Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTATAAATTTTGTGTTCAAAACCCCATTTAGAATTGAAGTAGGAGAATCAATATTGGAGGCCAACTCAACGACAGTTGAAAGTACAATCTTGTGATGATATTGAAGAAAGTAAAAGAAAAATGTATGAAGCATTGAAGATTAGGTCAATTCAAAGCTTGAATACACAAATATCATTCAAAGAGTTTCTTTTGAATATGAAGCATGAACTTCCTGGTGAAGTTGATGCCCTTCAAAGGACATCTCTCCACTTAGTTTTGGCTAATGGAGAGGTTGAAGGTTGTTCAAGCTTTGCTTGAGAAGAGCACGAGCAGTTGCATGGTTCGTGATTTGAATGGCTTGATTCCCCTCTACCATGCAGTGATCAATGGCCAAATTCATGTTGTGGATGAAGCTTTCCAATGGCCGAACTATTTTTCATTTGTGTGTAAAAAACAATCATTTGGAGGCTTTAAAAAATGATAATAATTTTGGATTCAAATTGTGTAGATAGCAGGATACTTATTGTGATCAGCCCCAGGAATAATAACTGGAACTAATAGTAATAGTGTAAATAATGAGAAGGGATCATGTGAAAGTTCATCAAGTAGAATTGAAGAAGAATGTATTGAAGGATCATATACATCACCAACACCAAAAAACTTGATAACAAGTTTCTTAAAGAAGCTCCTTCAATACAAAGGTGGTTGGGTTCAAGCATTGATGTTGGTGGCAACCCGGATTGTTACAGTGGCTTTTCAAAGTGCCCTTTGGCAACAAGATATTTCTTTCAACTCCACTGTTGCTGTTTCTCATTCGTTTCGTAGTAGCGACACTTTGAAGACTTCCGTAGCTGGAACTGCAATAATGGCCTACCCAACTTCGGATCAAAAGAGATCGTTACTCACTTTACCTACTCACAAACTCTATCTCATTCTTTGCATCAATATGTGTTATTATGTTCATTATAAGTCGATTGCCTTTAAAGAATAG
mRNA sequence
ATGGCTTTGCTTGAGAAGAGCACGAGCAGTTGCATGGTTCGTGATTTGAATGGCTTGATTCCCCTCTACCATGCAGTGATCAATGGCCAAATTCATGTTGTGGATGAAGCTTTCCAATGGCCGAACTATTTTTCATTTGGATCATGTGAAAGTTCATCAAGTAGAATTGAAGAAGAATGTATTGAAGGATCATATACATCACCAACACCAAAAAACTTGATAACAAGTTTCTTAAAGAAGCTCCTTCAATACAAAGGTGGTTGGGTTCAAGCATTGATGTTGGTGGCAACCCGGATTGTTACAGTGGCTTTTCAAAGTGCCCTTTGGCAACAAGATATTTCTTTCAACTCCACTGTTGCTGTTTCTCATTCGTTTCGTAGTAGCGACACTTTGAAGACTTCCGTAGCTGGAACTGCAATAATGGCCTACCCAACTTCGGATCAAAAGAGATCGTTACTCACTTTACCTACTCACAAACTCTATCTCATTCTTTGCATCAATATGTGTTATTATGTTCATTATAAGTCGATTGCCTTTAAAGAATAG
Coding sequence (CDS)
ATGGCTTTGCTTGAGAAGAGCACGAGCAGTTGCATGGTTCGTGATTTGAATGGCTTGATTCCCCTCTACCATGCAGTGATCAATGGCCAAATTCATGTTGTGGATGAAGCTTTCCAATGGCCGAACTATTTTTCATTTGGATCATGTGAAAGTTCATCAAGTAGAATTGAAGAAGAATGTATTGAAGGATCATATACATCACCAACACCAAAAAACTTGATAACAAGTTTCTTAAAGAAGCTCCTTCAATACAAAGGTGGTTGGGTTCAAGCATTGATGTTGGTGGCAACCCGGATTGTTACAGTGGCTTTTCAAAGTGCCCTTTGGCAACAAGATATTTCTTTCAACTCCACTGTTGCTGTTTCTCATTCGTTTCGTAGTAGCGACACTTTGAAGACTTCCGTAGCTGGAACTGCAATAATGGCCTACCCAACTTCGGATCAAAAGAGATCGTTACTCACTTTACCTACTCACAAACTCTATCTCATTCTTTGCATCAATATGTGTTATTATGTTCATTATAAGTCGATTGCCTTTAAAGAATAG
Protein sequence
MALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVDEAFQWPNYFSFGSCESSSSRIEEECIEGSYTSPTPKNLITSFLKKLLQYKGGWVQALMLVATRIVTVAFQSALWQQDISFNSTVAVSHSFRSSDTLKTSVAGTAIMAYPTSDQKRSLLTLPTHKLYLILCINMCYYVHYKSIAFKE
Homology
BLAST of CcUC08G145740 vs. NCBI nr
Match:
XP_022925436.1 (uncharacterized protein LOC111432735 [Cucurbita moschata])
HSP 1 Score: 130.2 bits (326), Expect = 1.8e-26
Identity = 87/209 (41.63%), Postives = 108/209 (51.67%), Query Frame = 0
Query: 2 ALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVDEAF------QW--------------- 61
ALLEK+TS+CMVRDLNGLIPL+HAVING+I ++ W
Sbjct: 148 ALLEKNTSTCMVRDLNGLIPLHHAVINGRIDIIQRLIIARPRSPWVKLHNGQSALHLCIK 207
Query: 62 ----------------PNYFSF--------------GSCESSSSRIEEECIEGSYTSPTP 121
P F F E S SRIEE+C +GS TS T
Sbjct: 208 HNHLESLKLLIIMIEDPQNFGFLNQVNENENTILDLSITEGSPSRIEEQCNKGSSTSATL 267
Query: 122 KNLITSFLKKLLQYKGGWVQ----ALMLVATRIVTVAFQSAL------WQQDISFNSTVA 150
K L+ S K L+YKG W+Q +MLVAT I TVAFQ A+ WQ+DIS+NS +
Sbjct: 268 KKLLRSLWMKNLKYKGDWLQEVQGTMMLVATVIATVAFQGAINPPGGVWQEDISYNSNSS 327
BLAST of CcUC08G145740 vs. NCBI nr
Match:
XP_022973933.1 (uncharacterized protein LOC111472564 [Cucurbita maxima])
HSP 1 Score: 122.5 bits (306), Expect = 3.8e-24
Identity = 87/239 (36.40%), Postives = 111/239 (46.44%), Query Frame = 0
Query: 2 ALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVD-------------------------- 61
ALLEK+TS+CMVRDL+GLIPL+HAVING+I ++
Sbjct: 40 ALLEKNTSTCMVRDLHGLIPLHHAVINGRIDIMPLLINARPQSLWMKLHNGQTVLHLCVM 99
Query: 62 -------------------------------------------EAFQW------------ 121
E Q+
Sbjct: 100 HNHLEALKLLITMIEDHQDYGFLNEGDENENTILDLSMMLRQIEIVQYLLSIKGIKTGTN 159
Query: 122 -PNYFSFGSCESSSSRIEEECIEGSYTSPTPKNLITSFLKKLLQYKGGWVQ----ALMLV 149
N ++ + + S +RIEE C +G TSP PKNL+TS LK L+YKG W Q +MLV
Sbjct: 160 TTNNYAASNEKGSPNRIEEPCYDGLSTSPPPKNLMTSSLKSKLEYKGDWFQEVQGTMMLV 219
BLAST of CcUC08G145740 vs. NCBI nr
Match:
XP_022925435.1 (uncharacterized protein LOC111432732 [Cucurbita moschata])
HSP 1 Score: 117.5 bits (293), Expect = 1.2e-22
Identity = 89/217 (41.01%), Postives = 108/217 (49.77%), Query Frame = 0
Query: 2 ALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVD-------------------------- 61
ALLEK+TSSCMVRDLNGLIPL+HAVING+I ++
Sbjct: 40 ALLEKNTSSCMVRDLNGLIPLHHAVINGRIDIMPLLINARPQSLWMKLHNGQTVLHLCVM 99
Query: 62 --------------EAFQWPNYFSFGSCESSS--------SRIEEE----CIEG------ 121
E Q + + G ++ RIE I+G
Sbjct: 100 HNHLEALKLLITMIEDQQHYGFLNEGDENENTILDLSMMLRRIEIVQYLLSIKGIKTRTN 159
Query: 122 --SYTSPTPKNLITSFLKKLLQYKGGWVQ----ALMLVATRIVTVAFQSAL------WQQ 149
TSP PKNL+TS LK L+YKG W Q +MLVAT I TVAFQ A+ WQ+
Sbjct: 160 TTKSTSPPPKNLMTSSLKSKLEYKGDWFQEVHGTMMLVATVIATVAFQGAINPPGGVWQE 219
BLAST of CcUC08G145740 vs. NCBI nr
Match:
XP_022925440.1 (ankyrin repeat domain-containing protein 16-like [Cucurbita moschata])
HSP 1 Score: 116.3 bits (290), Expect = 2.7e-22
Identity = 90/242 (37.19%), Postives = 110/242 (45.45%), Query Frame = 0
Query: 2 ALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVD-------------------------- 61
ALLEK+TS+CMVRDLNGLIPL+HAVINGQI ++
Sbjct: 70 ALLEKNTSTCMVRDLNGLIPLHHAVINGQIDIIPLLINARPRSPWIKLHNGQSVLHLCVK 129
Query: 62 ----EAFQW-------PNYFSF-------------------------------------- 121
EA + P + F
Sbjct: 130 HNHLEALKLLITMIEDPQDYGFLNQGDENENTILDFSMMLRRIEIVQYLLSIPGIKTGTN 189
Query: 122 --GSCESSS-----SRIEEECIEGSYTSPTPKNLITSFLKKLLQYKGGWVQ----ALMLV 152
+C +S+ SRIEE+C + + S T K I S K L+YKG W Q +MLV
Sbjct: 190 TKNNCATSNEKGSPSRIEEQCDKKASISLTLKTFIRSLWMKNLEYKGDWFQEVQGTMMLV 249
BLAST of CcUC08G145740 vs. NCBI nr
Match:
XP_023521954.1 (ankyrin repeat-containing protein At5g02620-like, partial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 110.5 bits (275), Expect = 1.5e-20
Identity = 86/242 (35.54%), Postives = 110/242 (45.45%), Query Frame = 0
Query: 2 ALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVD-------------------------- 61
ALLEK+TS+CMVRDLNGLIPL+HAVING+I ++
Sbjct: 109 ALLEKNTSTCMVRDLNGLIPLHHAVINGRIDIMQRLIIARSRSPWIKLHNGQTVLHLCIK 168
Query: 62 ----EAFQW-------PNYFSF-------------------------------------- 121
EA ++ P + F
Sbjct: 169 YNHLEALKFFITMIKDPQDYGFLNQGDENENTILDFSMMLRRIEIVQYLLSFPGIKTGTN 228
Query: 122 --GSCESSS-----SRIEEECIEGSYTSPTPKNLITSFLKKLLQYKGGWVQ----ALMLV 152
+C +S+ SR +E+C + S T + I S K L+YKG W Q +MLV
Sbjct: 229 TAKNCATSNEKESPSRTQEQCDKKLSISLTFRKFIRSLWMKNLEYKGDWFQDVQGTMMLV 288
BLAST of CcUC08G145740 vs. ExPASy TrEMBL
Match:
A0A6J1EC78 (uncharacterized protein LOC111432735 OS=Cucurbita moschata OX=3662 GN=LOC111432735 PE=4 SV=1)
HSP 1 Score: 130.2 bits (326), Expect = 8.8e-27
Identity = 87/209 (41.63%), Postives = 108/209 (51.67%), Query Frame = 0
Query: 2 ALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVDEAF------QW--------------- 61
ALLEK+TS+CMVRDLNGLIPL+HAVING+I ++ W
Sbjct: 148 ALLEKNTSTCMVRDLNGLIPLHHAVINGRIDIIQRLIIARPRSPWVKLHNGQSALHLCIK 207
Query: 62 ----------------PNYFSF--------------GSCESSSSRIEEECIEGSYTSPTP 121
P F F E S SRIEE+C +GS TS T
Sbjct: 208 HNHLESLKLLIIMIEDPQNFGFLNQVNENENTILDLSITEGSPSRIEEQCNKGSSTSATL 267
Query: 122 KNLITSFLKKLLQYKGGWVQ----ALMLVATRIVTVAFQSAL------WQQDISFNSTVA 150
K L+ S K L+YKG W+Q +MLVAT I TVAFQ A+ WQ+DIS+NS +
Sbjct: 268 KKLLRSLWMKNLKYKGDWLQEVQGTMMLVATVIATVAFQGAINPPGGVWQEDISYNSNSS 327
BLAST of CcUC08G145740 vs. ExPASy TrEMBL
Match:
A0A6J1IEM9 (uncharacterized protein LOC111472564 OS=Cucurbita maxima OX=3661 GN=LOC111472564 PE=4 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 1.8e-24
Identity = 87/239 (36.40%), Postives = 111/239 (46.44%), Query Frame = 0
Query: 2 ALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVD-------------------------- 61
ALLEK+TS+CMVRDL+GLIPL+HAVING+I ++
Sbjct: 40 ALLEKNTSTCMVRDLHGLIPLHHAVINGRIDIMPLLINARPQSLWMKLHNGQTVLHLCVM 99
Query: 62 -------------------------------------------EAFQW------------ 121
E Q+
Sbjct: 100 HNHLEALKLLITMIEDHQDYGFLNEGDENENTILDLSMMLRQIEIVQYLLSIKGIKTGTN 159
Query: 122 -PNYFSFGSCESSSSRIEEECIEGSYTSPTPKNLITSFLKKLLQYKGGWVQ----ALMLV 149
N ++ + + S +RIEE C +G TSP PKNL+TS LK L+YKG W Q +MLV
Sbjct: 160 TTNNYAASNEKGSPNRIEEPCYDGLSTSPPPKNLMTSSLKSKLEYKGDWFQEVQGTMMLV 219
BLAST of CcUC08G145740 vs. ExPASy TrEMBL
Match:
A0A6J1EHY8 (uncharacterized protein LOC111432732 OS=Cucurbita moschata OX=3662 GN=LOC111432732 PE=4 SV=1)
HSP 1 Score: 117.5 bits (293), Expect = 5.9e-23
Identity = 89/217 (41.01%), Postives = 108/217 (49.77%), Query Frame = 0
Query: 2 ALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVD-------------------------- 61
ALLEK+TSSCMVRDLNGLIPL+HAVING+I ++
Sbjct: 40 ALLEKNTSSCMVRDLNGLIPLHHAVINGRIDIMPLLINARPQSLWMKLHNGQTVLHLCVM 99
Query: 62 --------------EAFQWPNYFSFGSCESSS--------SRIEEE----CIEG------ 121
E Q + + G ++ RIE I+G
Sbjct: 100 HNHLEALKLLITMIEDQQHYGFLNEGDENENTILDLSMMLRRIEIVQYLLSIKGIKTRTN 159
Query: 122 --SYTSPTPKNLITSFLKKLLQYKGGWVQ----ALMLVATRIVTVAFQSAL------WQQ 149
TSP PKNL+TS LK L+YKG W Q +MLVAT I TVAFQ A+ WQ+
Sbjct: 160 TTKSTSPPPKNLMTSSLKSKLEYKGDWFQEVHGTMMLVATVIATVAFQGAINPPGGVWQE 219
BLAST of CcUC08G145740 vs. ExPASy TrEMBL
Match:
A0A6J1EHZ5 (ankyrin repeat domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111432739 PE=4 SV=1)
HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 90/242 (37.19%), Postives = 110/242 (45.45%), Query Frame = 0
Query: 2 ALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVD-------------------------- 61
ALLEK+TS+CMVRDLNGLIPL+HAVINGQI ++
Sbjct: 70 ALLEKNTSTCMVRDLNGLIPLHHAVINGQIDIIPLLINARPRSPWIKLHNGQSVLHLCVK 129
Query: 62 ----EAFQW-------PNYFSF-------------------------------------- 121
EA + P + F
Sbjct: 130 HNHLEALKLLITMIEDPQDYGFLNQGDENENTILDFSMMLRRIEIVQYLLSIPGIKTGTN 189
Query: 122 --GSCESSS-----SRIEEECIEGSYTSPTPKNLITSFLKKLLQYKGGWVQ----ALMLV 152
+C +S+ SRIEE+C + + S T K I S K L+YKG W Q +MLV
Sbjct: 190 TKNNCATSNEKGSPSRIEEQCDKKASISLTLKTFIRSLWMKNLEYKGDWFQEVQGTMMLV 249
BLAST of CcUC08G145740 vs. ExPASy TrEMBL
Match:
A0A6J1D887 (ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LOC111018270 PE=4 SV=1)
HSP 1 Score: 107.5 bits (267), Expect = 6.1e-20
Identity = 84/257 (32.68%), Postives = 106/257 (41.25%), Query Frame = 0
Query: 2 ALLEKSTSSCMVRDLNGLIPLYHAVINGQIHVVDEAFQ------WPNYF----------- 61
ALLEK+TS+C+VRDLNGLIPL+HAVI+GQI ++ E W
Sbjct: 122 ALLEKNTSACLVRDLNGLIPLHHAVISGQIEIMQELIHARPQSVWTKLHNGQTVLHLCAK 181
Query: 62 ------------------------------------------------------------ 121
Sbjct: 182 DNHLEAIEMLIKTLKIHNDEEFLNTVDNSDNTVLDLSLMLRQIEIVRYLLSIPGIKVGTS 241
Query: 122 ----------SFGSCESSS-------SRIEEECIEGSYTSPTPKNLITSFLKKLLQYKGG 155
+ SC+S S SR+ E+CIE S T T K L+ S KK L+YKG
Sbjct: 242 MMSSCVASNGNGSSCQSLSCRIDQDVSRVREQCIEASSTCATSKKLMKSSWKKHLKYKGD 301
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022925436.1 | 1.8e-26 | 41.63 | uncharacterized protein LOC111432735 [Cucurbita moschata] | [more] |
| XP_022973933.1 | 3.8e-24 | 36.40 | uncharacterized protein LOC111472564 [Cucurbita maxima] | [more] |
| XP_022925435.1 | 1.2e-22 | 41.01 | uncharacterized protein LOC111432732 [Cucurbita moschata] | [more] |
| XP_022925440.1 | 2.7e-22 | 37.19 | ankyrin repeat domain-containing protein 16-like [Cucurbita moschata] | [more] |
| XP_023521954.1 | 1.5e-20 | 35.54 | ankyrin repeat-containing protein At5g02620-like, partial [Cucurbita pepo subsp.... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1EC78 | 8.8e-27 | 41.63 | uncharacterized protein LOC111432735 OS=Cucurbita moschata OX=3662 GN=LOC1114327... | [more] |
| A0A6J1IEM9 | 1.8e-24 | 36.40 | uncharacterized protein LOC111472564 OS=Cucurbita maxima OX=3661 GN=LOC111472564... | [more] |
| A0A6J1EHY8 | 5.9e-23 | 41.01 | uncharacterized protein LOC111432732 OS=Cucurbita moschata OX=3662 GN=LOC1114327... | [more] |
| A0A6J1EHZ5 | 1.3e-22 | 37.19 | ankyrin repeat domain-containing protein 16-like OS=Cucurbita moschata OX=3662 G... | [more] |
| A0A6J1D887 | 6.1e-20 | 32.68 | ankyrin repeat-containing protein NPR4-like OS=Momordica charantia OX=3673 GN=LO... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
