CcUC08G150370 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G150370
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING-type domain-containing protein
LocationCicolChr08: 18450805 .. 18451716 (-)
RNA-Seq ExpressionCcUC08G150370
SyntenyCcUC08G150370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAACCCTAGAGCATTCATCCACCTTTTATTCCCTGAGTCCATTCGCTCCACACTCACAGGAGCCACAGGGAGCGGGTGGTCTGTGACCTATGATTGCTTCCTCTTCAGCGCCTACCTCCACACCCTATTCCCCGGCCGTGTGACCGCCACGAATGGCTTCCTCATCCGCCTCCAACTCTCCCACCTTCTCAAACCTCTCTACATTCCACACTCTTCCTTTTTCTTGGACTCCTCCACCCAACTCCTCCTCCTCCCTCCCTCCTACTTCTCCTCCTACTCCGCTGCTCTAAACTTCGTCCTCTACACCCTCTCCCACCTCAGCGTCCCCGACTCCAACCCCGACCCTCTTGCTCGTCTCATCTTTTCCTTCGCCAACTGCCATCACCTCTCCGCCACCAAATCCCTCGTCCCATTGTACATCTCTTTCACCTCCACCACTGTCCTCCGCAACCACATCGAGGCTGCCGACTGGGTCTATGGTGGCGCCCCTGAGTCCCAAGTGGTGAGGACATTGAGAATGACGTTTGAGTCCCTGAGAAGGCTGAAAGATGAGAGTTTTGATGGATCGTGCTTAATGAAGAGTTGTTGTAAAGAGGAGGAGGAGGAGAAGTGTATGGTGTGCTTGGAAGGGTTTGAAGAGGAAACGAATACAAAGTGTAGTGTAAGTCAGCTCTCGTGTTCTCATGTGTTTCATTTTCGGTGCGTTTCTCAATGGCTTAGTTTGGATCATCGTTGCCCGGTATGCCGCTCTCCCATGCCCTGGGTTCATGCCTTCTTCCCCGACGCCGACGTCGACGCACGTTCTTCCTTTTCACATAATTCCACTGCCACCTCTTATCTTGATCTCGACGACGACGTTGATAACGATGACGATGAAAGTAATAATTTCGTTGATAATCCATGCTAG

mRNA sequence

ATGTTGAACCCTAGAGCATTCATCCACCTTTTATTCCCTGAGTCCATTCGCTCCACACTCACAGGAGCCACAGGGAGCGGGTGGTCTGTGACCTATGATTGCTTCCTCTTCAGCGCCTACCTCCACACCCTATTCCCCGGCCGTGTGACCGCCACGAATGGCTTCCTCATCCGCCTCCAACTCTCCCACCTTCTCAAACCTCTCTACATTCCACACTCTTCCTTTTTCTTGGACTCCTCCACCCAACTCCTCCTCCTCCCTCCCTCCTACTTCTCCTCCTACTCCGCTGCTCTAAACTTCGTCCTCTACACCCTCTCCCACCTCAGCGTCCCCGACTCCAACCCCGACCCTCTTGCTCGTCTCATCTTTTCCTTCGCCAACTGCCATCACCTCTCCGCCACCAAATCCCTCGTCCCATTGTACATCTCTTTCACCTCCACCACTGTCCTCCGCAACCACATCGAGGCTGCCGACTGGGTCTATGGTGGCGCCCCTGAGTCCCAAGTGGTGAGGACATTGAGAATGACGTTTGAGTCCCTGAGAAGGCTGAAAGATGAGAGTTTTGATGGATCGTGCTTAATGAAGAGTTGTTGTAAAGAGGAGGAGGAGGAGAAGTGTATGGTGTGCTTGGAAGGGTTTGAAGAGGAAACGAATACAAAGTGTAGTGTAAGTCAGCTCTCGTGTTCTCATGTGTTTCATTTTCGGTGCGTTTCTCAATGGCTTAGTTTGGATCATCGTTGCCCGGTATGCCGCTCTCCCATGCCCTGGGTTCATGCCTTCTTCCCCGACGCCGACGTCGACGCACGTTCTTCCTTTTCACATAATTCCACTGCCACCTCTTATCTTGATCTCGACGACGACGTTGATAACGATGACGATGAAAGTAATAATTTCGTTGATAATCCATGCTAG

Coding sequence (CDS)

ATGTTGAACCCTAGAGCATTCATCCACCTTTTATTCCCTGAGTCCATTCGCTCCACACTCACAGGAGCCACAGGGAGCGGGTGGTCTGTGACCTATGATTGCTTCCTCTTCAGCGCCTACCTCCACACCCTATTCCCCGGCCGTGTGACCGCCACGAATGGCTTCCTCATCCGCCTCCAACTCTCCCACCTTCTCAAACCTCTCTACATTCCACACTCTTCCTTTTTCTTGGACTCCTCCACCCAACTCCTCCTCCTCCCTCCCTCCTACTTCTCCTCCTACTCCGCTGCTCTAAACTTCGTCCTCTACACCCTCTCCCACCTCAGCGTCCCCGACTCCAACCCCGACCCTCTTGCTCGTCTCATCTTTTCCTTCGCCAACTGCCATCACCTCTCCGCCACCAAATCCCTCGTCCCATTGTACATCTCTTTCACCTCCACCACTGTCCTCCGCAACCACATCGAGGCTGCCGACTGGGTCTATGGTGGCGCCCCTGAGTCCCAAGTGGTGAGGACATTGAGAATGACGTTTGAGTCCCTGAGAAGGCTGAAAGATGAGAGTTTTGATGGATCGTGCTTAATGAAGAGTTGTTGTAAAGAGGAGGAGGAGGAGAAGTGTATGGTGTGCTTGGAAGGGTTTGAAGAGGAAACGAATACAAAGTGTAGTGTAAGTCAGCTCTCGTGTTCTCATGTGTTTCATTTTCGGTGCGTTTCTCAATGGCTTAGTTTGGATCATCGTTGCCCGGTATGCCGCTCTCCCATGCCCTGGGTTCATGCCTTCTTCCCCGACGCCGACGTCGACGCACGTTCTTCCTTTTCACATAATTCCACTGCCACCTCTTATCTTGATCTCGACGACGACGTTGATAACGATGACGATGAAAGTAATAATTTCGTTGATAATCCATGCTAG

Protein sequence

MLNPRAFIHLLFPESIRSTLTGATGSGWSVTYDCFLFSAYLHTLFPGRVTATNGFLIRLQLSHLLKPLYIPHSSFFLDSSTQLLLLPPSYFSSYSAALNFVLYTLSHLSVPDSNPDPLARLIFSFANCHHLSATKSLVPLYISFTSTTVLRNHIEAADWVYGGAPESQVVRTLRMTFESLRRLKDESFDGSCLMKSCCKEEEEEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMPWVHAFFPDADVDARSSFSHNSTATSYLDLDDDVDNDDDESNNFVDNPC
Homology
BLAST of CcUC08G150370 vs. NCBI nr
Match: XP_004292643.1 (PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-08
Identity = 43/173 (24.86%), Postives = 86/173 (49.71%), Query Frame = 0

Query: 105 LSHLSVPDSNPDPLARLIFSFANCHHLSATKSLVPLYISFTSTTVLRNHIEAA-DWVYGG 164
           LS + VP+S    + R IF   +   ++    ++ + IS  +T    N+   A D V   
Sbjct: 25  LSGMGVPESEWSYIFRRIFRVVD---VAVPNVVIDVTISDVTTITYDNYARTAEDMVVSE 84

Query: 165 APE---SQVVRTLRMTFESLRRLKDESFDGSCLMKSCC--KEEEEEKCMVCLEGFEEETN 224
           + E   ++++   + + E L +++ ++ +G  + + C   K+   + C++CL+  +    
Sbjct: 85  SLERYRAKLIPATKSSIEGLEKVRVDNLEGEEVEQQCSRPKKRSRQSCVICLDPLDAART 144

Query: 225 T---------KCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMPWVHAFFP 263
           T         + ++++L CSH++H  C+  WL ++H CP+CR PMP V    P
Sbjct: 145 TEEQDSCAEQEVTINRLPCSHLYHGECIVMWLKINHMCPMCRYPMPTVEEAKP 194

BLAST of CcUC08G150370 vs. NCBI nr
Match: XP_038975401.1 (E3 ubiquitin-protein ligase Praja-1-like [Phoenix dactylifera])

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-08
Identity = 28/51 (54.90%), Postives = 38/51 (74.51%), Query Frame = 0

Query: 203 EEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSP 254
           +E+C++CLE F    NT+  VSQ+SCSH+FH RC++QWL   H CP+CR P
Sbjct: 202 QEECVICLEEF----NTEAKVSQMSCSHLFHSRCIAQWLERSHLCPLCRCP 248

BLAST of CcUC08G150370 vs. NCBI nr
Match: KAB2603827.1 (nuclear ribonuclease Z-like [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 69.3 bits (168), Expect = 6.4e-08
Identity = 42/163 (25.77%), Postives = 77/163 (47.24%), Query Frame = 0

Query: 105 LSHLSVPDSNPDPLARLIF------SFANCHHLSATKSLVPLYISFTSTTVLRNHI---- 164
           LS + VP+     +   +F      S +N  + + T +++P+++      +L + +    
Sbjct: 85  LSSMLVPEHEHPAITEEVFHKLAGLSSSNLGNANNT-TMLPIFVGIIDANLLMHSVGSDP 144

Query: 165 --EAADWVYGGAPESQVVRTLRMTFESLRRLKDESFDGSCLMKSCCKEEEEEKCMVCLEG 224
               ADWV   + ++   R +     S+  L+   F      +   +E+++  C++C+E 
Sbjct: 145 ITSLADWVAMSSMQTYEARPIPADESSIENLEKVIFG-----EEGTREKQQTSCVICMED 204

Query: 225 FEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMP 256
           FE+       VS+L C H +H  C+ QWL   H CP+CR PMP
Sbjct: 205 FEDGV----QVSRLPCLHFYHEDCIGQWLKTSHLCPLCRYPMP 237

BLAST of CcUC08G150370 vs. NCBI nr
Match: XP_020217801.1 (E3 ubiquitin-protein ligase SIRP1 [Cajanus cajan] >KYP76265.1 E3 ubiquitin-protein ligase RNF181 [Cajanus cajan])

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-07
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0

Query: 168 QVVRTLRMTFESLRRLKDESFDGSCLMKSCCKEEEEEKCMVCLEGFEEETNTKCSVSQLS 227
           Q VR +  + E++  LK  + D S L        + EKC +C++ F++E     S+  + 
Sbjct: 163 QGVRMVPASKEAIESLKAFTVDSSFL--------KIEKCNICMDKFQDEYGNSLSLLSMP 222

Query: 228 CSHVFHFRCVSQWLSLDHRCPVCRSPMP 256
           C+HVFH  C+ +WL   H CP+CR PMP
Sbjct: 223 CNHVFHGHCIVKWLQTSHMCPLCRYPMP 242

BLAST of CcUC08G150370 vs. NCBI nr
Match: KAE8022191.1 (hypothetical protein FH972_008015 [Carpinus fangiana])

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-07
Identity = 47/168 (27.98%), Postives = 81/168 (48.21%), Query Frame = 0

Query: 101 VLYTLSHLSVPDSNPDPLARLIFSFANCHHLSATKSLVPLYISFTSTTVL----RNHIEA 160
           +L  LS +  P  + + ++R I S A    +    S  P+ ++F  TT++     +  E+
Sbjct: 92  MLSLLSDVGAPAEHQEAVSRDISSAAAARSVGMGTS--PIVVTFQHTTLVVVEDDDDDES 151

Query: 161 ADWVYGGAPES---QVVRTLRMTFESLRRLKDESFDGSCLMKSCCKEEEEEKCMVCLEGF 220
            D +  G  ES    V R +  T  ++  L+  +F+           +   +C++C E F
Sbjct: 152 DDMMDMGLRESMAVDVARPIPATRSAIEGLEKVTFEDGL--------QSIGQCIICTEEF 211

Query: 221 EEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMPWVHAFF 262
           E        +++L CSHV+H  C+ +WL   HRCP+CR P+P+V   F
Sbjct: 212 E----GGLELTRLPCSHVYHGDCIVKWLEKSHRCPLCRYPLPYVRLIF 245

BLAST of CcUC08G150370 vs. ExPASy Swiss-Prot
Match: Q9SRM0 (RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06
Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 0

Query: 199 KEEEEEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCR 252
           +EEEE++C +CL GFEE    K       CSH +H  CV +WL  +  CP+CR
Sbjct: 100 EEEEEKECCICLGGFEEGEKMKVLP---PCSHCYHCECVDRWLKTESSCPLCR 149

BLAST of CcUC08G150370 vs. ExPASy Swiss-Prot
Match: Q5UQ40 (Probable bifunctional E2/E3 enzyme R795 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R795 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.1e-06
Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0

Query: 182 RLKDESFDGSCLMKSCCKEEEEEKCMVCLEGFEEETNTKCSVSQ-LSCSHVFHFRCVSQW 241
           +L D + + SC   + C+ +E E    C+E    E+NTKC ++Q +SCSH FH  C+S+W
Sbjct: 64  KLVDTTENSSC---AICRYQENEP---CIEHKSSESNTKCPIAQSVSCSHSFHACCISRW 123

Query: 242 LSLDHRCPVC 251
           L     CP+C
Sbjct: 124 LHTKKTCPLC 127

BLAST of CcUC08G150370 vs. ExPASy Swiss-Prot
Match: Q8GYT9 (E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV=2)

HSP 1 Score: 54.3 bits (129), Expect = 2.8e-06
Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 0

Query: 205 KCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMPWVHAFFPDA 264
           +C++CLE F    +    V  L C+H FH  C+ QWL L+ +CP CR       + FPD 
Sbjct: 234 ECLICLEEF----HIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRC------SVFPDL 293

Query: 265 DVDARSSFSHNST 278
           D+ A S+   + T
Sbjct: 294 DLSALSNLQSSGT 296

BLAST of CcUC08G150370 vs. ExPASy Swiss-Prot
Match: Q90ZT7 (E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis OX=8355 GN=rnf111-a PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.8e-06
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0

Query: 199 KEEEEEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCR 252
           +E+ EEKC +CL   EE  +    V +L C H+FH  CV QWL  + +CP+CR
Sbjct: 864 EEDTEEKCTICLSILEEGED----VRRLPCMHLFHQVCVDQWLITNKKCPICR 912

BLAST of CcUC08G150370 vs. ExPASy Swiss-Prot
Match: Q6NRV8 (E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis OX=8355 GN=rnf111-b PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.8e-06
Identity = 24/53 (45.28%), Postives = 33/53 (62.26%), Query Frame = 0

Query: 199 KEEEEEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCR 252
           +E+ EEKC +CL   EE  +    V +L C H+FH  CV QWL  + +CP+CR
Sbjct: 900 EEDTEEKCTICLSILEEGED----VRRLPCMHLFHQVCVDQWLITNKKCPICR 948

BLAST of CcUC08G150370 vs. ExPASy TrEMBL
Match: A0A5N5FLS4 (Nuclear ribonuclease Z-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_037758 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.1e-08
Identity = 42/163 (25.77%), Postives = 77/163 (47.24%), Query Frame = 0

Query: 105 LSHLSVPDSNPDPLARLIF------SFANCHHLSATKSLVPLYISFTSTTVLRNHI---- 164
           LS + VP+     +   +F      S +N  + + T +++P+++      +L + +    
Sbjct: 85  LSSMLVPEHEHPAITEEVFHKLAGLSSSNLGNANNT-TMLPIFVGIIDANLLMHSVGSDP 144

Query: 165 --EAADWVYGGAPESQVVRTLRMTFESLRRLKDESFDGSCLMKSCCKEEEEEKCMVCLEG 224
               ADWV   + ++   R +     S+  L+   F      +   +E+++  C++C+E 
Sbjct: 145 ITSLADWVAMSSMQTYEARPIPADESSIENLEKVIFG-----EEGTREKQQTSCVICMED 204

Query: 225 FEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMP 256
           FE+       VS+L C H +H  C+ QWL   H CP+CR PMP
Sbjct: 205 FEDGV----QVSRLPCLHFYHEDCIGQWLKTSHLCPLCRYPMP 237

BLAST of CcUC08G150370 vs. ExPASy TrEMBL
Match: A0A151UAC1 (E3 ubiquitin-protein ligase RNF181 OS=Cajanus cajan OX=3821 GN=KK1_020498 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.3e-08
Identity = 32/88 (36.36%), Postives = 49/88 (55.68%), Query Frame = 0

Query: 168 QVVRTLRMTFESLRRLKDESFDGSCLMKSCCKEEEEEKCMVCLEGFEEETNTKCSVSQLS 227
           Q VR +  + E++  LK  + D S L        + EKC +C++ F++E     S+  + 
Sbjct: 163 QGVRMVPASKEAIESLKAFTVDSSFL--------KIEKCNICMDKFQDEYGNSLSLLSMP 222

Query: 228 CSHVFHFRCVSQWLSLDHRCPVCRSPMP 256
           C+HVFH  C+ +WL   H CP+CR PMP
Sbjct: 223 CNHVFHGHCIVKWLQTSHMCPLCRYPMP 242

BLAST of CcUC08G150370 vs. ExPASy TrEMBL
Match: A0A5N6R0F2 (RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_008015 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.2e-07
Identity = 47/168 (27.98%), Postives = 81/168 (48.21%), Query Frame = 0

Query: 101 VLYTLSHLSVPDSNPDPLARLIFSFANCHHLSATKSLVPLYISFTSTTVL----RNHIEA 160
           +L  LS +  P  + + ++R I S A    +    S  P+ ++F  TT++     +  E+
Sbjct: 92  MLSLLSDVGAPAEHQEAVSRDISSAAAARSVGMGTS--PIVVTFQHTTLVVVEDDDDDES 151

Query: 161 ADWVYGGAPES---QVVRTLRMTFESLRRLKDESFDGSCLMKSCCKEEEEEKCMVCLEGF 220
            D +  G  ES    V R +  T  ++  L+  +F+           +   +C++C E F
Sbjct: 152 DDMMDMGLRESMAVDVARPIPATRSAIEGLEKVTFEDGL--------QSIGQCIICTEEF 211

Query: 221 EEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMPWVHAFF 262
           E        +++L CSHV+H  C+ +WL   HRCP+CR P+P+V   F
Sbjct: 212 E----GGLELTRLPCSHVYHGDCIVKWLEKSHRCPLCRYPLPYVRLIF 245

BLAST of CcUC08G150370 vs. ExPASy TrEMBL
Match: A0A1R3IHY3 (Zinc finger, RING-type OS=Corchorus olitorius OX=93759 GN=COLO4_23206 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.5e-07
Identity = 45/170 (26.47%), Postives = 81/170 (47.65%), Query Frame = 0

Query: 110 VPDSNPDPLARLIFSFA-------NCHHLSATKSLVPLYISFTSTTVLRNHIEAADWVYG 169
           +PDS  D +  L++ F        N  ++ + K    +  ++    V+  +IEA +WV  
Sbjct: 58  LPDSALDSMGHLLYEFGFTDIYVENFLNVCSMKVSDIVMRNYYKEEVVDIYIEAEEWVDL 117

Query: 170 G-----------APESQVVRTLRMTFESLRRLKDESFDGSCLMKSCCKEEEEEKCMVCLE 229
           G           A E    + +  T ES++ L+      + +       ++ ++CMVCLE
Sbjct: 118 GENYYDEEYLEAAMEESAPKPVPATTESIQALERLELGDNNI-------DDYDQCMVCLE 177

Query: 230 GFEEETNTK--CSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMPWVHA 260
              + +  K   +V+++ CSH+FH  C+ QWL+  H CP+CR  MP  ++
Sbjct: 178 ELSKSSQMKKLSTVARMPCSHLFHEDCIVQWLNTSHFCPLCRFAMPTAYS 220

BLAST of CcUC08G150370 vs. ExPASy TrEMBL
Match: A0A7J6I110 (RING-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_002435 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-07
Identity = 59/198 (29.80%), Postives = 89/198 (44.95%), Query Frame = 0

Query: 66  KPLYIPHSSFFL--DSSTQLLLLPPSYFSSYSAALNFVLYTLSHLSV-----PDSNPDPL 125
           K  Y+   SF +  D+ TQ++L+        +  L F+     H+S       ++NP+ L
Sbjct: 87  KTHYLDQRSFLIMHDTLTQIVLM------GSNLELPFIDLATPHISTFALRNLEANPNSL 146

Query: 126 ARLIFSFANCHHLSATKSLVPLYISFTSTTVL-RNHIEAADWVYGGAPESQVVRTLRMTF 185
              +    N H ++A +   PL        VL R+  EA D           V+T+  T 
Sbjct: 147 --YVAVSINIHTITA-RFPTPLQQQQQDEDVLDRSFREALD----------TVQTVPATQ 206

Query: 186 ESLRRLKDESFDGSCLMKSCCKEEEEEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCV 245
           +S+R L+D S D   L          E C +CLE      + +    ++ CSHVFH  C+
Sbjct: 207 DSIRALQDLSDDDDGL--------SSETCSICLEKISSFGDCRSKGVEMPCSHVFHKDCI 257

Query: 246 SQWLSLDHRCPVCRSPMP 256
            QWL + H CP+CR PMP
Sbjct: 267 VQWLEISHLCPLCRYPMP 257

BLAST of CcUC08G150370 vs. TAIR 10
Match: AT1G74620.1 (RING/U-box superfamily protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.8e-08
Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 0

Query: 202 EEEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMP 256
           EE  C +C+E + E ++    V++L C H FH  C+++WL L+H CP+CRS +P
Sbjct: 179 EENGCAICMEDYIEGSSI---VAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIP 229

BLAST of CcUC08G150370 vs. TAIR 10
Match: AT3G11110.1 (RING/U-box superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.5e-07
Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = 0

Query: 199 KEEEEEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCR 252
           +EEEE++C +CL GFEE    K       CSH +H  CV +WL  +  CP+CR
Sbjct: 100 EEEEEKECCICLGGFEEGEKMKVLP---PCSHCYHCECVDRWLKTESSCPLCR 149

BLAST of CcUC08G150370 vs. TAIR 10
Match: AT3G47990.1 (SUGAR-INSENSITIVE 3 )

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-07
Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 0

Query: 205 KCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCRSPMPWVHAFFPDA 264
           +C++CLE F    +    V  L C+H FH  C+ QWL L+ +CP CR       + FPD 
Sbjct: 234 ECLICLEEF----HIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRC------SVFPDL 293

Query: 265 DVDARSSFSHNST 278
           D+ A S+   + T
Sbjct: 294 DLSALSNLQSSGT 296

BLAST of CcUC08G150370 vs. TAIR 10
Match: AT1G17970.1 (RING/U-box superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 9.8e-07
Identity = 21/49 (42.86%), Postives = 29/49 (59.18%), Query Frame = 0

Query: 203 EEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWLSLDHRCPVCR 252
           + KC +C + +E E      V +L+C H FH  CV QWLS  + CPVC+
Sbjct: 317 DRKCSICQDEYERED----EVGELNCGHSFHVHCVKQWLSRKNACPVCK 361

BLAST of CcUC08G150370 vs. TAIR 10
Match: AT4G26580.1 (RING/U-box superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06
Identity = 26/74 (35.14%), Postives = 40/74 (54.05%), Query Frame = 0

Query: 182 RLKDESFDGSCLMKSCCKEEEEEKCMVCLEGFEEETNTKCSVSQLSCSHVFHFRCVSQWL 241
           +L DE+ D S       +   + +C +CL  ++E    K  V +L CSH FH +CV QWL
Sbjct: 272 KLIDETSDSS-------QANNDPECCICLAKYKE----KEEVRKLPCSHRFHLKCVDQWL 331

Query: 242 SLDHRCPVCRSPMP 256
            +   CP+C+  +P
Sbjct: 332 RIISCCPLCKQDLP 334

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004292643.11.3e-0824.86PREDICTED: E3 ubiquitin ligase BIG BROTHER-like [Fragaria vesca subsp. vesca][more]
XP_038975401.12.9e-0854.90E3 ubiquitin-protein ligase Praja-1-like [Phoenix dactylifera][more]
KAB2603827.16.4e-0825.77nuclear ribonuclease Z-like [Pyrus ussuriensis x Pyrus communis][more]
XP_020217801.11.1e-0736.36E3 ubiquitin-protein ligase SIRP1 [Cajanus cajan] >KYP76265.1 E3 ubiquitin-prote... [more]
KAE8022191.12.4e-0727.98hypothetical protein FH972_008015 [Carpinus fangiana][more]
Match NameE-valueIdentityDescription
Q9SRM02.1e-0645.28RING-H2 finger protein ATL66 OS=Arabidopsis thaliana OX=3702 GN=ATL66 PE=2 SV=1[more]
Q5UQ402.1e-0640.00Probable bifunctional E2/E3 enzyme R795 OS=Acanthamoeba polyphaga mimivirus OX=2... [more]
Q8GYT92.8e-0636.99E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana OX=3702 GN=SIS3 PE=2 SV... [more]
Q90ZT74.8e-0645.28E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis OX=8355 GN=rn... [more]
Q6NRV84.8e-0645.28E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis OX=8355 GN=rnf111-b PE=2... [more]
Match NameE-valueIdentityDescription
A0A5N5FLS43.1e-0825.77Nuclear ribonuclease Z-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=... [more]
A0A151UAC15.3e-0836.36E3 ubiquitin-protein ligase RNF181 OS=Cajanus cajan OX=3821 GN=KK1_020498 PE=4 S... [more]
A0A5N6R0F21.2e-0727.98RING-type domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_0080... [more]
A0A1R3IHY31.5e-0726.47Zinc finger, RING-type OS=Corchorus olitorius OX=93759 GN=COLO4_23206 PE=4 SV=1[more]
A0A7J6I1102.0e-0729.80RING-type domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_002435 P... [more]
Match NameE-valueIdentityDescription
AT1G74620.11.8e-0842.59RING/U-box superfamily protein [more]
AT3G11110.11.5e-0745.28RING/U-box superfamily protein [more]
AT3G47990.12.0e-0736.99SUGAR-INSENSITIVE 3 [more]
AT1G17970.19.8e-0742.86RING/U-box superfamily protein [more]
AT4G26580.11.3e-0635.14RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 206..250
e-value: 2.6E-5
score: 33.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 205..251
e-value: 2.8E-10
score: 40.4
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 206..251
score: 12.563043
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 163..257
e-value: 4.0E-15
score: 57.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..303
NoneNo IPR availablePANTHERPTHR15710E3 UBIQUITIN-PROTEIN LIGASE PRAJAcoord: 192..253
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 199..262

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G150370.1CcUC08G150370.1mRNA