCACATTGAGCTGATCTTGTCTGAAAAGGAAGAGCCTGTTAAGAAGGAGGTAATAAATCAGACTGCTTAATTACCTTGTGCTGTAAAGGGTAGTTTCCTTTTAGAnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTGGAATATAACACAAGTTTATAGTTTATACTAAATCAATGACTTCTTTGAAATTTTAATGCATTAGCTACAATTCAGTCAATACTACAAGTACCTGGTCTGTGGATCTCACTTTCTGCAGGGTAATTTATAGCTTTAATGGACTGATTTTGTTGAGAATTTTGTGAATATTGGTGCCGGAGAGTTCCACATTCTTGTCCTAATTCAAGGATTTTGGATCTTAGTTCTCAAGTCATTTTGTTGGCTACCTAACATTGAATTTTAGTAGTTTTATTTTATGGAGTTGTTTGTAATTGTAATGCATTGCTTCTTGTTTGGGGAAACTCGTTAAATATCCTTGTTGAAACAGGGAATTTTCAGGAAGGAATTGAGGAGCCCAGGTTGGGAAGAAAAGTATAAAGCAAGCATGAACAAAAGGATTAAAGTGCAAGAATTATACAAGGAGATGGGAATCCACATAAAGGTTGATTATGTTTTCAGAAAGGTATAAGGATATGTAGTGTGAGAAACAAGTTTTCCTTGTGATTATTGTTTGTATTTTCTTGAAGCACCCAATTCAAGCTTCTAGCTTTTAGATAAACTCCATTGCCATCGTAAAGAAAATTGGAATAAATCTTTTCTTTTTAATAGATAAATTTGATTTTTCACATTTTAACCTTTAATTATGTCGTTGCCCTATGTATAAAGTTATTTTTAAATATAGCAAAACGAATTCAACTATTTACAAAGATAGAAATTTTTTACTGTCTATCTGCGATAGACGTCTAAAAGGGATAGAAGTCTATCAATAGTTGATAGAAAATGAAACTTTTTTATATTTGTAAATGGTTTGATATTTTTTCTCTTTATAATAATTTTTCTAAAAAATATATATACACTTTTTATACAGTTTAGTCTTCACCTTTTTCCTTTGTAATTTTATCAAATTCGGTTTAACTTTGAAAAAATGGTGAAATTAATACTTCATTGAGTGTTTATTACTGTATTTTGGAAAGATCTATGACAAATTAGAAGGATTATTATGATTTTTTTTTTTTTTTnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnCAACACCTAATTTTTTTTTAAAACACCTTAAAAAAAAAAGTGATAATAAATAAAATAAAATAAATCAGTACAATCCATACCCGACAAAACTGATAAAATTAGATAGAATAATTATGTAACATCTTAAAATATACGTTGTTTTATATGTTCTTATGATGGATTTTTTAATGGTAAATATCTCTTTCATGTTTTCATATGAACTAATTTTGTATGGTAAGGGATTTTGATGCAGCTTAATGGATAAATTAATAATTACCGTATTAAACGTTAATGGTTTAATTTTTATTTCATAATTGTTAACCAAAAAAGTCAACTTAAAAAAAAAAAATTAACCACTCTATGATTAGTGATTAATGATGATCCGTTTTAGCACGTTGTGATTTTATAAAAATAATAATAATATTATTATTACTTTGTTAAATTACAACTTCAGTTTTATGTTTGGTAGATATTTAAATTTTAAAAGGGGTTTAGATTTTTAAACTTTCCATGTTATGTTTAACTTATCGGACATTTTTTAAAAGTATGGACTGAATTATCGACAAAATTGAAAGTTTAAAGTTTTATTAAACATAAATTTCAATTTTATATCTAATAAATTAATTATTTTTTAAAATTATAGAATATGTCATCAACTTATTACACACAAATTGAAAGTTTAGAAACTTATTAGACATTTTAGAAGTTTATTGACCTATTAGATACTTACAATTAAAAATTAAATGATTAAGGTTAAAATGCTATTTTGGTCTCTATACTTTGTAATTTATTCAATTTTAGTCCCTATACTTTTAATAAATATCAAATTTAGTCTTTCGTTAAATAATCACAATAATTTTAATACAAAGAAACACAAATTAACACAAAGCACTAGATCTTTTGTCTAAACTTGATAATCCTTCCCCTTTTTTTTAAAATTAAATTTGTATTTATTTTTTCACACTCAAACTCTTAGAATGATTTGTATTATTTCAAAATAAACGTATAAAAATATTTTTAGTCAGATTCTAAAAACAAAAATTAATTTTTTAAGGGTTGTTTTTAAATATAGAAAAACGATCTAATTTATTTATAATATAGCAAAATGTCATTGTTTATTAGGAATATATAACAATAGATAATATAACTAATGACGTATACAATACTTGAATTCTCGATGTAGATGCTACATAGTTGnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnTATTTCTTATTTCTCATTCATTCATGATGTTACAGCCGGAGACTCATCTGGCGACTGGCAAACCTAAGAAAGGTCAAGCAATCCGTAGTGGCGCTTCCTCTTGAATGGCAAAAGTATAAATTCTGTTTGTGGGTTTTTGCTGTGCCATTTGTTTTTTTGAAGTGAGTTTAATTATTGATCGCTATATAGAACGAGGGATTACTATTTAGGTGTTTTCTGTGACATGTTATATTTGGAACCTTTTCTAGTTCAATTTTCGTCAAGTTGCAATCACATTCTGGTATTTTGCTTTTATTTCTTGATGAGATCTCTTGACCCCTTGGCATAGTCAATGATCATTATTTTCATTCTTCTTCTAAATTAACAATGAAAGACGTCCACACACCCCGTTGATTATCTTCTGTGTTCACTTACGAAGATACATTTACGTGCCTTTGCACCTGAGATTCTGCACCACCATATTGATTCTTTAACAAAGTTGATATTTCAAAATTGCAACTTTCATTCCAAGTTTTATTGTTCTGTTTTGTCCTATCGACCCACACATAAAGTCATCGGCTACAAAGAATTCAATTAGTTCGGCTTAAAGTGATGTTCAATCTCTTTCTCCTTTTTTCGGTGGTAGGTTTTGGGGATGGGTGGTCGAAAAATGATTTTGATAATTAAAATTCTTTTCGAAGAATGGTTTATTTTCGAAGAGGGAATGTATTAGAAAAAATCCTTTTGTACATGATCTTGGAGGACTTTAGTTTATGACATAAATTTCATTAAAGATAGATTAAAACTTCAAAGTATCTTCACTTTTCAAAACATAGGTAAATTCATCTTGACTATCTTTAATTCATGCCTCAACTGGTTCGGTAATTAGAGATTTGCACTTGACCTGTGGGGATTTCCCGGGGAATGTTGTTTATTTCTATTATATAATCATTATATTTAAGTTTCAAAATTTATTGTTTAAAGGATCAAAATAATGAGTATGTTTGAATTAGTGTGAAAAAAAAAAGATATGTTTGAATTTTAATAAATTTAGATTATGAATATATAAATAATTTGATAGATAATTATTTCTTTCAAATTTAATCTCTTTAAATTCTAATTGTTCATATAAAATTAACTATATAAAAGAAATTATTTTTTTTAGAAAGAAGTTGGACGAGAATGAAATGGAGAACCTGGCCCGATGGACATCTCTAGTCAAAATCAACTTCAACTGGCAGTACAAAAATTAAATGCAAATGTGATTCTTTTCTTTTTCAGGTGGATGGATTTAAGGATTTAATAATTTATTTCTTAGTGAGTATATAATTAATGGAAGTTCGCAAACACTTATCAACTTCAAAAGTTCAGAAATTTACCTAGAAAATTAGACACATCCTTGTACGCCT

