CcUC08G150370 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAACCCTAGAGCATTCATCCACCTTTTATTCCCTGAGTCCATTCGCTCCACACTCACAGGAGCCACAGGGAGCGGGTGGTCTGTGACCTATGATTGCTTCCTCTTCAGCGCCTACCTCCACACCCTATTCCCCGGCCGTGTGACCGCCACGAATGGCTTCCTCATCCGCCTCCAACTCTCCCACCTTCTCAAACCTCTCTACATTCCACACTCTTCCTTTTTCTTGGACTCCTCCACCCAACTCCTCCTCCTCCCTCCCTCCTACTTCTCCTCCTACTCCGCTGCTCTAAACTTCGTCCTCTACACCCTCTCCCACCTCAGCGTCCCCGACTCCAACCCCGACCCTCTTGCTCGTCTCATCTTTTCCTTCGCCAACTGCCATCACCTCTCCGCCACCAAATCCCTCGTCCCATTGTACATCTCTTTCACCTCCACCACTGTCCTCCGCAACCACATCGAGGCTGCCGACTGGGTCTATGGTGGCGCCCCTGAGTCCCAAGTGGTGAGGACATTGAGAATGACGTTTGAGTCCCTGAGAAGGCTGAAAGATGAGAGTTTTGATGGATCGTGCTTAATGAAGAGTTGTTGTAAAGAGGAGGAGGAGGAGAAGTGTATGGTGTGCTTGGAAGGGTTTGAAGAGGAAACGAATACAAAGTGTAGTGTAAGTCAGCTCTCGTGTTCTCATGTGTTTCATTTTCGGTGCGTTTCTCAATGGCTTAGTTTGGATCATCGTTGCCCGGTATGCCGCTCTCCCATGCCCTGGGTTCATGCCTTCTTCCCCGACGCCGACGTCGACGCACGTTCTTCCTTTTCACATAATTCCACTGCCACCTCTTATCTTGATCTCGACGACGACGTTGATAACGATGACGATGAAAGTAATAATTTCGTTGATAATCCATGCTAG ATGTTGAACCCTAGAGCATTCATCCACCTTTTATTCCCTGAGTCCATTCGCTCCACACTCACAGGAGCCACAGGGAGCGGGTGGTCTGTGACCTATGATTGCTTCCTCTTCAGCGCCTACCTCCACACCCTATTCCCCGGCCGTGTGACCGCCACGAATGGCTTCCTCATCCGCCTCCAACTCTCCCACCTTCTCAAACCTCTCTACATTCCACACTCTTCCTTTTTCTTGGACTCCTCCACCCAACTCCTCCTCCTCCCTCCCTCCTACTTCTCCTCCTACTCCGCTGCTCTAAACTTCGTCCTCTACACCCTCTCCCACCTCAGCGTCCCCGACTCCAACCCCGACCCTCTTGCTCGTCTCATCTTTTCCTTCGCCAACTGCCATCACCTCTCCGCCACCAAATCCCTCGTCCCATTGTACATCTCTTTCACCTCCACCACTGTCCTCCGCAACCACATCGAGGCTGCCGACTGGGTCTATGGTGGCGCCCCTGAGTCCCAAGTGGTGAGGACATTGAGAATGACGTTTGAGTCCCTGAGAAGGCTGAAAGATGAGAGTTTTGATGGATCGTGCTTAATGAAGAGTTGTTGTAAAGAGGAGGAGGAGGAGAAGTGTATGGTGTGCTTGGAAGGGTTTGAAGAGGAAACGAATACAAAGTGTAGTGTAAGTCAGCTCTCGTGTTCTCATGTGTTTCATTTTCGGTGCGTTTCTCAATGGCTTAGTTTGGATCATCGTTGCCCGGTATGCCGCTCTCCCATGCCCTGGGTTCATGCCTTCTTCCCCGACGCCGACGTCGACGCACGTTCTTCCTTTTCACATAATTCCACTGCCACCTCTTATCTTGATCTCGACGACGACGTTGATAACGATGACGATGAAAGTAATAATTTCGTTGATAATCCATGCTAG ATGTTGAACCCTAGAGCATTCATCCACCTTTTATTCCCTGAGTCCATTCGCTCCACACTCACAGGAGCCACAGGGAGCGGGTGGTCTGTGACCTATGATTGCTTCCTCTTCAGCGCCTACCTCCACACCCTATTCCCCGGCCGTGTGACCGCCACGAATGGCTTCCTCATCCGCCTCCAACTCTCCCACCTTCTCAAACCTCTCTACATTCCACACTCTTCCTTTTTCTTGGACTCCTCCACCCAACTCCTCCTCCTCCCTCCCTCCTACTTCTCCTCCTACTCCGCTGCTCTAAACTTCGTCCTCTACACCCTCTCCCACCTCAGCGTCCCCGACTCCAACCCCGACCCTCTTGCTCGTCTCATCTTTTCCTTCGCCAACTGCCATCACCTCTCCGCCACCAAATCCCTCGTCCCATTGTACATCTCTTTCACCTCCACCACTGTCCTCCGCAACCACATCGAGGCTGCCGACTGGGTCTATGGTGGCGCCCCTGAGTCCCAAGTGGTGAGGACATTGAGAATGACGTTTGAGTCCCTGAGAAGGCTGAAAGATGAGAGTTTTGATGGATCGTGCTTAATGAAGAGTTGTTGTAAAGAGGAGGAGGAGGAGAAGTGTATGGTGTGCTTGGAAGGGTTTGAAGAGGAAACGAATACAAAGTGTAGTGTAAGTCAGCTCTCGTGTTCTCATGTGTTTCATTTTCGGTGCGTTTCTCAATGGCTTAGTTTGGATCATCGTTGCCCGGTATGCCGCTCTCCCATGCCCTGGGTTCATGCCTTCTTCCCCGACGCCGACGTCGACGCACGTTCTTCCTTTTCACATAATTCCACTGCCACCTCTTATCTTGATCTCGACGACGACGTTGATAACGATGACGATGAAAGTAATAATTTCGTTGATAATCCATGCTAG MLNPRAFIHLLFPESIRSTLTGATGSGWSVTYDCFLFSAYLHTLFPGRVTATNGFLIRLQLSHLLKPLYIPHSSFFLDSSTQLLLLPPSYFSSYSAALNFVLYTLSHLSVPDSNPDPLARLIFSFANCHHLSATKSLVPLYISFTSTTVLRNHIEAADWVYGGAPESQVVRTLRMTFESLRRLKDESFDGSCLMKSCCKEEEEEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMPWVHAFFPDADVDARSSFSHNSTATSYLDLDDDVDNDDDESNNFVDNPC Homology
BLAST of CcUC08G150370 vs. NCBI nr
Match: XP_004292643.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 71.6 bits (174), Expect = 1.3e-08 Identity = 43/173 (24.86%), Postives = 86/173 (49.71%), Query Frame = 0
BLAST of CcUC08G150370 vs. NCBI nr
Match: XP_038975401.1 (E3 ubiquitin-protein ligase Praja-1-like [Phoenix dactylifera]) HSP 1 Score: 70.5 bits (171), Expect = 2.9e-08 Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 0
BLAST of CcUC08G150370 vs. NCBI nr
Match: KAB2603827.1 (nuclear ribonuclease Z-like [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 69.3 bits (168), Expect = 6.4e-08 Identity = 42/163 (25.77%), Postives = 77/163 (47.24%), Query Frame = 0
BLAST of CcUC08G150370 vs. NCBI nr
