CcUC08G152340 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G152340
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationCicolChr08: 20633639 .. 20635543 (+)
RNA-Seq ExpressionCcUC08G152340
SyntenyCcUC08G152340
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTTCTCCATGTATGCCATTTTGCAGCAAATTCAGGAAGATACAGAGAGAAGGGTAAAGGGATCTTTCAGTTTCTTAGTCTTCGTGTTTGCGCCACTCAATTTTTTGCATCATCATCATCATGCATTGTCGAATGTGAAAAAGCAGTTACAAAGGATTTCTATAATACCTATGTGTCGTATGTGCTTGAAATACTGAAATTATGTGCAAAAAGAAGGTTGTTCTTGCAAGGGAAGGCTTGCCATGCCCAAATTCTGCTAATGGGGTTAAAAACAGACACTTTAACGTCAAACATTCTCATCAATATGTACTCAAAATGTGGTTCAGTTGATTTTGCACGCCAAGTGTTCGATGAAATGCCCAGCCGAAGTTTGGTGTCGTGGAACACCATGATTGGGTCGCTTACTCAGAATGGTGAGGAAAATGAGGCTCTTGGTTTACTACTGCAGATGCAAAGAGAAGGATCCCCTTTTAGTGAATTCACCATTTCAAGTGTCCTTTGTGCATATGCTGCTAAATGTGCTCTTTCTGAATGCCAGCTGCTTCATGCCTTTGCTGTTAAGGCTGCAATGGATTTGAATGTTTTTGTTGCAACTGCATTGCTTAATGTTTATGCAAAATGTGGTTTGATGAAGAATGCGGCTGGTGTTTTTTATTCCATGCCTGAGAGGAGTGTTGTCACATGGAGTTCAATGGCGGCAGGATATGTGCAAAACGAGATGTATGAGGAAGCTTTGGCATTGTTTCGCAAAGCTTGGGAAATTGGGTTGAAACAGGACGAGTTTTTAATGTCATCTGTGATTTGTGCTTGTGCTGGATTGGCAGCCATGATTGAAGGGAAACAGGTGAATGCTTTGCTATTTAAATCTGGTTTTTGTTCAAATATATTTGTTGCTTCGTCTCTTATTGACATGTATGCAAAATGTGGTGGCATTGAAGAAGCTTACAAAGTATTTCGAGATGTAGAAGAGAGAAATGTTGTTTTGTGGAATGCTATGATATCTGGCCTGTCAAGACACGCTTGTTCACTCGAGGTGATGATTTTATTTGAGAAAATGCAGCAGATGGGCTTGAGTCCAAATAATGTTACTTTTGTTTCTGTCTTGTCTGCGTGTGGTCGTATGGGTTTGGTTGAAAAAGGACAAAAATATTTTGACCTGATGATAAAAGAGCATCATTTGGCACCAAATGTCTTACACTATTCCTGCATGGTAGACACTCTTAGCCGGGCAGGGCAGACTTTTGAGGCTTATGATTTGATTAGTAAAATGCCCTTTAATGCCTCTGCTTCTATGTGGGGTTCCCTTTTGGCTTCTTGTAGGACCCATGGGAATCTTGAACTTGCTGAGATTGCTGCTAAAAACTTGTTTGTCATGGAACCACACAATGCAGGAAACTATGTGTTGCTGTCCAACATGTATGCAGCAAATGGTAAGTGGGACGAAGTCGCAAAGGCGAGGAAGCTCCTTAAAGAAAGTGATGTGAAGAAAGAGAAGGGCAAGAGTTGGATCGAGATTAAGGACAAAGTTCACTCGTTTATGGTAGGAGAGATGAATCATCCTAAGATTTCTGAAATTTACTCAAAATTGAATGAGTTAATGGAAGAGTTACAAAAGCTTGGTTACAAGACAGAGACTCAGCATGATCTTCATCAAGTGGGAGAGACTGTAAAACCAGAACTTTTGGGGCACCACAGCGAGAAGCTTGCTTTTACTATGGGATTATTGTTTTTACCTACCAATGCACCTATTAGGATTATGAAAAACCTTAGAATATGTGGAGACTGCCACTCTTTTATGAAGTTTGCCTCAAAATTTGTTCGTAGGAATGTCATAGTCAGGGACACCAACCGATTCCACCATTTTAAGAATGGGTGTTGTTCTTGCGGGGATTTTTGGTGA

mRNA sequence

ATGGGATTTCTCCATGTATGCCATTTTGCAGCAAATTCAGGAAGATACAGAGAGAAGGGTAAAGGGATCTTTCAGTTTCTTAGTCTTCGTGTTTGCGCCACTCAATTTTTTGCATCATCATCATCATGCATTGTCGAATGTGAAAAAGCAGTTACAAAGGATTTCTATAATACCTATGTGTCGTATGTGCTTGAAATACTGAAATTATGTGCAAAAAGAAGGTTGTTCTTGCAAGGGAAGGCTTGCCATGCCCAAATTCTGCTAATGGGGTTAAAAACAGACACTTTAACGTCAAACATTCTCATCAATATGTACTCAAAATGTGGTTCAGTTGATTTTGCACGCCAAGTGTTCGATGAAATGCCCAGCCGAAGTTTGGTGTCGTGGAACACCATGATTGGGTCGCTTACTCAGAATGGTGAGGAAAATGAGGCTCTTGGTTTACTACTGCAGATGCAAAGAGAAGGATCCCCTTTTAGTGAATTCACCATTTCAAGTGTCCTTTGTGCATATGCTGCTAAATGTGCTCTTTCTGAATGCCAGCTGCTTCATGCCTTTGCTGTTAAGGCTGCAATGGATTTGAATGTTTTTGTTGCAACTGCATTGCTTAATGTTTATGCAAAATGTGGTTTGATGAAGAATGCGGCTGGTGTTTTTTATTCCATGCCTGAGAGGAGTGTTGTCACATGGAGTTCAATGGCGGCAGGATATGTGCAAAACGAGATGTATGAGGAAGCTTTGGCATTGTTTCGCAAAGCTTGGGAAATTGGGTTGAAACAGGACGAGTTTTTAATGTCATCTGTGATTTGTGCTTGTGCTGGATTGGCAGCCATGATTGAAGGGAAACAGGTGAATGCTTTGCTATTTAAATCTGGTTTTTGTTCAAATATATTTGTTGCTTCGTCTCTTATTGACATGTATGCAAAATGTGGTGGCATTGAAGAAGCTTACAAAGTATTTCGAGATGTAGAAGAGAGAAATGTTGTTTTGTGGAATGCTATGATATCTGGCCTGTCAAGACACGCTTGTTCACTCGAGGTGATGATTTTATTTGAGAAAATGCAGCAGATGGGCTTGAGTCCAAATAATGTTACTTTTGTTTCTGTCTTGTCTGCGTGTGGTCGTATGGGTTTGGTTGAAAAAGGACAAAAATATTTTGACCTGATGATAAAAGAGCATCATTTGGCACCAAATGTCTTACACTATTCCTGCATGGTAGACACTCTTAGCCGGGCAGGGCAGACTTTTGAGGCTTATGATTTGATTAGTAAAATGCCCTTTAATGCCTCTGCTTCTATGTGGGGTTCCCTTTTGGCTTCTTGTAGGACCCATGGGAATCTTGAACTTGCTGAGATTGCTGCTAAAAACTTGTTTGTCATGGAACCACACAATGCAGGAAACTATGTGTTGCTGTCCAACATGTATGCAGCAAATGGTAAGTGGGACGAAGTCGCAAAGGCGAGGAAGCTCCTTAAAGAAAGTGATGTGAAGAAAGAGAAGGGCAAGAGTTGGATCGAGATTAAGGACAAAGTTCACTCGTTTATGGTAGGAGAGATGAATCATCCTAAGATTTCTGAAATTTACTCAAAATTGAATGAGTTAATGGAAGAGTTACAAAAGCTTGGTTACAAGACAGAGACTCAGCATGATCTTCATCAAGTGGGAGAGACTGTAAAACCAGAACTTTTGGGGCACCACAGCGAGAAGCTTGCTTTTACTATGGGATTATTGTTTTTACCTACCAATGCACCTATTAGGATTATGAAAAACCTTAGAATATGTGGAGACTGCCACTCTTTTATGAAGTTTGCCTCAAAATTTGTTCGTAGGAATGTCATAGTCAGGGACACCAACCGATTCCACCATTTTAAGAATGGGTGTTGTTCTTGCGGGGATTTTTGGTGA

Coding sequence (CDS)

