CcUC08G151290 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G151290
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionProlamin_like domain-containing protein
LocationCicolChr08: 19532677 .. 19533018 (-)
RNA-Seq ExpressionCcUC08G151290
SyntenyCcUC08G151290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATCTTATTTCAACCTTCCATGGCAGATGAAAGACTACAATTCACCAATATGGGATGGGGGGTGGACGAGGATAGAGGACCAAATCTACGACCATGTTTGGATATGACGAAGAGTGCAAACTGTCAAGTAGAATTATATAATTACTATTTCAATATAAGCAAGAAGGAATTGGATCTATATTGTTGCATCTTCGTCAAAGTCATGGGAAAGGAATGTGCTCAAGCTTTTGCTGGTTGGTACAAGTTTCTTGGTTTGGGAGTCTACGAGCCTAATCCTATGAAAGTTTACAACAATTGTGTTGGAAGACTTGATGCTCTCCCACCCACATCATTTTAA

mRNA sequence

ATGGCAATCTTATTTCAACCTTCCATGGCAGATGAAAGACTACAATTCACCAATATGGGATGGGGGGTGGACGAGGATAGAGGACCAAATCTACGACCATGTTTGGATATGACGAAGAGTGCAAACTGTCAAGTAGAATTATATAATTACTATTTCAATATAAGCAAGAAGGAATTGGATCTATATTGTTGCATCTTCGTCAAAGTCATGGGAAAGGAATGTGCTCAAGCTTTTGCTGGTTGGTACAAGTTTCTTGGTTTGGGAGTCTACGAGCCTAATCCTATGAAAGTTTACAACAATTGTGTTGGAAGACTTGATGCTCTCCCACCCACATCATTTTAA

Coding sequence (CDS)

ATGGCAATCTTATTTCAACCTTCCATGGCAGATGAAAGACTACAATTCACCAATATGGGATGGGGGGTGGACGAGGATAGAGGACCAAATCTACGACCATGTTTGGATATGACGAAGAGTGCAAACTGTCAAGTAGAATTATATAATTACTATTTCAATATAAGCAAGAAGGAATTGGATCTATATTGTTGCATCTTCGTCAAAGTCATGGGAAAGGAATGTGCTCAAGCTTTTGCTGGTTGGTACAAGTTTCTTGGTTTGGGAGTCTACGAGCCTAATCCTATGAAAGTTTACAACAATTGTGTTGGAAGACTTGATGCTCTCCCACCCACATCATTTTAA

Protein sequence

MAILFQPSMADERLQFTNMGWGVDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKELDLYCCIFVKVMGKECAQAFAGWYKFLGLGVYEPNPMKVYNNCVGRLDALPPTSF
Homology
BLAST of CcUC08G151290 vs. NCBI nr
Match: KAA0046841.1 (hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK04493.1 hypothetical protein E5676_scaffold409G001070 [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 9.6e-42
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 0

Query: 1   MAILFQPSMADERLQFTNMGWG--VDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKE 60
           +AIL  PSMAD    + +  W   VDEDR  NLRPCLDM KSA CQV+LYNYYFNISKKE
Sbjct: 21  LAILVHPSMADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKE 80

Query: 61  LDLYCCIFVKVMGKECAQAFAGWYKFLGLGVYEPNPMKVYNNCVGRLDALPPTSF 114
           LDL CC+FVK+MGK CA AFAGWY+F GL VYEPNPM VYNNCVGRL ALPPT F
Sbjct: 81  LDLQCCVFVKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF 135

BLAST of CcUC08G151290 vs. NCBI nr
Match: KAG6578867.1 (hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 171.0 bits (432), Expect = 5.8e-39
Identity = 80/113 (70.80%), Postives = 87/113 (76.99%), Query Frame = 0

Query: 1   MAILFQPSMADERLQFTNMGWGVDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKELD 60
           +A L QPS AD+          VDEDRG NLRPCLDM KSA CQVELYNYYFNISKKELD
Sbjct: 13  LAFLAQPSTADDDYNSPIWDRWVDEDRGINLRPCLDMMKSAKCQVELYNYYFNISKKELD 72

Query: 61  LYCCIFVKVMGKECAQAFAGWYKFLGLGVYEPNPMKVYNNCVGRLDALPPTSF 114
           L CC+FVKVMGK CA+AFAGW++F    V+E NPMKVY NCVGRLDALPP  F
Sbjct: 73  LNCCVFVKVMGKRCARAFAGWFRFPEFEVFELNPMKVYKNCVGRLDALPPAPF 125

BLAST of CcUC08G151290 vs. NCBI nr
Match: KAA0046835.1 (hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA0046840.1 hypothetical protein E6C27_scaffold216G001400 [Cucumis melo var. makuwa] >KAA0065932.1 hypothetical protein E6C27_scaffold10942G00010 [Cucumis melo var. makuwa] >TYK04499.1 hypothetical protein E5676_scaffold409G001130 [Cucumis melo var. makuwa] >TYK14838.1 hypothetical protein E5676_scaffold6575G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 162.9 bits (411), Expect = 1.6e-36
Identity = 73/94 (77.66%), Postives = 79/94 (84.04%), Query Frame = 0

Query: 20  GWGVDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKELDLYCCIFVKVMGKECAQAFA 79
           GW VDEDRG  LRPCLD  +SA CQVELYNYYFNISKKELDL CC+FVKVMGK+CAQAF 
Sbjct: 33  GW-VDEDRGYTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFT 92

Query: 80  GWYKFLGLGVYEPNPMKVYNNCVGRLDALPPTSF 114
            WY+F GL +YEPNPMKVYNNC+ RLDA PP  F
Sbjct: 93  FWYQFPGLEIYEPNPMKVYNNCITRLDAPPPAPF 125

BLAST of CcUC08G151290 vs. NCBI nr
Match: KAE8646662.1 (hypothetical protein Csa_004797, partial [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-27
Identity = 62/96 (64.58%), Postives = 71/96 (73.96%), Query Frame = 0

Query: 1   MAILFQPSMADERLQFTNMGWGVDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKELD 60
           +A L QP   DE    +     +DEDR   LRPCLD  +SA CQVELYNYYFNISK+ELD
Sbjct: 46  LAKLVQPYGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKEELD 105

Query: 61  LYCCIFVKVMGKECAQAFAGWYKFLGLGVYEPNPMK 97
           L CC+FVKVMGK+CAQAF  WY+F GL +YEPNPMK
Sbjct: 106 LNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMK 141

BLAST of CcUC08G151290 vs. NCBI nr
Match: KGN50979.1 (hypothetical protein Csa_008880 [Cucumis sativus])

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-27
Identity = 62/108 (57.41%), Postives = 71/108 (65.74%), Query Frame = 0

Query: 4   LFQPSMADERLQFTNMGWGVDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKELDLYC 63
           L QPS  D+    +     +DEDR P L PCL M +S  CQVELYNYYFNISKKELDL C
Sbjct: 24  LVQPSTVDDNGISSIWSDWLDEDRAPTLAPCLHMMRSEKCQVELYNYYFNISKKELDLSC 83

Query: 64  CIFVKVMGKECAQAFAGWYKFLGLGVYEPNPMKVYNNCVGRLDALPPT 112
           C++V  MGK+CA AF  W+ F  L   +PNPMKVYNNC  RL    PT
Sbjct: 84  CVYVNYMGKKCAAAFEFWFSFPSLEALKPNPMKVYNNCFKRLTFPAPT 131

BLAST of CcUC08G151290 vs. ExPASy TrEMBL
Match: A0A5A7TZR1 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001070 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 4.6e-42
Identity = 84/115 (73.04%), Postives = 91/115 (79.13%), Query Frame = 0

Query: 1   MAILFQPSMADERLQFTNMGWG--VDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKE 60
           +AIL  PSMAD    + +  W   VDEDR  NLRPCLDM KSA CQV+LYNYYFNISKKE
Sbjct: 21  LAILVHPSMADVDDDYNSPIWNGWVDEDRASNLRPCLDMMKSAKCQVQLYNYYFNISKKE 80

Query: 61  LDLYCCIFVKVMGKECAQAFAGWYKFLGLGVYEPNPMKVYNNCVGRLDALPPTSF 114
           LDL CC+FVK+MGK CA AFAGWY+F GL VYEPNPM VYNNCVGRL ALPPT F
Sbjct: 81  LDLQCCVFVKIMGKYCAHAFAGWYEFPGLEVYEPNPMIVYNNCVGRLQALPPTPF 135

BLAST of CcUC08G151290 vs. ExPASy TrEMBL
Match: A0A5D3C280 (Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001130 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 7.7e-37
Identity = 73/94 (77.66%), Postives = 79/94 (84.04%), Query Frame = 0

Query: 20  GWGVDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKELDLYCCIFVKVMGKECAQAFA 79
           GW VDEDRG  LRPCLD  +SA CQVELYNYYFNISKKELDL CC+FVKVMGK+CAQAF 
Sbjct: 33  GW-VDEDRGYTLRPCLDRMRSAKCQVELYNYYFNISKKELDLNCCVFVKVMGKKCAQAFT 92

Query: 80  GWYKFLGLGVYEPNPMKVYNNCVGRLDALPPTSF 114
            WY+F GL +YEPNPMKVYNNC+ RLDA PP  F
Sbjct: 93  FWYQFPGLEIYEPNPMKVYNNCITRLDAPPPAPF 125

BLAST of CcUC08G151290 vs. ExPASy TrEMBL
Match: A0A0A0KEB8 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G054340 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.2e-35
Identity = 74/111 (66.67%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 1   MAILFQPSMADERLQFTNMGWGVDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKELD 60
           +A L Q S  DE    +     +DEDR   LRPCLD  +SA CQVELYNYYFNISKKELD
Sbjct: 20  LAKLVQSSGVDEDYNSSIWNDWLDEDRAFTLRPCLDRMRSAKCQVELYNYYFNISKKELD 79

Query: 61  LYCCIFVKVMGKECAQAFAGWYKFLGLGVYEPNPMKVYNNCVGRLDALPPT 112
           L CC+FVKVMGK+CAQAF  WY+F GL +YEPNPMKVYNNC  RL A PPT
Sbjct: 80  LNCCVFVKVMGKKCAQAFTFWYQFPGLEIYEPNPMKVYNNCATRLSAPPPT 130

BLAST of CcUC08G151290 vs. ExPASy TrEMBL
Match: A0A0A0KQ41 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G381840 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 8.5e-28
Identity = 62/108 (57.41%), Postives = 71/108 (65.74%), Query Frame = 0

Query: 4   LFQPSMADERLQFTNMGWGVDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKELDLYC 63
           L QPS  D+    +     +DEDR P L PCL M +S  CQVELYNYYFNISKKELDL C
Sbjct: 24  LVQPSTVDDNGISSIWSDWLDEDRAPTLAPCLHMMRSEKCQVELYNYYFNISKKELDLSC 83

Query: 64  CIFVKVMGKECAQAFAGWYKFLGLGVYEPNPMKVYNNCVGRLDALPPT 112
           C++V  MGK+CA AF  W+ F  L   +PNPMKVYNNC  RL    PT
Sbjct: 84  CVYVNYMGKKCAAAFEFWFSFPSLEALKPNPMKVYNNCFKRLTFPAPT 131

BLAST of CcUC08G151290 vs. ExPASy TrEMBL
Match: A0A0A0L535 (Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G008300 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.3e-24
Identity = 57/110 (51.82%), Postives = 72/110 (65.45%), Query Frame = 0

Query: 4   LFQPSMADER-LQFTNMGWGVDEDRGPNLRPCLDMTKSANCQVELYNYYFNISKKELDLY 63
           L  PS+ D+  +     GW +D+DR P L  CL + KS  CQVELYNYYFN SKKE+DL 
Sbjct: 27  LVHPSIIDDNGISSIWSGW-IDKDRAPILASCLYLMKSDKCQVELYNYYFNKSKKEVDLS 86

Query: 64  CCIFVKVMGKECAQAFAGWYKFLGLGVYEPNPMKVYNNCVGRLDA-LPPT 112
           CC++V  +G+ECA +F  W+  LG    +PNPMK+YNNC  RL    PPT
Sbjct: 87  CCVYVNYIGEECAASFESWFSSLGFKALKPNPMKLYNNCFKRLTVPAPPT 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0046841.19.6e-4273.04hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa] >TYK044... [more]
KAG6578867.15.8e-3970.80hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0046835.11.6e-3677.66hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa] >KAA004... [more]
KAE8646662.11.8e-2764.58hypothetical protein Csa_004797, partial [Cucumis sativus][more]
KGN50979.11.8e-2757.41hypothetical protein Csa_008880 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TZR14.6e-4273.04Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3C2807.7e-3777.66Prolamin_like domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A0A0KEB84.2e-3566.67Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G0543... [more]
A0A0A0KQ418.5e-2857.41Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G3818... [more]
A0A0A0L5353.3e-2451.82Prolamin_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G0083... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008502Prolamin-like domainPFAMPF05617Prolamin_likecoord: 34..101
e-value: 6.3E-6
score: 26.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G151290.1CcUC08G151290.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0110165 cellular anatomical entity