Match: XP_020217801.1 (E3 ubiquitin-protein ligase SIRP1 [Cajanus cajan] >KYP76265.1 E3 ubiquitin-protein ligase RNF181 [Cajanus cajan]) HSP 1 Score: 68.6 bits (166), Expect = 1.1e-07 Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0
BLAST of CcUC08G150370 vs. NCBI nr
Match: KAE8022191.1 (hypothetical protein FH972_008015 [Carpinus fangiana]) HSP 1 Score: 67.4 bits (163), Expect = 2.4e-07 Identity = 47/168 (27.98%), Postives = 81/168 (48.21%), Query Frame = 0
BLAST of CcUC08G150370 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06 Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 0
BLAST of CcUC08G150370 vs. ExPASy Swiss-Prot
Match: Q5UQ40 (Probable bifunctional E2/E3 enzyme R795 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R795 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06 Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of CcUC08G150370 vs. ExPASy Swiss-Prot
Match: Q8GYT9 (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV=2) HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06 Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 0
BLAST of CcUC08G150370 vs. ExPASy Swiss-Prot
Match: Q90ZT7 (E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis OX=8355 GN=rnf111-a PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.8e-06 Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of CcUC08G150370 vs. ExPASy Swiss-Prot
Match: Q6NRV8 (E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis OX=8355 GN=rnf111-b PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.8e-06 Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0
BLAST of CcUC08G150370 vs. ExPASy TrEMBL
Match: A0A5N5FLS4 (Nuclear ribonuclease Z-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_037758 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.1e-08 Identity = 42/163 (25.77%), Postives = 77/163 (47.24%), Query Frame = 0
BLAST of CcUC08G150370 vs. ExPASy TrEMBL
Match: A0A151UAC1 (E3 ubiquitin-protein ligase RNF181 OS=Cajanus cajan OX=3821 GN=KK1_020498 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.3e-08 Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0
BLAST of CcUC08G150370 vs. ExPASy TrEMBL
Match: A0A5N6R0F2 (RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_008015 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-07 Identity = 47/168 (27.98%), Postives = 81/168 (48.21%), Query Frame = 0
BLAST of CcUC08G150370 vs. ExPASy TrEMBL
Match: A0A1R3IHY3 (Zinc finger, RING-type OS=Corchorus olitorius OX=93759 GN=COLO4_23206 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-07 Identity = 45/170 (26.47%), Postives = 81/170 (47.65%), Query Frame = 0
BLAST of CcUC08G150370 vs. ExPASy TrEMBL
Match: A0A7J6I110 (RING-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_002435 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-07 Identity = 59/198 (29.80%), Postives = 89/198 (44.95%), Query Frame = 0
BLAST of CcUC08G150370 vs. TAIR 10
Match: AT1G74620.1 (RING/U-box superfamily protein ) HSP 1 Score: 57.8 bits (138), Expect = 1.8e-08 Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 0
BLAST of CcUC08G150370 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein ) HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07 Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 0
BLAST of CcUC08G150370 vs. TAIR 10
Match: AT3G47990.1 (SUGAR-INSENSITIVE 3 ) HSP 1 Score: 54.3 bits (129), Expect = 2.0e-07 Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 0
BLAST of CcUC08G150370 vs. TAIR 10
Match: AT1G17970.1 (RING/U-box superfamily protein ) HSP 1 Score: 52.0 bits (123), Expect = 9.8e-07 Identity = 21/49 (42.86%), Postives = 29/49 (59.18%), Query Frame = 0
BLAST of CcUC08G150370 vs. TAIR 10
Match: AT4G26580.1 (RING/U-box superfamily protein ) HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06 Identity = 26/74 (35.14%), Postives = 40/74 (54.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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