CcUC07G144750 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G144750
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr07: 30891697 .. 30895419 (-)
RNA-Seq Expression	CcUC07G144750
Synteny	CcUC07G144750

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTCTGCAAAAATATTGGATGGAAAGTTTGTGTAGAGGATATGGATGTTCATGTTTTCAAGATGAAGCTTTGCATCAATCATGTTCCTGGACTAATCATATGGAAAATGTACCTGTTTCGGTTTTGCTTTTGCTTTTGTTACTTCTAGAAATTATTGAAAGATTTGAAATTATAAGTCAAAACCAACTCAATGAATAGATGGTGTTATTGACAAGTAACCATATTTGTTGGGCTACTTCAACCATGCATCTTTCCTACTCTAAAACTGAAAAACTGGGACGTTTGACTTTTGCCCAGCATTGGATAAAAAAAATAAATAAATTGTTTTGTTGTTTGAACTTTTGTCACTCCAACATATTTTGTTTTGAAGAAAATGTATTATGAACTTACTATGAAATTTTCTTATTGAGTATTTTTGTACTCAGCTTTGTTTTTCAAAATGTGTTTAGAGAAAGTGCAAGCAATAGTTCTGACAGCGATTGAAGGATTAGCATTATGGCATAATGCGAGAATGTGTTCAGACATTTAAGTATTTGTTTTTCTCGTAAAGTTTTCGTAAAGTTCTGATCAACACTCTACAAGAAAAGTGATAGAGAGCTAATTCCTTCCCGAGTAGTTTGAACTTACCAAGAAGGAAGCTCTCTGTGACTTTTTCCGTAAAGTGGTAAAGTATACACTTTACAGGAAAGGTCACCGAACACATTTCCTTCCTGGTAAAGTCACCGAACATATTTACTTCCTGGTAAGTTCTCCTCGCATCTACCTACAAAGTTCAAACTCACCCTTCTTTTCTCTTTTCATTTCGAAAGTCCAAGTGTTCAATTTTTTTAAAAAAAACAACAGCTTTATTCATTTGAGGTCCATTACTTAGCAGAAATCGTGGTTCTTTTTCATAATGGATTTGACAGAAACCCAGGTTCAAAATAGTTAAAGTCTATCGTGTCTTTTTATAACCCTAATAGAAATCACACAAAAAAACCCCTCCAACACTCCAACATATTTCAATGCAAGCGTTGGAAAAAAAAAACCTTGAAATAGAATCTAAACAGAGTACCTTTGTTGAAATGGAAGGTACTCGTGTAGAATCCAACCAATGAAGCGTTTTTTAGAGAGGAAGGGGCAGAGGGAATTAATAAGGACAAAAACACCCTTTCACATTGTGGGGCCCTCCACTAAAAAGTCGAAAAGGTTTGAGGGCGAAGACAGAATGGGTATTTATTTAAAATTTGAGTGTAGAATGGGGAGCGAAAAATTCTCTACTTATATGCCCATTTAATATAATGGAGATTTTATACACAATTCTAATTCAGGCAACACCAGCGAGTAGCTTTTTGTGAGATTTGAATGGTACAATATATATGATAGATAGACATCATGGCTACCTCAAAGTTCTTTGGTGTTAAAAGTAAGAATTTTTCTTGGCATGACTCATACTCATACATCATCCATGATGCTTTGGGCTAATGAGGATTGCAGGTTGTCTAGAAGCACAAACAAAAAGCGAAACCATTCGTATGCTAGCCTTGTTGTTCACTATACCTATTAATATTGAAGAAAGCTAAATGCAAGAAATGAAATACCATTCCTATAGAACTAGCAAGTCTAGCATATGAGCCTTAACGGAAAAGACAAAGTGAAAAAAAAAACGTATCAAAGAGAATATAGAAGTGGAGATGGAGATCGAGGTAGTTTTAAATTATACCTGGTTTGTAAAACCAACCACAACTCCAAGCAATATCCAACTGTACAGATTAAAAGCTTTCACCAGCAATAGATGTAGCGACATAGGATTTTCTAACTGTAAAGAGATTCCAGAAAGTATACAATCTTCATCTACATTGTTTGTTACTTTTCTGATGCCATCATCTATTCATGCTCCTATTAGGTTGTTTAGCAAGAAAACCAAACCTAGAACTCCAATGTCATAGCCAAACAATATGAAGACGGGAGAAGCCCAAAGGCAGGAGGAGCTGAGGCATCTAGTTATTGTCTTGCTCGTTCCATGTCAAGTTTATGAATCTTGGAGTTTCTGCACTTCTGTTGCTCACATGATGAAGCAAGTCAAAATTAGGAAGATATTGTGTGGCCATACAACTTTGTTCTATCATTACGTCCAGCAAAATGTTTTGCTTTTCGACACAGAAAGGAAAACTAATTCAATCACCAGAATTAGTTCATCTATAGTAAGTGAAAAGATGCTTTAATATAGATGCTGATATGCCTCCCAAAGCGAACTATCTTATTCTGTTTCCTTTTTTTTTTTTTTCCAACTTAGAACATCACTGTGCCTCGTTGTTGAAGGTTGTCTCTCGACCCGGTTTCTCTTCCAAAACCAATTCTCCATCCAAATTCTATCCATCTGCTCAATGGGAATATTCTTCGTCTCCGGTAAGAAAAGCAACACAAAGACAGTCATAATCAAAACCCACCCACCCACCAAAGAAGAAAAAAGTGCCACTTTTCAAGTGACAAAGCATAGATAGAAAACTCTGAGCTATGGCGAAAGTAAAGAGAAAATTTGCAGCCACAGTAATACTCTGTCCAGCAAATCTAATCTCCAACTGAAAAATCTCACTTGGAACCAACCAACCAAGAGGACCCCAAGACCACGCAAAACCAGCAACGTATACGCATATCAAAACAAGAACCAAATATGCATACCCTTTGCTCAGCCCACCATGATCGCCTAGTTTAGCAGCCGTTACACTCCCAATTACAATCTGCGAGATAAACATTTGAACTCTTCGGCCAAATTTGTCCACTATAAGCATTGAAATGAACGTCGCTATAGTACCCACAACCCCAGTCACGACAGCCGACAACAGTGAAGCACTTTCATCTAAACCAACAGTTCTAAAAAGAATCGGCGCATAGAATGAAATGACATTGATACCAGTTACTTGTTGGAAAAACTGTATCGCTATCGCCATCACAAGTTGAGGCCTATCTTCCGTCGAGTAATTTTCACGAACGGTTTCTTCATTGTCTTCAAAATTGCATTTGCTTTCACAAGATCATCAAATTCCACGTCAACATCATCTGTTCCACGGATCCGCCGCAGCATCTTCATGGCCTTTAGCTGTTCATCGCAGCGTTGAATCAGGCTATTGGGTGTCTCGGGTAAGAAAATCGAACCGAAGGTCAAAAGCAAGGCGGGAACTCCAGCCAAAGCCAAGGAAATTCGCCAGCCTGAGCTGTTCTTGAGTTTCTCGGTTCCATAGTTGATGAGATTAGCCGATAGAACGCCAATTCAATGCAGAACTAGTTGGAAGCCATTGTTGATTGCTTCCCTGTATTTAGGCGGTGCCATTTCCGAGAGATACAAAGGAATCGCCTGATGAAAAAATGATCATAATTCCTAATATTATTCTCAAACAAACCACTGGAGAAGCAAGCAGAGTTAGAAAAGAAGCCTGATTAGTAAAGCCAACGCCGATTCCGAGCAATATGCGGCCAAGAAGAAGCATGTAGACGTTGGCGGCCGCCCTGCCCAAGGCAGCGCCGGCGAGAAAAGCGGCGCCGCCGGCGAGAATGGAGGGCTTTCTTCCGAAGGCTCTGGTGACGGAGGAAGCAAAGAAGGTGAAAAGAAGGCCGGCAATGTACAGGGAAGATGTGAAGGAGGTCAAGAGTTGGCTGTCGAATTTGCAGTAGTTGCTTATTTCTGTATCCTTTTTCATCTTTTTGTTTACTTCTGGGAAAAATTTCTTCAGAAATGGCTCCAT