mRNA sequence

TTTGTCCCCTCTCTTCTTATAAGCCTAATTCAAGCATTTCCCTTCCTCCGTTCACGGCCAAATCCAACTTTTCTTCACAAACTCGAAGTTGCAGCCGTCGCCATGGTGAAGTATTCCAGGGAACCAGACAATCCTACCAAGTCCTGCAAAGCCCGTGGCTCGGACCTCAGAGTCCACTTTAAGAACACAAGGGAAACTGCACATGCTATCAGAAAGTTGCCGCTGGCCAAGGCCAAGAGGTACCTAGAGGATGTGCTTGCCCACAAACAGGCCATTCCTTTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGAACAGGCATTCCAATGGTCAAGGACGTTGGCCTGTCAAATCTGCAAAGTTTATTCTAGATTTGCTTAAGAATGCTGAAAGCAATGCTGAAGTTAAGGGTCTGGATGTTGATTTGCTCCACGTATCTCACATCCAAGTAAACCAAGCTCAGAAACAAAGGCGTCGTACCTACCGTGCTCATGGAAGAATCAACCCTTACATGTCTTCTCCTTGCCACATTGAGCTGATCTTGTCTGAAAAGGAAGAGCCTGTTAAGAAGGAGCCGGAGACTCATCTGGCGACTGGCAAACCTAAGAAAGGTCAAGCAATCCGTAGTGGCGCTTCCTCTTGAATGGCAAAAAAAGAAGTTGGACGAGAATGAAATGGAGAACCTGGCCCGATGGACATCTCTAGTCAAAATCAACTTCAACTGGCAGTACAAAAATTAAATGCAAATGTGATTCTTTTCTTTTTCAGGTGGATGGATTTAAGGATTTAATAATTTATTTCTTAGTGAGTATATAATTAATGGAAGTTCGCAAACACTTATCAACTTCAAAAGTTCAGAAATTTACCTAGAAAATTAGACACATCCTTGTACGCCT

Coding sequence (CDS)

TTTGTCCCCTCTCTTCTTATAAGCCTAATTCAAGCATTTCCCTTCCTCCGTTCACGGCCAAATCCAACTTTTCTTCACAAACTCGAAGTTGCAGCCGTCGCCATGGTGAAGTATTCCAGGGAACCAGACAATCCTACCAAGTCCTGCAAAGCCCGTGGCTCGGACCTCAGAGTCCACTTTAAGAACACAAGGGAAACTGCACATGCTATCAGAAAGTTGCCGCTGGCCAAGGCCAAGAGGTACCTAGAGGATGTGCTTGCCCACAAACAGGCCATTCCTTTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGAACAGGCATTCCAATGGTCAAGGACGTTGGCCTGTCAAATCTGCAAAGTTTATTCTAGATTTGCTTAAGAATGCTGAAAGCAATGCTGAAGTTAAGGGTCTGGATGTTGATTTGCTCCACGTATCTCACATCCAAGTAAACCAAGCTCAGAAACAAAGGCGTCGTACCTACCGTGCTCATGGAAGAATCAACCCTTACATGTCTTCTCCTTGCCACATTGAGCTGATCTTGTCTGAAAAGGAAGAGCCTGTTAAGAAGGAGCCGGAGACTCATCTGGCGACTGGCAAACCTAAGAAAGGTCAAGCAATCCGTAGTGGCGCTTCCTCTTGA

Protein sequence

FVPSLLISLIQAFPFLRSRPNPTFLHKLEVAAVAMVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSGASS
Homology
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BLAST of CcUC08G154120 vs. NCBI nr
Match: XP_038885177.1 (60S ribosomal protein L17-2-like [Benincasa hispida])

HSP 1 Score: 364.8 bits (935), Expect = 5.3e-97
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSG 214
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPET LATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 215 ASS 218
           ASS
Sbjct: 181 ASS 183

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BLAST of CcUC08G154120 vs. NCBI nr
Match: XP_004144196.1 (60S ribosomal protein L17-2 [Cucumis sativus] >XP_022132326.1 60S ribosomal protein L17-2-like [Momordica charantia] >XP_022962539.1 60S ribosomal protein L17-2-like [Cucurbita moschata] >KAG6598615.1 60S ribosomal protein L17-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364.4 bits (934), Expect = 6.9e-97
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSG 214
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPET LATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 215 ASS 218
           ASS
Sbjct: 181 ASS 183

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BLAST of CcUC08G154120 vs. NCBI nr
Match: XP_023545223.1 (60S ribosomal protein L17-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 362.8 bits (930), Expect = 2.0e-96
Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLVKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSG 214
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPET LATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 215 ASS 218
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of CcUC08G154120 vs. NCBI nr
Match: XP_008445497.1 (PREDICTED: 60S ribosomal protein L17-2-like [Cucumis melo])

HSP 1 Score: 361.3 bits (926), Expect = 5.8e-96
Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETA AIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSG 214
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPET LATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 215 ASS 218
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of CcUC08G154120 vs. NCBI nr
Match: XP_022997268.1 (60S ribosomal protein L17-2-like [Cucurbita maxima])

HSP 1 Score: 360.5 bits (924), Expect = 9.9e-96
Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSG 214
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE VKKEPET LATGKPKKGQA+RSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVKKEPETQLATGKPKKGQALRSG 180

Query: 215 ASS 218
           ASS
Sbjct: 181 ASS 183

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BLAST of CcUC08G154120 vs. ExPASy Swiss-Prot
Match: P51413 (60S ribosomal protein L17-2 OS=Arabidopsis thaliana OX=3702 GN=RPL17B PE=2 SV=2)

HSP 1 Score: 311.6 bits (797), Expect = 6.9e-84
Identity = 156/176 (88.64%), Postives = 162/176 (92.05%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQA 211
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPET LA  K KK  A
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKSAA 175

[Close]
BLAST of CcUC08G154120 vs. ExPASy Swiss-Prot
Match: Q93VI3 (60S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.5e-83
Identity = 155/174 (89.08%), Postives = 162/174 (93.10%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYS+EPDN TKSCKARG+DLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKG 209
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPET LA  K KKG
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKG 173

[Close]
BLAST of CcUC08G154120 vs. ExPASy Swiss-Prot
Match: O48557 (60S ribosomal protein L17 OS=Zea mays OX=4577 GN=RPL17 PE=2 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.1e-80
Identity = 148/170 (87.06%), Postives = 158/170 (92.94%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYS+EP NPTKS KA G DLRVHFKNTRETA A+RKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RR+CGGVGRTAQAK+RHSNGQGRWPVKSA+FILDLLKNAESNA+VKGLDVD L+VSHIQV
Sbjct: 61  RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGK 205
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKE +  +A  K
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 170

[Close]
BLAST of CcUC08G154120 vs. ExPASy Swiss-Prot
Match: P35266 (60S ribosomal protein L17-1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-78
Identity = 143/167 (85.63%), Postives = 153/167 (91.62%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYS +P NPTKS KA G DLRVHFKNTRETA A+RK+PL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSTDPANPTKSAKAMGRDLRVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RR+C GVGRTAQ KNR  NGQGRWP KSAKF+LDLLKNAESNAEVKGLDVD L++SHIQV
Sbjct: 61  RRYCRGVGRTAQVKNRQPNGQGRWPAKSAKFVLDLLKNAESNAEVKGLDVDALYISHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLA 202
           NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE E+H+A
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESHIA 167

[Close]
BLAST of CcUC08G154120 vs. ExPASy Swiss-Prot
Match: P35267 (60S ribosomal protein L17-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 6.3e-77
Identity = 141/170 (82.94%), Postives = 153/170 (90.00%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSR+P NPTKS KA G DLRVHFKNTRETA A+R++PL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSRDPSNPTKSAKACGKDLRVHFKNTRETAFALRRMPLGKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RR+C GVGRTAQ KNR  NGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L++SHIQV
Sbjct: 61  RRYCRGVGRTAQVKNRQPNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDNLYISHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGK 205
           NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE +  +A  K
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEADNVVAPRK 170

[Close]
BLAST of CcUC08G154120 vs. ExPASy TrEMBL
Match: A0A6J1BRY8 (60S ribosomal protein L17-2-like OS=Momordica charantia OX=3673 GN=LOC111005205 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.3e-97
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSG 214
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPET LATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 215 ASS 218
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of CcUC08G154120 vs. ExPASy TrEMBL
Match: A0A6J1HHD8 (60S ribosomal protein L17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462939 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.3e-97
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSG 214
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPET LATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 215 ASS 218
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of CcUC08G154120 vs. ExPASy TrEMBL
Match: A0A1S3BCV8 (60S ribosomal protein L17-2-like OS=Cucumis melo OX=3656 GN=LOC103488496 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 2.8e-96
Identity = 181/183 (98.91%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETA AIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSG 214
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPET LATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 215 ASS 218
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of CcUC08G154120 vs. ExPASy TrEMBL
Match: A0A6J1KDD3 (60S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111492225 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.8e-96
Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSG 214
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE VKKEPET LATGKPKKGQA+RSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVKKEPETQLATGKPKKGQALRSG 180

Query: 215 ASS 218
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of CcUC08G154120 vs. ExPASy TrEMBL
Match: A0A6J1KKP7 (60S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111496586 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 178/183 (97.27%), Postives = 179/183 (97.81%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLVKAKRYLEDVLAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLL NAESNAEVKGLDVDLLHVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLVNAESNAEVKGLDVDLLHVSHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQAIRSG 214
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPET LATGK KKG+AIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKSKKGRAIRSG 180

Query: 215 ASS 218
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of CcUC08G154120 vs. TAIR 10
Match: AT1G67430.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 311.6 bits (797), Expect = 4.9e-85
Identity = 156/176 (88.64%), Postives = 162/176 (92.05%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQA 211
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPET LA  K KK  A
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKSAA 175

[Close]
BLAST of CcUC08G154120 vs. TAIR 10
Match: AT1G27400.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-84
Identity = 155/174 (89.08%), Postives = 162/174 (93.10%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYS+EPDN TKSCKARG+DLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKG 209
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPET LA  K KKG
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKG 173

[Close]
BLAST of CcUC08G154120 vs. TAIR 10
Match: AT1G67430.2 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 209.9 bits (533), Expect = 2.0e-54
Identity = 117/176 (66.48%), Postives = 121/176 (68.75%), Query Frame = 0 

Query: 35  MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 94
           MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60

Query: 95  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 154
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNA                 
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNA----------------- 120

Query: 155 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETHLATGKPKKGQA 211
                                      ELILSEKEEPVKKEPET LA  K KK  A
Sbjct: 121 ---------------------------ELILSEKEEPVKKEPETQLA-AKSKKSAA 131

The following BLAST results are available for this feature:
BLAST of CcUC08G154120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038885177.15.3e-9799.4560S ribosomal protein L17-2-like [Benincasa hispida][more]
XP_004144196.16.9e-9798.9160S ribosomal protein L17-2 [Cucumis sativus] >XP_022132326.1 60S ribosomal prot... [more]
XP_023545223.12.0e-9698.3660S ribosomal protein L17-2-like [Cucurbita pepo subsp. pepo][more]
XP_008445497.15.8e-9698.91PREDICTED: 60S ribosomal protein L17-2-like [Cucumis melo][more]
XP_022997268.19.9e-9697.8160S ribosomal protein L17-2-like [Cucurbita maxima][more]
BLAST of CcUC08G154120 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P514136.9e-8488.6460S ribosomal protein L17-2 OS=Arabidopsis thaliana OX=3702 GN=RPL17B PE=2 SV=2[more]
Q93VI31.5e-8389.0860S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1[more]
O485572.1e-8087.0660S ribosomal protein L17 OS=Zea mays OX=4577 GN=RPL17 PE=2 SV=1[more]
P352661.1e-7885.6360S ribosomal protein L17-1 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
P352676.3e-7782.9460S ribosomal protein L17-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
BLAST of CcUC08G154120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BRY83.3e-9798.9160S ribosomal protein L17-2-like OS=Momordica charantia OX=3673 GN=LOC111005205 ... [more]
A0A6J1HHD83.3e-9798.9160S ribosomal protein L17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462939 P... [more]
A0A1S3BCV82.8e-9698.9160S ribosomal protein L17-2-like OS=Cucumis melo OX=3656 GN=LOC103488496 PE=3 SV... [more]
A0A6J1KDD34.8e-9697.8160S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111492225 PE=... [more]
A0A6J1KKP71.2e-9497.2760S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111496586 PE=... [more]
BLAST of CcUC08G154120 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G67430.14.9e-8588.64Ribosomal protein L22p/L17e family protein [more]
AT1G27400.11.1e-8489.08Ribosomal protein L22p/L17e family protein [more]
AT1G67430.22.0e-5466.48Ribosomal protein L22p/L17e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036394Ribosomal protein L22/L17 superfamilyGENE3D3.90.470.10Ribosomal protein L22/L17coord: 35..215
e-value: 9.1E-76
score: 255.6
IPR036394Ribosomal protein L22/L17 superfamilySUPERFAMILY54843Ribosomal protein L22coord: 35..188
IPR001063Ribosomal protein L22/L17PFAMPF00237Ribosomal_L22coord: 51..186
e-value: 1.2E-38
score: 131.5
IPR001063Ribosomal protein L22/L17CDDcd00336Ribosomal_L22coord: 49..185
e-value: 1.89977E-36
score: 121.829
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealTIGRFAMTIGR01038TIGR01038coord: 38..188
e-value: 9.4E-61
score: 202.1
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealPANTHERPTHR1159360S RIBOSOMAL PROTEIN L17coord: 35..217
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealHAMAPMF_01331_ARibosomal_L22_Acoord: 34..188
score: 24.731222
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..217
NoneNo IPR availablePANTHERPTHR11593:SF3560S RIBOSOMAL PROTEIN L17-2-LIKEcoord: 35..217
IPR018260Ribosomal protein L22/L17, conserved sitePROSITEPS00464RIBOSOMAL_L22coord: 161..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G154120.1CcUC08G154120.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome