CcUC08G151200 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G151200
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	MRN complex-interacting protein isoform X2
Location	CicolChr08: 19441246 .. 19442475 (-)
RNA-Seq Expression	CcUC08G151200
Synteny	CcUC08G151200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGTAAACGCATTTGAGAATCGAAGAAGGAAATGGCGACGATCTTCACCGCCGTCCAGTGTTTTCAATGCTCCACCATGCAGGTACCGATCTCTTTCTCTCTGTTTCTTAATCCTTCAATGTCTCTCTCCGTAACTTCTGTAATGGCGGTGGTTTCGATTTAGGTGAAGCAGCAGCGAAAGAGCGGGAATAAGTGGATCTGTGCAGTGTGTAACGAGAGGCAATCGGTGCAGAAGGTGTTTGCTCGAGGTCCTATGGCTAAAGACGTCCGTAAATTCGTACAGAGCTTCAATATGTCTCGGAAATATGCGGATGAACAGATGAAAGTCGATGAACTACTTGACGGAGGAACTGTCGACGACGATGAGCTTGATTGCAGCGCGAGGAGAAAAAGACGTAACGATTGGAGTGAATATCTCGATCCCGAGGAAGATCGCAGCGAAAGAGGAAGAGAAAACGCACGAGAATTAGGTCACTCAATTTTTAAATTAGCTTTTTCTTCAATTTCGTAGTAAAATCTTCATTAAATGATGATCTTTTCTCTGGATCAGGGAGTGATTTTATTGACGGAAAGATTGTGACGGAGCTTCCAGAAGTTAAAACTAGGAAATCTGATTCAACGAGGTGTTCAAGCTGGTCGGAAGGAGGAGAAGGCGATGGATTTTACAGACCAATTTTCTCGAAGAGGAAACATATTGCCAAGAATTTGAGCTCCCAAGGTAAAATTAGATGTTCATATAACTTCTTGTACTTTTTCAAGACCAAAAAAAAAAAATAATAATAAATAGAGCAAAGACGGCCAAAAAATTGCAGATGAGGTTCAAAACTGGGGGTCTCCATCAGCAATTCACACATCGAAATGGATTAAAGGCGATGATAAACTAATTTTCTCGAAGGCTAAGAACTTGAGTGCGCCTTTCCTGGACAAAAAGATGAGCAAGAACAGTCATAAAATTGGAGATGACATTCAAAACTGGGAGTTGCCATCGGACATTGAGGCATCAAAATGGAGTAGTAAAGGTATGTCGAAAGATGATGAAAATGCAAGGACGAAAAGTTGCATATTAGCAAAGGCAAGAGGATCTTCTAAGTGGAGTGAATACATAACTGAAGAAGAGAACTGTGGAGGCGGAAATCGAGAAAATAGGGCAGCAGAAGAGGGCATAGATATCTTGAAGATGATGATAAATGATGAAATTGTTGAAGACGATATCCACCCTGATTTCAAATGA

