CcUC08G148830 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G148830
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	40S ribosomal protein S15a-5-like
Location	CicolChr08: 13869328 .. 13872303 (+)
RNA-Seq Expression	CcUC08G148830
Synteny	CcUC08G148830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTGAAAATTAGCCCTTCAAAAGACTAATCCCCATAGTAGTGAATGCTGGAAACTGGCTCCCTCTTTCCGACCCTCTCTCTTCCGCCGATCAGTAAATTCTCGAGTCGTCTCTCTCAAGCTAGGGCTGAGCCAACCATTGCTCCGCCGTTATTGGGCGTTTTCTCGTCTGCTTCGCCGGTGTTCAAAGAGGCCATAGGTAAAGTTATAATCAATTTCCATTTCGAAATTTCCTTTTCCACTAGTCTTGCGTTAGAATTTTCTCGGTAACGTAGGAAAACGACGCTATAATAGAGGAAATTTGGTCTCAGGTTTTGTGTCTTTTGTGTACTGTAAGATATGGGAAGGAGGATTTTGAACGATGCATTAAGAGCTATTGTCAATGCTGAGAGGAGGGGAAAATCTCTGGTGGAACTGAAACCCATTTCGACTGTCATGTCTTCTTTCCTTAGAGTCATGAAAGATCATGGTAAAAATTACGTTTCTCTAGCTTTTTTGATGCTGAGCTGAATTGGATTTTACCGTTTCTAAGTCCTATTTGTTGCTTAGGACTTCTGCTCCGGTGTTTTACTTCATGCTTGCAAGTGATAGATGCATATTGGCATTTCCTTCATGTTGAGCTTCTTCCTCATCATTTAGTATCTTTTTTCTACGTGGATGTTTATTTCCCTGGATTTTGTTGTTTTTGACTTTGGAGTATGGTGAATGTTCTGTCAATGAATTAACATTTGAAGTGCAAAATGATTCCCATTTCTTGTTTTGATTTTCAAAAGGAGGAAAAAAGCTTAGCTGGTCAACTTGCCTCGTTTGGGTTTTACTCTGATTGTACTGCTGCTTGTTGCTGTGTAGTTGTTGGATAGCCTAGAATGACTTGAAGTTAGAAGTTTTGGAAAGCTTTGATTGTGGAGATTTAGACCTTTTATACTCTGTTGCACTGTTTTTTATCGATAGAGGAGGAAGAGTTGGTAAAAGTTTTGCTACTAACATCAAATCAAATACAACGGACCTCCAATCAACTTCTGTTCATAAGGAATCTGAATTGTTTTAAAAATATTTTCATTACTTTGTACTTGACTACATTGGTTTCTCCCTGGGCCTAATTGTAGATTCATTGCTGCTGTGAAATTTTATTTTTGAACCTCTTTTTTTTGATGTACAATATTCAGAAAATTGAAACAACCTCGGGTACTTACATTCTAGACTATAACTTCACCCAGCTCCTTATTAATTAGAATGCAACCTGGCATGATTTTACTTCTATGTTTGCCATGAGGATCTAGGAAGGTTTGAATTGAAATGGCCTTGCCAAGACTTCATTGAACATTTTCCAGTGTCTACTAGCTCTGACACATATGCTCCATGACTTCCTCCTGCTTCCAGGCCCTATGGATTATGTTTATTCTAATTTTACCAGGATCTAACGCAAAGGGCAGGAAGTTTGTTAAATACATTTAATTGAAATTTATTTCTTCAATTCAACTAATCATCTCACATATTGAATTGAATTTTTATAGTCATATAATTTATGATTGATTGCAAGTCATTTGTAGTCCAAAAGTTTGATATCTGCCAATCCTAGAGTGCACTATTACTGTTGGAAACCATTGTAATTCTAATTGAATTGGGAGGGGAAAATTGGAACATCAGCAATATTGGAAGTTCTATAATGCGAACACATTAGTTTGCTGGTTAGTGCAAGTCTTTTCCACCAGAAATTTGATGAAAATAGGTATACCTATTGACGGTTCTGATACTCGTAATTGACATTTTCTTAAAAAAATAACAGTAGATGTATACTCTTATTGTTAAGGGTTTCATATTAGACTATTAGTTATCTAATCTGTAAGTTCATCTCATTTATGGAGTCTTCAAATTTTATATAAAGGATATATCAAGGACTTTCAAGTTCACGATCCACAAAGAGTTGGAAGGATAACAGTGGAGCTACAAGGTAGGATCAAGGATTGCAAGGCTATCACCCACAGGCAGGACATCAAGGCAAAGGATATTGAAGCTTACAGACTACAAACACTTCCAACACGTCAGGTGTTTTAGCTAATATATTTTACATTCAAATCTGAATGGATTCATCGGTCAATCTTGATTGTACCTAGTTGTCCACTTTCTTTGGTCATCTGTCTACCCATGTTGAATGGTCAATATGCATGTCATTTAGTTAACATTATTGTCTGGCAGAGACTATATAGGATCATAATTCAAAATTTAGAGACAAGTGATTATTTCTTTTTTCCTTTTTGAAGTTCACCATCAAAATTTATGGCGGTATGCTCATTGCTAAGATACTTGGCTGAGTAGGTGTAGGTCTTGTTTATCTGACCAAATTTCTTGCTCTCCCCTTGTCTGCAGTGGGGCAATGTCTTGATTACTAAATAGCCTATTCTGACTGAATAAATTCTTGGCCAAGTAGGTCTTTTGTTTATATTAACCAAATGTTTTACTCTCCTGTCTCTACAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGGGGTCAGGTTCTTGGATTCTTTCATTAGAGAGCTTCCTTGGTTGGCTGTTCCTTGATTTGGAGATGCTTGTGAGTTTTTTTTCCTTCCCTTTTTAGATGTTTCCCCTATTACATTGGGATCTTCTATTGCTTAGTCTTCTTATTTGTGGCCTTTTGATTTTGTATTATCAAATGGTGTATGCTTTTAGTCATATAAGGCAGGCACTGTTGTCCTCTTTTTTAGTCTTGTTGCTCCCACCAGGAATGTAAGCATAATGTCAGTTTTGAACTTCAAAAAAATCACAAAGAAAAACTTAATACAATATCTTGCTAGGACAATGACCACCAGATTGTATGAATTGGGAATTTCCAAATGGATTTACAAATTTCTTGTTTCCACCGTTCGAGTGATTGTGCAGCGGTCTACGGAAGACAATCGGATCTTGGGGTGA

mRNA sequence

TTTTGAAAATTAGCCCTTCAAAAGACTAATCCCCATAGTAGTGAATGCTGGAAACTGGCTCCCTCTTTCCGACCCTCTCTCTTCCGCCGATCAGTAAATTCTCGAGTCGTCTCTCTCAAGCTAGGGCTGAGCCAACCATTGCTCCGCCGTTATTGGGCGTTTTCTCGTCTGCTTCGCCGGTGTTCAAAGAGGCCATAGATATGGGAAGGAGGATTTTGAACGATGCATTAAGAGCTATTGTCAATGCTGAGAGGAGGGGAAAATCTCTGGTGGAACTGAAACCCATTTCGACTGTCATGTCTTCTTTCCTTAGAGTCATGAAAGATCATGGATATATCAAGGACTTTCAAGTTCACGATCCACAAAGAGTTGGAAGGATAACAGTGGAGCTACAAGGTAGGATCAAGGATTGCAAGGCTATCACCCACAGGCAGGACATCAAGGCAAAGGATATTGAAGCTTACAGACTACAAACACTTCCAACACGTCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGGGGTCAGTCATATAAGGCAGGCACTGTTGTCCTCTTTTTTAGTCTTGTTGCTCCCACCAGGAATGTAAGCATAATGTCAGTTTTGAACTTCAAAAAAATCACAAAGAAAAACTTAATACAATATCTTGCTAGGACAATGACCACCAGATTGTATGAATTGGGAATTTCCAAATGGATTTACAAATTTCTTGTTTCCACCGTTCGAGTGATTGTGCAGCGGTCTACGGAAGACAATCGGATCTTGGGGTGA

Coding sequence (CDS)

ATGCTGGAAACTGGCTCCCTCTTTCCGACCCTCTCTCTTCCGCCGATCAGTAAATTCTCGAGTCGTCTCTCTCAAGCTAGGGCTGAGCCAACCATTGCTCCGCCGTTATTGGGCGTTTTCTCGTCTGCTTCGCCGGTGTTCAAAGAGGCCATAGATATGGGAAGGAGGATTTTGAACGATGCATTAAGAGCTATTGTCAATGCTGAGAGGAGGGGAAAATCTCTGGTGGAACTGAAACCCATTTCGACTGTCATGTCTTCTTTCCTTAGAGTCATGAAAGATCATGGATATATCAAGGACTTTCAAGTTCACGATCCACAAAGAGTTGGAAGGATAACAGTGGAGCTACAAGGTAGGATCAAGGATTGCAAGGCTATCACCCACAGGCAGGACATCAAGGCAAAGGATATTGAAGCTTACAGACTACAAACACTTCCAACACGTCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATGAAAAGGAATGTTGGGGGTCAGTCATATAAGGCAGGCACTGTTGTCCTCTTTTTTAGTCTTGTTGCTCCCACCAGGAATGTAAGCATAATGTCAGTTTTGAACTTCAAAAAAATCACAAAGAAAAACTTAATACAATATCTTGCTAGGACAATGACCACCAGATTGTATGAATTGGGAATTTCCAAATGGATTTACAAATTTCTTGTTTCCACCGTTCGAGTGATTGTGCAGCGGTCTACGGAAGACAATCGGATCTTGGGGTGA

Protein sequence

MLETGSLFPTLSLPPISKFSSRLSQARAEPTIAPPLLGVFSSASPVFKEAIDMGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRITVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQSYKAGTVVLFFSLVAPTRNVSIMSVLNFKKITKKNLIQYLARTMTTRLYELGISKWIYKFLVSTVRVIVQRSTEDNRILG

Homology

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BLAST of CcUC08G148830 vs. NCBI nr
Match: XP_038884441.1 (40S ribosomal protein S15a-5-like [Benincasa hispida])

HSP 1 Score: 245.7 bits (626), Expect = 4.2e-61
Identity = 119/123 (96.75%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALRAIVNAERRGKS+VELKPISTVMSSFL+VMKDHGYIKDFQVHDPQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKSMVELKPISTVMSSFLKVMKDHGYIKDFQVHDPQRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TVELQGRIKDCKAITHRQDIKAKDIEAYRL+TLPT QWGYVVITTPEGILDHEEAMKRNV
Sbjct: 61  TVELQGRIKDCKAITHRQDIKAKDIEAYRLRTLPTHQWGYVVITTPEGILDHEEAMKRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. NCBI nr
Match: XP_022150338.1 (40S ribosomal protein S15a-5-like isoform X2 [Momordica charantia])

HSP 1 Score: 238.0 bits (606), Expect = 8.7e-59
Identity = 114/123 (92.68%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALR+IVNAERRGKS+VELKPISTVMSSFL+VMKDHGYIKD+QV+DP RVGRI
Sbjct: 1   MGRRILNDALRSIVNAERRGKSMVELKPISTVMSSFLKVMKDHGYIKDYQVYDPHRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TVELQGRIKDCKAITHRQDIKAKDIEAYRL+TLPT QWGYVVITTPEGILDHEEAM+RNV
Sbjct: 61  TVELQGRIKDCKAITHRQDIKAKDIEAYRLRTLPTHQWGYVVITTPEGILDHEEAMRRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. NCBI nr
Match: XP_022150337.1 (40S ribosomal protein S15a-5-like isoform X1 [Momordica charantia])

