CcUC08G151310 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G151310
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Prolamin_like domain-containing protein
Location	CicolChr08: 19538167 .. 19538568 (-)
RNA-Seq Expression	CcUC08G151310
Synteny	CcUC08G151310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAGGGAAATAACACAATGGGAGCAATCGTGATTCTCTTATTGGCAATAAACTTGGCAGCAACCTTAGTTCAATCTTCTGGGGTAGACGAGGACTACAATTCACCGATATGGGATGGATGGGTAGATGAGGATAGAGGAATAAATCTACGACCCTGTTTGGATAGGATGAAGAGTGCAAAATGTCAGGTGGAACTTTACAATTACTACTTCAACATAAGTAAGAAGGAATTGGATATGAATTGTTGTGTCTTTGTCAAAGTCATGGGAAAGAAGTGTGCACGAGCATTTGCAAGTTGGTACCAGTTTCCTGGGTTGGAAATCTACGAGCCCAATCCTATGAAGGTGTATAATAATTGTGTTAGAAGACTTGGCGCTCTCCCACCAGCGCCATTTTAA

mRNA sequence

ATGGCGAAGGGAAATAACACAATGGGAGCAATCGTGATTCTCTTATTGGCAATAAACTTGGCAGCAACCTTAGTTCAATCTTCTGGGGTAGACGAGGACTACAATTCACCGATATGGGATGGATGGGTAGATGAGGATAGAGGAATAAATCTACGACCCTGTTTGGATAGGATGAAGAGTGCAAAATGTCAGGTGGAACTTTACAATTACTACTTCAACATAAGTAAGAAGGAATTGGATATGAATTGTTGTGTCTTTGTCAAAGTCATGGGAAAGAAGTGTGCACGAGCATTTGCAAGTTGGTACCAGTTTCCTGGGTTGGAAATCTACGAGCCCAATCCTATGAAGGTGTATAATAATTGTGTTAGAAGACTTGGCGCTCTCCCACCAGCGCCATTTTAA

Coding sequence (CDS)

ATGGCGAAGGGAAATAACACAATGGGAGCAATCGTGATTCTCTTATTGGCAATAAACTTGGCAGCAACCTTAGTTCAATCTTCTGGGGTAGACGAGGACTACAATTCACCGATATGGGATGGATGGGTAGATGAGGATAGAGGAATAAATCTACGACCCTGTTTGGATAGGATGAAGAGTGCAAAATGTCAGGTGGAACTTTACAATTACTACTTCAACATAAGTAAGAAGGAATTGGATATGAATTGTTGTGTCTTTGTCAAAGTCATGGGAAAGAAGTGTGCACGAGCATTTGCAAGTTGGTACCAGTTTCCTGGGTTGGAAATCTACGAGCCCAATCCTATGAAGGTGTATAATAATTGTGTTAGAAGACTTGGCGCTCTCCCACCAGCGCCATTTTAA

Protein sequence

MAKGNNTMGAIVILLLAINLAATLVQSSGVDEDYNSPIWDGWVDEDRGINLRPCLDRMKSAKCQVELYNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMKVYNNCVRRLGALPPAPF

Homology

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BLAST of CcUC08G151310 vs. NCBI nr
Match: KAA0046835.1 (hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA0046840.1 hypothetical protein E6C27_scaffold216G001400 [Cucumis melo var. makuwa] >KAA0065932.1 hypothetical protein E6C27_scaffold10942G00010 [Cucumis melo var. makuwa] >TYK04499.1 hypothetical protein E5676_scaffold409G001130 [Cucumis melo var. makuwa] >TYK14838.1 hypothetical protein E5676_scaffold6575G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 235.7 bits (600), Expect = 2.3e-58
Identity = 110/126 (87.30%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 8   MGAIVILLLAINLAATLVQSSGVDEDYNSPIWDGWVDEDRGINLRPCLDRMKSAKCQVEL 67
           M AIVILL AINL + LVQSSGVDEDYNSPIWDGWVDEDRG  LRPCLDRM+SAKCQVEL
Sbjct: 1   MRAIVILLFAINL-SKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVEL 60

Query: 68  YNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMKVYNNCVRRLGA 127
           YNYYFNISKKELD+NCCVFVKVMGKKCA+AF  WYQFPGLEIYEPNPMKVYNNC+ RL A
Sbjct: 61  YNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDA 120

Query: 128 LPPAPF 134
            PPAPF
Sbjct: 121 PPPAPF 125

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BLAST of CcUC08G151310 vs. NCBI nr
Match: KAG6578867.1 (hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 220.3 bits (560), Expect = 9.8e-54
Identity = 103/126 (81.75%), Postives = 111/126 (88.10%), Query Frame = 0


Query: 8   MGAIVILLLAINLAATLVQSSGVDEDYNSPIWDGWVDEDRGINLRPCLDRMKSAKCQVEL 67
           MGA+VILLLAINL A L Q S  D+DYNSPIWD WVDEDRGINLRPCLD MKSAKCQVEL
Sbjct: 1   MGAMVILLLAINL-AFLAQPSTADDDYNSPIWDRWVDEDRGINLRPCLDMMKSAKCQVEL 60

Query: 68  YNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMKVYNNCVRRLGA 127
           YNYYFNISKKELD+NCCVFVKVMGK+CARAFA W++FP  E++E NPMKVY NCV RL A
Sbjct: 61  YNYYFNISKKELDLNCCVFVKVMGKRCARAFAGWFRFPEFEVFELNPMKVYKNCVGRLDA 120

Query: 128 LPPAPF 134
           LPPAPF
Sbjct: 121 LPPAPF 125

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BLAST of CcUC08G151310 vs. NCBI nr
Match: KAA0046841.1 (hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK04493.1 hypothetical protein E5676_scaffold409G001070 [Cucumis melo var. makuwa])

HSP 1 Score: 219.2 bits (557), Expect = 2.2e-53
Identity = 102/135 (75.56%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 1   MAKGNNTMGAIV-ILLLAINLAATLVQS-SGVDEDYNSPIWDGWVDEDRGINLRPCLDRM 60
           MA G NT+G I+ ILLLA+NLA  +  S + VD+DYNSPIW+GWVDEDR  NLRPCLD M
Sbjct: 1   MANGTNTVGGILTILLLAVNLAILVHPSMADVDDDYNSPIWNGWVDEDRASNLRPCLDMM 60

Query: 61  KSAKCQVELYNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMKVY 120
           KSAKCQV+LYNYYFNISKKELD+ CCVFVK+MGK CA AFA WY+FPGLE+YEPNPM VY
Sbjct: 61  KSAKCQVQLYNYYFNISKKELDLQCCVFVKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVY 120

Query: 121 NNCVRRLGALPPAPF 134
           NNCV RL ALPP PF
Sbjct: 121 NNCVGRLQALPPTPF 135

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BLAST of CcUC08G151310 vs. NCBI nr
Match: KAE8646662.1 (hypothetical protein Csa_004797, partial [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 3.2e-44
Identity = 88/111 (79.28%), Postives = 96/111 (86.49%), Query Frame = 0


Query: 6   NTMGAIVILLLAINLAATLVQSSGVDEDYNSPIWDGWVDEDRGINLRPCLDRMKSAKCQV 65
           N M A++ILL  INL A LVQ  GVDEDYNS IW+ W+DEDR   LRPCLDRM+SAKCQV
Sbjct: 32  NAMRAMLILLSTINL-AKLVQPYGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQV 91

Query: 66  ELYNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMK 117
           ELYNYYFNISK+ELD+NCCVFVKVMGKKCA+AF  WYQFPGLEIYEPNPMK
Sbjct: 92  ELYNYYFNISKEELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMK 141

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BLAST of CcUC08G151310 vs. NCBI nr
Match: KAG6575249.1 (hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 181.0 bits (458), Expect = 6.6e-42
Identity = 82/131 (62.60%), Postives = 102/131 (77.86%), Query Frame = 0


Query: 1   MAKGNNTMGAIVILLLAINLAATLVQSSGVDEDYNSPIWDGWVDEDRGINLRPCLDRMKS 60
           MAK  +T+GA+V+LLLA+NL    V+ +  D DYNSPIWD W+DEDR   LRPCL+ MKS
Sbjct: 1   MAKETSTLGAMVVLLLAVNLQG-FVRVTSADVDYNSPIWDRWLDEDRAYYLRPCLNLMKS 60

Query: 61  AKCQVELYNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMKVYNN 120
           AKCQV+LYN YFN+SK+ELD+NCCVFVKVMGK CA  FA W+ +P  E+Y+PNPM +Y  
Sbjct: 61  AKCQVQLYNNYFNLSKEELDLNCCVFVKVMGKNCALDFAGWFDYPIFEVYKPNPMNLYKR 120

Query: 121 CVRRL-GALPP 131
           CV RL  ++PP
Sbjct: 121 CVARLSSSIPP 130

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BLAST of CcUC08G151310 vs. ExPASy TrEMBL
Match: A0A5D3C280 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001130 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58
Identity = 110/126 (87.30%), Postives = 115/126 (91.27%), Query Frame = 0


Query: 8   MGAIVILLLAINLAATLVQSSGVDEDYNSPIWDGWVDEDRGINLRPCLDRMKSAKCQVEL 67
           M AIVILL AINL + LVQSSGVDEDYNSPIWDGWVDEDRG  LRPCLDRM+SAKCQVEL
Sbjct: 1   MRAIVILLFAINL-SKLVQSSGVDEDYNSPIWDGWVDEDRGYTLRPCLDRMRSAKCQVEL 60

Query: 68  YNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMKVYNNCVRRLGA 127
           YNYYFNISKKELD+NCCVFVKVMGKKCA+AF  WYQFPGLEIYEPNPMKVYNNC+ RL A
Sbjct: 61  YNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCITRLDA 120

Query: 128 LPPAPF 134
            PPAPF
Sbjct: 121 PPPAPF 125

[Close]

BLAST of CcUC08G151310 vs. ExPASy TrEMBL
Match: A0A0A0KEB8 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G054340 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.5e-55
Identity = 106/132 (80.30%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 1   MAKGNNTMGAIVILLLAINLAATLVQSSGVDEDYNSPIWDGWVDEDRGINLRPCLDRMKS 60
           MA   N M A+VILL AINL A LVQSSGVDEDYNS IW+ W+DEDR   LRPCLDRM+S
Sbjct: 1   MANKTNAMRAMVILLSAINL-AKLVQSSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRS 60

Query: 61  AKCQVELYNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMKVYNN 120
           AKCQVELYNYYFNISKKELD+NCCVFVKVMGKKCA+AF  WYQFPGLEIYEPNPMKVYNN
Sbjct: 61  AKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNN 120

Query: 121 CVRRLGALPPAP 133
           C  RL A PP P
Sbjct: 121 CATRLSAPPPTP 131

[Close]

BLAST of CcUC08G151310 vs. ExPASy TrEMBL
Match: A0A5A7TZR1 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001070 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.1e-53
Identity = 102/135 (75.56%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 1   MAKGNNTMGAIV-ILLLAINLAATLVQS-SGVDEDYNSPIWDGWVDEDRGINLRPCLDRM 60
           MA G NT+G I+ ILLLA+NLA  +  S + VD+DYNSPIW+GWVDEDR  NLRPCLD M
Sbjct: 1   MANGTNTVGGILTILLLAVNLAILVHPSMADVDDDYNSPIWNGWVDEDRASNLRPCLDMM 60

Query: 61  KSAKCQVELYNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMKVY 120
           KSAKCQV+LYNYYFNISKKELD+ CCVFVK+MGK CA AFA WY+FPGLE+YEPNPM VY
Sbjct: 61  KSAKCQVQLYNYYFNISKKELDLQCCVFVKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVY 120

Query: 121 NNCVRRLGALPPAPF 134
           NNCV RL ALPP PF
Sbjct: 121 NNCVGRLQALPPTPF 135

[Close]

BLAST of CcUC08G151310 vs. ExPASy TrEMBL
Match: A0A0A0KQ41 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G381840 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 7.6e-36
Identity = 74/130 (56.92%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 5   NNTMGAIVILLLAINL--AATLVQSSGVDEDYNSPIWDGWVDEDRGINLRPCLDRMKSAK 64
           N+T   +V+++L++ +  +  LVQ S VD++  S IW  W+DEDR   L PCL  M+S K
Sbjct: 3   NSTRVLLVVVMLSLLVVDSLALVQPSTVDDNGISSIWSDWLDEDRAPTLAPCLHMMRSEK 62

Query: 65  CQVELYNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMKVYNNCV 124
           CQVELYNYYFNISKKELD++CCV+V  MGKKCA AF  W+ FP LE  +PNPMKVYNNC 
Sbjct: 63  CQVELYNYYFNISKKELDLSCCVYVNYMGKKCAAAFEFWFSFPSLEALKPNPMKVYNNCF 122

Query: 125 RRLGALPPAP 133
           +RL    P P
Sbjct: 123 KRLTFPAPTP 132

[Close]

BLAST of CcUC08G151310 vs. ExPASy TrEMBL
Match: A0A0A0L535 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008300 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.8e-30
Identity = 68/135 (50.37%), Postives = 92/135 (68.15%), Query Frame = 0


Query: 1   MAKGNNTMGA---IVILLLAINLAATLVQSSGVDEDYNSPIWDGWVDEDRGINLRPCLDR 60
           M K +N+ GA   +V+L L +  +  LV  S +D++  S IW GW+D+DR   L  CL  
Sbjct: 1   MGKTSNSTGALLLVVMLSLLVVDSLALVHPSIIDDNGISSIWSGWIDKDRAPILASCLYL 60

Query: 61  MKSAKCQVELYNYYFNISKKELDMNCCVFVKVMGKKCARAFASWYQFPGLEIYEPNPMKV 120
           MKS KCQVELYNYYFN SKKE+D++CCV+V  +G++CA +F SW+   G +  +PNPMK+
Sbjct: 61  MKSDKCQVELYNYYFNKSKKEVDLSCCVYVNYIGEECAASFESWFSSLGFKALKPNPMKL 120

Query: 121 YNNCVRRLGALPPAP 133
           YNNC +RL    PAP
Sbjct: 121 YNNCFKRLTV--PAP 133

The following BLAST results are available for this feature:

BLAST of CcUC08G151310 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046835.1	2.3e-58	87.30	hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA004...	[more]
KAG6578867.1	9.8e-54	81.75	hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0046841.1	2.2e-53	75.56	hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK044...	[more]
KAE8646662.1	3.2e-44	79.28	hypothetical protein Csa_004797, partial [Cucumis sativus]	[more]
KAG6575249.1	6.6e-42	62.60	hypothetical protein SDJN03_25888, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC08G151310 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC08G151310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C280	1.1e-58	87.30	Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0KEB8	2.5e-55	80.30	Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G0543...	[more]
A0A5A7TZR1	1.1e-53	75.56	Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A0A0KQ41	7.6e-36	56.92	Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G3818...	[more]
A0A0A0L535	4.8e-30	50.37	Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G0083...	[more]

BLAST of CcUC08G151310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008502	Prolamin-like domain	PFAM	PF05617	Prolamin_like	coord: 54..121 e-value: 6.2E-7 score: 29.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G151310.1	CcUC08G151310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0110165	cellular anatomical entity