mRNA sequence

TGTAAACGCATTTGAGAATCGAAGAAGGAAATGGCGACGATCTTCACCGCCGTCCAGTGTTTTCAATGCTCCACCATGCAGGTGAAGCAGCAGCGAAAGAGCGGGAATAAGTGGATCTGTGCAGTGTGTAACGAGAGGCAATCGGTGCAGAAGGTGTTTGCTCGAGGTCCTATGGCTAAAGACGTCCGTAAATTCGTACAGAGCTTCAATATGTCTCGGAAATATGCGGATGAACAGATGAAAGTCGATGAACTACTTGACGGAGGAACTGTCGACGACGATGAGCTTGATTGCAGCGCGAGGAGAAAAAGACGTAACGATTGGAGTGAATATCTCGATCCCGAGGAAGATCGCAGCGAAAGAGGAAGAGAAAACGCACGAGAATTAGGGAGTGATTTTATTGACGGAAAGATTGTGACGGAGCTTCCAGAAGTTAAAACTAGGAAATCTGATTCAACGAGGTGTTCAAGCTGGTCGGAAGGAGGAGAAGGCGATGGATTTTACAGACCAATTTTCTCGAAGAGGAAACATATTGCCAAGAATTTGAGCTCCCAAGATGAGGTTCAAAACTGGGGGTCTCCATCAGCAATTCACACATCGAAATGGATTAAAGGCGATGATAAACTAATTTTCTCGAAGGCTAAGAACTTGAGTGCGCCTTTCCTGGACAAAAAGATGAGCAAGAACAGTCATAAAATTGGAGATGACATTCAAAACTGGGAGTTGCCATCGGACATTGAGGCATCAAAATGGAGTAGTAAAGGTATGTCGAAAGATGATGAAAATGCAAGGACGAAAAGTTGCATATTAGCAAAGGCAAGAGGATCTTCTAAGTGGAGTGAATACATAACTGAAGAAGAGAACTGTGGAGGCGGAAATCGAGAAAATAGGGCAGCAGAAGAGGGCATAGATATCTTGAAGATGATGATAAATGATGAAATTGTTGAAGACGATATCCACCCTGATTTCAAATGA

Coding sequence (CDS)

ATGGCGACGATCTTCACCGCCGTCCAGTGTTTTCAATGCTCCACCATGCAGGTGAAGCAGCAGCGAAAGAGCGGGAATAAGTGGATCTGTGCAGTGTGTAACGAGAGGCAATCGGTGCAGAAGGTGTTTGCTCGAGGTCCTATGGCTAAAGACGTCCGTAAATTCGTACAGAGCTTCAATATGTCTCGGAAATATGCGGATGAACAGATGAAAGTCGATGAACTACTTGACGGAGGAACTGTCGACGACGATGAGCTTGATTGCAGCGCGAGGAGAAAAAGACGTAACGATTGGAGTGAATATCTCGATCCCGAGGAAGATCGCAGCGAAAGAGGAAGAGAAAACGCACGAGAATTAGGGAGTGATTTTATTGACGGAAAGATTGTGACGGAGCTTCCAGAAGTTAAAACTAGGAAATCTGATTCAACGAGGTGTTCAAGCTGGTCGGAAGGAGGAGAAGGCGATGGATTTTACAGACCAATTTTCTCGAAGAGGAAACATATTGCCAAGAATTTGAGCTCCCAAGATGAGGTTCAAAACTGGGGGTCTCCATCAGCAATTCACACATCGAAATGGATTAAAGGCGATGATAAACTAATTTTCTCGAAGGCTAAGAACTTGAGTGCGCCTTTCCTGGACAAAAAGATGAGCAAGAACAGTCATAAAATTGGAGATGACATTCAAAACTGGGAGTTGCCATCGGACATTGAGGCATCAAAATGGAGTAGTAAAGGTATGTCGAAAGATGATGAAAATGCAAGGACGAAAAGTTGCATATTAGCAAAGGCAAGAGGATCTTCTAAGTGGAGTGAATACATAACTGAAGAAGAGAACTGTGGAGGCGGAAATCGAGAAAATAGGGCAGCAGAAGAGGGCATAGATATCTTGAAGATGATGATAAATGATGAAATTGTTGAAGACGATATCCACCCTGATTTCAAATGA

Protein sequence

MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFNMSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELGSDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQNWGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIEASKWSSKGMSKDDENARTKSCILAKARGSSKWSEYITEEENCGGGNRENRAAEEGIDILKMMINDEIVEDDIHPDFK

Homology

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BLAST of CcUC08G151200 vs. NCBI nr
Match: XP_038885326.1 (MRN complex-interacting protein [Benincasa hispida])