HSP 1 Score: 237.7 bits (605), Expect = 1.1e-58
Identity = 119/139 (85.61%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALR+IVNAERRGKS+VELKPISTVMSSFL+VMKDHGYIKD+QV+DP RVGRI
Sbjct: 1   MGRRILNDALRSIVNAERRGKSMVELKPISTVMSSFLKVMKDHGYIKDYQVYDPHRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TVELQGRIKDCKAITHRQDIKAKDIEAYRL+TLPT QWGYVVITTPEGILDHEEAM+RNV
Sbjct: 61  TVELQGRIKDCKAITHRQDIKAKDIEAYRLRTLPTHQWGYVVITTPEGILDHEEAMRRNV 120

Query: 173 GGQSYKA----GTVVLFFS 188
           G  S+ A    G V LF S
Sbjct: 121 GDVSHLALGSYGLVFLFVS 139

[Close]

BLAST of CcUC08G148830 vs. NCBI nr
Match: XP_023005097.1 (40S ribosomal protein S15a-5-like [Cucurbita maxima] >XP_023005098.1 40S ribosomal protein S15a-5-like [Cucurbita maxima])

HSP 1 Score: 237.3 bits (604), Expect = 1.5e-58
Identity = 112/123 (91.06%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALRAIVNAERRGK+ VELKPISTVMSSFL+VMKDHGYI DFQVHDPQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKATVELKPISTVMSSFLKVMKDHGYINDFQVHDPQRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TVELQGRIKDCKA+THRQDIKAK++EAYR++TLPTRQWGYVVITTPEGI+DHEEA+KRNV
Sbjct: 61  TVELQGRIKDCKALTHRQDIKAKELEAYRIRTLPTRQWGYVVITTPEGIMDHEEAIKRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. NCBI nr
Match: XP_023514843.1 (40S ribosomal protein S15a-2-like [Cucurbita pepo subsp. pepo] >XP_023514844.1 40S ribosomal protein S15a-2-like [Cucurbita pepo subsp. pepo] >XP_023514845.1 40S ribosomal protein S15a-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.3 bits (604), Expect = 1.5e-58
Identity = 113/123 (91.87%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALRAIVNAERRGK+ VELKPIS+VMSSFL+VMKDHGYI DFQVHDPQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TVELQGRIKDCKA+THRQDIKAK+IEAYR++TLPTRQWGYVVITTPEGILDHEEA+KRNV
Sbjct: 61  TVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVITTPEGILDHEEAIKRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. ExPASy Swiss-Prot
Match: Q9M0E0 (40S ribosomal protein S15a-5 OS=Arabidopsis thaliana OX=3702 GN=RPS15AE PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.3e-54
Identity = 100/123 (81.30%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALR IVNAERRGK+ VELKPISTVMSSFLR+MK+ GYIK+FQV+DP RVGRI
Sbjct: 1   MGRRILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TV+LQGR+ DCKA+T+RQD++AK+IE Y  +TLPTRQWGYVVITTP+GILDHEEA+KRNV
Sbjct: 61  TVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. ExPASy Swiss-Prot
Match: O82205 (40S ribosomal protein S15a-2 OS=Arabidopsis thaliana OX=3702 GN=RPS15AB PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.4e-53
Identity = 96/123 (78.05%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALR IVNAE+RGK+ VELKP+STVMSSFL++MK+ GYIK+FQVHDP RVGRI
Sbjct: 1   MGRRILNDALRTIVNAEKRGKASVELKPVSTVMSSFLKIMKEKGYIKNFQVHDPHRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TV+LQGR+ DCKA+T+RQD+KA +I  Y  +TLPTRQWGY+VITTP+GILDHEEA+KRNV
Sbjct: 61  TVDLQGRVNDCKALTYRQDVKANEIGQYTERTLPTRQWGYIVITTPDGILDHEEAIKRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. ExPASy Swiss-Prot
Match: Q9AT34 (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-29
Identity = 60/119 (50.42%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 57  ILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRITVEL 116
           +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL
Sbjct: 6   VLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 117 QGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQ 176
            GR+  C  I+ R D+  K+IE +  + LP+RQ+GY+V+TT  GI+DHEEA ++NVGG+
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGK 124

[Close]

BLAST of CcUC08G148830 vs. ExPASy Swiss-Prot
Match: P42798 (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29
Identity = 60/119 (50.42%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 57  ILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRITVEL 116
           +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL
Sbjct: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 117 QGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQ 176
            GR+  C  I+ R D+  K+IE +  + LP+RQ+GY+V+TT  GI+DHEEA ++NVGG+
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGK 124

[Close]

BLAST of CcUC08G148830 vs. ExPASy Swiss-Prot
Match: O80646 (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.5e-29
Identity = 59/119 (49.58%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 57  ILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRITVEL 116
           +LND L+++ NAE++GK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL
Sbjct: 6   VLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGKIVVEL 65

Query: 117 QGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQ 176
            GR+ +C  I+ R D+  K+IE +  + LP+RQ+GY+V+TT  GI+DHEEA K+NVGG+
Sbjct: 66  NGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKNVGGK 124

[Close]

BLAST of CcUC08G148830 vs. ExPASy TrEMBL
Match: A0A6J1D967 (40S ribosomal protein S15a-5-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018536 PE=3 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 4.2e-59
Identity = 114/123 (92.68%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALR+IVNAERRGKS+VELKPISTVMSSFL+VMKDHGYIKD+QV+DP RVGRI
Sbjct: 1   MGRRILNDALRSIVNAERRGKSMVELKPISTVMSSFLKVMKDHGYIKDYQVYDPHRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TVELQGRIKDCKAITHRQDIKAKDIEAYRL+TLPT QWGYVVITTPEGILDHEEAM+RNV
Sbjct: 61  TVELQGRIKDCKAITHRQDIKAKDIEAYRLRTLPTHQWGYVVITTPEGILDHEEAMRRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. ExPASy TrEMBL
Match: A0A6J1DAG9 (40S ribosomal protein S15a-5-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018536 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 5.5e-59
Identity = 119/139 (85.61%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALR+IVNAERRGKS+VELKPISTVMSSFL+VMKDHGYIKD+QV+DP RVGRI
Sbjct: 1   MGRRILNDALRSIVNAERRGKSMVELKPISTVMSSFLKVMKDHGYIKDYQVYDPHRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TVELQGRIKDCKAITHRQDIKAKDIEAYRL+TLPT QWGYVVITTPEGILDHEEAM+RNV
Sbjct: 61  TVELQGRIKDCKAITHRQDIKAKDIEAYRLRTLPTHQWGYVVITTPEGILDHEEAMRRNV 120

Query: 173 GGQSYKA----GTVVLFFS 188
           G  S+ A    G V LF S
Sbjct: 121 GDVSHLALGSYGLVFLFVS 139

[Close]

BLAST of CcUC08G148830 vs. ExPASy TrEMBL
Match: A0A6J1KS88 (40S ribosomal protein S15a-5-like OS=Cucurbita maxima OX=3661 GN=LOC111498187 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 7.2e-59
Identity = 112/123 (91.06%), Postives = 121/123 (98.37%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALRAIVNAERRGK+ VELKPISTVMSSFL+VMKDHGYI DFQVHDPQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKATVELKPISTVMSSFLKVMKDHGYINDFQVHDPQRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TVELQGRIKDCKA+THRQDIKAK++EAYR++TLPTRQWGYVVITTPEGI+DHEEA+KRNV
Sbjct: 61  TVELQGRIKDCKALTHRQDIKAKELEAYRIRTLPTRQWGYVVITTPEGIMDHEEAIKRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. ExPASy TrEMBL
Match: A0A5D3D2U5 (40S ribosomal protein S15a-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00640 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 113/123 (91.87%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALRAIVNAERRGKS+VELKPISTVM+SFL+VMKDHGYIKD+QVH+PQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TV+LQGRIKDCKA+T+RQDIKAKDIEAYRL+TLPT QWGYVVITTPEGILDHEEAMKRNV
Sbjct: 61  TVDLQGRIKDCKALTYRQDIKAKDIEAYRLRTLPTLQWGYVVITTPEGILDHEEAMKRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. ExPASy TrEMBL
Match: A0A1S3BDC0 (40S ribosomal protein S15a-2-like OS=Cucumis melo OX=3656 GN=LOC103488655 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 1.2e-58
Identity = 113/123 (91.87%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALRAIVNAERRGKS+VELKPISTVM+SFL+VMKDHGYIKD+QVH+PQRVGRI
Sbjct: 1   MGRRILNDALRAIVNAERRGKSMVELKPISTVMASFLKVMKDHGYIKDYQVHNPQRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TV+LQGRIKDCKA+T+RQDIKAKDIEAYRL+TLPT QWGYVVITTPEGILDHEEAMKRNV
Sbjct: 61  TVDLQGRIKDCKALTYRQDIKAKDIEAYRLRTLPTLQWGYVVITTPEGILDHEEAMKRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. TAIR 10
Match: AT4G29430.1 (ribosomal protein S15A E )

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-55
Identity = 100/123 (81.30%), Postives = 115/123 (93.50%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALR IVNAERRGK+ VELKPISTVMSSFLR+MK+ GYIK+FQV+DP RVGRI
Sbjct: 1   MGRRILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TV+LQGR+ DCKA+T+RQD++AK+IE Y  +TLPTRQWGYVVITTP+GILDHEEA+KRNV
Sbjct: 61  TVDLQGRVNDCKALTYRQDVRAKEIEKYTERTLPTRQWGYVVITTPDGILDHEEAIKRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. TAIR 10
Match: AT2G19720.1 (ribosomal protein S15A B )

HSP 1 Score: 209.5 bits (532), Expect = 3.1e-54
Identity = 96/123 (78.05%), Postives = 113/123 (91.87%), Query Frame = 0


Query: 53  MGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRI 112
           MGRRILNDALR IVNAE+RGK+ VELKP+STVMSSFL++MK+ GYIK+FQVHDP RVGRI
Sbjct: 1   MGRRILNDALRTIVNAEKRGKASVELKPVSTVMSSFLKIMKEKGYIKNFQVHDPHRVGRI 60

Query: 113 TVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNV 172
           TV+LQGR+ DCKA+T+RQD+KA +I  Y  +TLPTRQWGY+VITTP+GILDHEEA+KRNV
Sbjct: 61  TVDLQGRVNDCKALTYRQDVKANEIGQYTERTLPTRQWGYIVITTPDGILDHEEAIKRNV 120

Query: 173 GGQ 176
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CcUC08G148830 vs. TAIR 10
Match: AT2G39590.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 134.0 bits (336), Expect = 1.7e-31
Identity = 62/127 (48.82%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 49  EAIDMGRRILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQR 108
           EAI +   +LND L+++ NAE++GK  V ++P S V+  FL VM+ HGYI +F+  D  R
Sbjct: 4   EAIMVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHR 63

Query: 109 VGRITVELQGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAM 168
            G+I VEL GR+ +C  I+ R D+  K+IE +  + LP+RQ+GY+V+TT  GI+DHEEA 
Sbjct: 64  SGKIVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEAR 123

Query: 169 KRNVGGQ 176
           K+NVGG+
Sbjct: 124 KKNVGGK 130

[Close]

BLAST of CcUC08G148830 vs. TAIR 10
Match: AT1G07770.1 (ribosomal protein S15A )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 60/119 (50.42%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 57  ILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRITVEL 116
           +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL
Sbjct: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 117 QGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQ 176
            GR+  C  I+ R D+  K+IE +  + LP+RQ+GY+V+TT  GI+DHEEA ++NVGG+
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGK 124

[Close]

BLAST of CcUC08G148830 vs. TAIR 10
Match: AT1G07770.2 (ribosomal protein S15A )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 60/119 (50.42%), Postives = 86/119 (72.27%), Query Frame = 0


Query: 57  ILNDALRAIVNAERRGKSLVELKPISTVMSSFLRVMKDHGYIKDFQVHDPQRVGRITVEL 116
           +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL
Sbjct: 6   VLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVEL 65

Query: 117 QGRIKDCKAITHRQDIKAKDIEAYRLQTLPTRQWGYVVITTPEGILDHEEAMKRNVGGQ 176
            GR+  C  I+ R D+  K+IE +  + LP+RQ+GY+V+TT  GI+DHEEA ++NVGG+
Sbjct: 66  NGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGK 124

The following BLAST results are available for this feature:

BLAST of CcUC08G148830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884441.1	4.2e-61	96.75	40S ribosomal protein S15a-5-like [Benincasa hispida]	[more]
XP_022150338.1	8.7e-59	92.68	40S ribosomal protein S15a-5-like isoform X2 [Momordica charantia]	[more]
XP_022150337.1	1.1e-58	85.61	40S ribosomal protein S15a-5-like isoform X1 [Momordica charantia]	[more]
XP_023005097.1	1.5e-58	91.06	40S ribosomal protein S15a-5-like [Cucurbita maxima] >XP_023005098.1 40S ribosom...	[more]
XP_023514843.1	1.5e-58	91.87	40S ribosomal protein S15a-2-like [Cucurbita pepo subsp. pepo] >XP_023514844.1 4...	[more]

BLAST of CcUC08G148830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0E0	2.3e-54	81.30	40S ribosomal protein S15a-5 OS=Arabidopsis thaliana OX=3702 GN=RPS15AE PE=1 SV=...	[more]
O82205	4.4e-53	78.05	40S ribosomal protein S15a-2 OS=Arabidopsis thaliana OX=3702 GN=RPS15AB PE=2 SV=...	[more]
Q9AT34	1.2e-29	50.42	40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3	[more]
P42798	1.5e-29	50.42	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=...	[more]
O80646	1.5e-29	49.58	40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=...	[more]

BLAST of CcUC08G148830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D967	4.2e-59	92.68	40S ribosomal protein S15a-5-like isoform X2 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1DAG9	5.5e-59	85.61	40S ribosomal protein S15a-5-like isoform X1 OS=Momordica charantia OX=3673 GN=L...	[more]
A0A6J1KS88	7.2e-59	91.06	40S ribosomal protein S15a-5-like OS=Cucurbita maxima OX=3661 GN=LOC111498187 PE...	[more]
A0A5D3D2U5	1.2e-58	91.87	40S ribosomal protein S15a-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3BDC0	1.2e-58	91.87	40S ribosomal protein S15a-2-like OS=Cucumis melo OX=3656 GN=LOC103488655 PE=3 S...	[more]

BLAST of CcUC08G148830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29430.1	1.6e-55	81.30	ribosomal protein S15A E	[more]
AT2G19720.1	3.1e-54	78.05	ribosomal protein S15A B	[more]
AT2G39590.1	1.7e-31	48.82	Ribosomal protein S8 family protein	[more]
AT1G07770.1	1.1e-30	50.42	ribosomal protein S15A	[more]
AT1G07770.2	1.1e-30	50.42	ribosomal protein S15A	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 58..175 e-value: 2.8E-19 score: 69.3
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 53..176
None	No IPR available	GENE3D	3.30.1490.10		coord: 121..177 e-value: 1.2E-20 score: 74.9
None	No IPR available	GENE3D	3.30.1370.30		coord: 53..120 e-value: 1.1E-32 score: 113.6
None	No IPR available	PANTHER	PTHR11758:SF28	40S RIBOSOMAL PROTEIN S15A-2	coord: 53..176
IPR035987	Ribosomal protein S8 superfamily	SUPERFAMILY	56047	Ribosomal protein S8	coord: 55..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G148830.1	CcUC08G148830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome