CcUC08G149210 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G149210
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr08: 15723402 .. 15726453 (+)
RNA-Seq ExpressionCcUC08G149210
SyntenyCcUC08G149210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGGTTGAAGGTGGTAGTTGGAGTTGGCCGTCAGCAGTCACCAGAGGTGGTGGCCGAATATTGGCAAACGGCGGTCGCCCGAGGAAGTGGCCCGAGTTTCGCGTGCACATTATAGAGGATTAAACATTAAACACTCCAAAATTCATTTTCTAAAAGTTGGTTTTCAAGTGTTCAACCTCAACCAACATATTTTATAAACTCATTTTTTCAAAATCCATTTTGAGTGGTTGCCAAATGACGTTGTCCACAAGAATGGGTATCGTAAGCCTCTCTCCGCAATCAAATAAAATATAATTTGCCAAACCAACTACTTATACTACTGAGTAGCACAAACGGCAAGTCTGGGGTCAAACCACAAGGAGCCTAGGATAGAATCTCTATAAGCTAAATTGGTCTATGAAAAGCAATAAAAACAGAGATTTTTTTTTTTCTTGATCCATCAAATGTTCGATTGATCATAGGATTACTCAGGGATTATCTCTCTCGATTTAACATGCTTAGCTAACTTGCCTGAATAGCCCAAAGCAAGCACCCTAATTACTAATTAATCACTTAATTAAAACAAATGCTTGATTAATTGGGTTCGATAACGACCATAGAAATCTTGCATTTACTTTAATTAATTTATTAATTAGACTAATTGTTTAGTTGTTTGAGTTTGATAGTGGCCATAACAAGCAAACAATTGCATTAAGCTTGATAGGTTCATCTAAGACAATTAATAACCCGGATATCCTTAAGTTACTAATCGATTGCGTTTTTTAAACTAGTTAATCATGAAATGTCTGTGAAAAAATTATTCTAAACAACCTAGTTTCACACCCCAAGCATGCTTTAACCCTTGCCCTCTTTGAGACTAGAAACATATTAAAGCATCTTAATCTCTAGGAATCAAAGAATGAATGATAATTGATCAAGCCTATCATACATCTAAGCATAAAAATTTAAATGCATTCAAGAACCACAAAAAATCAAAGAGAACTATGGATTAAGAACAAACATCCTCACAATGGATCCATGGGTTTCACCTAGACCTAAGCTAGCAACTCACCTTAGCTACAAGATCGGTCCAAGATAAACTTTACAATCATCAAATACACTTAAGAATAAAGAAATATAGAGGGAAGGAGAAGAGGAGAAGAGAAAATCAGGTTGTAGGCTGAAAGCCCGAGAGTGTCTACCCTAAAATCGGCCAAAATCGTATTTATAAAAAGGGGGGAGTGCGTGGCTTTAAGGCAGCAATGCTACACTTTCCATAGAAGTTGTAGTGTTGGTTTTGAGTGTCATGATCCTATGCAAAATTTTGCTTTCGGGTTGACAGCGTAGAGCACAGCGTAGGGCACATGGCAGCGACGCTCCACAGAGGCATTTTGGTCAGTTTTCTTCTCTCCCTTTATGGTCGATGCTTTGGAGCTCCATTTTGGTTTGTTTTTGTCCCGTTTCGACTCTGGTGGTTCGCTTAGTTGCTTAATACTCACAAAATAGCCTAATAAACATACAAAATCTACGAACACACTCTAACTCCTACCAGAGATTCGAGAAAAAAGTGTGCCCTCGTGGGGAAGCTATGAAGAAAGAATTGTCAAAATGAAAATCAAGCATTTTAGCTTTTTTTAGGAGAATTTTAGACTTTTCAGTATGTGGAGTCCTCCACTAAAAATTTGGAACAGTAAGAAAGAGGTCGGAAAAAGAAAAAGTGTACTTTTGTCCATTAAAAACTATTTTGGATTAGAGATTGACAATTTTACTAATTTTAGTTACGGAGGCATAAACCAAGCTTTAAAGTTTAAAGAGATGAACATTTGTACCTTTATATTGTATAAGTCAAGGAATATATACTTTTTTACTTTTTAAAATTTTGAAACAGATAAGCGACGTAACATTTATACCTTTAAACTCCACTCATTTGATTCGGGTATGACATGAAACCCAATGACCCGAAGCACTACAATGTTGACACGTGTTAAAAGGCAAGTGACAAAGTGGGGCCAACAAAACACAGTAGATCGGAACCTCTCAGAAAAAAGGATAAGGCCTTAAAAAAAAAGGGTCCTAGTCAACTTTCTCGCACCACGAAATAACTTCTCAATTTCCCAAACATAAAATCAAAAAATATAAAATATAAAATATAAAGGCAAAAGAAAGAAAGAAAAAGTACGAATTCATTCCCTTTGGTCCCCCCAAAAAGCCTCCATTTTAGAATGGACTATATATATAATTTTTTTTAAGAGTAAAGTTACATAATAACAAACCAACCACCCAACTACAAACTTACTCGTCATTCATGACCATGGAAATATACAATATAGAAGTGCTTTTTTTTTTTTCTTTTTTTTTTAGATTAAAGAACAACTTAATAAGGATGCAAAAAATAGTGACATTCAATAACACTTTTTAATTTTGGTCATACTTGCTTTAAAGATTTTTTTAGTTCAATCATTTTGGAAATTAAACTTACAATCTCTAAAGAAGAATACTATATTAATTATTATTGAGGTAAGTTCACTTTGACTAAATTAGTTTAAACTTTAATTTCTAAACTTAAAAGCATATGTGATGAGTTTATCAAAATTTTTAGTTTCTAATTTCAATTTTATGTGATTTAAAAATTATAAAAACTCAAATGAATTCTATATATTTTTATTAAAAGAATTGCCTTCTAGATTTAATATAATCGTAAACTTTAATTTGTGGATATTAAAAAATGTCAAATAAAGTCGGTAGATACAAAAGACATAAACTTGCAAGTTAATTCATGTTTATCCTTTCTTATTTTTATTATATTCTTACTATAAATTATTATATTTGTATTAGAAAGAAATAGAAAAATAAGAAGTAAAGGCGTTCCTTCTTTCTCCGTAGGCGCACGTCCGAGCACCCAGCGGCTGCTGTAGTTCTATATTCTTCACTTTATCTTCTCTTTAAACCAAATCCCATCTCTTATTCAATTTCTTTTATCTTATCTTCCTCCCTCTGTGGCCGTTGCCGATCGCCAGCAGTTTCACTTTCTGCTGCAACCTCCGACAACTCTGAATCGGCCGGAATCTAA

mRNA sequence

ATGGTGGTTGAAGGTGGTAGTTGGAGTTGGCCGTCAGCAGTCACCAGAGGTGGTGGCCGAATATTGGCAAACGGCGGTCGCCCGAGGAAGTGGCGCACGTCCGAGCACCCAGCGGCTGCTGTAGTTCTATATTCTTCACTTTATCTTCTCTTTAAACCAAATCCCATCTCTTATTCAATTTCTTTTATCTTATCTTCCTCCCTCTGTGGCCGTTGCCGATCGCCAGCAGTTTCACTTTCTGCTGCAACCTCCGACAACTCTGAATCGGCCGGAATCTAA

Coding sequence (CDS)

ATGGTGGTTGAAGGTGGTAGTTGGAGTTGGCCGTCAGCAGTCACCAGAGGTGGTGGCCGAATATTGGCAAACGGCGGTCGCCCGAGGAAGTGGCGCACGTCCGAGCACCCAGCGGCTGCTGTAGTTCTATATTCTTCACTTTATCTTCTCTTTAAACCAAATCCCATCTCTTATTCAATTTCTTTTATCTTATCTTCCTCCCTCTGTGGCCGTTGCCGATCGCCAGCAGTTTCACTTTCTGCTGCAACCTCCGACAACTCTGAATCGGCCGGAATCTAA

Protein sequence

MVVEGGSWSWPSAVTRGGGRILANGGRPRKWRTSEHPAAAVVLYSSLYLLFKPNPISYSISFILSSSLCGRCRSPAVSLSAATSDNSESAGI
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..31

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G149210.1CcUC08G149210.1mRNA