HSP 1 Score: 489.2 bits (1258), Expect = 2.7e-134
Identity = 252/315 (80.00%), Postives = 272/315 (86.35%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIF AVQCFQCSTMQVKQQRKSGN+WICAVCNE+QS+QKVFAR  MAKDVRKFVQ+FN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNRWICAVCNEKQSLQKVFARASMAKDVRKFVQNFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYADEQ K DELLDGG VD+D+LDCSARRKRRNDWSEYLDPEEDRS  GREN  EL 
Sbjct: 61  MSRKYADEQAKADELLDGGIVDEDKLDCSARRKRRNDWSEYLDPEEDRSHNGRENEGELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQN 180
           S+  D KIVTE+PEVKTRKS ST CS WSE GEGDGFYRPIFSKRKHIA NLSSQDEV+N
Sbjct: 121 SESTDEKIVTEIPEVKTRKSGSTSCSRWSE-GEGDGFYRPIFSKRKHIANNLSSQDEVRN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIEASK 240
           W S S I T KW KG+D+ I SKAKNLSAPF DKKMSKNSHKI D+IQNWEL S+IEASK
Sbjct: 181 WESTSTIQTMKWSKGNDEQIISKAKNLSAPFQDKKMSKNSHKIADEIQNWELQSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNRENRAAEEGIDILKMM 300
             SK MSKDDEN+RTK+ ILAK RG SSKWSEYITEE+NC G N EN A ++ IDILK +
Sbjct: 241 -GSKDMSKDDENSRTKTSILAKVRGPSSKWSEYITEEDNCRGRNGENMATDQCIDILKKI 300

Query: 301 INDEIVEDDIHPDFK 315
           INDEIV+DDIHPDFK
Sbjct: 301 INDEIVDDDIHPDFK 313

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BLAST of CcUC08G151200 vs. NCBI nr
Match: XP_008456719.1 (PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo] >KAA0031637.1 UPF0544 protein C5orf45-like protein [Cucumis melo var. makuwa] >TYK04473.1 UPF0544 protein C5orf45-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 486.5 bits (1251), Expect = 1.7e-133
Identity = 252/315 (80.00%), Postives = 269/315 (85.40%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIF AVQCFQCSTMQVKQQRKSGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYA+EQ  VD+L+ GG VDDD+LDCS RRKRRNDWSEYLDPEEDRS  GREN  EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQN 180
           SD    KI TELP++KT KS S  CSSWSE GEGDG YRP+FSKRKHIAKNLSSQDE+QN
Sbjct: 121 SDL---KIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIEASK 240
           W SPSAIHTSK  KGDD+  FS AK LSAPF DKKMSKNSHK+  +IQNWELPS+IEASK
Sbjct: 181 WESPSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNRENRAAEEGIDILKMM 300
           W     +KDDEN+RTKSCIL K RG SSKWSEYITEEENCGG N EN A E+G+DILK M
Sbjct: 241 W-----TKDDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-M 300

Query: 301 INDEIVEDDIHPDFK 315
           INDEIVEDDIHPDFK
Sbjct: 301 INDEIVEDDIHPDFK 305

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BLAST of CcUC08G151200 vs. NCBI nr
Match: XP_004141004.1 (MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical protein Csa_005258 [Cucumis sativus])

HSP 1 Score: 480.3 bits (1235), Expect = 1.2e-131
Identity = 245/315 (77.78%), Postives = 264/315 (83.81%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIF AVQCFQCSTMQVKQQRKSGNKWICAVCN++QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYA+EQ  VDEL+DGG VDDD+L CS RRK R+DWS+YLDP EDRS  GREN  EL 
Sbjct: 61  MSRKYANEQANVDELIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQN 180
           SD    KIVTELP++KT KS S  CSSWSE GEGDG YRP+FSKRKHIA NLSSQDE++N
Sbjct: 121 SDL---KIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEIRN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIEASK 240
           W SPSAIH SK  KGDD+   S AK LSAPF DKKM KN HK+ D+IQNWELPS+IEASK
Sbjct: 181 WESPSAIHASKLSKGDDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNRENRAAEEGIDILKMM 300
           W     SKDDEN RTKSCIL K RG SSKWSEYITEEENCGG N EN A EEG+D+LKMM
Sbjct: 241 W-----SKDDENLRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREEGMDVLKMM 300

Query: 301 INDEIVEDDIHPDFK 315
           IN+EIVEDDIHPDFK
Sbjct: 301 INEEIVEDDIHPDFK 307

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BLAST of CcUC08G151200 vs. NCBI nr
Match: XP_023549686.1 (MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo] >XP_023549687.1 MRN complex-interacting protein isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 378.3 bits (970), Expect = 6.7e-101
Identity = 214/318 (67.30%), Postives = 236/318 (74.21%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           M+TIF AVQCFQCSTMQVKQQR+SGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYADEQ KVDE+LD   VD+D+LD +A+RKRR+DWSEYLD EEDRS+ GREN RELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQN 180
           SDF DGKIVTELPE KTRK  ST CSS  EGGEG  FYRP+F KR HIAKN         
Sbjct: 121 SDFTDGKIVTELPEEKTRKHCSTSCSSRPEGGEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WGSPSAIHTSKWIKG---DDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIE 240
               SAI  SKW KG   DD+ +  KA NLS+               D+I+NWE  SDIE
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKA-NLSSK--------------DEIRNWESQSDIE 240

Query: 241 ASKWSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNRENRAAEEGIDIL 300
           ASKW SKGMSKDDENA    CILAK  G S KWSEY+TEE+       +N   E+ +D L
Sbjct: 241 ASKW-SKGMSKDDENA----CILAKVGGPSPKWSEYMTEED-------KNMGTEQDMDTL 278

Query: 301 KMMINDEIVEDDIHPDFK 315
           KM+INDEIVEDDIHPDFK
Sbjct: 301 KMIINDEIVEDDIHPDFK 278

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BLAST of CcUC08G151200 vs. NCBI nr
Match: XP_023549685.1 (MRN complex-interacting protein isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.9 bits (956), Expect = 2.8e-99
Identity = 214/333 (64.26%), Postives = 238/333 (71.47%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           M+TIF AVQCFQCSTMQVKQQR+SGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYADEQ KVDE+LD   VD+D+LD +A+RKRR+DWSEYLD EEDRS+ GREN RELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQN 180
           SDF DGKIVTELPE KTRK  ST CSS  EGGEG  FYRP+F KR HIAKN         
Sbjct: 121 SDFTDGKIVTELPEEKTRKHCSTSCSSRPEGGEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WGSPSAIHTSKWIKG---DDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIE 240
               SAI  SKW KG   DD+ +  KA NLS+               D+I+NWE  SDIE
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKA-NLSSK--------------DEIRNWESQSDIE 240

Query: 241 ASKWSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNR------------ 300
           ASKW SKGMSKDDENA    CILAK  G S KWSEY+TEE+   G  +            
Sbjct: 241 ASKW-SKGMSKDDENA----CILAKVGGPSPKWSEYMTEEDKNMGTEQDMDTLKMIINDE 300

Query: 301 ---ENRAAEEGIDILKMMINDEIVEDDIHPDFK 315
              ++   E+ +D LKM+INDEIVEDDIHPDFK
Sbjct: 301 IVEDDMGTEQDMDTLKMIINDEIVEDDIHPDFK 300

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BLAST of CcUC08G151200 vs. ExPASy Swiss-Prot
Match: Q32PP1 (MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 9.0e-08
Identity = 59/220 (26.82%), Postives = 94/220 (42.73%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           M   F  ++CF C T QV QQ K   KW C VC E+QS+ K F RG  A D R+ VQ  N
Sbjct: 1   MVQEFNVLRCFSCQTFQV-QQVKKAKKWTCKVCGEKQSLIKEFGRG-AAADCRRHVQKLN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDE------LDCSARRKRR--NDWSEYLDPEEDRSERG 120
             R     Q+   +LL  G  +++       LD  + ++    + WS+Y D   +     
Sbjct: 61  ALRG-EQHQLNTQQLLAQGDEENENEDVYEVLDPKSEQEEAHVSRWSKYTDQTTEGPNEE 120

Query: 121 RENARELGSDFIDGKIVTELPEVKTRKSDSTRCSSWSE--GGEGDGFYR-----PIFSKR 180
           +++  E      D  + TE P+ + + +   +  S  E  GG  D +         F K+
Sbjct: 121 KDDEDE------DENVYTERPQFRIQGTRKRKKMSSLEPFGGNCDNYEESRAGYSQFRKQ 180

Query: 181 KHIAKNLSSQDEVQNWGSPSAIHTSKWIKGDDKLIFSKAK 206
            ++   L  +    +W   S    S   + DD +  ++ K
Sbjct: 181 AYLPLQLEKRSS-SSWNKGSVSKYSNCQRPDDVVPSARTK 210

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BLAST of CcUC08G151200 vs. ExPASy TrEMBL
Match: A0A5D3BXL1 (UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00830 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 8.4e-134
Identity = 252/315 (80.00%), Postives = 269/315 (85.40%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIF AVQCFQCSTMQVKQQRKSGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYA+EQ  VD+L+ GG VDDD+LDCS RRKRRNDWSEYLDPEEDRS  GREN  EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQN 180
           SD    KI TELP++KT KS S  CSSWSE GEGDG YRP+FSKRKHIAKNLSSQDE+QN
Sbjct: 121 SDL---KIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIEASK 240
           W SPSAIHTSK  KGDD+  FS AK LSAPF DKKMSKNSHK+  +IQNWELPS+IEASK
Sbjct: 181 WESPSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNRENRAAEEGIDILKMM 300
           W     +KDDEN+RTKSCIL K RG SSKWSEYITEEENCGG N EN A E+G+DILK M
Sbjct: 241 W-----TKDDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-M 300

Query: 301 INDEIVEDDIHPDFK 315
           INDEIVEDDIHPDFK
Sbjct: 301 INDEIVEDDIHPDFK 305

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BLAST of CcUC08G151200 vs. ExPASy TrEMBL
Match: A0A1S3C3H7 (UPF0544 protein C5orf45 homolog OS=Cucumis melo OX=3656 GN=LOC103496578 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 8.4e-134
Identity = 252/315 (80.00%), Postives = 269/315 (85.40%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIF AVQCFQCSTMQVKQQRKSGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYA+EQ  VD+L+ GG VDDD+LDCS RRKRRNDWSEYLDPEEDRS  GREN  EL 
Sbjct: 61  MSRKYANEQANVDDLIHGGIVDDDKLDCSGRRKRRNDWSEYLDPEEDRSHSGRENEGELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQN 180
           SD    KI TELP++KT KS S  CSSWSE GEGDG YRP+FSKRKHIAKNLSSQDE+QN
Sbjct: 121 SDL---KIATELPDIKTWKSGSRSCSSWSE-GEGDGLYRPLFSKRKHIAKNLSSQDEIQN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIEASK 240
           W SPSAIHTSK  KGDD+  FS AK LSAPF DKKMSKNSHK+  +IQNWELPS+IEASK
Sbjct: 181 WESPSAIHTSKLSKGDDEQTFSTAKYLSAPFQDKKMSKNSHKVESEIQNWELPSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNRENRAAEEGIDILKMM 300
           W     +KDDEN+RTKSCIL K RG SSKWSEYITEEENCGG N EN A E+G+DILK M
Sbjct: 241 W-----TKDDENSRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREQGMDILK-M 300

Query: 301 INDEIVEDDIHPDFK 315
           INDEIVEDDIHPDFK
Sbjct: 301 INDEIVEDDIHPDFK 305

[Close]

BLAST of CcUC08G151200 vs. ExPASy TrEMBL
Match: A0A0A0KCJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 6.0e-132
Identity = 245/315 (77.78%), Postives = 264/315 (83.81%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           MATIF AVQCFQCSTMQVKQQRKSGNKWICAVCN++QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MATIFIAVQCFQCSTMQVKQQRKSGNKWICAVCNQKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYA+EQ  VDEL+DGG VDDD+L CS RRK R+DWS+YLDP EDRS  GREN  EL 
Sbjct: 61  MSRKYANEQANVDELIDGGIVDDDKLVCSGRRKSRSDWSDYLDPVEDRSHSGRENEVELE 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQN 180
           SD    KIVTELP++KT KS S  CSSWSE GEGDG YRP+FSKRKHIA NLSSQDE++N
Sbjct: 121 SDL---KIVTELPDIKTWKSGSRSCSSWSEEGEGDGLYRPLFSKRKHIANNLSSQDEIRN 180

Query: 181 WGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIEASK 240
           W SPSAIH SK  KGDD+   S AK LSAPF DKKM KN HK+ D+IQNWELPS+IEASK
Sbjct: 181 WESPSAIHASKLSKGDDEQTLSTAKYLSAPFQDKKMGKNGHKVEDEIQNWELPSEIEASK 240

Query: 241 WSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNRENRAAEEGIDILKMM 300
           W     SKDDEN RTKSCIL K RG SSKWSEYITEEENCGG N EN A EEG+D+LKMM
Sbjct: 241 W-----SKDDENLRTKSCILGKVRGASSKWSEYITEEENCGGRNEENMAREEGMDVLKMM 300

Query: 301 INDEIVEDDIHPDFK 315
           IN+EIVEDDIHPDFK
Sbjct: 301 INEEIVEDDIHPDFK 307

[Close]

BLAST of CcUC08G151200 vs. ExPASy TrEMBL
Match: A0A6J1FH51 (MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445345 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.8e-97
Identity = 206/318 (64.78%), Postives = 228/318 (71.70%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           M+TIF AVQCFQCSTMQVKQQR+SGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYADEQ KVDE+LD   VD+D+LD +A+RKRR+DWSEYLD EEDRS+ GREN RELG
Sbjct: 61  MSRKYADEQTKVDEILDEEIVDEDQLDFNAKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQN 180
           SDF DGK VTELPE KTRK  ST CSS  EG EG  FYRP+F KR HIAKN         
Sbjct: 121 SDFADGKFVTELPEEKTRKHCSTSCSSRPEGVEGKRFYRPVFPKRTHIAKN--------- 180

Query: 181 WGSPSAIHTSKWIKG---DDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIE 240
               SAI  SKW KG   DD+ +  KAK+     L  K         D+I+NWE PS   
Sbjct: 181 ----SAIQASKWRKGVREDDEKVSLKAKH----HLSSK---------DEIRNWESPS--- 240

Query: 241 ASKWSSKGMSKDDENARTKSCILAKARG-SSKWSEYITEEENCGGGNRENRAAEEGIDIL 300
                    SKDDE+A    CILAK  G SSKWSEYITE++NCGG   EN   E+ +D L
Sbjct: 241 ---------SKDDESA----CILAKVGGPSSKWSEYITEDDNCGGRKGENMGTEQDMDTL 276

Query: 301 KMMINDEIVEDDIHPDFK 315
           KM+ NDEIVEDDIHPDFK
Sbjct: 301 KMITNDEIVEDDIHPDFK 276

[Close]

BLAST of CcUC08G151200 vs. ExPASy TrEMBL
Match: A0A6J1JWE4 (MRN complex-interacting protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488952 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 5.0e-94
Identity = 199/317 (62.78%), Postives = 223/317 (70.35%), Query Frame = 0


Query: 1   MATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFN 60
           M+TIF AVQCFQCSTMQVKQQR+SGNKWICAVCNE+QSVQKVFAR PMAKDVRKFVQSFN
Sbjct: 1   MSTIFIAVQCFQCSTMQVKQQRRSGNKWICAVCNEKQSVQKVFARAPMAKDVRKFVQSFN 60