mRNA sequence

GCTTCTGCAAAAATATTGGATGGAAAGTTTGTGTAGAGGATATGGATGTTCATGTTTTCAAGATGAAGCTTTGCATCAATCATGTTCCTGGACTAATCATATGGAAAATGTACCTGTTTCGATAGACATCATGGCTACCTCAAAGTTCTTTGGTGTTAAAAAACATCACTGTGCCTCGTTGTTGAAGGTTGTCTCTCGACCCGGTTTCTCTTCCAAAACCAATTCTCCATCCAAATTCTATCCATCTGCTCAATGGGAATATTCTTCGTCTCCGAAAACTCTGAGCTATGGCGAAAGTAAAGAGAAAATTTGCAGCCACAGTAATACTCTGTCCAGCAAATCTAATCTCCAACTGAAAAATCTCACTTGGAACCAACCAACCAAGAGGACCCCAAGACCACGCAAAACCAGCAACTTACTTGTTGGAAAAACTGTATCGCTATCGCCATCACAAGTTGAGGCCTATCTTCCGTCGAATCATCAAATTCCACGTCAACATCATCTGTTCCACGGATCCGCCGCAGCATCTTCATGGCCTTTAGCTGTTCATCGCAGCGTTGAATCAGGCTATTGGGTGTCTCGGGCGGTGCCATTTCCGAGAGATACAAAGGAATCGCCTGATGAAAAAATGATCATAATTCCTAATATTATTCTCAAACAAACCACTGGAGAAGCAAGCAGAAAAAGAAGCCTGATTAGTAAAGCCAACGCCGATTCCGAGCAATATGCGGCCAAGAAGAAGCATGTAGACGTTGGCGGCCGCCCTGCCCAAGGCAGCGCCGGCGAGAAAAGCGGCGCCGCCGGCGAGAATGGAGGGCTTTCTTCCGAAGGCTCTGGTGACGGAGGAAGCAAAGAAGGTGAAAAGAAGGCCGGCAATGTACAGGGAAGATGTGAAGGAGGTCAAGAGTTGGCTGTCGAATTTGCAGTAGTTGCTTATTTCTGTATCCTTTTTCATCTTTTTGTTTACTTCTGGGAAAAATTTCTTCAGAAATGGCTCCAT

Coding sequence (CDS)

ATGGAAAGTTTGTGTAGAGGATATGGATGTTCATGTTTTCAAGATGAAGCTTTGCATCAATCATGTTCCTGGACTAATCATATGGAAAATGTACCTGTTTCGATAGACATCATGGCTACCTCAAAGTTCTTTGGTGTTAAAAAACATCACTGTGCCTCGTTGTTGAAGGTTGTCTCTCGACCCGGTTTCTCTTCCAAAACCAATTCTCCATCCAAATTCTATCCATCTGCTCAATGGGAATATTCTTCGTCTCCGAAAACTCTGAGCTATGGCGAAAGTAAAGAGAAAATTTGCAGCCACAGTAATACTCTGTCCAGCAAATCTAATCTCCAACTGAAAAATCTCACTTGGAACCAACCAACCAAGAGGACCCCAAGACCACGCAAAACCAGCAACTTACTTGTTGGAAAAACTGTATCGCTATCGCCATCACAAGTTGAGGCCTATCTTCCGTCGAATCATCAAATTCCACGTCAACATCATCTGTTCCACGGATCCGCCGCAGCATCTTCATGGCCTTTAGCTGTTCATCGCAGCGTTGAATCAGGCTATTGGGTGTCTCGGGCGGTGCCATTTCCGAGAGATACAAAGGAATCGCCTGATGAAAAAATGATCATAATTCCTAATATTATTCTCAAACAAACCACTGGAGAAGCAAGCAGAAAAAGAAGCCTGATTAGTAAAGCCAACGCCGATTCCGAGCAATATGCGGCCAAGAAGAAGCATGTAGACGTTGGCGGCCGCCCTGCCCAAGGCAGCGCCGGCGAGAAAAGCGGCGCCGCCGGCGAGAATGGAGGGCTTTCTTCCGAAGGCTCTGGTGACGGAGGAAGCAAAGAAGGTGAAAAGAAGGCCGGCAATGTACAGGGAAGATGTGAAGGAGGTCAAGAGTTGGCTGTCGAATTTGCAGTAGTTGCTTATTTCTGTATCCTTTTTCATCTTTTTGTTTACTTCTGGGAAAAATTTCTTCAGAAATGGCTCCAT

Protein sequence

MESLCRGYGCSCFQDEALHQSCSWTNHMENVPVSIDIMATSKFFGVKKHHCASLLKVVSRPGFSSKTNSPSKFYPSAQWEYSSSPKTLSYGESKEKICSHSNTLSSKSNLQLKNLTWNQPTKRTPRPRKTSNLLVGKTVSLSPSQVEAYLPSNHQIPRQHHLFHGSAAASSWPLAVHRSVESGYWVSRAVPFPRDTKESPDEKMIIIPNIILKQTTGEASRKRSLISKANADSEQYAAKKKHVDVGGRPAQGSAGEKSGAAGENGGLSSEGSGDGGSKEGEKKAGNVQGRCEGGQELAVEFAVVAYFCILFHLFVYFWEKFLQKWLH

Homology

[Close]

BLAST of CcUC07G144750 vs. ExPASy TrEMBL
Match: A0A0E0GFI1 (Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.4e-06
Identity = 45/104 (43.27%), Postives = 68/104 (65.38%), Query Frame = 0


Query: 225 LISKANADSEQYAAKKKHVDVGGRPAQGSAGEKSGAAGENGGLSSEGSGDGGSKEGEKKA 284
           L+ +A +++EQ   + +HVDV    A+  AG++ GAA E GG ++E  GDGG  E   +A
Sbjct: 269 LVGEAESNAEQDPVEDEHVDVDSGAAEDGAGDEDGAADEYGGTAAEAPGDGGGDESGDEA 328

Query: 285 GNVQGRCEGGQELAVEFAVVAYFCIL-FHLFVYFWEKFLQKWLH 328
           G+V+G  E G+ELAV+ AVVA+  ++  HL V+  E+ LQ+ LH
Sbjct: 329 GDVEGGGEDGEELAVKAAVVAHLLLVPLHLMVHVREELLQERLH 372

The following BLAST results are available for this feature:

BLAST of CcUC07G144750 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC07G144750 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC07G144750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0E0GFI1	1.4e-06	43.27	Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1	[more]

BLAST of CcUC07G144750 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G144750.1	CcUC07G144750.1	mRNA