CcUC08G149600 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G149600
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr08: 17269428 .. 17274468 (-)
RNA-Seq ExpressionCcUC08G149600
SyntenyCcUC08G149600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGTGAGTCTTGTATATTGTGTGTGGAAAAGGCAAATACAGGAGTGTATCCATTTTATTTTCTCATTCTGGTATCAAAGGAGAAATGGCCGATGCCTCAAAGGAAACCATTGATCCTCAAAACACTTCTTCAGCACCTCAAAGGAAAGGAGAAATCAACAATATATTAGCAACTTCCAACAAGACATATCAAGTCAGATCGGGACTTTCACCAGTTGGAACTCCCTCCTTTGTGAACCTTCTGAATCAGGTAACTACAATTAAACTTGATCGAGGAAACTTTCTTCTATGGCACAGCATTGTAATACCTATCTTGAAAAGCTACAAATTAGAAGGACATCTCCCGGGTAAAACTCTAGCTCCTGAGATGTCGATCGTGATTCCTCCAAACGATGAAGAAGCTGAAGGATTAGTGATTCCAAATCCTGAGTACGACATTTAGATAGTTGTAGACCAACTGCTGGTAGGGTGGTTGTATAACTCTATGACACCTGAAGTTGTTGTACAAGTGATGGGATATGATGAAGCCAAGTCCCTATGGGATGCAATCTAGGAGTATTATGGAGTTCAATCACGAACTCAAGAAGATTTCAATCAATTAATGCTTCAACAAACAAGAAAGGGCACCATGAAAATGCATGAATACTTGGATACAATGAAAAGGTACTACGATAATCTTGCTATTGTTGGAGCTCCTATGGATATGAGGAGTTTTGTTTCTCATGTTACAACAGGTTTAGATGAGGAAATACAATGTTGTAGTCTGTGTTATGCGTGGTAGAGATTTCACATGGAGCCAATTCCAACAGGAACTAATTGTGTCACATCCCCTCCCGGATTATCCTCCATAACCCGAGAGGAGATGTGAAGACAGCAACCTTTGACTCCTCTGTGTAAGGTTCACTGTCTAACCACTAACACCAAAGTCGACCCAGACGAGATTCTATGCGCAAAGCTCGCTACCATGGGAATGGGAAAGCGTGAGCTAAAGCCCCGTGAGTGACTAGTTTTATAAAACTAAAATCACATAAATTCGTTCCCGTTCCAAATTGTATAAGATCGTTTTAGAAAAATTATACAGAAAACTCGTTTAGTTTCTCAATCATTTCCCTTAGTTGAGGCGGAGCAAAACTCAACACTCTCAACGTCGAAACAACCCTAGTTGGGCTGGAGCAAAGACTCAACACACCCAACGTCGAATACAACCTTTCTCGATGCGAAGCAGAACTCAGGTGCCTTTACTCATGATCCCTCAGCACTAAGCTATCATAAGCTATCATGTACAGAGAGAAATCTTTCATAAATAATATCTCACAAATATGTATTTCAACCTTTTATAGAAAACAGATAACATGCCTCGTAAATAATATAATCATTCATCAAACCACAACTTATAAGAAAACCAGAACAAAATTTCCAATAAATCATTTTCAAATAAAGGAAAGTGTCACTCACAAAAACGCAGAATTTCTTTTTTTTCCTTCAAGTTCTGCTTTCCTGAGCTCCTTGAACGCAAGACTTGAGACTCTAAACCGCAAGGTAGTTGTTTTCCTTTTCTGGCAGCTCAGTTGGACGCAACATTGCTCCTTGAATGCAAGGTTGACAATTAACGCAAGGTGCAGCCTAACAAATGACTCTTCTTGCTTCCCTTTTGGATGCGTTGACCCCTCTTGGATGCTAGGTCCAACTTGAGCGTAGTGTTCACCTAGAACGCAAGGAGATAGCTTTCTCCTGCTTCCTTTCAGAAGCTCCGACTTTTGGATCCTTCCTCTTGCTCCTCTTCCCTCAAGGTCCTACTTATAGCTTTCGAATAGAGTGCTTTCCATATCACTTCTCTTTTCTTTTTGCCACTTGTTTGCGACCTTTGACGCTGTATGACATATCCAACATGAACCCATGCAACCTTTACCAACTCATTTCATGTGTCCAACTTACTCCAGTATACAAACTATTCATCCAACATAGTGTCTCCTATGCGCCCATTTGATCCTCTTTCAGGTTTTAGCTTCATTATTTTCTTCACTTACTTTCGGCCATAATACCTTTGACCCCGTTTCTCCACTGCAAACTACTAGGCGACAATGTCTTAGACACATAATACTATGCGTTTGTACCTTTCTGCATAATATCATGCGTCCAACTCTCTTCCATGTCCAATCTTAGCTACAAGTCCTCTTGTGTGACAACACATCCGACGATGTGGTTTACCCTTGATAACCAAATCCAATTCAAGACTTTATGCGTTTGCACTCTTTGTGTTTACTTTTACTTCGTTCTGCGTCCATGACCTTCCTCCTATCCTTGATGATTCCTTGATTATCCCTCTATGTGTCCTTGAGTTATATTCCAAGATTATTCATTTAACCTTTTCCTTGTACTTAATTATTTCTCTTATGATAAATTAGTATGCGTGCACCTCTTACTTCCAGTCTTTAAGCTTACTTCTCAACCTTCTAATTTATCCAACACTTGAGAACATCCCTCGATAGAAGTCTATGCGTTACTAAGTTGCGATAGTTCCGTAGTTTCTCCTTATGCGTTTATCCTTCCTTTCCGAGACTTAGATTTCTTTCCAACACACCATGACTTAACGTTATTCCTTTTTGCTTATACGTCCTACCTTCGCCAAAGCTACATTTTCTTCCTTAACTAATTCCTATGCGTTTACCCGAAATCAAGGTTACATGTCCATTTTATTATGGAGTTAAGCTCCTCAACGCATAGCCTTAACAACCCATGGTAGCCACCTTCAACACATAGCAACCCTTCAATCATAGCTACCTTGAACACTTGATGAACTCAAACTCTCTTACTTCTTTTCTTACTAGCCATCTTAAGTACTTAGGTTCTGAGACAGGGTATTACAAATTGCATCTGAAGAGCGCAATGAGCAACTAGAGAAGTTCAAGATTGTTGTCACGGCGAATCAAGCCTGTGCAAACCTAGCCAAAGCTGAAACTCACACTTCAAACAGAAATTAGGATGCTCCTTTTCCAAGTCGAAAGAACAGAAATCACTATCCTTCCAACAGGGGAGGAGGAAGAAACAGAGGAAGAGGTAGGTATTATAATTACCCTTAAAACAATCGACCCATTTATCAAGTTTGTGGTAATATGGGTCACACGGCCAAAGTGTGCTACCACTGATATGATCCATCAGATACTCAATCCTTAACAAATACAGGTAGAAACTCCTCTCAACAACAAATGACCTCCGAAACCGACAACCCCACTGCTCTAATGTCCTTTCCAGAAACTTTACAAGATCCATCATGGTATCTAGACAGTGGAGCAAGCAATTATGTCACTGCTGACTATGGAAAACTCTCATTGAAAGGTAAGCATTTATTTGTTAAAAACATTTTAGTTCAAAGGTGCCTATTACTATGTTGGGACTGCTTATATTCAAACCTTAAATGGTCAGCTACTGCTTACAGATGTTTTTGTTGTTCCTTCAATGAAAAAGAATCTTCTTAGCATCTCTAAACTAACTAAAGACAATGTTGTGACAGTACGAGTTTCATGATCTCTTTTGTTATGCAAAGGAAAGGAAGTCCAAGGAGGTCTGTTTAGTAGGCAGACATGAGCATGGGTTGTACCGCCTGATGGGAGTAAATGAAGCCTCAGTCCACAGACGACAAAATAAGGAAGCTAAAGACCAAGTCTACATGGCTGTCACTTCTACCGTGGAGACTCCAAGCAAGAAAGGAGAAGAAGATTTGATTTCTTTTGTCAGTTATATTTTGTTAACATGTACTTTGGATGTTTGGCACCAAAGATTAGGTCATCCATCACCTAGAATTGTGAATCAAATCTTACACAAGTGTAATGCTTCTGTTAAAAGTAATCATAAGTTATCATTTTGTGAGGCTTGTAAATTTGGAAAATCCCACAAATTGACTTTCAACCTATCTGATTCAAGAGCTTCAAAACCATTAGATCTTATTCACATTGATTTATAGGGTCCAACCCCTTTCAAACCTACACATGGTTTCAGTTATTACATTGCTTGTCTTGATGATCATACCCGGTTTACTTGGATTTATCCATTGAAGGCCAATGGAGAAGCATTTGGGGTATTCAAACTAAAACTCAAGTTGAAAATCAATATGGCAGTTCCATAAAAGTAGTAAGATGTGATAATGGAGGTGAATTTAAACCCTTGTTCTAGTATGGTAAAGATCATGGCATTGGAATTCAGTTAACTTGTCCGTATACTTTTGTTCTGAATGGTTGGGTTGAGCGAAAGCATCGTCACATAGTTGAAATGGGTCTTGCCCTCCTTGCACAACCGAATATGCCATTGCATTATTGGTGGGAAGCTTTCCATACGGCTGTGTATCTCATAAATCAAATGCCATCCCCAACTATCAAAAACTGCTCACCCCATTTTCTGCTTAAAGGAAAGGAACCTGACTATAAAAGCCTCCGGGCTTTTGGATCAGCATGCTACTCTTGTCTTTGTCCATATTTGCAGCATAAATTTAAGTTTCACACTGAAAAATGTGTGTTCATTGGCTATAATTTGCATCATAAAGGGTACCGTTGTCTTAGCAGTTCAGGAAATTTTTTTGTCTCTAACCATGTTTGTTTTAATGAAACTGAATTTCCCTTATACAGCTCTCTTCCCTAACCAGGTTGAGGAGATCCCAACACAAATACCACTGTTTTATCTTGGTTCCCAGTCCTTCCTAATTCCCCAGTACTACCACCTAGTCCTTCATTAACCATAAATACTTCCACTCCATCTACCTCACCTATGCATACCACTGAGCCTTCATCACCAACTCACATATCAAATTTCTCCCACCTCTCTACTACTCATCCTCCTTCCTCTGGCACCTCACTTTTTACACCTTTGCCCACTCCTCCTTCCCAACATCACACACCACCTAGCTTATCCTTCACCTACCCAACATCTTCATCTCAACCATATCTATCTCCTCTTAATCCCCATGCTATGGTTACTCGAGCTAAATTCGGCATCTTCAAACCCAAAAGACCTTTTAGTGGCCTAACTCAACTTTCCCCTGCTTAG

mRNA sequence

ATGGTGATCGAAAGAACAGAAATCACTATCCTTCCAACAGGGGAGGAGGAAGAAACAGAGGAAGAGGTAGGTATTATAATTACCCTTAAAACAATCGACCCATTTATCAATCCTTCATTAACCATAAATACTTCCACTCCATCTACCTCACCTATGCATACCACTGAGCCTTCATCACCAACTCACATATCAAATTTCTCCCACCTCTCTACTACTCATCCTCCTTCCTCTGGCACCTCACTTTTTACACCTTTGCCCACTCCTCCTTCCCAACATCACACACCACCTAGCTTATCCTTCACCTACCCAACATCTTCATCTCAACCATATCTATCTCCTCTTAATCCCCATGCTATGGTTACTCGAGCTAAATTCGGCATCTTCAAACCCAAAAGACCTTTTAGTGGCCTAACTCAACTTTCCCCTGCTTAG

Coding sequence (CDS)

ATGGTGATCGAAAGAACAGAAATCACTATCCTTCCAACAGGGGAGGAGGAAGAAACAGAGGAAGAGGTAGGTATTATAATTACCCTTAAAACAATCGACCCATTTATCAATCCTTCATTAACCATAAATACTTCCACTCCATCTACCTCACCTATGCATACCACTGAGCCTTCATCACCAACTCACATATCAAATTTCTCCCACCTCTCTACTACTCATCCTCCTTCCTCTGGCACCTCACTTTTTACACCTTTGCCCACTCCTCCTTCCCAACATCACACACCACCTAGCTTATCCTTCACCTACCCAACATCTTCATCTCAACCATATCTATCTCCTCTTAATCCCCATGCTATGGTTACTCGAGCTAAATTCGGCATCTTCAAACCCAAAAGACCTTTTAGTGGCCTAACTCAACTTTCCCCTGCTTAG

Protein sequence

MVIERTEITILPTGEEEETEEEVGIIITLKTIDPFINPSLTINTSTPSTSPMHTTEPSSPTHISNFSHLSTTHPPSSGTSLFTPLPTPPSQHHTPPSLSFTYPTSSSQPYLSPLNPHAMVTRAKFGIFKPKRPFSGLTQLSPA
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G149600.1CcUC08G149600.1mRNA