Query: 61  MSRKYADEQMKVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 120
           MSRKYADEQ KVDE+ D   VD+D+LD + +RKRR+DWSEYLD EEDRS+ GREN RELG
Sbjct: 61  MSRKYADEQTKVDEIFDEEIVDEDQLDFNEKRKRRSDWSEYLDLEEDRSQTGRENERELG 120

Query: 121 SDFIDGKIVTELPEVKTRKSDSTRCSSWSEGGEGDGFYRPIFSKRKHIAKNLSSQDEVQN 180
           SDF DGKIVTELPE KTRK  ST CS+  E GEG  FYRP+F KR HIAKN         
Sbjct: 121 SDFADGKIVTELPEEKTRKHCSTSCSNRPESGEGKIFYRPVFPKRTHIAKN--------- 180

Query: 181 WGSPSAIHTSKWIKG---DDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWELPSDIE 240
               SAI  SKW KG   DD+ +  KAK+     L  K         D+I+NWE  S   
Sbjct: 181 ----SAIQASKWSKGVREDDEKVSLKAKH----HLSSK---------DEIRNWESLS--- 240

Query: 241 ASKWSSKGMSKDDENARTKSCILAKARGSSKWSEYITEEENCGGGNRENRAAEEGIDILK 300
                    +KDDENA       +K  G SKWSEYITE++NCGG   EN   E+ +D LK
Sbjct: 241 ---------TKDDENA------CSKVGGPSKWSEYITEDDNCGGRKGENMGTEQDMDTLK 273

Query: 301 MMINDEIVEDDIHPDFK 315
           M+INDEIVEDDIHPDFK
Sbjct: 301 MIINDEIVEDDIHPDFK 273

[Close]

BLAST of CcUC08G151200 vs. TAIR 10
Match: AT1G71760.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, embryo, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 84 Blast hits to 84 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-29
Identity = 103/327 (31.50%), Postives = 163/327 (49.85%), Query Frame = 0


Query: 2   ATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFNM 61
           +T+F A+QC++CSTMQVKQ++KS NKW+C +CN++QSV+KVFA+G  AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 62  SRKYADEQM-KVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 121
           SRK ADE+   V +      V+ +  +     K+R+DWS+YLD +         + R L 
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEEVNGTKKRSDWSQYLDFD------SVNDRRRLA 122

Query: 122 SDFIDGKIVTELP-----EVKTRKSDSTRCSSWSEGGE---GDGFYRPIFSKRKHIAKNL 181
            +  D KIVTE+P       K  K  +   SS + GGE    +  ++P FS+R       
Sbjct: 123 GEEDDVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRRS------ 182

Query: 182 SSQDEVQNWGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKI---GDDIQN 241
                               IK  D   F   K  SA ++    + +S+++     D++ 
Sbjct: 183 --------------------IKKPD---FRSGKRSSATYVGHISAFSSNEVVTRKKDMEE 242

Query: 242 WELPSD---IEASKWSSKGMSKDDENARTKSCILAKARGSSKWSEYITEEENCGGGNREN 301
             L S+     ASKW +  +  + E+       + KA           +++  GG +R  
Sbjct: 243 RNLESERVTKPASKWDAYLIDDEGEHQAPPRFGVKKA----------LKDDEVGGWDRA- 275

Query: 302 RAAEEGIDILKMMINDEIVEDDIHPDF 314
                   ++++    +IV+D++HPDF
Sbjct: 303 --------VMEINTEYQIVDDEVHPDF 275

[Close]

BLAST of CcUC08G151200 vs. TAIR 10
Match: AT1G71760.1 (unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bacteria - 0; Metazoa - 44; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 1.2e-28
Identity = 102/321 (31.78%), Postives = 154/321 (47.98%), Query Frame = 0


Query: 2   ATIFTAVQCFQCSTMQVKQQRKSGNKWICAVCNERQSVQKVFARGPMAKDVRKFVQSFNM 61
           +T+F A+QC++CSTMQVKQ++KS NKW+C +CN++QSV+KVFA+G  AK++R FVQSFNM
Sbjct: 3   STLFIALQCYECSTMQVKQKKKSSNKWVCVICNQKQSVKKVFAQGYKAKELRFFVQSFNM 62

Query: 62  SRKYADEQM-KVDELLDGGTVDDDELDCSARRKRRNDWSEYLDPEEDRSERGRENARELG 121
           SRK ADE+   V +      V+ +  +     K+R+DWS+YLD +         + R L 
Sbjct: 63  SRKVADEEAHAVGDSFPEVYVEGEVNEEVNGTKKRSDWSQYLDFD------SVNDRRRLA 122

Query: 122 SDFIDGKIVTELP-----EVKTRKSDSTRCSSWSEGGE---GDGFYRPIFSKRKHIAKNL 181
            +  D KIVTE+P       K  K  +   SS + GGE    +  ++P FS+R     + 
Sbjct: 123 GEEDDVKIVTEMPSNMFKRPKLNKESNAGGSSSNTGGENKDSNEIFKPSFSRRSIKKPDF 182

Query: 182 SSQDEVQNWGSPSAIHTSKWIKGDDKLIFSKAKNLSAPFLDKKMSKNSHKIGDDIQNWEL 241
            S + V               K D      + +NL +  + K  SK    + DD    + 
Sbjct: 183 RSDEVVTR-------------KKD-----MEERNLESERVTKPASKWDAYLIDDEGEHQA 242

Query: 242 PSDIEASKWSSKGMSKDDENARTKSCILAKARGSSKWSEYITEEENCGGGNRENRAAEEG 301
           P      ++  K   KDDE                            GG +R        
Sbjct: 243 P-----PRFGVKKALKDDE---------------------------VGGWDRA------- 258

Query: 302 IDILKMMINDEIVEDDIHPDF 314
             ++++    +IV+D++HPDF
Sbjct: 303 --VMEINTEYQIVDDEVHPDF 258

The following BLAST results are available for this feature:

BLAST of CcUC08G151200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885326.1	2.7e-134	80.00	MRN complex-interacting protein [Benincasa hispida]	[more]
XP_008456719.1	1.7e-133	80.00	PREDICTED: UPF0544 protein C5orf45 homolog [Cucumis melo] >KAA0031637.1 UPF0544 ...	[more]
XP_004141004.1	1.2e-131	77.78	MRN complex-interacting protein [Cucumis sativus] >KGN46102.1 hypothetical prote...	[more]
XP_023549686.1	6.7e-101	67.30	MRN complex-interacting protein isoform X2 [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_023549685.1	2.8e-99	64.26	MRN complex-interacting protein isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC08G151200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q32PP1	9.0e-08	26.82	MRN complex-interacting protein OS=Danio rerio OX=7955 GN=mrnip PE=2 SV=1	[more]

BLAST of CcUC08G151200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BXL1	8.4e-134	80.00	UPF0544 protein C5orf45-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C3H7	8.4e-134	80.00	UPF0544 protein C5orf45 homolog OS=Cucumis melo OX=3656 GN=LOC103496578 PE=4 SV=...	[more]
A0A0A0KCJ3	6.0e-132	77.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052770 PE=4 SV=1	[more]
A0A6J1FH51	4.8e-97	64.78	MRN complex-interacting protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JWE4	5.0e-94	62.78	MRN complex-interacting protein isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CcUC08G151200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71760.2	2.5e-29	31.50	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G71760.1	1.2e-28	31.78	unknown protein; Has 92 Blast hits to 92 proteins in 41 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032739	MRN complex-interacting protein	PFAM	PF15749	MRNIP	coord: 8..150 e-value: 1.7E-20 score: 73.7
IPR032739	MRN complex-interacting protein	PANTHER	PTHR15863	MRN COMPLEX-INTERACTING PROTEIN	coord: 1..313

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G151200.1	CcUC08G151200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007095	mitotic G2 DNA damage checkpoint signaling
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding