CcUC08G152790 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G152790
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionlight-harvesting complex-like protein OHP2, chloroplastic
LocationCicolChr08: 21166568 .. 21174369 (-)
RNA-Seq ExpressionCcUC08G152790
SyntenyCcUC08G152790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAAACTTAAGAGTTTGAAAGGCCATAATTTTTCTTAGTTCATTCTCAAAATTCGTCAATGGCTTGTATTTTTCTGAAACTTGGCGACATCTTATCCACACCAAACATATCCCTAAATCCCAATCTCATTTCTCTCAACCAAAATCAATCTTTGACTTCAATTCCCCATTCCCTGAATTCCATTTTCACTTCCACACACAATTTTCTGAAATGTCGGGGGCTTGTTCAATCCCCTTTGCCAAGATCAAAATCCCTTCCACTTCCTCATCGCCGGCCGCCGCTTCTCCCTCCGCCTCCGCCTCCGCCTCCTCTTCCGCTTCTTCATCCTCGCCTCACACTTCCATCCGATTCTCCTCCTCCAAGCCTTTCGTCTTCACCATTAGGAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCGCGGCTCCTTCTCTCAGAGACCCGTCGCCGCCTTCGCCGACGCCTCCTCTTAAGCCTACTCCTCCGACGCAATCGCCTCCGCCTCCGGCGTCTCCTGTTTCGAAACAGGATAATGTGATCACATTGGAGTTCCAGAGACAGAGGGCTAAGGAGCTTCAGGAGTATTTTAAGCAAAAGAAGCTTGATGAAGCTGATCAGGGACCCTTCTTTGGCTTCATTGGGAAGAATGAAATTTCCAATGGGAGGTCGATTTCATTTCCCTCTTTTTCTACTTTGATTCTGTTGTGATTACTAAAATTTGAAGGGGATATATTCTCATTTGTTCTTGCTGGCTGTTATGATATTTCTGCTGCAATTTAATTAATAATAATATAGGTCTTGGCGTCTTGCCTGCAATTGACTGCCATTTGACTAATTCTCTTTTTGTATTTTTATTTCGATTTTCTTCTTTGAATTCTCTTAATGGGATGCAATTCCTAGCTTTCCGGGAATTTAATATTATATGGATTATTGATTATAATCACTCATAAAGAAAATGGACTTCTCGAAGAAAGGTGAGACTGAAAATCACAGTAAGGAAAGTTGGAGGGAACAAATATAAATTTTGAAAACATGAAAACCAAAATCGAAATGGTTATAATATTTCTATGTTTTTTATGCTACTTGTTTGAACTTCCCATCAGGACAAAGAATTTTCTTTGACTTGGTGCCAACTGCCAAGAGGCTTCAAATTCGACTATTTTCCAGTTAATTTTGCAGTTTTGATTGTATTCATGTGCCTAAACCCCATTTCTTTCTTTATCTTTATGGATAAGGATAACCAATTCATTTCCAATGTAGAGTCGTTTGCAACACTTCCTCTGTTTGAATAATCATATCCACTGTTTTTTCTGCTGATTTTATTCAGACTTCAAGGGCTTTCCTCTTCAATTTATTCCTAAAGATTTGCATCTGATTGACTGAATCTTAGTAGGGGTGTACACTCTTTGGGGTGGTTTTTTGGACCAATCCAAAAATTCGGGTTGGAAAGACTTTAATGGGATCTCCAACCCAACCTTTAGAATTCGAGTTGAGTTGGGATGGGTTGTTGGACATTTTTTTTCTTATAATTTAAAATGCTTAAAATTATCTACAACACATAACTAATAACTAAAATGTCTATAACTAAAATTTCATAAAACTCAAATGCTAGATACCAAATATCCATGATATTTATTACAAACTTTAAAAGAGACAAACATTATAACAATCCTAAGAGAAAAACATTAAAATTTCACAAATCCACCATAGTCAGCCAAACATTAAACAAAGACAATATATATATATAAAATTCAAGTTGAGTTGGGTCAACGTACATTTTGGGTTGAATAGTCCGAGTTGAACACCCCTAGTTGCTAGTAGAAATCAGCTGTTCAGTTTACTGTTAATGGGTAGGTCTTCACGACTCTTACTGGGTTGTTTTTTCATTAAACAGGTGGGCTATGTTTGGTTTTGCTGTTGGATTACTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAGTAGATCTCGAATGACACAATGGTCCAGGTCAATGTTGCTATATTTTTCCAATTTCTGTAATTTATGTATCTACATCTGGTAATTCATCTGATAGTCTTCATGAGAGTTTTGTTGTCTGATACACTTAATTGCCATTCAAGTGTGTGCTCCTTGCAATACTTACTGTTTTTCTGTTATATATAAAGTCTTCCTTTTCTTTATGAGTCTGTGTACTTCACTGGGAGTGGGAGCTTATTAGCTATTCAAACTTGCTAAACTTCTGTACCTTCATTCATTGAAAGTTACATTTACATAATAAAAACCTTGAAAATATGATACATTTCTTCTTACTTTTATTACTAACATTGCTTCCTGCCGCATCACTATTCAATTAGAAGGATATACCTGCTTCCAACCTTATTTCGGTTTCAGTCGATAATTTATATTGATAGACATTATCTTATAGTCAGAGTTTCCCTTTAAGCCTTTTACTTCCTGTGTCTTCCTCTCAATTCATTCTTTGTTATATGGAGTGAACCTGTATGTCTAGTTGCCTAGCTTGAATTTTAGTTGAGCAGACCTAAATGGGTGTAGTGGAATGCTTGGTTGCTCTCTCAAAAAACCAGATGAAACCTTTTCTCTGGGGTGTTAAAAAAAAACTGACTACTCTAAATTAAATCACGAGAGTTGAATTGAGTTGAATTGATTGGTTTAGTTCACAGGTTCAAATCACAAGTTGGTTCAGCCAAAAATATATTCCTCTTTGTAATTGAACTATTTCATTGTGTTTCTTATTCATTGTTGTGTTCATTCTCTCTCCGGTTCTTTTTTACATCTTTGGTTTGTCATCTCCCTTCATCCATTGAGTTTTTATCATCTCTCCTCTCCTTGTTGCATTCTCTCCTCTCCTTGTTGCATTCTCTCCTTATCTTGAACGTAGTCATCACTCGTCCGTCACTCTTTCTTGTTCTCTCCCAACCATCATTTGTTGTACCATTGATTGTATCCTCTCCTTGTTGCATTCTCTCCTTATCTTGAACATAGTCATCACTCGTCCGTCACTCTTTCTTGTTCTCTCCCAACCATCATTTGTTGTACCATTGATTGTATTTTTGTATTTATTTTTCATACCGCCCAAAGTCGAATGGGCCCAATTCAGTAATATCGGGTTGAGTTGGGTTGTTATATTAGTTGAGTTCTAAATTTAGATCGGTAAAAAAAATTACTCCAACCCAATTTATATAAACTTATTCTTTCTCCACTCTTTTGCATGAGATTCTTGTCACTTTCTCCTAAAACGTAATGGATCACATTTCACTAAAATTTCCACAATAGAAAAGTACCAAGTAAAAAACACTTTTATGTGCAAACTTCTACCTAATCAAAATGTGATTTCATATTAACATTTTTTAAAGATCAAACCATACAAACCATACGGAGGTGAAAATTTGTACTTCTAAGTTGGTGTTTAACGCCTCCAACAACTTAACTATGCTCATAAAATGATTTAACATTAAAACCTAACTTACCTAATTTAATTTCCCTTGTTCCATTTGATATTAAGAGTAGGCACAACCAACCTAACATGACAACTCTAACTAATATGAGAAGATGATTAAAAAGAAAAAGAAGGAAAAAAAAAAAATTGAAAGATTAGGTGAATACAAATGCACTTGCATGCAAGAATTCTTTTTTTAAAAAAAAACTTGAAAATATTACAAGTTCATGATAGTAATTACACAATAACAATATAAAGCACTAGTAAAACACATCATCATCAAGTTTGAGTTAGTTTCATATTATGGTTGTAAATATTCCAATTTCTCTATTTCACCTATATATATATATATATATATATATAAAGAAATAAACACTCAAGAACATCCTCTACATTTGCACCTATTTGAATAATTGGCTCAACACACTATTTACATTCCTTACAATTGAAATGTTGTGCATCTCATCCACATGAAATACCGACGTCGCAGTTGTTGCCAAAATTACTCACTGAGCTTAGTTTGATACTCGTCATCATCACACAACTTCATGTTGCAAATTCGATCCAACAACTCGACCACATTAGACATAGCAGGCCTTTCTCTAGACTTCTCACTCGTGCACAAACAAGCAATCCTAAAATACTCCTTCACATTGGCTTCTATTAGTTCATCCTTGGAAATGCTAGCATCAACCATTTCCATATGTTTATTTTGGGCCACTAAAATCCTAGCCCATTCTATTAAGCCCACTTCTCTGCCGTCCAACACCATAGGCAAATTGGGCCTCTGGCCCATAGCAACCTCAAACATTAAAATCCCAAAACTGTACACGTCAGCCTTCACCGTCGCCACCGTCACTCCGGCCCTGTACTCCGGCGGCATGTAGCCCATAGTTCCGGCGAACTGAGTGGAAACGTGGGAATTAGAAGTCTCAATCATACGGGCCAGCCCAAAATCAGCAATATGGGCCTCGAATTCGGAGTCCAATAAGACATTGCCGGCCTTAATATCTCTATGGATAATGGGCTGAGGAAGCCCATGTAAATAGGAAAGCCCATTAGCAACGCCTCTCATGATCTTCAATCTGGTCTCCCATGGCAATGGCTGCCGTGAGGGCAAATAACCATTGGAGTCCTGATCGGCCTCCGCCGAAGTCGAGGTCTCGTACAAGCAATTATCGAGACTTCCTCTCTCGATAAATTCGTAGATCAAGAGCCTATCGGAGCCGGAAACACAATATCCTAAGATTTTGACGATGTTCCGATGGCGGAGTTTTCCGAGAGTTTCCATCTCGGCTCGGAATTCTCGGAATCCTTGGAAGGCGTCAGGATTGAGTTTCTTGATGGCGACGGTAGCGCCGGAGGAAAGGCGAGCCTTGTACACAAGGCCGAAGGAGCCATCACCGACGATTAAATCGTTGCTGAAATTCTTGGTAGCGATTCGGAGTTCAGCCATGGAGATTCTGAGGGAAGGATCGAAGGAGGCGCTCTCATCGACGGTGATGGAGGAGAGATCTAAATTGCGGTCGCGAACTTGCTGCTGACGGGTGGTTGGATGCTTGGATTTGTAGTGTTGGCAGAGGAAGAAGATGCAGAAGAGGAATAAGGTTGCGACGGAGAAACTGGCGATGGATGCGAGAATTAGGGCTGAGGAGGGTTGCATGGCCTGATCTGATCTGAATTGTTCTGATCCGAGAGAGGAAGTGGAAGGAATTTCAATGGCGAAATGAGAGATTGGAGAAAGAGGAAGAAGAAAAGGAAGGTAAAGAGAAGGCGGCGACTGGTAGTGAAGATTAGGAAGGAGGTTTCCGCGAATCTGCCATTGCGGTTTTGGGGTTGCTACTCAATAATTCCAGTAATATATGTGTTTCAAATAGTCAACTTCTTTATTTTATTTATTTATTATGATTAAAAAAAAATTACTACAATAAGTGGGACCTAATCATCATACACCTAAATAATATTTTGGTTCTTATACTTTTTAGTATTAGTGTTTATGATTGATAGATGATAATGGTCTATCGCCATATTAGATAATTAATATATTCCTAAATAAGTTGACTCATTTTGTTACATTTGAAAAGCAACCTTGCTTTTTACTTTTAGTTTTTAAACTTTCAATGGTTTAATTTTAGTTTTTAAGCTTTCAATTGTTTAATTTTAGTTTTTGTGTTTTCAGTTAATCTTAAATTTAGTCTAAATGTAAGTTTATTGTTGATTTTTTATTAAAAAAGTGTTTTTAATAACATTTTTATTACAAATTTTGAAAATATATTCACTGTGTTTCAATTCATTTTCACGAAGCTATTGTTATTATTTAATCAAAAATTAATTTTGATGGACTAAATTTGAGATTTATTGAAAGTATAAGGACTAAAATTAGACAATTGAAAGTATAGAGGCTAAAATTAAACAAACTTTAAAGTATGAGGATCAAAATGATATTTTAATACCCTTTTAGTACAACAATTCCATAAATTTATGCTAGTTGAACTATGTTTATTTTGGCTATTAAGTGGGAAGAATTGTTTATTCATGGTCTAAAAAATTAATAAGTTATGCACTTGCTATTTCTTAGTTGTGGACCACAAACTCTTTGTTAATCAAAATTTAATATATTAGAGTTAATGAAAATGTAACTGCCCATAAGATGTTGATGGAAATTTTTAAATATTTTTTATTATATTTACATTAGTGATAATTTTGTTGTTTATTTTTTTGTGTTTAATAAAAATACCAATTCAAGATTTAGGTTGATGTTGAACCAATGGAAATATAAAAAGAAAAATATTTGGTTGCATCTCAAACTATACCTATCTTGCTGTAGCCCACCCAAATGCCTAATTATAAGTTATCATGTGACAAATTAATTTTATTATTTAGTTTATAATATTTTGTTTTCTTTGTAATTAAAAAGAATGCCCACCCTTGGCTTTCTAGAGAGTGGCGTCGTGTGCTTCTTCAAGTGCCTCCTTGCCTGCAAGGTCGTGTACTGGTTTTTTTCTTTTTTTTTCTGATAATGGTGGTTGGAATGAGGAGTTGATCGAAGCAAATTTCATCCCTATTGATGCAAAATTCATTCTTCAGATTCAAAGATCGAGGGGCAGACACAATATGAGATCATTTGGGATCTTGACAATAAGGGAGTATTCTTTGTTTAAACTACTTATTTTTTTTTGGTATTAAGCTTGCTAATTTGAATGCAACTAACTCGTCGAGGGGACAACCTCCAAATCTATGAGGCAATCCCTCTAGAAGTCGAACCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCAGGCTAAGATCTGCTGCTAGAGAATTGTCATCAACATTTTTCCCACTAAATATAATCTTTCCAAAAATGATGTTCATCCTGATATGGGGTGTATGTTTTGCAGGAAGCATGTTTAAAATTCAGACCACCTTATTTAGAGCTGCTCGGTGTCAAGCGGAGATATGGTCTAGGATTATTTCATCTGATATTGAGGTTTTTTGGAATGACAGGTCTCACTAGAGTTATCAAGACTACTGGCAGTGGATCTTTGAGCATGTGTCTCTTGCTGATATCGATAAGATCGTGATTGTGGTGTGGCAACATGGGGAAGCTCGAAATAAAGTGATGTTTCTAAAACAACGGGTTGATGCTGAGCCTATTTGTGATGCGATTGCGAAGCTTCTTTCATATTCTAATTTTTATGGCAAGCACCTCGATCATAAAGGAAATGGTTGATCCTTCCTACCCACAACCCAACTAAGATTGGTTGGAACCCTCTGATCCATCCTTTTAGAAGTTGGAATGCTAATTCCAATTTTGGAGGTTTGGGTTGGGTGCTTTGAGATCATTTGGTTCGTGTGCGCTTAGCTAGCTTGAAGTTTGTTCCTAGATGTCAGATGGTGAAGGTCCTTAAAGGTATGGTCATTTGCTTTAGGCTTGAGATTTTGTTGTCTATTAGGGTTTCGAATATTTTGGTAGAGTCTGATTGCTTGGAGGTCAACAATTTGTTGAGTGATGTTGCTGTCGACTATTCTGAAATCTCCTTCTTTGTTAAGGAGACTTTAGATAGAGATAGAGATTTGGAAGTTGTCTCCTTTTCCCATTTTCGTCGTAGTCAGAAG

mRNA sequence

AAAAAAAAAAAACTTAAGAGTTTGAAAGGCCATAATTTTTCTTAGTTCATTCTCAAAATTCGTCAATGGCTTGTATTTTTCTGAAACTTGGCGACATCTTATCCACACCAAACATATCCCTAAATCCCAATCTCATTTCTCTCAACCAAAATCAATCTTTGACTTCAATTCCCCATTCCCTGAATTCCATTTTCACTTCCACACACAATTTTCTGAAATGTCGGGGGCTTGTTCAATCCCCTTTGCCAAGATCAAAATCCCTTCCACTTCCTCATCGCCGGCCGCCGCTTCTCCCTCCGCCTCCGCCTCCGCCTCCTCTTCCGCTTCTTCATCCTCGCCTCACACTTCCATCCGATTCTCCTCCTCCAAGCCTTTCGTCTTCACCATTAGGAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCGCGGCTCCTTCTCTCAGAGACCCGTCGCCGCCTTCGCCGACGCCTCCTCTTAAGCCTACTCCTCCGACGCAATCGCCTCCGCCTCCGGCGTCTCCTGTTTCGAAACAGGATAATGTGATCACATTGGAGTTCCAGAGACAGAGGGCTAAGGAGCTTCAGGAGTATTTTAAGCAAAAGAAGCTTGATGAAGCTGATCAGGGACCCTTCTTTGGCTTCATTGGGAAGAATGAAATTTCCAATGGGAGGTGGGCTATGTTTGGTTTTGCTGTTGGATTACTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAGTAGATCTCGAATGACACAATGGTCCAGGTCTCACTAGAGTTATCAAGACTACTGGCAGTGGATCTTTGAGCATGTGTCTCTTGCTGATATCGATAAGATCGTGATTGTGGTGTGGCAACATGGGGAAGCTCGAAATAAAGTGATGTTTCTAAAACAACGGGTTGATGCTGAGCCTATTTGTGATGCGATTGCGAAGCTTCTTTCATATTCTAATTTTTATGGCAAGCACCTCGATCATAAAGGAAATGGTTGATCCTTCCTACCCACAACCCAACTAAGATTGGTTGGAACCCTCTGATCCATCCTTTTAGAAGTTGGAATGCTAATTCCAATTTTGGAGGTTTGGGTTGGGTGCTTTGAGATCATTTGGTTCGTGTGCGCTTAGCTAGCTTGAAGTTTGTTCCTAGATGTCAGATGGTGAAGGTCCTTAAAGGTATGGTCATTTGCTTTAGGCTTGAGATTTTGTTGTCTATTAGGGTTTCGAATATTTTGGTAGAGTCTGATTGCTTGGAGGTCAACAATTTGTTGAGTGATGTTGCTGTCGACTATTCTGAAATCTCCTTCTTTGTTAAGGAGACTTTAGATAGAGATAGAGATTTGGAAGTTGTCTCCTTTTCCCATTTTCGTCGTAGTCAGAAG

Coding sequence (CDS)

ATGTCGGGGGCTTGTTCAATCCCCTTTGCCAAGATCAAAATCCCTTCCACTTCCTCATCGCCGGCCGCCGCTTCTCCCTCCGCCTCCGCCTCCGCCTCCTCTTCCGCTTCTTCATCCTCGCCTCACACTTCCATCCGATTCTCCTCCTCCAAGCCTTTCGTCTTCACCATTAGGAGCTCTCAGACCGAAGGCCCTCTTCGGAGACCCGCGGCTCCTTCTCTCAGAGACCCGTCGCCGCCTTCGCCGACGCCTCCTCTTAAGCCTACTCCTCCGACGCAATCGCCTCCGCCTCCGGCGTCTCCTGTTTCGAAACAGGATAATGTGATCACATTGGAGTTCCAGAGACAGAGGGCTAAGGAGCTTCAGGAGTATTTTAAGCAAAAGAAGCTTGATGAAGCTGATCAGGGACCCTTCTTTGGCTTCATTGGGAAGAATGAAATTTCCAATGGGAGGTGGGCTATGTTTGGTTTTGCTGTTGGATTACTGACAGAGTATGCAACTGGTTCAAACTTTGTTGATCAAGTAAAGATCCTTCTCTCAAATTTTGGGATAGTAGATCTCGAATGA

Protein sequence

MSGACSIPFAKIKIPSTSSSPAAASPSASASASSSASSSSPHTSIRFSSSKPFVFTIRSSQTEGPLRRPAAPSLRDPSPPSPTPPLKPTPPTQSPPPPASPVSKQDNVITLEFQRQRAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLE
Homology
[Close]
BLAST of CcUC08G152790 vs. NCBI nr
Match: XP_038884716.1 (light-harvesting complex-like protein OHP2, chloroplastic [Benincasa hispida])

HSP 1 Score: 304.3 bits (778), Expect = 7.3e-79
Identity = 176/191 (92.15%), Postives = 179/191 (93.72%), Query Frame = 0 

Query: 1   MSGACSIPFAKIKIPSTSSSPAAASPSASASASSSASSSSPHTSIRFSSSKPFVFTIRSS 60
           MSGACSIPFAKIKIP  SSSPAAA  S SASASSSASSSSPHTS+RFSSSKPFVFTIRSS
Sbjct: 1   MSGACSIPFAKIKIPPPSSSPAAA-VSPSASASSSASSSSPHTSLRFSSSKPFVFTIRSS 60

Query: 61  QTEGPLRRPAAPSLRDPSPP---SPTPPLKPTPPTQSPPPPASPVSKQDNVITLEFQRQR 120
           QTEGPLRRPAAPSLR+PSPP   SPTPPLKPTPP QSPP P SPV KQDNVITLEFQRQ+
Sbjct: 61  QTEGPLRRPAAPSLREPSPPSPSSPTPPLKPTPPPQSPPSPVSPVVKQDNVITLEFQRQK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIVDLE 189
           LLSNFGIVDLE
Sbjct: 181 LLSNFGIVDLE 190

[Close]
BLAST of CcUC08G152790 vs. NCBI nr
Match: XP_023551626.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.7 bits (740), Expect = 1.9e-74
Identity = 168/191 (87.96%), Postives = 175/191 (91.62%), Query Frame = 0 

Query: 1   MSGACSIPFAKIKIPSTSSSPAAASPSASASASSSASSSSPHTSIRFSSSKPFVFTIRSS 60
           MSGACSIPFAKIKIP+TSSSPA ASP  SASA+SSASSSS H+SIRFSSSKPFVFTIRSS
Sbjct: 1   MSGACSIPFAKIKIPATSSSPATASP--SASATSSASSSSAHSSIRFSSSKPFVFTIRSS 60

Query: 61  QTEGPLRRPAAPSLRD---PSPPSPTPPLKPTPPTQSPPPPASPVSKQDNVITLEFQRQR 120
           QTEGPLRRPAAPSLR+   PSPPSPTPPLKPTPP    PP  +  +K DNVITLEFQRQ+
Sbjct: 61  QTEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQRQK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIVDLE 189
           LLSNFGIVDLE
Sbjct: 181 LLSNFGIVDLE 189

[Close]
BLAST of CcUC08G152790 vs. NCBI nr
Match: XP_022939849.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 288.5 bits (737), Expect = 4.2e-74
Identity = 167/191 (87.43%), Postives = 175/191 (91.62%), Query Frame = 0 

Query: 1   MSGACSIPFAKIKIPSTSSSPAAASPSASASASSSASSSSPHTSIRFSSSKPFVFTIRSS 60
           MSGACSIPFAKIKIP+TSSSPA ASP  SASA+SSASSSS H+SIRFSS+KPFVFTIRSS
Sbjct: 1   MSGACSIPFAKIKIPATSSSPATASP--SASATSSASSSSAHSSIRFSSTKPFVFTIRSS 60

Query: 61  QTEGPLRRPAAPSLRD---PSPPSPTPPLKPTPPTQSPPPPASPVSKQDNVITLEFQRQR 120
           QTEGPLRRPAAPSLR+   PSPPSPTPPLKPTPP    PP  +  +K DNVITLEFQRQ+
Sbjct: 61  QTEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQRQK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIVDLE 189
           LLSNFGIVDLE
Sbjct: 181 LLSNFGIVDLE 189

[Close]
BLAST of CcUC08G152790 vs. NCBI nr
Match: KAG7016405.1 (Light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.7 bits (735), Expect = 7.1e-74
Identity = 167/191 (87.43%), Postives = 174/191 (91.10%), Query Frame = 0 

Query: 1   MSGACSIPFAKIKIPSTSSSPAAASPSASASASSSASSSSPHTSIRFSSSKPFVFTIRSS 60
           MSGACSIPFAKIKIP+TSSSPA ASP  SASA+SSASSSS H+SIRFSSSKPFVFTIRSS
Sbjct: 1   MSGACSIPFAKIKIPATSSSPATASP--SASANSSASSSSAHSSIRFSSSKPFVFTIRSS 60

Query: 61  QTEGPLRRPAAPSLRD---PSPPSPTPPLKPTPPTQSPPPPASPVSKQDNVITLEFQRQR 120
           QTEGPLRRPAAPSLR+   PSPPSPTPPLKP PP    PP  +  +K DNVITLEFQRQ+
Sbjct: 61  QTEGPLRRPAAPSLREPSPPSPPSPTPPLKPNPPPSQTPPSPAYAAKLDNVITLEFQRQK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIVDLE 189
           LLSNFGIVDLE
Sbjct: 181 LLSNFGIVDLE 189

[Close]
BLAST of CcUC08G152790 vs. NCBI nr
Match: XP_022993308.1 (light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 286.2 bits (731), Expect = 2.1e-73
Identity = 166/191 (86.91%), Postives = 174/191 (91.10%), Query Frame = 0 

Query: 1   MSGACSIPFAKIKIPSTSSSPAAASPSASASASSSASSSSPHTSIRFSSSKPFVFTIRSS 60
           MSGACSIPFAKIKIP+ SSSPA ASP  SASA+SSASSSS H+SIRFSSSKPFVFTIRSS
Sbjct: 1   MSGACSIPFAKIKIPAASSSPATASP--SASATSSASSSSAHSSIRFSSSKPFVFTIRSS 60

Query: 61  QTEGPLRRPAAPSLRD---PSPPSPTPPLKPTPPTQSPPPPASPVSKQDNVITLEFQRQR 120
           QTEGPLRRPAAPSLR+   PSPPSPTPPLKPTPP+   PP  +  +K DNVITLEFQRQ+
Sbjct: 61  QTEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPSSQTPPSPAYAAKLDNVITLEFQRQK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDE DQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEDDQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIVDLE 189
           LLSNFGIVDLE
Sbjct: 181 LLSNFGIVDLE 189

[Close]
BLAST of CcUC08G152790 vs. ExPASy Swiss-Prot
Match: Q9FEC1 (Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OHP2 PE=1 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 7.9e-44
Identity = 109/159 (68.55%), Postives = 127/159 (79.87%), Query Frame = 0 

Query: 33  SSSASSSSPHTSIRFS-SSKPFVFTIRSSQTEGPLRRPAA-PSLRDPSPPSPTPPLKP-T 92
           SSS+SSS+  +S RFS ++KP VF IR SQTEGPLRRP+A P+LR+P    P PP +P +
Sbjct: 16  SSSSSSSTASSSFRFSTTTKPCVFIIRCSQTEGPLRRPSAPPTLREPQ--KPVPPSQPSS 75

Query: 93  PPTQSPPPPASPVSKQDNVITLEFQRQRAKELQEYFKQKKLDEADQGPFFGFIGKNEISN 152
            P  SPPP  +      +V T+EFQRQ+AKELQEYFKQKKL+ A QGPFFGF  KNEISN
Sbjct: 76  SPPPSPPPQKAVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAAGQGPFFGFQPKNEISN 135

Query: 153 GRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLE 189
           GRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DLE
Sbjct: 136 GRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

[Close]
BLAST of CcUC08G152790 vs. ExPASy TrEMBL
Match: A0A6J1FIC8 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445596 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.0e-74
Identity = 167/191 (87.43%), Postives = 175/191 (91.62%), Query Frame = 0 

Query: 1   MSGACSIPFAKIKIPSTSSSPAAASPSASASASSSASSSSPHTSIRFSSSKPFVFTIRSS 60
           MSGACSIPFAKIKIP+TSSSPA ASP  SASA+SSASSSS H+SIRFSS+KPFVFTIRSS
Sbjct: 1   MSGACSIPFAKIKIPATSSSPATASP--SASATSSASSSSAHSSIRFSSTKPFVFTIRSS 60

Query: 61  QTEGPLRRPAAPSLRD---PSPPSPTPPLKPTPPTQSPPPPASPVSKQDNVITLEFQRQR 120
           QTEGPLRRPAAPSLR+   PSPPSPTPPLKPTPP    PP  +  +K DNVITLEFQRQ+
Sbjct: 61  QTEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPPSQTPPSPAYAAKLDNVITLEFQRQK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIVDLE 189
           LLSNFGIVDLE
Sbjct: 181 LLSNFGIVDLE 189

[Close]
BLAST of CcUC08G152790 vs. ExPASy TrEMBL
Match: A0A6J1K1U3 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489352 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.0e-73
Identity = 166/191 (86.91%), Postives = 174/191 (91.10%), Query Frame = 0 

Query: 1   MSGACSIPFAKIKIPSTSSSPAAASPSASASASSSASSSSPHTSIRFSSSKPFVFTIRSS 60
           MSGACSIPFAKIKIP+ SSSPA ASP  SASA+SSASSSS H+SIRFSSSKPFVFTIRSS
Sbjct: 1   MSGACSIPFAKIKIPAASSSPATASP--SASATSSASSSSAHSSIRFSSSKPFVFTIRSS 60

Query: 61  QTEGPLRRPAAPSLRD---PSPPSPTPPLKPTPPTQSPPPPASPVSKQDNVITLEFQRQR 120
           QTEGPLRRPAAPSLR+   PSPPSPTPPLKPTPP+   PP  +  +K DNVITLEFQRQ+
Sbjct: 61  QTEGPLRRPAAPSLREPSPPSPPSPTPPLKPTPPSSQTPPSPAYAAKLDNVITLEFQRQK 120

Query: 121 AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180
           AKELQEYFKQKKLDE DQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI
Sbjct: 121 AKELQEYFKQKKLDEDDQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVKI 180

Query: 181 LLSNFGIVDLE 189
           LLSNFGIVDLE
Sbjct: 181 LLSNFGIVDLE 189

[Close]
BLAST of CcUC08G152790 vs. ExPASy TrEMBL
Match: A0A1S3B3J8 (proline-rich receptor-like protein kinase PERK14 OS=Cucumis melo OX=3656 GN=LOC103485601 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.0e-73
Identity = 169/195 (86.67%), Postives = 179/195 (91.79%), Query Frame = 0 

Query: 1   MSGACSIPFAKIKIPSTSSSPA----AASPSASASASSSASSSSPHTSIRFSSSKPFVFT 60
           MSGACSIPFA IKIPSTSSSPA    AASPSASAS SS++SSSS H+S+RF SSKPF+FT
Sbjct: 1   MSGACSIPFANIKIPSTSSSPAATASAASPSASAS-SSASSSSSLHSSLRFHSSKPFLFT 60

Query: 61  IRSSQTEGPLRRPAAPSLRD---PSPPSPTPPLKPTPPTQSPPPPASPVSKQDNVITLEF 120
           IRSSQTEGPLRRP+APSLRD   PSPPSPTPPLKP+PP+QSPP   SPV KQDNVITLEF
Sbjct: 61  IRSSQTEGPLRRPSAPSLRDPSPPSPPSPTPPLKPSPPSQSPP---SPVLKQDNVITLEF 120

Query: 121 QRQRAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVD 180
           QR +AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVD
Sbjct: 121 QRLKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVD 180

Query: 181 QVKILLSNFGIVDLE 189
           QVKILLSNFGI+DLE
Sbjct: 181 QVKILLSNFGIIDLE 191

[Close]
BLAST of CcUC08G152790 vs. ExPASy TrEMBL
Match: A0A6J1HG91 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464005 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.3e-70
Identity = 161/193 (83.42%), Postives = 172/193 (89.12%), Query Frame = 0 

Query: 1   MSGACSIPFAKIKIPSTSSSPAAASPSASASASSSASSSSPHTSIRFSSSKPFVFTIRSS 60
           MSGACS PFAKIKIP+ SSS AA SP  SASA+SS SSSS H+SIRFSSSKPFVFTIRSS
Sbjct: 1   MSGACSFPFAKIKIPTVSSSSAAVSP--SASAASSTSSSSAHSSIRFSSSKPFVFTIRSS 60

Query: 61  QTEGPLRRPAAPSLRDPSPPSPTPPLKPTPPTQSPPPPASP-----VSKQDNVITLEFQR 120
           QT+GP+RRPAAPSLR+PSPPSP PPLKP PP+ +  P A P     V+KQDN ITLEFQR
Sbjct: 61  QTDGPIRRPAAPSLREPSPPSPPPPLKP-PPSSATAPVAQPSGKAYVAKQDNTITLEFQR 120

Query: 121 QRAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQV 180
           Q+AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQV
Sbjct: 121 QKAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQV 180

Query: 181 KILLSNFGIVDLE 189
           KILLSNFGIVDL+
Sbjct: 181 KILLSNFGIVDLD 190

[Close]
BLAST of CcUC08G152790 vs. ExPASy TrEMBL
Match: A0A6J1JS47 (light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487322 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 8.7e-70
Identity = 160/192 (83.33%), Postives = 170/192 (88.54%), Query Frame = 0 

Query: 1   MSGACSIPFAKIKIPSTSSSPAAASPSASASASSSASSSSPHTSIRFSSSKPFVFTIRSS 60
           MSGACS PFAKIKIP+ SSS AA SP  SASA SS SSSS H+SIRFSSSKPFVFTIRSS
Sbjct: 1   MSGACSFPFAKIKIPTVSSSSAAVSP--SASAVSSTSSSSAHSSIRFSSSKPFVFTIRSS 60

Query: 61  QTEGPLRRPAAPSLRDPSPPSPTPPLKPTPPTQ----SPPPPASPVSKQDNVITLEFQRQ 120
           QT+GP+RRPAAPSLR+PSPPSP PPLKPTP +     S P   + V+KQDN ITLEFQRQ
Sbjct: 61  QTDGPIRRPAAPSLREPSPPSPPPPLKPTPTSATAPFSQPSAKAYVAKQDNTITLEFQRQ 120

Query: 121 RAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVK 180
           +AKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVK
Sbjct: 121 KAKELQEYFKQKKLDEADQGPFFGFIGKNEISNGRWAMFGFAVGLLTEYATGSNFVDQVK 180

Query: 181 ILLSNFGIVDLE 189
           ILLSNFGIVDL+
Sbjct: 181 ILLSNFGIVDLD 190

[Close]
BLAST of CcUC08G152790 vs. TAIR 10
Match: AT1G34000.1 (one-helix protein 2 )

HSP 1 Score: 178.3 bits (451), Expect = 5.6e-45
Identity = 109/159 (68.55%), Postives = 127/159 (79.87%), Query Frame = 0 

Query: 33  SSSASSSSPHTSIRFS-SSKPFVFTIRSSQTEGPLRRPAA-PSLRDPSPPSPTPPLKP-T 92
           SSS+SSS+  +S RFS ++KP VF IR SQTEGPLRRP+A P+LR+P    P PP +P +
Sbjct: 16  SSSSSSSTASSSFRFSTTTKPCVFIIRCSQTEGPLRRPSAPPTLREPQ--KPVPPSQPSS 75

Query: 93  PPTQSPPPPASPVSKQDNVITLEFQRQRAKELQEYFKQKKLDEADQGPFFGFIGKNEISN 152
            P  SPPP  +      +V T+EFQRQ+AKELQEYFKQKKL+ A QGPFFGF  KNEISN
Sbjct: 76  SPPPSPPPQKAVAVDGKSVTTVEFQRQKAKELQEYFKQKKLEAAGQGPFFGFQPKNEISN 135

Query: 153 GRWAMFGFAVGLLTEYATGSNFVDQVKILLSNFGIVDLE 189
           GRWAMFGFAVG+LTEYATGS+ VDQVKILLSNFGI+DLE
Sbjct: 136 GRWAMFGFAVGMLTEYATGSDLVDQVKILLSNFGILDLE 172

The following BLAST results are available for this feature:
BLAST of CcUC08G152790 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038884716.17.3e-7992.15light-harvesting complex-like protein OHP2, chloroplastic [Benincasa hispida][more]
XP_023551626.11.9e-7487.96light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita pepo subsp.... [more]
XP_022939849.14.2e-7487.43light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita moschata][more]
KAG7016405.17.1e-7487.43Light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita argyrosperm... [more]
XP_022993308.12.1e-7386.91light-harvesting complex-like protein OHP2, chloroplastic [Cucurbita maxima][more]
BLAST of CcUC08G152790 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FEC17.9e-4468.55Light-harvesting complex-like protein OHP2, chloroplastic OS=Arabidopsis thalian... [more]
BLAST of CcUC08G152790 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FIC82.0e-7487.43light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata ... [more]
A0A6J1K1U31.0e-7386.91light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX... [more]
A0A1S3B3J81.0e-7386.67proline-rich receptor-like protein kinase PERK14 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1HG912.3e-7083.42light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita moschata ... [more]
A0A6J1JS478.7e-7083.33light-harvesting complex-like protein OHP2, chloroplastic OS=Cucurbita maxima OX... [more]
BLAST of CcUC08G152790 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G34000.15.6e-4568.55one-helix protein 2 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..102
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 1..187
NoneNo IPR availablePANTHERPTHR14154:SF83MYB-LIKE PROTEIN Ucoord: 1..187
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 134..177

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G152790.1CcUC08G152790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006850 mitochondrial pyruvate transmembrane transport
biological_process GO:0016310 phosphorylation
cellular_component GO:0009507 chloroplast
cellular_component GO:0031305 integral component of mitochondrial inner membrane
cellular_component GO:0009579 thylakoid
molecular_function GO:0016301 kinase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0050833 pyruvate transmembrane transporter activity