CcUC08G148130 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G148130
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionMaturase
LocationCicolChr08: 10372840 .. 10373773 (+)
RNA-Seq ExpressionCcUC08G148130
SyntenyCcUC08G148130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGGCCCAAAGCCAATCCCGAGCCAAACAGGGAGTCTACTGGATGGGGTTCAACTAGCGGAGACTCTTGGAACTGCTGGAGTAAGAAGTTCCCAAGTGAGCGTATTATGGGGGACCGTCAAGCACATCCGGCAAGGATCAAGGGGGATCTCGTTGTTGCATAGCTCAGGTCGTAGCAACGCGCCATCGGACGTTCAACAGGCAGTTTCACGATCGGGCATGAGTGCCCGGAAGTTGTCATTGTATACTCCCGCGGGTCGGAAGGCGGCGGGGGAAGGAGGAGGACACTGGGCGGGATCTATCAGCAGCGAATTCCCCATACATCTCGAGGCGCCTATCAAAAAGATACTCCGAAGGCTTCGGGATCGAGGTATCATTAGCCGAAAAAGACCTTGGCCAATCCACGTGGCCTGCTTGACGAATGTCAGCGACGGAGGAGACTCTTATACCTGCACCCTCCGGAGCATGAACCATCTTTATGAGGGGGACAAGGAGGAGTCCACTGTATTTAACCTTAACCATCAACGAATGGTACCATTTAGAGCAAATTGGCAACGTTCTAACAGTTATCCGTCAACTAGCGGAGATTTCCGAGATGCTAGCACAATTGACCTTGAGGGCAAACATCGAAAAGCCCTGGCTTTTAAGTACTCATCTTACCGAACCCATAAAGACCCCAAGTGCTTGGGTAAGCAAGTAGTACGTCTTTCCACCAAGAAGATAGGGAGAAAAGGAAAAGCGCGCAGTCCCCTCTTTCCGCCTTCCTCGTTCCCCTGGACCTTCCCCGCAGAGTGCTTCCTCAGGGCTCGAACCTGCTGCAATGCACCAACTCCTCATTGTTGGACCAAATGAGACCTCCATAGAAGAAATTTTGTGGACTAATATGAACTACTCCTCACTTCGCAGACTTTCACGCTCACAAGGATTGGAACAG

mRNA sequence

AAAGGCCCAAAGCCAATCCCGAGCCAAACAGGGAGTCTACTGGATGGGGTTCAACTAGCGGAGACTCTTGGAACTGCTGGAGTAAGAAGTTCCCAAGTGAGCGTATTATGGGGGACCGTCAAGCACATCCGGCAAGGATCAAGGGGGATCTCGTTGTTGCATAGCTCAGGTCGTAGCAACGCGCCATCGGACGTTCAACAGGCAGTTTCACGATCGGGCATGAGTGCCCGGAAGTTGTCATTGTATACTCCCGCGGGTCGGAAGGCGGCGGGGGAAGGAGGAGGACACTGGGCGGGATCTATCAGCAGCGAATTCCCCATACATCTCGAGGCGCCTATCAAAAAGATACTCCGAAGGCTTCGGGATCGAGGTATCATTAGCCGAAAAAGACCTTGGCCAATCCACGTGGCCTGCTTGACGAATGTCAGCGACGGAGGAGACTCTTATACCTGCACCCTCCGGAGCATGAACCATCTTTATGAGGGGGACAAGGAGGAGTCCACTGTATTTAACCTTAACCATCAACGAATGGTACCATTTAGAGCAAATTGGCAACGTTCTAACAGTTATCCGTCAACTAGCGGAGATTTCCGAGATGCTAGCACAATTGACCTTGAGGGCAAACATCGAAAAGCCCTGGCTTTTAAGTACTCATCTTACCGAACCCATAAAGACCCCAAGTGCTTGGGTAAGCAAGTAGGAGAAAAGGAAAAGCGCGCAGTCCCCTCTTTCCGCCTTCCTCGTTCCCCTGGACCTTCCCCGCAGAGTGCTTCCTCAGGGCTCGAACCTGCTGCAATGCACCAACTCCTCATTGTTGGACCAAATGAGACCTCCATAGAAGAAATTTTGTGGACTAATATGAACTACTCCTCACTTCGCAGACTTTCACGCTCACAAGGATTGGAACAG

Coding sequence (CDS)

AAAGGCCCAAAGCCAATCCCGAGCCAAACAGGGAGTCTACTGGATGGGGTTCAACTAGCGGAGACTCTTGGAACTGCTGGAGTAAGAAGTTCCCAAGTGAGCGTATTATGGGGGACCGTCAAGCACATCCGGCAAGGATCAAGGGGGATCTCGTTGTTGCATAGCTCAGGTCGTAGCAACGCGCCATCGGACGTTCAACAGGCAGTTTCACGATCGGGCATGAGTGCCCGGAAGTTGTCATTGTATACTCCCGCGGGTCGGAAGGCGGCGGGGGAAGGAGGAGGACACTGGGCGGGATCTATCAGCAGCGAATTCCCCATACATCTCGAGGCGCCTATCAAAAAGATACTCCGAAGGCTTCGGGATCGAGGTATCATTAGCCGAAAAAGACCTTGGCCAATCCACGTGGCCTGCTTGACGAATGTCAGCGACGGAGGAGACTCTTATACCTGCACCCTCCGGAGCATGAACCATCTTTATGAGGGGGACAAGGAGGAGTCCACTGTATTTAACCTTAACCATCAACGAATGGTACCATTTAGAGCAAATTGGCAACGTTCTAACAGTTATCCGTCAACTAGCGGAGATTTCCGAGATGCTAGCACAATTGACCTTGAGGGCAAACATCGAAAAGCCCTGGCTTTTAAGTACTCATCTTACCGAACCCATAAAGACCCCAAGTGCTTGGGTAAGCAAGTAGGAGAAAAGGAAAAGCGCGCAGTCCCCTCTTTCCGCCTTCCTCGTTCCCCTGGACCTTCCCCGCAGAGTGCTTCCTCAGGGCTCGAACCTGCTGCAATGCACCAACTCCTCATTGTTGGACCAAATGAGACCTCCATAGAAGAAATTTTGTGGACTAATATGAACTACTCCTCACTTCGCAGACTTTCACGCTCACAAGGATTGGAACAG

Protein sequence

KGPKPIPSQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQAVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIISRKRPWPIHVACLTNVSDGGDSYTCTLRSMNHLYEGDKEESTVFNLNHQRMVPFRANWQRSNSYPSTSGDFRDASTIDLEGKHRKALAFKYSSYRTHKDPKCLGKQVGEKEKRAVPSFRLPRSPGPSPQSASSGLEPAAMHQLLIVGPNETSIEEILWTNMNYSSLRRLSRSQGLEQ
Homology
BLAST of CcUC08G148130 vs. NCBI nr
Match: YP_003587246.1 (maturase, partial [Citrullus lanatus] >ACV96636.1 maturase, partial [Citrullus lanatus])

HSP 1 Score: 271.2 bits (692), Expect = 1.1e-68
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           SQTGSLLDGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ
Sbjct: 438 SQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 497

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
           AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS
Sbjct: 498 AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 557

Query: 128 RKRPWPIHVACLTNVSDG 146
           R+RPWPIHVACLTNVSDG
Sbjct: 558 RRRPWPIHVACLTNVSDG 575

BLAST of CcUC08G148130 vs. NCBI nr
Match: ABY66693.1 (maturase, partial [Echinocystis lobata])

HSP 1 Score: 269.6 bits (688), Expect = 3.2e-68
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           SQTGSLLDGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ
Sbjct: 356 SQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 415

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
           AVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS
Sbjct: 416 AVSRSGMSVRKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 475

Query: 128 RKRPWPIHVACLTNVSDG 146
           R+RPWPIHVACLTNVSDG
Sbjct: 476 RRRPWPIHVACLTNVSDG 493

BLAST of CcUC08G148130 vs. NCBI nr
Match: ADK56489.1 (maturase, partial [Siraitia grosvenorii])

HSP 1 Score: 269.6 bits (688), Expect = 3.2e-68
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           SQTGSLLDGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ
Sbjct: 364 SQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 423

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
           AVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS
Sbjct: 424 AVSRSGMSVRKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 483

Query: 128 RKRPWPIHVACLTNVSDG 146
           R+RPWPIHVACLTNVSDG
Sbjct: 484 RRRPWPIHVACLTNVSDG 501

BLAST of CcUC08G148130 vs. NCBI nr
Match: YP_009913627.1 (maturase [Luffa acutangula] >QLJ93010.1 maturase [Luffa acutangula])

HSP 1 Score: 269.6 bits (688), Expect = 3.2e-68
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           SQTGSLLDGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ
Sbjct: 439 SQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 498

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
           AVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS
Sbjct: 499 AVSRSGMSVRKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 558

Query: 128 RKRPWPIHVACLTNVSDG 146
           R+RPWPIHVACLTNVSDG
Sbjct: 559 RRRPWPIHVACLTNVSDG 576

BLAST of CcUC08G148130 vs. NCBI nr
Match: ADK56491.1 (maturase, partial [Thladiantha lijiangensis])

HSP 1 Score: 269.6 bits (688), Expect = 3.2e-68
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           SQTGSLLDGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ
Sbjct: 364 SQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 423

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
           AVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS
Sbjct: 424 AVSRSGMSVRKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 483

Query: 128 RKRPWPIHVACLTNVSDG 146
           R+RPWPIHVACLTNVSDG
Sbjct: 484 RRRPWPIHVACLTNVSDG 501

BLAST of CcUC08G148130 vs. ExPASy TrEMBL
Match: D5I3B6 (Maturase (Fragment) OS=Citrullus lanatus OX=3654 GN=matR PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 5.4e-69
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           SQTGSLLDGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ
Sbjct: 438 SQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 497

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
           AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS
Sbjct: 498 AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 557

Query: 128 RKRPWPIHVACLTNVSDG 146
           R+RPWPIHVACLTNVSDG
Sbjct: 558 RRRPWPIHVACLTNVSDG 575

BLAST of CcUC08G148130 vs. ExPASy TrEMBL
Match: E2EZQ9 (Maturase (Fragment) OS=Thladiantha lijiangensis OX=866784 GN=matR PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           SQTGSLLDGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ
Sbjct: 364 SQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 423

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
           AVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS
Sbjct: 424 AVSRSGMSVRKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 483

Query: 128 RKRPWPIHVACLTNVSDG 146
           R+RPWPIHVACLTNVSDG
Sbjct: 484 RRRPWPIHVACLTNVSDG 501

BLAST of CcUC08G148130 vs. ExPASy TrEMBL
Match: A0A7D6C8J7 (Maturase OS=Luffa acutangula OX=56866 GN=matR PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           SQTGSLLDGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ
Sbjct: 439 SQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 498

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
           AVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS
Sbjct: 499 AVSRSGMSVRKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 558

Query: 128 RKRPWPIHVACLTNVSDG 146
           R+RPWPIHVACLTNVSDG
Sbjct: 559 RRRPWPIHVACLTNVSDG 576

BLAST of CcUC08G148130 vs. ExPASy TrEMBL
Match: B0FAE9 (Maturase (Fragment) OS=Echinocystis lobata OX=252533 GN=matR PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           SQTGSLLDGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ
Sbjct: 356 SQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 415

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
           AVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS
Sbjct: 416 AVSRSGMSVRKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 475

Query: 128 RKRPWPIHVACLTNVSDG 146
           R+RPWPIHVACLTNVSDG
Sbjct: 476 RRRPWPIHVACLTNVSDG 493

BLAST of CcUC08G148130 vs. ExPASy TrEMBL
Match: E2EZQ5 (Maturase (Fragment) OS=Momordica parvifolia OX=703381 GN=matR PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.6e-68
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           SQTGSLLDGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ
Sbjct: 364 SQTGSLLDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 423

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
           AVSRSGMS RKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS
Sbjct: 424 AVSRSGMSVRKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 483

Query: 128 RKRPWPIHVACLTNVSDG 146
           R+RPWPIHVACLTNVSDG
Sbjct: 484 RRRPWPIHVACLTNVSDG 501

BLAST of CcUC08G148130 vs. TAIR 10
Match: ATMG00520.1 (Intron maturase, type II family protein )

HSP 1 Score: 248.1 bits (632), Expect = 9.3e-66
Identity = 125/137 (91.24%), Postives = 128/137 (93.43%), Query Frame = 0

Query: 8   SQTGSLLDGVQLAETLGTAGVRSSQVSVLWGTVKHIRQGSRGISLLHSSGRSNAPSDVQQ 67
           S+TGSL DGVQLAETLGTAGVRS QVSVLWGTVKHIRQGSRGIS LHSSGRSNA SDVQQ
Sbjct: 434 SKTGSLQDGVQLAETLGTAGVRSPQVSVLWGTVKHIRQGSRGISFLHSSGRSNASSDVQQ 493

Query: 68  AVSRSGMSARKLSLYTPAGRKAAGEGGGHWAGSISSEFPIHLEAPIKKILRRLRDRGIIS 127
            VSRSG  ARKLSLYTP GRKAAGEGGGHWAGSISSEFPI +EAPIKKILRRLRDRGIIS
Sbjct: 494 VVSRSGTHARKLSLYTPPGRKAAGEGGGHWAGSISSEFPIKIEAPIKKILRRLRDRGIIS 553

Query: 128 RKRPWPIHVACLTNVSD 145
           R+RPWPIHVACLTNVSD
Sbjct: 554 RRRPWPIHVACLTNVSD 570

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
YP_003587246.11.1e-6898.55maturase, partial [Citrullus lanatus] >ACV96636.1 maturase, partial [Citrullus l... [more]
ABY66693.13.2e-6897.83maturase, partial [Echinocystis lobata][more]
ADK56489.13.2e-6897.83maturase, partial [Siraitia grosvenorii][more]
YP_009913627.13.2e-6897.83maturase [Luffa acutangula] >QLJ93010.1 maturase [Luffa acutangula][more]
ADK56491.13.2e-6897.83maturase, partial [Thladiantha lijiangensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
D5I3B65.4e-6998.55Maturase (Fragment) OS=Citrullus lanatus OX=3654 GN=matR PE=4 SV=1[more]
E2EZQ91.6e-6897.83Maturase (Fragment) OS=Thladiantha lijiangensis OX=866784 GN=matR PE=4 SV=1[more]
A0A7D6C8J71.6e-6897.83Maturase OS=Luffa acutangula OX=56866 GN=matR PE=4 SV=1[more]
B0FAE91.6e-6897.83Maturase (Fragment) OS=Echinocystis lobata OX=252533 GN=matR PE=4 SV=1[more]
E2EZQ51.6e-6897.83Maturase (Fragment) OS=Momordica parvifolia OX=703381 GN=matR PE=4 SV=1[more]
Match NameE-valueIdentityDescription
ATMG00520.19.3e-6691.24Intron maturase, type II family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 231..261
NoneNo IPR availablePANTHERPTHR33642COX1/OXI3 INTRON 1 PROTEIN-RELATEDcoord: 8..145
NoneNo IPR availablePANTHERPTHR33642:SF5MATURASEcoord: 8..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G148130.1CcUC08G148130.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000373 Group II intron splicing
biological_process GO:0090615 mitochondrial mRNA processing
biological_process GO:1900864 mitochondrial RNA modification
biological_process GO:0007005 mitochondrion organization
biological_process GO:0032885 regulation of polysaccharide biosynthetic process
biological_process GO:0009845 seed germination
cellular_component GO:0005739 mitochondrion