ATGGGATTTCTCCATGTATGCCATTTTGCAGCAAATTCAGGAAGATACAGAGAGAAGGGTAAAGGGATCTTTCAGTTTCTTAGTCTTCGTGTTTGCGCCACTCAATTTTTTGCATCATCATCATCATGCATTGTCGAATGTGAAAAAGCAGTTACAAAGGATTTCTATAATACCTATGTGTCGTATGTGCTTGAAATACTGAAATTATGTGCAAAAAGAAGGTTGTTCTTGCAAGGGAAGGCTTGCCATGCCCAAATTCTGCTAATGGGGTTAAAAACAGACACTTTAACGTCAAACATTCTCATCAATATGTACTCAAAATGTGGTTCAGTTGATTTTGCACGCCAAGTGTTCGATGAAATGCCCAGCCGAAGTTTGGTGTCGTGGAACACCATGATTGGGTCGCTTACTCAGAATGGTGAGGAAAATGAGGCTCTTGGTTTACTACTGCAGATGCAAAGAGAAGGATCCCCTTTTAGTGAATTCACCATTTCAAGTGTCCTTTGTGCATATGCTGCTAAATGTGCTCTTTCTGAATGCCAGCTGCTTCATGCCTTTGCTGTTAAGGCTGCAATGGATTTGAATGTTTTTGTTGCAACTGCATTGCTTAATGTTTATGCAAAATGTGGTTTGATGAAGAATGCGGCTGGTGTTTTTTATTCCATGCCTGAGAGGAGTGTTGTCACATGGAGTTCAATGGCGGCAGGATATGTGCAAAACGAGATGTATGAGGAAGCTTTGGCATTGTTTCGCAAAGCTTGGGAAATTGGGTTGAAACAGGACGAGTTTTTAATGTCATCTGTGATTTGTGCTTGTGCTGGATTGGCAGCCATGATTGAAGGGAAACAGGTGAATGCTTTGCTATTTAAATCTGGTTTTTGTTCAAATATATTTGTTGCTTCGTCTCTTATTGACATGTATGCAAAATGTGGTGGCATTGAAGAAGCTTACAAAGTATTTCGAGATGTAGAAGAGAGAAATGTTGTTTTGTGGAATGCTATGATATCTGGCCTGTCAAGACACGCTTGTTCACTCGAGGTGATGATTTTATTTGAGAAAATGCAGCAGATGGGCTTGAGTCCAAATAATGTTACTTTTGTTTCTGTCTTGTCTGCGTGTGGTCGTATGGGTTTGGTTGAAAAAGGACAAAAATATTTTGACCTGATGATAAAAGAGCATCATTTGGCACCAAATGTCTTACACTATTCCTGCATGGTAGACACTCTTAGCCGGGCAGGGCAGACTTTTGAGGCTTATGATTTGATTAGTAAAATGCCCTTTAATGCCTCTGCTTCTATGTGGGGTTCCCTTTTGGCTTCTTGTAGGACCCATGGGAATCTTGAACTTGCTGAGATTGCTGCTAAAAACTTGTTTGTCATGGAACCACACAATGCAGGAAACTATGTGTTGCTGTCCAACATGTATGCAGCAAATGGTAAGTGGGACGAAGTCGCAAAGGCGAGGAAGCTCCTTAAAGAAAGTGATGTGAAGAAAGAGAAGGGCAAGAGTTGGATCGAGATTAAGGACAAAGTTCACTCGTTTATGGTAGGAGAGATGAATCATCCTAAGATTTCTGAAATTTACTCAAAATTGAATGAGTTAATGGAAGAGTTACAAAAGCTTGGTTACAAGACAGAGACTCAGCATGATCTTCATCAAGTGGGAGAGACTGTAAAACCAGAACTTTTGGGGCACCACAGCGAGAAGCTTGCTTTTACTATGGGATTATTGTTTTTACCTACCAATGCACCTATTAGGATTATGAAAAACCTTAGAATATGTGGAGACTGCCACTCTTTTATGAAGTTTGCCTCAAAATTTGTTCGTAGGAATGTCATAGTCAGGGACACCAACCGATTCCACCATTTTAAGAATGGGTGTTGTTCTTGCGGGGATTTTTGGTGA

Protein sequence

MGFLHVCHFAANSGRYREKGKGIFQFLSLRVCATQFFASSSSCIVECEKAVTKDFYNTYVSYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAKCALSECQLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQNEMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQKLGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSFMKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW
Homology
BLAST of CcUC08G152340 vs. NCBI nr
Match: XP_038884459.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Benincasa hispida] >XP_038884460.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Benincasa hispida] >XP_038884461.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Benincasa hispida])

HSP 1 Score: 1151.7 bits (2978), Expect = 0.0e+00
Identity = 583/641 (90.95%), Postives = 600/641 (93.60%), Query Frame = 0

Query: 1   MGFLHVCHFAANSGRYREKGKGIFQFLSLRVCATQFFA-------SSSSCIVECEKAVTK 60
           MGFL V HFA+NSGRYREKGKGIFQFLS  VC TQFFA       SSSSCIVECEKA+ K
Sbjct: 1   MGFLQVWHFASNSGRYREKGKGIFQFLSPGVCTTQFFASSSSSSSSSSSCIVECEKAIPK 60

Query: 61  DFYNTYVSYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDF 120
           DFY T+VSYVLEILKLCAKRRLFLQGKACHAQIL+MGLKTD LTSNILINMYSKCGSVDF
Sbjct: 61  DFYTTHVSYVLEILKLCAKRRLFLQGKACHAQILVMGLKTDVLTSNILINMYSKCGSVDF 120

Query: 121 ARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAA 180
           ARQ+FDEMPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCA AA
Sbjct: 121 ARQMFDEMPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCACAA 180

Query: 181 KCALSECQLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSM 240
           KCALSECQLLHAFAVKAAMDLNVFVATALL+VYAKCGLMK+AA VF SMPERSVVTWSSM
Sbjct: 181 KCALSECQLLHAFAVKAAMDLNVFVATALLDVYAKCGLMKDAACVFESMPERSVVTWSSM 240

Query: 241 AAGYVQNEMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGF 300
            AGYVQNEMYEEALALF KA E GLK D+FLMSSVICACAGLAAMIEG QVNALL KSGF
Sbjct: 241 VAGYVQNEMYEEALALFCKALETGLKHDQFLMSSVICACAGLAAMIEGNQVNALLSKSGF 300

Query: 301 CSNIFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEK 360
           CSNIFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHA SLEVMILFEK
Sbjct: 301 CSNIFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHARSLEVMILFEK 360

Query: 361 MQQMGLSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAG 420
           MQQMGLSPN+VTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNV HY+CMVDTLSRAG
Sbjct: 361 MQQMGLSPNDVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVFHYACMVDTLSRAG 420

Query: 421 QTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSN 480
           QTFEAYDLISKMPFNAS SMWGSLLASCRTHGNLELAE+AAKNLF +EP NAGNYVLLSN
Sbjct: 421 QTFEAYDLISKMPFNASVSMWGSLLASCRTHGNLELAEVAAKNLFDIEPCNAGNYVLLSN 480

Query: 481 MYAANGKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNE 540
           MYAA GKWD+V KARKLLKESDVKKE+GKSWIEIKDKVHSFM GE+NHPKI EIYSKLNE
Sbjct: 481 MYAAKGKWDDVVKARKLLKESDVKKERGKSWIEIKDKVHSFMAGEINHPKIYEIYSKLNE 540

Query: 541 LMEELQKLGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRI 600
           LM ELQ LGYKTETQHDLHQVGE+ K ELL HHSEKLAFTMGLLFLP NAPIRIMKNLRI
Sbjct: 541 LMGELQMLGYKTETQHDLHQVGESGKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRI 600

Query: 601 CGDCHSFMKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           CGDCHSFMK ASKFVRR+VIVRDTNRFHHFKNGCCSCGDFW
Sbjct: 601 CGDCHSFMKLASKFVRRDVIVRDTNRFHHFKNGCCSCGDFW 641

BLAST of CcUC08G152340 vs. NCBI nr
Match: XP_004140992.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Cucumis sativus] >KAE8646637.1 hypothetical protein Csa_005652 [Cucumis sativus])

HSP 1 Score: 1142.9 bits (2955), Expect = 0.0e+00
Identity = 573/638 (89.81%), Postives = 599/638 (93.89%), Query Frame = 0

Query: 1   MGFLHVCHFAANSGRYREKGKG--IFQFLSLRVCATQFFA--SSSSCIVECEKAVTKDFY 60
           MGFLHVCHFA+NSGRYREKGKG  IFQFLSLRVC TQFFA  SSSSCIVECEK  TKDF 
Sbjct: 1   MGFLHVCHFASNSGRYREKGKGKRIFQFLSLRVCTTQFFASLSSSSCIVECEKPTTKDFN 60

Query: 61  NTYVSYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQ 120
            T+VS+V EILKLCAKR+L LQGKACHAQILLMGLKTD LTSNILINMYSKCGSVDFARQ
Sbjct: 61  ATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQ 120

Query: 121 VFDEMPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAKCA 180
           VFDEMPSRSLVSWNTMIGSLTQNGEENEAL LLLQMQREG+PFSEFTISSVLCA AAKCA
Sbjct: 121 VFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCA 180

Query: 181 LSECQLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAG 240
           LSECQLLHAFA+KAAMDLNVFVATALL+VYAKCGLMK+A  VF SMP+RSVVTWSSMAAG
Sbjct: 181 LSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAG 240

Query: 241 YVQNEMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSN 300
           YVQNEMYE+ALALFRKAWE GLK D+FLMSSVICACAGLAAMIEGKQ+NALL KSGFCSN
Sbjct: 241 YVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSN 300

Query: 301 IFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQ 360
           IFVASSLIDMYAKCGGIEE+YKVFRDVE+RNVVLWNAMISGLSRHA SLEVMILFEKMQQ
Sbjct: 301 IFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQ 360

Query: 361 MGLSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTF 420
           MGLSPN+VTFVSVLSACG MGLV KGQKYFDLM KEHHLAPNV HYSCMVDTLSRAGQ F
Sbjct: 361 MGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIF 420

Query: 421 EAYDLISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYA 480
           EAYDLISK+PFNASASMWGSLLASCRTHGNLELAE+AAK LF +EPHN+GNY+LLSNMYA
Sbjct: 421 EAYDLISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYA 480

Query: 481 ANGKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELME 540
           ANGKWDEVAK RKLLKESDVKKE+GKSWIEIKDKVH FMVGE NHPKI EIYSKLNE+M+
Sbjct: 481 ANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMD 540

Query: 541 ELQKLGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGD 600
           ELQKLGYK ETQHDLHQVGE++K ELL HHSEKLAFTMGLLFLP NAPIRIMKNLRICGD
Sbjct: 541 ELQKLGYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGD 600

Query: 601 CHSFMKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           CHSFMK ASKF  R+VIVRDTNRFHHFKNGCCSCGDFW
Sbjct: 601 CHSFMKLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638

BLAST of CcUC08G152340 vs. NCBI nr
Match: XP_008456610.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g04780 [Cucumis melo])

HSP 1 Score: 1141.7 bits (2952), Expect = 0.0e+00
Identity = 573/642 (89.25%), Postives = 600/642 (93.46%), Query Frame = 0

Query: 1   MGFLHVCHFAANSGRYRE------KGKGIFQFLSLRVCATQFFASS--SSCIVECEKAVT 60
           MGFLHVCHFA+NSGRYRE      KGKGIFQFLSLR+C TQFFASS  SSCIVECEK  +
Sbjct: 1   MGFLHVCHFASNSGRYREKGKGKGKGKGIFQFLSLRLCTTQFFASSSPSSCIVECEKPTS 60

Query: 61  KDFYNTYVSYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVD 120
           KDF  T+VSYV EILKLCAKR+LFLQGKACHAQILLMGLKTD LTSNILIN YSKCGSVD
Sbjct: 61  KDFNATHVSYVHEILKLCAKRKLFLQGKACHAQILLMGLKTDLLTSNILINTYSKCGSVD 120

Query: 121 FARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYA 180
            ARQVFDEMPSRSLVSWNTMIGSLTQNG+ENEALGLLLQMQREG+PFSEFTISSVLCA A
Sbjct: 121 SARQVFDEMPSRSLVSWNTMIGSLTQNGQENEALGLLLQMQREGTPFSEFTISSVLCACA 180

Query: 181 AKCALSECQLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSS 240
           AKCALSECQLLHAF +KAAMDLNVFVATALL+VYAKCGLMK+A  VF SMP+RSVVTWSS
Sbjct: 181 AKCALSECQLLHAFVIKAAMDLNVFVATALLDVYAKCGLMKDAVSVFESMPDRSVVTWSS 240

Query: 241 MAAGYVQNEMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSG 300
           MAAGYVQNEMYEEALALFRKAWE GLK D+FLMSSVICACAGLAAMIEGKQVNALL KSG
Sbjct: 241 MAAGYVQNEMYEEALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSG 300

Query: 301 FCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFE 360
           FCSNIFVASSLIDMYAKCGGIEE+YKVF+DVE RNVVLWNAMISGLSRHA SLEVMILFE
Sbjct: 301 FCSNIFVASSLIDMYAKCGGIEESYKVFQDVERRNVVLWNAMISGLSRHARSLEVMILFE 360

Query: 361 KMQQMGLSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRA 420
           KMQQMGLSPN+VTFVSVLSACG MGLV+KGQKYFDLMIKEHHLAPNV+HYSCMVDTLSRA
Sbjct: 361 KMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMIKEHHLAPNVIHYSCMVDTLSRA 420

Query: 421 GQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLS 480
           GQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAE AAK LF +EPHN+GNY+LLS
Sbjct: 421 GQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEFAAKKLFDIEPHNSGNYLLLS 480

Query: 481 NMYAANGKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLN 540
           NMYAANGKWDEVAK RKLLKESDVKKE+GKSWIEIKDKVH FMVGE NHPKI EIYSKLN
Sbjct: 481 NMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLN 540

Query: 541 ELMEELQKLGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLR 600
           E+M+ELQKLGYK ETQHDLHQVGE++K ELL HHSEKLAF MGLLFLP +APIRIMKNLR
Sbjct: 541 EVMDELQKLGYKAETQHDLHQVGESIKQELLRHHSEKLAFIMGLLFLPPSAPIRIMKNLR 600

Query: 601 ICGDCHSFMKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           ICGDCHSFMK ASKFV R+VIVRDTNRFHHFKNGCCSCGDFW
Sbjct: 601 ICGDCHSFMKLASKFVCRDVIVRDTNRFHHFKNGCCSCGDFW 642

BLAST of CcUC08G152340 vs. NCBI nr
Match: XP_023550933.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1098.2 bits (2839), Expect = 0.0e+00
Identity = 552/634 (87.07%), Postives = 587/634 (92.59%), Query Frame = 0

Query: 1   MGFLHVCHFAANSGRYREKGKGIFQFLSLRVCATQFFASSSSCIVECEKAVTKDFYNTYV 60
           MGFLHVCHFA NSG+       IFQFLSLRVC  +FFA SSSCI+ECEK  T+DF  T+V
Sbjct: 1   MGFLHVCHFATNSGK-------IFQFLSLRVCINRFFA-SSSCIIECEKGTTEDFCRTHV 60

Query: 61  SYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDE 120
           SYVLE+LKLCAKRRLFLQGKACHA+ILLMGL+ +TLTSNILINMYSKCGSVD ARQVFDE
Sbjct: 61  SYVLELLKLCAKRRLFLQGKACHARILLMGLQAETLTSNILINMYSKCGSVDVARQVFDE 120

Query: 121 MPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAKCALSEC 180
           MPSRSLVSW+TMIGSLTQNGEENEALGLLLQMQREG+PFSEFTISSVLCA AAKCALSEC
Sbjct: 121 MPSRSLVSWSTMIGSLTQNGEENEALGLLLQMQREGTPFSEFTISSVLCACAAKCALSEC 180

Query: 181 QLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQN 240
           QLLHAFAVKAAM+LNVFVATALL+VYAKCGLM +AA VF SM ERSVVTWSSMAAGYVQN
Sbjct: 181 QLLHAFAVKAAMNLNVFVATALLDVYAKCGLMNDAANVFESMSERSVVTWSSMAAGYVQN 240

Query: 241 EMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVA 300
            MYEEALALFRKAWE GLK D+FLMSSVICACAGLAAMIEG QVNALL KSGFCSNIFVA
Sbjct: 241 AMYEEALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVA 300

Query: 301 SSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLS 360
           SSLIDMYAKCGGIEEAYKVFRDVE+RNVVLWNAMISGLSRHA SLEVMILFEKMQQ+GL+
Sbjct: 301 SSLIDMYAKCGGIEEAYKVFRDVEDRNVVLWNAMISGLSRHARSLEVMILFEKMQQIGLN 360

Query: 361 PNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYD 420
           PN+VTFVSVLSACG MGLVEKGQKYFDLMIKE+HLAPNV HYSCMVD LSRAG+T +AYD
Sbjct: 361 PNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHLAPNVYHYSCMVDALSRAGRTSDAYD 420

Query: 421 LISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGK 480
           LI KMPF ASASMWGSLLASCRTHGNLELAE+AAKNLF +EPHNAGNY+LLSNMYAANGK
Sbjct: 421 LICKMPFRASASMWGSLLASCRTHGNLELAEVAAKNLFDIEPHNAGNYLLLSNMYAANGK 480

Query: 481 WDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQK 540
           WDEVAKARKLLKESDVKKE+GKSWIEIK++VHSFMVGE NHPKI+EIYSKLNEL+EELQK
Sbjct: 481 WDEVAKARKLLKESDVKKERGKSWIEIKNEVHSFMVGERNHPKIAEIYSKLNELIEELQK 540

Query: 541 LGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSF 600
           LGY+ ETQHDLHQV E+ K ELL HHSEKLAFTMGLLFLP NAP+RIMKNLRICGDCHSF
Sbjct: 541 LGYQVETQHDLHQVEESRKQELLRHHSEKLAFTMGLLFLPPNAPLRIMKNLRICGDCHSF 600

Query: 601 MKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           MK  SK VRR+V+VRDTNRFHHF NG CSCGDFW
Sbjct: 601 MKLVSKLVRRDVVVRDTNRFHHFTNGHCSCGDFW 626

BLAST of CcUC08G152340 vs. NCBI nr
Match: XP_022992700.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X1 [Cucurbita maxima])

HSP 1 Score: 1095.9 bits (2833), Expect = 0.0e+00
Identity = 551/634 (86.91%), Postives = 587/634 (92.59%), Query Frame = 0

Query: 1   MGFLHVCHFAANSGRYREKGKGIFQFLSLRVCATQFFASSSSCIVECEKAVTKDFYNTYV 60
           MGFLHVCHFA NSG+       IFQFLSLRVC ++FFA SSSCI+ECEK  T+DF +T+V
Sbjct: 1   MGFLHVCHFATNSGK-------IFQFLSLRVCVSRFFA-SSSCIIECEKGTTEDFCSTHV 60

Query: 61  SYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDE 120
           SYVLE+LKLCAKRRLFLQGKACHA+ILLMGL+ +TLTSNILINMYSKCGSVD ARQVFDE
Sbjct: 61  SYVLELLKLCAKRRLFLQGKACHARILLMGLQAETLTSNILINMYSKCGSVDVARQVFDE 120

Query: 121 MPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAKCALSEC 180
           MPSRSLVSWNTMIGSLTQNGEENEAL LLLQMQR G+PFSEFTISSVLCA AAKCALSEC
Sbjct: 121 MPSRSLVSWNTMIGSLTQNGEENEALSLLLQMQRAGTPFSEFTISSVLCACAAKCALSEC 180

Query: 181 QLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQN 240
           QLLHAFA+KAAM+LNVFVATALL+VYAKCGLM +AA VF SM ERSVVTWSSMAAGYVQN
Sbjct: 181 QLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAAHVFESMSERSVVTWSSMAAGYVQN 240

Query: 241 EMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVA 300
            MYEEALALFRKAWE GLK D+FLMSSVICACAGLAAMIEG QVNALL KSGFCSNIFVA
Sbjct: 241 AMYEEALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVA 300

Query: 301 SSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLS 360
           SSLIDMYAKCGGIEEAYKVFRDVE RNVVLWNAMISGLSRHA SLEVMILFEKMQQ+GL+
Sbjct: 301 SSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMISGLSRHARSLEVMILFEKMQQIGLN 360

Query: 361 PNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYD 420
           PN+VTFVSVLSACG MGLVEKGQKYFDLMIKE+HLAPNV HYSCMVD LSRAG+T +AYD
Sbjct: 361 PNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHLAPNVFHYSCMVDALSRAGRTSDAYD 420

Query: 421 LISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGK 480
           LI KMPF ASASMWGSLLASCRTHGNLELAE+AAKNLF +EP NAGNY+LLSNMYAANGK
Sbjct: 421 LICKMPFRASASMWGSLLASCRTHGNLELAEVAAKNLFDIEPQNAGNYLLLSNMYAANGK 480

Query: 481 WDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQK 540
           WDEVAKARKLLKESDVKKE+GKSWIEIK++VHSFMVGE NHPKI+EIYSKLNEL+EELQK
Sbjct: 481 WDEVAKARKLLKESDVKKERGKSWIEIKNEVHSFMVGERNHPKIAEIYSKLNELIEELQK 540

Query: 541 LGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSF 600
           LGY+ ETQHDLHQVGE+ K ELL HHSEKLAFTMGLLFLP NAP+RIMKNLRICGDCHSF
Sbjct: 541 LGYQVETQHDLHQVGESRKQELLRHHSEKLAFTMGLLFLPPNAPLRIMKNLRICGDCHSF 600

Query: 601 MKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           MK ASK VRR+V+VRDTNRFHHF NG CSCGDFW
Sbjct: 601 MKLASKLVRRDVVVRDTNRFHHFTNGHCSCGDFW 626

BLAST of CcUC08G152340 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 701.4 bits (1809), Expect = 9.1e-201
Identity = 344/572 (60.14%), Postives = 439/572 (76.75%), Query Frame = 0

Query: 63  VLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDEMP 122
           V EIL+LCA+    ++ KACH +I+ + L+ D    N+LIN YSKCG V+ ARQVFD M 
Sbjct: 64  VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123

Query: 123 SRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAKCALSECQL 182
            RSLVSWNTMIG  T+N  E+EAL + L+M+ EG  FSEFTISSVL A    C   EC+ 
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183

Query: 183 LHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQNEM 242
           LH  +VK  +DLN++V TALL++YAKCG++K+A  VF SM ++S VTWSSM AGYVQN+ 
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243

Query: 243 YEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVASS 302
           YEEAL L+R+A  + L+Q++F +SSVICAC+ LAA+IEGKQ++A++ KSGF SN+FVASS
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303

Query: 303 LIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLSPN 362
            +DMYAKCG + E+Y +F +V+E+N+ LWN +ISG ++HA   EVMILFEKMQQ G+ PN
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363

Query: 363 NVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYDLI 422
            VTF S+LS CG  GLVE+G+++F LM   + L+PNV+HYSCMVD L RAG   EAY+LI
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 423

Query: 423 SKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGKWD 482
             +PF+ +AS+WGSLLASCR + NLELAE+AA+ LF +EP NAGN+VLLSN+YAAN +W+
Sbjct: 424 KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWE 483

Query: 483 EVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQKLG 542
           E+AK+RKLL++ DVKK +GKSWI+IKDKVH+F VGE  HP+I EI S L+ L+ + +K G
Sbjct: 484 EIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 543

Query: 543 YKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSFMK 602
           YK   +H+LH V    K ELL  HSEKLA   GL+ LP ++P+RIMKNLRIC DCH FMK
Sbjct: 544 YKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMK 603

Query: 603 FASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
            AS   RR +IVRD NRFHHF +G CSCGDFW
Sbjct: 604 AASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635

BLAST of CcUC08G152340 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 1.8e-127
Identity = 236/580 (40.69%), Postives = 362/580 (62.41%), Query Frame = 0

Query: 55  FYNTYVSYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFA 114
           FYNT       +LK C   +L +QG+  HA IL    + D +  N L+NMY+KCGS++ A
Sbjct: 62  FYNT-------LLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEA 121

Query: 115 RQVFDEMPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAK 174
           R+VF++MP R  V+W T+I   +Q+    +AL    QM R G   +EFT+SSV+ A AA+
Sbjct: 122 RKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAE 181

Query: 175 CALSECQLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMA 234
                   LH F VK   D NV V +ALL++Y + GLM +A  VF ++  R+ V+W+++ 
Sbjct: 182 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 241

Query: 235 AGYVQNEMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFC 294
           AG+ +    E+AL LF+     G +   F  +S+  AC+    + +GK V+A + KSG  
Sbjct: 242 AGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 301

Query: 295 SNIFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKM 354
              F  ++L+DMYAK G I +A K+F  + +R+VV WN++++  ++H    E +  FE+M
Sbjct: 302 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 361

Query: 355 QQMGLSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQ 414
           +++G+ PN ++F+SVL+AC   GL+++G  Y++LM K+  + P   HY  +VD L RAG 
Sbjct: 362 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELM-KKDGIVPEAWHYVTVVDLLGRAGD 421

Query: 415 TFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNM 474
              A   I +MP   +A++W +LL +CR H N EL   AA+++F ++P + G +V+L N+
Sbjct: 422 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 481

Query: 475 YAANGKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNEL 534
           YA+ G+W++ A+ RK +KES VKKE   SW+EI++ +H F+  +  HP+  EI  K  E+
Sbjct: 482 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEV 541

Query: 535 MEELQKLGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRIC 594
           + ++++LGY  +T H +  V +  +   L +HSEK+A    LL  P  + I I KN+R+C
Sbjct: 542 LAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVC 601

Query: 595 GDCHSFMKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           GDCH+ +K ASK V R +IVRDTNRFHHFK+G CSC D+W
Sbjct: 602 GDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633

BLAST of CcUC08G152340 vs. ExPASy Swiss-Prot
Match: Q9LTF4 (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H52 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 5.1e-127
Identity = 238/574 (41.46%), Postives = 360/574 (62.72%), Query Frame = 0

Query: 63  VLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDEMP 122
           + ++L   A+ R  ++G   H  ++  GL    L +N LIN YSK      +R+ F++ P
Sbjct: 18  ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77

Query: 123 SRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVL--CAYAAKCALSEC 182
            +S  +W+++I    QN     +L  L +M        +  + S    CA  ++C +   
Sbjct: 78  QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIG-- 137

Query: 183 QLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQN 242
           + +H  ++K   D +VFV ++L+++YAKCG +  A  +F  MP+R+VVTWS M  GY Q 
Sbjct: 138 RSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQM 197

Query: 243 EMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVA 302
              EEAL LF++A    L  +++  SSVI  CA    +  G+Q++ L  KS F S+ FV 
Sbjct: 198 GENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 257

Query: 303 SSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLS 362
           SSL+ +Y+KCG  E AY+VF +V  +N+ +WNAM+   ++H+ + +V+ LF++M+  G+ 
Sbjct: 258 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 317

Query: 363 PNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYD 422
           PN +TF++VL+AC   GLV++G+ YFD M KE  + P   HY+ +VD L RAG+  EA +
Sbjct: 318 PNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALE 377

Query: 423 LISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGK 482
           +I+ MP + + S+WG+LL SC  H N ELA  AA  +F + P ++G ++ LSN YAA+G+
Sbjct: 378 VITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGR 437

Query: 483 WDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQK 542
           +++ AKARKLL++   KKE G SW+E ++KVH+F  GE  H K  EIY KL EL EE++K
Sbjct: 438 FEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEK 497

Query: 543 LGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSF 602
            GY  +T + L +V    K + + +HSE+LA   GL+  P + PIR+MKNLR+CGDCH+ 
Sbjct: 498 AGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNA 557

Query: 603 MKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           +KF S   RR +IVRD NRFH F++G CSC D+W
Sbjct: 558 IKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588

BLAST of CcUC08G152340 vs. ExPASy Swiss-Prot
Match: Q9ZUW3 (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 3.1e-124
Identity = 238/590 (40.34%), Postives = 363/590 (61.53%), Query Frame = 0

Query: 55  FYNTYVSYV-------LEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSK 114
           FY+  ++YV         ++KLCA  +     +  H  ++  G   D      L+  YSK
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342

Query: 115 CGSVDFARQVFDEMPS-RSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISS 174
           C ++  A ++F E+    ++VSW  MI    QN  + EA+ L  +M+R+G   +EFT S 
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402

Query: 175 VLCAYAAKCALSECQLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERS 234
           +L A      +S  + +HA  VK   + +  V TALL+ Y K G ++ AA VF  + ++ 
Sbjct: 403 ILTALP---VISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 462

Query: 235 VVTWSSMAAGYVQNEMYEEALALFRKAWEIGLKQDEFLMSSVICACAGL-AAMIEGKQVN 294
           +V WS+M AGY Q    E A+ +F +  + G+K +EF  SS++  CA   A+M +GKQ +
Sbjct: 463 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 522

Query: 295 ALLFKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSL 354
               KS   S++ V+S+L+ MYAK G IE A +VF+   E+++V WN+MISG ++H  ++
Sbjct: 523 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 582

Query: 355 EVMILFEKMQQMGLSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCM 414
           + + +F++M++  +  + VTF+ V +AC   GLVE+G+KYFD+M+++  +AP   H SCM
Sbjct: 583 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 642

Query: 415 VDTLSRAGQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNA 474
           VD  SRAGQ  +A  +I  MP  A +++W ++LA+CR H   EL  +AA+ +  M+P ++
Sbjct: 643 VDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDS 702

Query: 475 GNYVLLSNMYAANGKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKIS 534
             YVLLSNMYA +G W E AK RKL+ E +VKKE G SWIE+K+K +SF+ G+ +HP   
Sbjct: 703 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKD 762

Query: 535 EIYSKLNELMEELQKLGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPI 594
           +IY KL +L   L+ LGY+ +T + L  + +  K  +L  HSE+LA   GL+  P  +P+
Sbjct: 763 QIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPL 822

Query: 595 RIMKNLRICGDCHSFMKFASKFVRRNVIVRDTNRFHHF-KNGCCSCGDFW 635
            I+KNLR+CGDCH  +K  +K   R ++VRD+NRFHHF  +G CSCGDFW
Sbjct: 823 LIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868

BLAST of CcUC08G152340 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 9.0e-124
Identity = 243/636 (38.21%), Postives = 358/636 (56.29%), Query Frame = 0

Query: 66  ILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKC----------------- 125
           +L   A  R    GK  H+ I+ +GL+ +   SN L+NMY+KC                 
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211

Query: 126 --------------GSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQR 185
                         G +D A   F++M  R +V+WN+MI    Q G +  AL +  +M R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271

Query: 186 EG--SPFSEFTISSVLCAYAAKCALSECQLLHAFAVKAAMDLNVFVATALLNVYAKC--- 245
           +   SP   FT++SVL A A    L   + +H+  V    D++  V  AL+++Y++C   
Sbjct: 272 DSLLSP-DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 331

Query: 246 ------------------------------GLMKNAAGVFYSMPERSVVTWSSMAAGYVQ 305
                                         G M  A  +F S+ +R VV W++M  GY Q
Sbjct: 332 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 391

Query: 306 NEMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFV 365
           +  Y EA+ LFR     G + + + +++++   + LA++  GKQ++    KSG   ++ V
Sbjct: 392 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 451

Query: 366 ASSLIDMYAKCGGIEEAYKVFRDVE-ERNVVLWNAMISGLSRHACSLEVMILFEKMQQMG 425
           +++LI MYAK G I  A + F  +  ER+ V W +MI  L++H  + E + LFE M   G
Sbjct: 452 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 511

Query: 426 LSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEA 485
           L P+++T+V V SAC   GLV +G++YFD+M     + P + HY+CMVD   RAG   EA
Sbjct: 512 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 571

Query: 486 YDLISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAAN 545
            + I KMP       WGSLL++CR H N++L ++AA+ L ++EP N+G Y  L+N+Y+A 
Sbjct: 572 QEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 631

Query: 546 GKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEEL 605
           GKW+E AK RK +K+  VKKE+G SWIE+K KVH F V +  HP+ +EIY  + ++ +E+
Sbjct: 632 GKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEI 691

Query: 606 QKLGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCH 635
           +K+GY  +T   LH + E VK ++L HHSEKLA   GL+  P    +RIMKNLR+C DCH
Sbjct: 692 KKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCH 751

BLAST of CcUC08G152340 vs. ExPASy TrEMBL
Match: A0A1S3C4B6 (pentatricopeptide repeat-containing protein At5g04780 OS=Cucumis melo OX=3656 GN=LOC103496519 PE=3 SV=1)

HSP 1 Score: 1141.7 bits (2952), Expect = 0.0e+00
Identity = 573/642 (89.25%), Postives = 600/642 (93.46%), Query Frame = 0

Query: 1   MGFLHVCHFAANSGRYRE------KGKGIFQFLSLRVCATQFFASS--SSCIVECEKAVT 60
           MGFLHVCHFA+NSGRYRE      KGKGIFQFLSLR+C TQFFASS  SSCIVECEK  +
Sbjct: 1   MGFLHVCHFASNSGRYREKGKGKGKGKGIFQFLSLRLCTTQFFASSSPSSCIVECEKPTS 60

Query: 61  KDFYNTYVSYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVD 120
           KDF  T+VSYV EILKLCAKR+LFLQGKACHAQILLMGLKTD LTSNILIN YSKCGSVD
Sbjct: 61  KDFNATHVSYVHEILKLCAKRKLFLQGKACHAQILLMGLKTDLLTSNILINTYSKCGSVD 120

Query: 121 FARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYA 180
            ARQVFDEMPSRSLVSWNTMIGSLTQNG+ENEALGLLLQMQREG+PFSEFTISSVLCA A
Sbjct: 121 SARQVFDEMPSRSLVSWNTMIGSLTQNGQENEALGLLLQMQREGTPFSEFTISSVLCACA 180

Query: 181 AKCALSECQLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSS 240
           AKCALSECQLLHAF +KAAMDLNVFVATALL+VYAKCGLMK+A  VF SMP+RSVVTWSS
Sbjct: 181 AKCALSECQLLHAFVIKAAMDLNVFVATALLDVYAKCGLMKDAVSVFESMPDRSVVTWSS 240

Query: 241 MAAGYVQNEMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSG 300
           MAAGYVQNEMYEEALALFRKAWE GLK D+FLMSSVICACAGLAAMIEGKQVNALL KSG
Sbjct: 241 MAAGYVQNEMYEEALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSG 300

Query: 301 FCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFE 360
           FCSNIFVASSLIDMYAKCGGIEE+YKVF+DVE RNVVLWNAMISGLSRHA SLEVMILFE
Sbjct: 301 FCSNIFVASSLIDMYAKCGGIEESYKVFQDVERRNVVLWNAMISGLSRHARSLEVMILFE 360

Query: 361 KMQQMGLSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRA 420
           KMQQMGLSPN+VTFVSVLSACG MGLV+KGQKYFDLMIKEHHLAPNV+HYSCMVDTLSRA
Sbjct: 361 KMQQMGLSPNDVTFVSVLSACGHMGLVKKGQKYFDLMIKEHHLAPNVIHYSCMVDTLSRA 420

Query: 421 GQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLS 480
           GQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAE AAK LF +EPHN+GNY+LLS
Sbjct: 421 GQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEFAAKKLFDIEPHNSGNYLLLS 480

Query: 481 NMYAANGKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLN 540
           NMYAANGKWDEVAK RKLLKESDVKKE+GKSWIEIKDKVH FMVGE NHPKI EIYSKLN
Sbjct: 481 NMYAANGKWDEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLN 540

Query: 541 ELMEELQKLGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLR 600
           E+M+ELQKLGYK ETQHDLHQVGE++K ELL HHSEKLAF MGLLFLP +APIRIMKNLR
Sbjct: 541 EVMDELQKLGYKAETQHDLHQVGESIKQELLRHHSEKLAFIMGLLFLPPSAPIRIMKNLR 600

Query: 601 ICGDCHSFMKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           ICGDCHSFMK ASKFV R+VIVRDTNRFHHFKNGCCSCGDFW
Sbjct: 601 ICGDCHSFMKLASKFVCRDVIVRDTNRFHHFKNGCCSCGDFW 642

BLAST of CcUC08G152340 vs. ExPASy TrEMBL
Match: A0A6J1JWF9 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488964 PE=3 SV=1)

HSP 1 Score: 1095.9 bits (2833), Expect = 0.0e+00
Identity = 551/634 (86.91%), Postives = 587/634 (92.59%), Query Frame = 0

Query: 1   MGFLHVCHFAANSGRYREKGKGIFQFLSLRVCATQFFASSSSCIVECEKAVTKDFYNTYV 60
           MGFLHVCHFA NSG+       IFQFLSLRVC ++FFA SSSCI+ECEK  T+DF +T+V
Sbjct: 1   MGFLHVCHFATNSGK-------IFQFLSLRVCVSRFFA-SSSCIIECEKGTTEDFCSTHV 60

Query: 61  SYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDE 120
           SYVLE+LKLCAKRRLFLQGKACHA+ILLMGL+ +TLTSNILINMYSKCGSVD ARQVFDE
Sbjct: 61  SYVLELLKLCAKRRLFLQGKACHARILLMGLQAETLTSNILINMYSKCGSVDVARQVFDE 120

Query: 121 MPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAKCALSEC 180
           MPSRSLVSWNTMIGSLTQNGEENEAL LLLQMQR G+PFSEFTISSVLCA AAKCALSEC
Sbjct: 121 MPSRSLVSWNTMIGSLTQNGEENEALSLLLQMQRAGTPFSEFTISSVLCACAAKCALSEC 180

Query: 181 QLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQN 240
           QLLHAFA+KAAM+LNVFVATALL+VYAKCGLM +AA VF SM ERSVVTWSSMAAGYVQN
Sbjct: 181 QLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAAHVFESMSERSVVTWSSMAAGYVQN 240

Query: 241 EMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVA 300
            MYEEALALFRKAWE GLK D+FLMSSVICACAGLAAMIEG QVNALL KSGFCSNIFVA
Sbjct: 241 AMYEEALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVA 300

Query: 301 SSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLS 360
           SSLIDMYAKCGGIEEAYKVFRDVE RNVVLWNAMISGLSRHA SLEVMILFEKMQQ+GL+
Sbjct: 301 SSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMISGLSRHARSLEVMILFEKMQQIGLN 360

Query: 361 PNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYD 420
           PN+VTFVSVLSACG MGLVEKGQKYFDLMIKE+HLAPNV HYSCMVD LSRAG+T +AYD
Sbjct: 361 PNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHLAPNVFHYSCMVDALSRAGRTSDAYD 420

Query: 421 LISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGK 480
           LI KMPF ASASMWGSLLASCRTHGNLELAE+AAKNLF +EP NAGNY+LLSNMYAANGK
Sbjct: 421 LICKMPFRASASMWGSLLASCRTHGNLELAEVAAKNLFDIEPQNAGNYLLLSNMYAANGK 480

Query: 481 WDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQK 540
           WDEVAKARKLLKESDVKKE+GKSWIEIK++VHSFMVGE NHPKI+EIYSKLNEL+EELQK
Sbjct: 481 WDEVAKARKLLKESDVKKERGKSWIEIKNEVHSFMVGERNHPKIAEIYSKLNELIEELQK 540

Query: 541 LGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSF 600
           LGY+ ETQHDLHQVGE+ K ELL HHSEKLAFTMGLLFLP NAP+RIMKNLRICGDCHSF
Sbjct: 541 LGYQVETQHDLHQVGESRKQELLRHHSEKLAFTMGLLFLPPNAPLRIMKNLRICGDCHSF 600

Query: 601 MKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           MK ASK VRR+V+VRDTNRFHHF NG CSCGDFW
Sbjct: 601 MKLASKLVRRDVVVRDTNRFHHFTNGHCSCGDFW 626

BLAST of CcUC08G152340 vs. ExPASy TrEMBL
Match: A0A6J1FDG7 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444755 PE=3 SV=1)

HSP 1 Score: 1087.0 bits (2810), Expect = 0.0e+00
Identity = 547/634 (86.28%), Postives = 585/634 (92.27%), Query Frame = 0

Query: 1   MGFLHVCHFAANSGRYREKGKGIFQFLSLRVCATQFFASSSSCIVECEKAVTKDFYNTYV 60
           MGFLHVCHFA NSG+       IFQFLSLRVC ++FFA SSSCI+ECEK  T+DF +T+V
Sbjct: 1   MGFLHVCHFATNSGK-------IFQFLSLRVCISRFFA-SSSCIIECEKGTTEDFCSTHV 60

Query: 61  SYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDE 120
           SYVLE+LKLCAKRRLFLQGKACHA+ILLMGL+ +T TSNILINMY+KCGSVD ARQVFDE
Sbjct: 61  SYVLELLKLCAKRRLFLQGKACHARILLMGLQAETSTSNILINMYAKCGSVDVARQVFDE 120

Query: 121 MPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAKCALSEC 180
           MPSRSLVSW+TMIGSLTQNGEENEALGL LQMQREG+PFSEFTISSVLCA AAKCALSEC
Sbjct: 121 MPSRSLVSWSTMIGSLTQNGEENEALGLFLQMQREGTPFSEFTISSVLCACAAKCALSEC 180

Query: 181 QLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQN 240
           QLLHAFAVKAAM+LNVFVATALL+VYAKCGLM +AA VF SM ERSVVTWSSMAAGYVQN
Sbjct: 181 QLLHAFAVKAAMNLNVFVATALLDVYAKCGLMNDAANVFESMSERSVVTWSSMAAGYVQN 240

Query: 241 EMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVA 300
            MYEEALALFRKAWE GLK D+FLMSSVICACAGLAAMIEG QVNALL KSGFCSNIFVA
Sbjct: 241 AMYEEALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVA 300

Query: 301 SSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLS 360
           SSLIDMYAKCGGIEEAYKVFRDVE RNVVLWNAMISGLSRHA SLEVMILFEKMQQ+GL+
Sbjct: 301 SSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMISGLSRHARSLEVMILFEKMQQIGLN 360

Query: 361 PNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYD 420
           PN+VTFVSVLSACG MGLVEKGQKYFDLMIKE+HLAPNV HYSCMVD LSRAG+T +AY 
Sbjct: 361 PNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHLAPNVFHYSCMVDALSRAGRTSDAYV 420

Query: 421 LISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGK 480
           LI KMPF ASAS+WGSLLASCRTHGNLELAE+AAKNLF +EPHNAGNY+LLSNMYAANGK
Sbjct: 421 LICKMPFRASASIWGSLLASCRTHGNLELAEVAAKNLFDIEPHNAGNYLLLSNMYAANGK 480

Query: 481 WDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQK 540
           WDEVAKARKLLKESDVKKE+GKSWIEIK++VH FMVGE NHPKI+EIYSKLNEL+EELQK
Sbjct: 481 WDEVAKARKLLKESDVKKERGKSWIEIKNEVHLFMVGERNHPKIAEIYSKLNELIEELQK 540

Query: 541 LGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSF 600
           LGY+ ETQHDLHQV E+ K ELL HHSEKLAFTMGLLFLP NAP+RIMKNLRICGDCHSF
Sbjct: 541 LGYQVETQHDLHQVEESRKQELLRHHSEKLAFTMGLLFLPPNAPLRIMKNLRICGDCHSF 600

Query: 601 MKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           MK ASK VRR+V+VRDTNRFHHF NG CSCGDFW
Sbjct: 601 MKLASKLVRRDVVVRDTNRFHHFTNGHCSCGDFW 626

BLAST of CcUC08G152340 vs. ExPASy TrEMBL
Match: A0A6J1BZB9 (pentatricopeptide repeat-containing protein At5g04780 OS=Momordica charantia OX=3673 GN=LOC111006613 PE=3 SV=1)

HSP 1 Score: 1057.0 bits (2732), Expect = 3.1e-305
Identity = 533/634 (84.07%), Postives = 579/634 (91.32%), Query Frame = 0

Query: 1   MGFLHVCHFAANSGRYREKGKGIFQFLSLRVCATQFFASSSSCIVECEKAVTKDFYNTYV 60
           MGFLHV +FAANSGR RE+   +   + LR C    F+++SS IVE  K  ++DFY T+ 
Sbjct: 1   MGFLHVRNFAANSGRNRERRLFLLLRVRLRTCQ---FSAASSFIVESGKGTSEDFYATHF 60

Query: 61  SYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDE 120
           SYV E+LKLCA+RRL +QGKACHAQILLMGL+ DT TSNILINMYSKCG VDFAR+VFDE
Sbjct: 61  SYVHELLKLCAERRLPIQGKACHAQILLMGLQKDTSTSNILINMYSKCGLVDFARKVFDE 120

Query: 121 MPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAKCALSEC 180
           MP+R+LVSW+TMIGSLTQNGEEN+ALGLL+QM+REG PFSEFTISSVLCA AAKCAL EC
Sbjct: 121 MPNRNLVSWSTMIGSLTQNGEENQALGLLVQMKREGIPFSEFTISSVLCACAAKCALYEC 180

Query: 181 QLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQN 240
           QLLHAFA+KAAM+LNVFVATALL+VYAKCGLM +AA VF SMPERS VTWSSMAAGYVQN
Sbjct: 181 QLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAARVFESMPERSAVTWSSMAAGYVQN 240

Query: 241 EMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVA 300
           E+YEEALALFRKA  IGL+QD+F MSS++CACA LAAMIEG QVNALL KSGFCSNIFVA
Sbjct: 241 ELYEEALALFRKAQGIGLRQDQFFMSSLVCACARLAAMIEGNQVNALLSKSGFCSNIFVA 300

Query: 301 SSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLS 360
           SSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHA SLEVMILFEKMQQMGLS
Sbjct: 301 SSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLS 360

Query: 361 PNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYD 420
           PN+VTFVSVLSACG MGLVEKGQKYFDLMIKEHHL+PNVLHYSCMVDTLSRAGQTF+AYD
Sbjct: 361 PNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEHHLSPNVLHYSCMVDTLSRAGQTFKAYD 420

Query: 421 LISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGK 480
           L+S M FNA+ASMWGSLLASCRTHGNLELAE+AA+NLF +EPHNAGNY+LLSNMYAA+GK
Sbjct: 421 LMSNMAFNATASMWGSLLASCRTHGNLELAEVAARNLFEIEPHNAGNYLLLSNMYAAHGK 480

Query: 481 WDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQK 540
           WDEVAKARKLLKESDVKKE+GKSWIEIKDKVHSFMVGE NHPKISEIYSKLNEL+EELQK
Sbjct: 481 WDEVAKARKLLKESDVKKERGKSWIEIKDKVHSFMVGERNHPKISEIYSKLNELIEELQK 540

Query: 541 LGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSF 600
           LGYK ET+HDLHQVGE+ K  LL HHSEKLA TMGLLFL  NAPIRIMKNLRICGDCHSF
Sbjct: 541 LGYKAETEHDLHQVGESRKQVLLRHHSEKLALTMGLLFLSPNAPIRIMKNLRICGDCHSF 600

Query: 601 MKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           MK AS+FVRR+VIVRDTNRFHHFKNG CSCGDFW
Sbjct: 601 MKLASRFVRRDVIVRDTNRFHHFKNGSCSCGDFW 631

BLAST of CcUC08G152340 vs. ExPASy TrEMBL
Match: A0A6J1JQM7 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488964 PE=3 SV=1)

HSP 1 Score: 1025.8 bits (2651), Expect = 7.8e-296
Identity = 522/634 (82.33%), Postives = 557/634 (87.85%), Query Frame = 0

Query: 1   MGFLHVCHFAANSGRYREKGKGIFQFLSLRVCATQFFASSSSCIVECEKAVTKDFYNTYV 60
           MGFLHVCHFA NSG+       IFQFLSLRVC ++FFA SSSCI+ECEK  T+DF +T+V
Sbjct: 1   MGFLHVCHFATNSGK-------IFQFLSLRVCVSRFFA-SSSCIIECEKGTTEDFCSTHV 60

Query: 61  SYVLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDE 120
           SYVLE+LKLCAKRRLFLQGKACHA+ILLMGL+ +TLTSNILINMYSKCGSVD ARQVFDE
Sbjct: 61  SYVLELLKLCAKRRLFLQGKACHARILLMGLQAETLTSNILINMYSKCGSVDVARQVFDE 120

Query: 121 MPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAKCALSEC 180
           MPSRSLVSWNTMIGSLTQN                                 AKCALSEC
Sbjct: 121 MPSRSLVSWNTMIGSLTQN---------------------------------AKCALSEC 180

Query: 181 QLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQN 240
           QLLHAFA+KAAM+LNVFVATALL+VYAKCGLM +AA VF SM ERSVVTWSSMAAGYVQN
Sbjct: 181 QLLHAFAIKAAMNLNVFVATALLDVYAKCGLMNDAAHVFESMSERSVVTWSSMAAGYVQN 240

Query: 241 EMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVA 300
            MYEEALALFRKAWE GLK D+FLMSSVICACAGLAAMIEG QVNALL KSGFCSNIFVA
Sbjct: 241 AMYEEALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGNQVNALLSKSGFCSNIFVA 300

Query: 301 SSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLS 360
           SSLIDMYAKCGGIEEAYKVFRDVE RNVVLWNAMISGLSRHA SLEVMILFEKMQQ+GL+
Sbjct: 301 SSLIDMYAKCGGIEEAYKVFRDVEYRNVVLWNAMISGLSRHARSLEVMILFEKMQQIGLN 360

Query: 361 PNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYD 420
           PN+VTFVSVLSACG MGLVEKGQKYFDLMIKE+HLAPNV HYSCMVD LSRAG+T +AYD
Sbjct: 361 PNDVTFVSVLSACGHMGLVEKGQKYFDLMIKEYHLAPNVFHYSCMVDALSRAGRTSDAYD 420

Query: 421 LISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGK 480
           LI KMPF ASASMWGSLLASCRTHGNLELAE+AAKNLF +EP NAGNY+LLSNMYAANGK
Sbjct: 421 LICKMPFRASASMWGSLLASCRTHGNLELAEVAAKNLFDIEPQNAGNYLLLSNMYAANGK 480

Query: 481 WDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQK 540
           WDEVAKARKLLKESDVKKE+GKSWIEIK++VHSFMVGE NHPKI+EIYSKLNEL+EELQK
Sbjct: 481 WDEVAKARKLLKESDVKKERGKSWIEIKNEVHSFMVGERNHPKIAEIYSKLNELIEELQK 540

Query: 541 LGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSF 600
           LGY+ ETQHDLHQVGE+ K ELL HHSEKLAFTMGLLFLP NAP+RIMKNLRICGDCHSF
Sbjct: 541 LGYQVETQHDLHQVGESRKQELLRHHSEKLAFTMGLLFLPPNAPLRIMKNLRICGDCHSF 593

Query: 601 MKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           MK ASK VRR+V+VRDTNRFHHF NG CSCGDFW
Sbjct: 601 MKLASKLVRRDVVVRDTNRFHHFTNGHCSCGDFW 593

BLAST of CcUC08G152340 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 701.4 bits (1809), Expect = 6.5e-202
Identity = 344/572 (60.14%), Postives = 439/572 (76.75%), Query Frame = 0

Query: 63  VLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDEMP 122
           V EIL+LCA+    ++ KACH +I+ + L+ D    N+LIN YSKCG V+ ARQVFD M 
Sbjct: 64  VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123

Query: 123 SRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVLCAYAAKCALSECQL 182
            RSLVSWNTMIG  T+N  E+EAL + L+M+ EG  FSEFTISSVL A    C   EC+ 
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183

Query: 183 LHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQNEM 242
           LH  +VK  +DLN++V TALL++YAKCG++K+A  VF SM ++S VTWSSM AGYVQN+ 
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243

Query: 243 YEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVASS 302
           YEEAL L+R+A  + L+Q++F +SSVICAC+ LAA+IEGKQ++A++ KSGF SN+FVASS
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303

Query: 303 LIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLSPN 362
            +DMYAKCG + E+Y +F +V+E+N+ LWN +ISG ++HA   EVMILFEKMQQ G+ PN
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPN 363

Query: 363 NVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYDLI 422
            VTF S+LS CG  GLVE+G+++F LM   + L+PNV+HYSCMVD L RAG   EAY+LI
Sbjct: 364 EVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELI 423

Query: 423 SKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGKWD 482
             +PF+ +AS+WGSLLASCR + NLELAE+AA+ LF +EP NAGN+VLLSN+YAAN +W+
Sbjct: 424 KSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWE 483

Query: 483 EVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQKLG 542
           E+AK+RKLL++ DVKK +GKSWI+IKDKVH+F VGE  HP+I EI S L+ L+ + +K G
Sbjct: 484 EIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFG 543

Query: 543 YKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSFMK 602
           YK   +H+LH V    K ELL  HSEKLA   GL+ LP ++P+RIMKNLRIC DCH FMK
Sbjct: 544 YKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMK 603

Query: 603 FASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
            AS   RR +IVRD NRFHHF +G CSCGDFW
Sbjct: 604 AASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635

BLAST of CcUC08G152340 vs. TAIR 10
Match: AT5G52630.1 (mitochondrial RNAediting factor 1 )

HSP 1 Score: 456.4 bits (1173), Expect = 3.6e-128
Identity = 238/574 (41.46%), Postives = 360/574 (62.72%), Query Frame = 0

Query: 63  VLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDEMP 122
           + ++L   A+ R  ++G   H  ++  GL    L +N LIN YSK      +R+ F++ P
Sbjct: 18  ICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSP 77

Query: 123 SRSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISSVL--CAYAAKCALSEC 182
            +S  +W+++I    QN     +L  L +M        +  + S    CA  ++C +   
Sbjct: 78  QKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIG-- 137

Query: 183 QLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERSVVTWSSMAAGYVQN 242
           + +H  ++K   D +VFV ++L+++YAKCG +  A  +F  MP+R+VVTWS M  GY Q 
Sbjct: 138 RSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQM 197

Query: 243 EMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFVA 302
              EEAL LF++A    L  +++  SSVI  CA    +  G+Q++ L  KS F S+ FV 
Sbjct: 198 GENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 257

Query: 303 SSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSLEVMILFEKMQQMGLS 362
           SSL+ +Y+KCG  E AY+VF +V  +N+ +WNAM+   ++H+ + +V+ LF++M+  G+ 
Sbjct: 258 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 317

Query: 363 PNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEAYD 422
           PN +TF++VL+AC   GLV++G+ YFD M KE  + P   HY+ +VD L RAG+  EA +
Sbjct: 318 PNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALE 377

Query: 423 LISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAANGK 482
           +I+ MP + + S+WG+LL SC  H N ELA  AA  +F + P ++G ++ LSN YAA+G+
Sbjct: 378 VITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGR 437

Query: 483 WDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEELQK 542
           +++ AKARKLL++   KKE G SW+E ++KVH+F  GE  H K  EIY KL EL EE++K
Sbjct: 438 FEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEK 497

Query: 543 LGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCHSF 602
            GY  +T + L +V    K + + +HSE+LA   GL+  P + PIR+MKNLR+CGDCH+ 
Sbjct: 498 AGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNA 557

Query: 603 MKFASKFVRRNVIVRDTNRFHHFKNGCCSCGDFW 635
           +KF S   RR +IVRD NRFH F++G CSC D+W
Sbjct: 558 IKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588

BLAST of CcUC08G152340 vs. TAIR 10
Match: AT2G27610.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 447.2 bits (1149), Expect = 2.2e-125
Identity = 238/590 (40.34%), Postives = 363/590 (61.53%), Query Frame = 0

Query: 55  FYNTYVSYV-------LEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSK 114
           FY+  ++YV         ++KLCA  +     +  H  ++  G   D      L+  YSK
Sbjct: 283 FYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSK 342

Query: 115 CGSVDFARQVFDEMPS-RSLVSWNTMIGSLTQNGEENEALGLLLQMQREGSPFSEFTISS 174
           C ++  A ++F E+    ++VSW  MI    QN  + EA+ L  +M+R+G   +EFT S 
Sbjct: 343 CTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSV 402

Query: 175 VLCAYAAKCALSECQLLHAFAVKAAMDLNVFVATALLNVYAKCGLMKNAAGVFYSMPERS 234
           +L A      +S  + +HA  VK   + +  V TALL+ Y K G ++ AA VF  + ++ 
Sbjct: 403 ILTALP---VISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKD 462

Query: 235 VVTWSSMAAGYVQNEMYEEALALFRKAWEIGLKQDEFLMSSVICACAGL-AAMIEGKQVN 294
           +V WS+M AGY Q    E A+ +F +  + G+K +EF  SS++  CA   A+M +GKQ +
Sbjct: 463 IVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH 522

Query: 295 ALLFKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWNAMISGLSRHACSL 354
               KS   S++ V+S+L+ MYAK G IE A +VF+   E+++V WN+MISG ++H  ++
Sbjct: 523 GFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAM 582

Query: 355 EVMILFEKMQQMGLSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCM 414
           + + +F++M++  +  + VTF+ V +AC   GLVE+G+KYFD+M+++  +AP   H SCM
Sbjct: 583 KALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCM 642

Query: 415 VDTLSRAGQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNA 474
           VD  SRAGQ  +A  +I  MP  A +++W ++LA+CR H   EL  +AA+ +  M+P ++
Sbjct: 643 VDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDS 702

Query: 475 GNYVLLSNMYAANGKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKIS 534
             YVLLSNMYA +G W E AK RKL+ E +VKKE G SWIE+K+K +SF+ G+ +HP   
Sbjct: 703 AAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKD 762

Query: 535 EIYSKLNELMEELQKLGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPI 594
           +IY KL +L   L+ LGY+ +T + L  + +  K  +L  HSE+LA   GL+  P  +P+
Sbjct: 763 QIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPL 822

Query: 595 RIMKNLRICGDCHSFMKFASKFVRRNVIVRDTNRFHHF-KNGCCSCGDFW 635
            I+KNLR+CGDCH  +K  +K   R ++VRD+NRFHHF  +G CSCGDFW
Sbjct: 823 LIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868

BLAST of CcUC08G152340 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 445.7 bits (1145), Expect = 6.4e-125
Identity = 243/636 (38.21%), Postives = 358/636 (56.29%), Query Frame = 0

Query: 66  ILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKC----------------- 125
           +L   A  R    GK  H+ I+ +GL+ +   SN L+NMY+KC                 
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211

Query: 126 --------------GSVDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALGLLLQMQR 185
                         G +D A   F++M  R +V+WN+MI    Q G +  AL +  +M R
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271

Query: 186 EG--SPFSEFTISSVLCAYAAKCALSECQLLHAFAVKAAMDLNVFVATALLNVYAKC--- 245
           +   SP   FT++SVL A A    L   + +H+  V    D++  V  AL+++Y++C   
Sbjct: 272 DSLLSP-DRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 331

Query: 246 ------------------------------GLMKNAAGVFYSMPERSVVTWSSMAAGYVQ 305
                                         G M  A  +F S+ +R VV W++M  GY Q
Sbjct: 332 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 391

Query: 306 NEMYEEALALFRKAWEIGLKQDEFLMSSVICACAGLAAMIEGKQVNALLFKSGFCSNIFV 365
           +  Y EA+ LFR     G + + + +++++   + LA++  GKQ++    KSG   ++ V
Sbjct: 392 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 451

Query: 366 ASSLIDMYAKCGGIEEAYKVFRDVE-ERNVVLWNAMISGLSRHACSLEVMILFEKMQQMG 425
           +++LI MYAK G I  A + F  +  ER+ V W +MI  L++H  + E + LFE M   G
Sbjct: 452 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 511

Query: 426 LSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKEHHLAPNVLHYSCMVDTLSRAGQTFEA 485
           L P+++T+V V SAC   GLV +G++YFD+M     + P + HY+CMVD   RAG   EA
Sbjct: 512 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 571

Query: 486 YDLISKMPFNASASMWGSLLASCRTHGNLELAEIAAKNLFVMEPHNAGNYVLLSNMYAAN 545
            + I KMP       WGSLL++CR H N++L ++AA+ L ++EP N+G Y  L+N+Y+A 
Sbjct: 572 QEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 631

Query: 546 GKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVHSFMVGEMNHPKISEIYSKLNELMEEL 605
           GKW+E AK RK +K+  VKKE+G SWIE+K KVH F V +  HP+ +EIY  + ++ +E+
Sbjct: 632 GKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEI 691

Query: 606 QKLGYKTETQHDLHQVGETVKPELLGHHSEKLAFTMGLLFLPTNAPIRIMKNLRICGDCH 635
           +K+GY  +T   LH + E VK ++L HHSEKLA   GL+  P    +RIMKNLR+C DCH
Sbjct: 692 KKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCH 751

BLAST of CcUC08G152340 vs. TAIR 10
Match: AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 443.7 bits (1140), Expect = 2.4e-124
Identity = 227/602 (37.71%), Postives = 353/602 (58.64%), Query Frame = 0

Query: 63  VLEILKLCAKRRLFLQGKACHAQILLMGLKTDTLTSNILINMYSKCGSVDFARQVFDEMP 122
           ++ +LKL +       GK  H Q++ +G ++  L  + L+ MY+  G +  A++VF  + 
Sbjct: 142 LMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201

Query: 123 SRSL------------------------------VSWNTMIGSLTQNGEENEALGLLLQM 182
            R+                               VSW  MI  L QNG   EA+    +M
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261

Query: 183 QREGSPFSEFTISSVLCAYAAKCALSECQLLHAFAVKAAMDLNVFVATALLNVYAKCGLM 242
           + +G    ++   SVL A     A++E + +HA  ++     +++V +AL+++Y KC  +
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCL 321

Query: 243 KNAAGVFYSMPERSVVTWSSMAAGYVQNEMYEEALALFRKAWEIGLKQDEFLMSSVICAC 302
             A  VF  M +++VV+W++M  GY Q    EEA+ +F      G+  D + +   I AC
Sbjct: 322 HYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381

Query: 303 AGLAAMIEGKQVNALLFKSGFCSNIFVASSLIDMYAKCGGIEEAYKVFRDVEERNVVLWN 362
           A ++++ EG Q +     SG    + V++SL+ +Y KCG I+++ ++F ++  R+ V W 
Sbjct: 382 ANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWT 441

Query: 363 AMISGLSRHACSLEVMILFEKMQQMGLSPNNVTFVSVLSACGRMGLVEKGQKYFDLMIKE 422
           AM+S  ++   ++E + LF+KM Q GL P+ VT   V+SAC R GLVEKGQ+YF LM  E
Sbjct: 442 AMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSE 501

Query: 423 HHLAPNVLHYSCMVDTLSRAGQTFEAYDLISKMPFNASASMWGSLLASCRTHGNLELAEI 482
           + + P++ HYSCM+D  SR+G+  EA   I+ MPF   A  W +LL++CR  GNLE+ + 
Sbjct: 502 YGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKW 561

Query: 483 AAKNLFVMEPHNAGNYVLLSNMYAANGKWDEVAKARKLLKESDVKKEKGKSWIEIKDKVH 542
           AA++L  ++PH+   Y LLS++YA+ GKWD VA+ R+ ++E +VKKE G+SWI+ K K+H
Sbjct: 562 AAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLH 621

Query: 543 SFMVGEMNHPKISEIYSKLNELMEELQKLGYKTETQHDLHQVGETVKPELLGHHSEKLAF 602
           SF   + + P + +IY+KL EL  ++   GYK +T    H V E VK ++L +HSE+LA 
Sbjct: 622 SFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAI 681

Query: 603 TMGLLFLPTNAPIRIMKNLRICGDCHSFMKFASKFVRRNVIVRDTNRFHHFKNGCCSCGD 635
             GL+F+P+  PIR+ KNLR+C DCH+  K  S    R ++VRD  RFH FK+G CSCGD
Sbjct: 682 AFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGD 741

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038884459.10.0e+0090.95pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Benincasa ... [more]
XP_004140992.10.0e+0089.81pentatricopeptide repeat-containing protein At5g04780, mitochondrial [Cucumis sa... [more]
XP_008456610.10.0e+0089.25PREDICTED: pentatricopeptide repeat-containing protein At5g04780 [Cucumis melo][more]
XP_023550933.10.0e+0087.07pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X1 ... [more]
XP_022992700.10.0e+0086.91pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X1 ... [more]
Match NameE-valueIdentityDescription
Q9LZ199.1e-20160.14Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop... [more]
Q9LIQ71.8e-12740.69Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... [more]
Q9LTF45.1e-12741.46Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis th... [more]
Q9ZUW33.1e-12440.34Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX... [more]
Q9SHZ89.0e-12438.21Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A1S3C4B60.0e+0089.25pentatricopeptide repeat-containing protein At5g04780 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1JWF90.0e+0086.91pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X1 ... [more]
A0A6J1FDG70.0e+0086.28pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X1 ... [more]
A0A6J1BZB93.1e-30584.07pentatricopeptide repeat-containing protein At5g04780 OS=Momordica charantia OX=... [more]
A0A6J1JQM77.8e-29682.33pentatricopeptide repeat-containing protein At5g04780, mitochondrial isoform X3 ... [more]
Match NameE-valueIdentityDescription
AT5G04780.16.5e-20260.14Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G52630.13.6e-12841.46mitochondrial RNAediting factor 1 [more]
AT2G27610.12.2e-12540.34Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G22070.16.4e-12538.21pentatricopeptide (PPR) repeat-containing protein [more]
AT1G68930.12.4e-12437.71pentatricopeptide (PPR) repeat-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 99..126
e-value: 4.4E-5
score: 21.4
coord: 329..362
e-value: 6.2E-4
score: 17.8
coord: 228..252
e-value: 0.0023
score: 16.0
coord: 364..398
e-value: 0.0011
score: 17.0
coord: 127..157
e-value: 2.3E-5
score: 22.3
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 326..373
e-value: 4.2E-11
score: 42.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 97..124
e-value: 4.8E-5
score: 23.3
coord: 200..226
e-value: 0.0079
score: 16.4
coord: 127..156
e-value: 3.3E-6
score: 27.0
coord: 401..425
e-value: 0.11
score: 12.8
coord: 228..257
e-value: 4.5E-5
score: 23.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 362..396
score: 8.681407
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 327..361
score: 10.840783
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 296..326
score: 8.780059
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 226..260
score: 9.602157
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 94..128
score: 10.599635
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 386..569
e-value: 3.6E-12
score: 48.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 35..175
e-value: 1.5E-21
score: 78.6
coord: 176..278
e-value: 1.5E-17
score: 65.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 279..385
e-value: 1.6E-24
score: 88.9
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 500..624
e-value: 8.1E-39
score: 132.4
NoneNo IPR availablePANTHERPTHR24015OS07G0578800 PROTEIN-RELATEDcoord: 61..625
NoneNo IPR availablePANTHERPTHR24015:SF1063OS12G0156900 PROTEINcoord: 61..625

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G152340.1CcUC08G152340.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding