CcUC07G143530 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G143530
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribonuclease
Location	CicolChr07: 29683787 .. 29688088 (+)
RNA-Seq Expression	CcUC07G143530
Synteny	CcUC07G143530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCTTATCTAAGTTTGTTAAAAAATTTCAACAAAAATTCACAATATTATTATAGACTTTGTGATGTAAGTGATTTTTCATAGAATATTAGTTGATATTTAAATATCTATCAACATATCCGTAAATTAGGGTTACTAATATCTACCCAGATAACTATATGTTCGTCCTTGCTTGTGCTCTATTCTCATGTTGCTAATGCTTGACGTCGTTGCCATAGTTGTCGTTTAAGCGGGAAGCTACTAAAAGAATAAAAGAAAATTGCAAAATGAATAATGTCCAACTTTTTAAAAAACAATAGTAATTGACATGTTATAACCACGTGAAGCTACGAATTCGCCCTTCCTCCCGAGAATGAACACGAAAGAGTGAGAGAAAGGGAGAGATGAAAGCAATTTTTGAGGGAGAAGAGAACAAGAGAACGAGAGTAAGAGATAAAAAGAATACTAAAGAAAGGGAAAGAGAAAGCGAGAGTGAGAAACTCGAATTTGACGTAAACCTCCTTTAGTCATTTCCCCCCAAATTTGGTTAATCCATCCGGCGGACCCAAAGAGTCAGAACCAAAGGAGCTTCCATGGCGGGATCGACCTAAACGAAGTGAACTCACAATCGAAGAAACACTCAAGTAAAGAGAGGAAGAGAGATTCTCTTCTAAACCGACGTAGCGACTAGCGAGTAGAAATCAGCAATGTCTTCGCAAGATCCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCCGTTTTAGGTTTTCTATGTTCTTATTCGTTTCGTTCCATTTCGGCCTCTTTAATTCCGCTTTCGTCATCACATTTTGGGATAGGATTTTGGATACTCTTTTCTTTCTCAAATATTACTGCGTTTGATCTCAGGGCCAATGGTGTATGGATGCTTGTACTGCGCTACTTCCTATTTGATAGAACTTTCGTCTTTGAATTTTGCAGGTTTAGCTTCTTTGCAATTTTTTTGCTTCTATGGATTTTCTTTTAACTGTTGTTCATCATTTACCTATTTCGTTTACTTCTCTTCCAACTTTTGATGTTTTGCATTTAGACTCAAAAACTTTGAGAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGATGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTAAATAAGTCAGTCTTTAGTGGTTTATATATTCTTTCATTTGCATAAATACTCTAATGCACTTTACCTATTGAATTCGACGGTATAGAGAATGTAACTTAGCTTTAGTCGATAATAGGTAAACTTTATATACATCGGTACATGCATTGATCTTATTAATTCACCACTACACCCAAAAACTCAAAAACTTAAAGTTGATTGATTAAGATAAATTTAGTATTTTTTTTTTTTAGTATTTCTTTTAACTAATGGGAGGTAAGCAAACCTATCTTCATTCAGAGCTAGGATCTCAGCAAAAGACTGAAACATGAATAATGATGCTTTCCCTCCCCCTTCTATTTTTGTTAACTTGTGCACATCAAAGGGTGGGTGACTATGTTGGACTAAAGTATTTTTTATTTTTCACTTTATTGGTCAACAGAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCCATGGGTCTGGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGGTAACTCTCTCCCTGGTTTCTTCATTAATTGATGAAAAGAAACTAAAATTTTTAAGGATAAAACTAACAAGAGAAGTCCAATGCTTGGCCTCTGGTAACTTCCAATTATCTTACGTCATGATTCTATTGACATCATTTAGAGAAGAGAGAGCATGTGGAATCTTGAACTTCATATGGTATCATTTCGCATGTTCTTTTGGGAGGGAAAAATATAAATTAAAAAAAGAAATCAAACTACAGATTATTTTCAATGCCTTTTTATTGTTAATTATAGATCTACACCAAAGTCAACGAGAATGTAAATGAACCAGTTTCATATCTTGATTACAGTAGTACGGTATGACACATTCTTTTTGAGGAAGATCTGTAAGAATTAAATTTTGGAAAATTTATATTCTTGATCTTTTCAGGTCCATAAGCTAGAGGGAAAGACCATCCCCATGACGCATATCTCATCTTTCATTGCCTTAGATTAATCATTTCCATTTATTTTCAGGTCTATGTGGATACTGTTGGAGATTCTGAAAAGTACAGAATTAAGTTGTCTGAGAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTAATTCTAATGCTTCCTTTTAAGATATAGGATTCCAACTGTTTCGCACACTTAAATTCAACAATTTGACTTGTAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACGGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGGTCAATTTCATCCGCTAAATATTTTTTGCAGCATACTAATCAGATTTTCATTGCACAGGGTGAAATCAATAATGCTTTTATGATTTAATCTATAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACGTTAGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACGTCGTTGAAGTATTATGGTTAGTTTTTACTCTGCCTTGTAAGAACTGTAGTTCTTTGCAGAATTAGCTTATTAAGCCACATACAATTTCTTTAATGTTCTCCACAGTATAGAAAGGACAGGCTTTTGTTCTGATCTCTTTGCCTCATGATACCATTCTTCATGATGGACGTGGTGTAAATTCTCCTCTTATTTTTGTGATTATATCCTTGCATCTCTTATAGCACATTGGAATTGTTTTTGTAAATCATTTGACATGTTTTGTCATATTTTGTAATTTTATCTCATCAAGTAATGAGGATAATTAGTTCATTTAAAAAAAAAGATGGACGAATTGCATACTTTTCAAAAATATTTTCACAACAATCGAATTATCAGTAATTTATTTAAAAAAGCCAGACCACTTTAAAAATTGTTAAAGTATTCTTGTCCAAAAAGTATTCTTGTCTTAAAATGCTTTAGTTGGTGGTGGGGGGATTGATTTAGTGAAAGCACACTTAAAATATGTTTGAAAATCATATGGAATTTAGTAATTAATGATAGACAATTTTTTTTATTTTTTTTATTTTTTATTTTTTTATTAATGTAGTGCACTTCTCATTTTTGCTGGAACATCATCCTGCTCTGATACTTTGGGATGTTCAGTTCTTTCCCATTCTAAATTTTAACTTGATTTGTTCATTGGAAATGAATGGTTGTACCTTTATTCTTGTCTATAGTTGGTTTAGTGCATCCCAATTTTATTGTACAATAGTTGGACTTCCAAACAGTTTGGGTTCGTTCCTCATGTCTACTTCTTGATGCACTTAAGTTCATTTGGTTGTGTTCAGATTTACTTACATTTTGACTAATCTCATGGGACAATTGTCTCTTTTTAAAGATTTGGTTGTCAATAAACTCTCAAGATTGTAGTATTCTAAGTAGGTGGCCAACCTAGGATGGTTACACTTAGTTTCTTCTCATCAATTTCCTTCTCATGAATCATCAAATTTCATAATCTGATTTATTTGTTTCCCTGTGAGCTGAAAATTAGATGCCAAAACTTCTGATACTTCCCTGACACTGTCTCGCAAACTTAGAAGTGTCACAGATTTATATTTGACTTTGTTATCAAGTTCTTTTTATTATATTCACAGTGATATCATATATTATTTTTATGCTTGATTTACAGGGAGTCGGACAAAGTGGATGAAGATGGGGGAACGGCTGGAAGTGGTAAGAAACAATTAAGACTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGAATGTTTGATTACATTCTATGTTTCAACCATCCTCCACTTGATTAATTAAGTAGCTGATAAGCAATAGTTTTGGTGTGTACTAATTGGGTGTTCTGCTTAGAAAACATATTTTAGATGGTAACTGCCACGTACTTGACTTTCTTTAAAGGTACTTCAATGTCTTAACAGTTAGTTTGTAATAGTCTAAAAGTACTTTAAAGTGCTGTTAAATATTTTTGGATTTCTTAAAAACCATTTTACTTATTTATTTAAATAAGCT

mRNA sequence

TGCTTATCTAAGTTTGTTAAAAAATTTCAACAAAAATTCACAATATTATTATAGACTTTGTGATGTAAGTGATTTTTCATAGAATATTAGTTGATATTTAAATATCTATCAACATATCCGTAAATTAGGGTTACTAATATCTACCCAGATAACTATATGTTCGTCCTTGCTTGTGCTCTATTCTCATGTTGCTAATGCTTGACGTCGTTGCCATAGTTGTCGTTTAAGCGGGAAGCTACTAAAAGAATAAAAGAAAATTGCAAAATGAATAATGTCCAACTTTTTAAAAAACAATAGTAATTGACATGTTATAACCACGTGAAGCTACGAATTCGCCCTTCCTCCCGAGAATGAACACGAAAGAGTGAGAGAAAGGGAGAGATGAAAGCAATTTTTGAGGGAGAAGAGAACAAGAGAACGAGAGTAAGAGATAAAAAGAATACTAAAGAAAGGGAAAGAGAAAGCGAGAGTGAGAAACTCGAATTTGACGTAAACCTCCTTTAGTCATTTCCCCCCAAATTTGGTTAATCCATCCGGCGGACCCAAAGAGTCAGAACCAAAGGAGCTTCCATGGCGGGATCGACCTAAACGAAGTGAACTCACAATCGAAGAAACACTCAAGTAAAGAGAGGAAGAGAGATTCTCTTCTAAACCGACGTAGCGACTAGCGAGTAGAAATCAGCAATGTCTTCGCAAGATCCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCCGTTTTAGGGCCAATGGTGTATGGATGCTTGTACTGCGCTACTTCCTATTTGATAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAGAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGATGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCCATGGGTCTGGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGATCTACACCAAAGTCAACGAGAATGTAAATGAACCAGTTTCATATCTTGATTACAGTAGTACGGTCTATGTGGATACTGTTGGAGATTCTGAAAAGTACAGAATTAAGTTGTCTGAGAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACGGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACGTTAGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACGTCGTTGAAGTATTATGGGAGTCGGACAAAGTGGATGAAGATGGGGGAACGGCTGGAAGTGGTAAGAAACAATTAAGACTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGAATGTTTGATTACATTCTATGTTTCAACCATCCTCCACTTGATTAATTAAGTAGCTGATAAGCAATAGTTTTGGTGTGTACTAATTGGGTGTTCTGCTTAGAAAACATATTTTAGATGGTAACTGCCACGTACTTGACTTTCTTTAAAGGTACTTCAATGTCTTAACAGTTAGTTTGTAATAGTCTAAAAGTACTTTAAAGTGCTGTTAAATATTTTTGGATTTCTTAAAAACCATTTTACTTATTTATTTAAATAAGCT

Coding sequence (CDS)

ATGTCTTCGCAAGATCCACTCCCAAAATGGGCTTCCAAGCCTTGTGTAATGGGCATCGATGAAGCTGGTCGAGGCCCCGTTTTAGGGCCAATGGTGTATGGATGCTTGTACTGCGCTACTTCCTATTTGATAGAACTTTCGTCTTTGAATTTTGCAGACTCAAAAACTTTGAGAGAAGAGAAGAGGGAGGAATTGTTTGAAGATTTGAAGGCTAACGAGTCAATTGGATGGGCTGTTGATGTCATAGATCCTCGAGAACTTTCATCCAAAATGCTAAATAAAGTAAAGATAAACCTAAATGAAATATCACATGACTCTGCCATGGGTCTGGTCACCAAGGTTCTAGGCATGGGAGTTCTTTTAACTGAGATCTACACCAAAGTCAACGAGAATGTAAATGAACCAGTTTCATATCTTGATTACAGTAGTACGGTCTATGTGGATACTGTTGGAGATTCTGAAAAGTACAGAATTAAGTTGTCTGAGAAATTTCCCAATGTAAAATTTGTAGTTGCAAAGAAAGCTGATAGTTTATATCCTGTTGTCAGTGGGGCAAGCATAGTCGCAAAGGTCACAAGAGATCGTGCATTGCGGGAATGGGCATTGGAGGAAACGGCTGAAAACATGCATAGAAACTTTGGTTCTGGATACCCTGGAGATCCAACAACTAAATGTTGGTTAGAAGATCACAAGCACTCGGTATTTGGGTTCCCCACGTTAGTCCGCTTCAGTTGGGGTACCTGCACTTCATATTTCAAAGACGTCGTTGAAGTATTATGGGAGTCGGACAAAGTGGATGAAGATGGGGGAACGGCTGGAAGTGGTAAGAAACAATTAAGACTAAGCAATGTTGGTATCACCACATCCAAGAGAAAGAGTGAAGAAATTGAATCAAATGCCAAAGGACGGTGCAAGTTTTTCCAGGCTAGAAAACTTGAACAACTCACTCATTTTTGA

Protein sequence

MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREEKREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYPVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGRCKFFQARKLEQLTHF

Homology

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BLAST of CcUC07G143530 vs. NCBI nr
Match: XP_023527419.1 (ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo])

HSP 1 Score: 566.2 bits (1458), Expect = 1.7e-157
Identity = 285/318 (89.62%), Postives = 288/318 (90.57%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL ELSSLNFADSKTL+EE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                     VYVDTVGD EKYRIKLSEKFPNVKFVVAKKADSLYP
Sbjct: 121 LTE---------------------VYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           VVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL
Sbjct: 181 VVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNA
Sbjct: 241 VRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNA 297

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKFFQARKLEQLTHF
Sbjct: 301 KGRCKFFQARKLEQLTHF 297

[Close]

BLAST of CcUC07G143530 vs. NCBI nr
Match: XP_038902264.1 (ribonuclease H2 subunit A [Benincasa hispida])

HSP 1 Score: 563.9 bits (1452), Expect = 8.7e-157
Identity = 284/318 (89.31%), Postives = 291/318 (91.51%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           MSSQ P+PKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYL ELSSLNFADSKTL+EE
Sbjct: 1   MSSQYPVPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLG+GVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGIGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                     VYVDTVGD EKYRIKLSEKFP+VKFVVAKKADSLYP
Sbjct: 121 LTE---------------------VYVDTVGDPEKYRIKLSEKFPSVKFVVAKKADSLYP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL
Sbjct: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLS+VGITTSKRKSEEIESNA
Sbjct: 241 VRFSWGTCTSYFKDIVEVSWESDKVDEDGATTGSGKKQLRLSSVGITTSKRKSEEIESNA 297

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKFFQARKLEQLTHF
Sbjct: 301 KGRCKFFQARKLEQLTHF 297

[Close]

BLAST of CcUC07G143530 vs. NCBI nr
Match: XP_022979887.1 (ribonuclease H2 subunit A [Cucurbita maxima])

HSP 1 Score: 563.5 bits (1451), Expect = 1.1e-156
Identity = 283/318 (88.99%), Postives = 288/318 (90.57%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL ELSSLNFADSKTL+EE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                     VYVDTVGD EKYRIKLSEKFPNVKFVV+KKADSLYP
Sbjct: 121 LTE---------------------VYVDTVGDPEKYRIKLSEKFPNVKFVVSKKADSLYP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           VVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFP+L
Sbjct: 181 VVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPSL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNA
Sbjct: 241 VRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNA 297

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKFFQARKLEQLTHF
Sbjct: 301 KGRCKFFQARKLEQLTHF 297

[Close]

BLAST of CcUC07G143530 vs. NCBI nr
Match: XP_022955431.1 (ribonuclease H2 subunit A [Cucurbita moschata])

HSP 1 Score: 562.8 bits (1449), Expect = 1.9e-156
Identity = 283/318 (88.99%), Postives = 286/318 (89.94%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL ELSSLNFADSK L+EE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                     VYVDTVGD EKYRIKLSEKFPNVKFVVAKKADSLYP
Sbjct: 121 LTE---------------------VYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           VVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL
Sbjct: 181 VVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNA
Sbjct: 241 VRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNA 297

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKFFQARKLEQLTHF
Sbjct: 301 KGRCKFFQARKLEQLTHF 297

[Close]

BLAST of CcUC07G143530 vs. NCBI nr
Match: KAG6582048.1 (Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 561.6 bits (1446), Expect = 4.3e-156
Identity = 283/318 (88.99%), Postives = 286/318 (89.94%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL ELSSLNFADSKTL+EE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                     VYVDTVGD EKYRIKLSEKFPNVKFVVAKKADSLYP
Sbjct: 121 LTE---------------------VYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           VVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL
Sbjct: 181 VVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNA
Sbjct: 241 VRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNA 297

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKFFQARKLEQLT F
Sbjct: 301 KGRCKFFQARKLEQLTQF 297

[Close]

BLAST of CcUC07G143530 vs. ExPASy Swiss-Prot
Match: Q9SEZ6 (Ribonuclease H2 subunit A OS=Arabidopsis thaliana OX=3702 GN=At2g25100 PE=2 SV=2)

HSP 1 Score: 428.7 bits (1101), Expect = 5.7e-119
Identity = 210/318 (66.04%), Postives = 255/318 (80.19%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTL+EE
Sbjct: 1   MESECLTPEWASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLNEISH+SAMGL+ +VL MGVL
Sbjct: 61  KREELYESLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                      Y+DTVGD +KYRIKLSE+FP++KFVV+KKADSL+P
Sbjct: 121 LTE---------------------AYLDTVGDPDKYRIKLSERFPSIKFVVSKKADSLFP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           +VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP TK WL  HKHSVFGFP+L
Sbjct: 181 IVSGASIVAKVTRDRALKEWLVEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCT++ K  VEV WE+D+ +E+ G   S K+Q +LS+ G  T +++SEEIES+ 
Sbjct: 241 VRFSWGTCTTHLKGEVEVAWEADE-NEESGNGSSSKRQAKLSSFGFKTCEKRSEEIESSG 296

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKF QARK++QLT F
Sbjct: 301 KGRCKFLQARKIQQLTQF 296

[Close]

BLAST of CcUC07G143530 vs. ExPASy Swiss-Prot
Match: O75792 (Ribonuclease H2 subunit A OS=Homo sapiens OX=9606 GN=RNASEH2A PE=1 SV=2)

HSP 1 Score: 240.0 bits (611), Expect = 3.8e-62
Identity = 132/313 (42.17%), Postives = 182/313 (58.15%), Query Frame = 0


Query: 6   PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREEKREE 65
           P+P    K PCV+G+DEAGRGPVLGPMVY   YC    L +L +L  ADSKTL E +RE 
Sbjct: 19  PVPAVCRKEPCVLGVDEAGRGPVLGPMVYAICYCPLPRLADLEALKVADSKTLLESERER 78

Query: 66  LFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTEI 125
           LF  ++  + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GL+   L  GV +T+ 
Sbjct: 79  LFAKMEDTDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTATGLIQYALDQGVNVTQ- 138

Query: 126 YTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYPVVSG 185
                               V+VDTVG  E Y+ +L + FP ++  V  KAD+LYPVVS 
Sbjct: 139 --------------------VFVDTVGMPETYQARLQQSFPGIEVTVKAKADALYPVVSA 198

Query: 186 ASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRFS 245
           ASI AKV RD+A+++W   E  +++  ++GSGYP DP TK WL++H   VFGFP  VRFS
Sbjct: 199 ASICAKVARDQAVKKWQFVEKLQDLDTDYGSGYPNDPKTKAWLKEHVEPVFGFPQFVRFS 258

Query: 246 WGTC-TSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNAKGR 305
           W T  T   K+  +V+WE         +A   ++ LR       TS   +E  ++  +  
Sbjct: 259 WRTAQTILEKEAEDVIWED--------SASENQEGLRK-----ITSYFLNEGSQARPRSS 297

Query: 306 CKFFQARKLEQLT 317
            ++F  R LE  T
Sbjct: 319 HRYFLERGLESAT 297

[Close]

BLAST of CcUC07G143530 vs. ExPASy Swiss-Prot
Match: Q9CWY8 (Ribonuclease H2 subunit A OS=Mus musculus OX=10090 GN=Rnaseh2a PE=1 SV=2)

HSP 1 Score: 240.0 bits (611), Expect = 3.8e-62
Identity = 122/266 (45.86%), Postives = 164/266 (61.65%), Query Frame = 0


Query: 6   PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREEKREE 65
           P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE 
Sbjct: 19  PVPAVCLKEPCVLGVDEAGRGPVLGPMVYAICYCPLSRLADLEALKVADSKTLTENERER 78

Query: 66  LFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTE 125
           LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GL+   L   V +T+
Sbjct: 79  LFAKMEEDGDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTAAGLIQYALDQNVNVTQ 138

Query: 126 IYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYPVVS 185
                                V+VDTVG  E Y+ +L + FP ++  V  KADSL+PVVS
Sbjct: 139 ---------------------VFVDTVGMPETYQARLQQHFPGIEVTVKAKADSLFPVVS 198

Query: 186 GASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRF 245
            ASI AKV RD+A++ W   E  +++  ++GSGYP DP TK WL  H   VFGFP  VRF
Sbjct: 199 AASIFAKVARDKAVKNWQFVENLQDLDSDYGSGYPNDPKTKAWLRKHVDPVFGFPQFVRF 258

Query: 246 SWGTCTSYF-KDVVEVLWESDKVDED 269
           SW T  +   K+  +V+WE  + +ED
Sbjct: 259 SWSTAQAILEKEAEDVIWEDSEAEED 263

[Close]

BLAST of CcUC07G143530 vs. ExPASy Swiss-Prot
Match: Q5U209 (Ribonuclease H2 subunit A OS=Rattus norvegicus OX=10116 GN=Rnaseh2a PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 8.4e-62
Identity = 120/266 (45.11%), Postives = 163/266 (61.28%), Query Frame = 0


Query: 6   PLPKWASK-PCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREEKREE 65
           P+P    K PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E +RE 
Sbjct: 19  PVPAVCLKEPCVLGVDEAGRGPVLGPMVYAICYCPLSRLADLEALKVADSKTLTENERER 78

Query: 66  LFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVLLTE 125
           LF  ++ + + +GWA+D++ P  +S+ ML +VK NLN +SHD+A GL+   +   V +T+
Sbjct: 79  LFAKMEEDGDFVGWALDILSPNLISTSMLGRVKYNLNSMSHDTAAGLIQHAMDQNVKVTQ 138

Query: 126 IYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYPVVS 185
                                V+VDTVG  E Y+ +L ++FP ++  V  KADSL+PVVS
Sbjct: 139 ---------------------VFVDTVGMPETYQARLQQRFPGIEVTVKAKADSLFPVVS 198

Query: 186 GASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTLVRF 245
            ASI+AKV RD+A++ W   E+ + +  ++GSGYP DP TK WL  H   VFGFP  VRF
Sbjct: 199 AASIIAKVARDQAVKNWQFVESLQGLDSDYGSGYPNDPKTKAWLRKHVDPVFGFPQFVRF 258

Query: 246 SWGTCTSYF-KDVVEVLWESDKVDED 269
           SW T  +   K+   V WE    +ED
Sbjct: 259 SWSTAQAILEKEAESVTWEDSAAEED 263

[Close]

BLAST of CcUC07G143530 vs. ExPASy Swiss-Prot
Match: Q2TBT5 (Ribonuclease H2 subunit A OS=Bos taurus OX=9913 GN=RNASEH2A PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.3e-59
Identity = 135/318 (42.45%), Postives = 179/318 (56.29%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           +SS  P P    +PCV+G+DEAGRGPVLGPMVY   YC  S L +L +L  ADSKTL E 
Sbjct: 16  LSSPVP-PVCLKEPCVLGVDEAGRGPVLGPMVYAICYCPLSRLEDLEALKVADSKTLSES 75

Query: 61  KREELFEDLKAN-ESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGV 120
           +R+ LF  ++ + + +GWA+DV+ P  +S+ ML +VK NLN +SHD+A GLV   L  GV
Sbjct: 76  ERDRLFAKMEEDGDFVGWALDVLSPNLISTSMLGRVKYNLNALSHDTATGLVQFALDQGV 135

Query: 121 LLTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLY 180
            + +                     V+VDTVG  E Y+ +L ++FP ++  V  KAD+LY
Sbjct: 136 NVAQ---------------------VFVDTVGLPETYQERLQQRFPGIEVTVKAKADALY 195

Query: 181 PVVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPT 240
           PVVS ASI AKV RD+A++ W   E  +++  ++GSGYP DP TK WL  H   VFGFP 
Sbjct: 196 PVVSAASICAKVARDQAVKNWKFVEKLQDLDTDYGSGYPNDPKTKAWLRKHVDPVFGFPQ 255

Query: 241 LVRFSWGTCTSYFKDVVE-VLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIES 300
            VRFSW T  S  +   E V WE     E G   G GK                SE  ++
Sbjct: 256 FVRFSWRTAQSILESEAEDVKWED---SETGDPKGPGK-----------IKSYFSESPQT 297

Query: 301 NAKGRCKFFQARKLEQLT 317
             +   ++FQ R LE  T
Sbjct: 316 CLRLPHRYFQERGLESAT 297

[Close]

BLAST of CcUC07G143530 vs. ExPASy TrEMBL
Match: A0A6J1IPY0 (Ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111479443 PE=3 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 5.5e-157
Identity = 283/318 (88.99%), Postives = 288/318 (90.57%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL ELSSLNFADSKTL+EE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                     VYVDTVGD EKYRIKLSEKFPNVKFVV+KKADSLYP
Sbjct: 121 LTE---------------------VYVDTVGDPEKYRIKLSEKFPNVKFVVSKKADSLYP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           VVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFP+L
Sbjct: 181 VVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPSL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNA
Sbjct: 241 VRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNA 297

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKFFQARKLEQLTHF
Sbjct: 301 KGRCKFFQARKLEQLTHF 297

[Close]

BLAST of CcUC07G143530 vs. ExPASy TrEMBL
Match: A0A6J1GTR5 (Ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111457459 PE=3 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 9.3e-157
Identity = 283/318 (88.99%), Postives = 286/318 (89.94%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYC  SYL ELSSLNFADSK L+EE
Sbjct: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCTRSYLKELSSLNFADSKALKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFE LK NESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL
Sbjct: 61  KREELFEGLKTNESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                     VYVDTVGD EKYRIKLSEKFPNVKFVVAKKADSLYP
Sbjct: 121 LTE---------------------VYVDTVGDPEKYRIKLSEKFPNVKFVVAKKADSLYP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           VVSGASIVAKVTRDR LR+WALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL
Sbjct: 181 VVSGASIVAKVTRDRVLRDWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCTSYFKD+VEV WESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNA
Sbjct: 241 VRFSWGTCTSYFKDIVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNA 297

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKFFQARKLEQLTHF
Sbjct: 301 KGRCKFFQARKLEQLTHF 297

[Close]

BLAST of CcUC07G143530 vs. ExPASy TrEMBL
Match: A0A5A7TT92 (Ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001310 PE=3 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.3e-155
Identity = 283/318 (88.99%), Postives = 287/318 (90.25%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYL ELSSLNFADSKTL+EE
Sbjct: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                     VYVDTVGD EKYRIKLSEKFPN+KFVVAKKADSLYP
Sbjct: 121 LTE---------------------VYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL
Sbjct: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCTSYFKDVVEV WESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNA
Sbjct: 241 VRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNA 297

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKFFQARKLEQL+ F
Sbjct: 301 KGRCKFFQARKLEQLSRF 297

[Close]

BLAST of CcUC07G143530 vs. ExPASy TrEMBL
Match: A0A1S3BXP1 (Ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494542 PE=3 SV=1)

HSP 1 Score: 558.9 bits (1439), Expect = 1.3e-155
Identity = 283/318 (88.99%), Postives = 287/318 (90.25%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           MS QD LPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYL ELSSLNFADSKTL+EE
Sbjct: 1   MSLQDSLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKELSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISH SAMGLVTKVL MGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHGSAMGLVTKVLSMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                     VYVDTVGD EKYRIKLSEKFPN+KFVVAKKADSLYP
Sbjct: 121 LTE---------------------VYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL
Sbjct: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCTSYFKDVVEV WESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIESNA
Sbjct: 241 VRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESNA 297

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKFFQARKLEQL+ F
Sbjct: 301 KGRCKFFQARKLEQLSRF 297

[Close]

BLAST of CcUC07G143530 vs. ExPASy TrEMBL
Match: A0A0A0KTZ4 (Ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_4G015800 PE=3 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.0e-155
Identity = 281/318 (88.36%), Postives = 287/318 (90.25%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           MSSQD LPKW SKPCVMGIDEAGRGPVLGPMVYGCLYCA+SYL +LSSLNFADSKTL+EE
Sbjct: 1   MSSQDSLPKWTSKPCVMGIDEAGRGPVLGPMVYGCLYCASSYLKQLSSLNFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVL MGVL
Sbjct: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLSMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                     VYVDTVGD EKYRIKLSEKFPN+KFVVAKKADSLYP
Sbjct: 121 LTE---------------------VYVDTVGDPEKYRIKLSEKFPNIKFVVAKKADSLYP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL
Sbjct: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCTSYFKDVVEV WESDKVDEDG T GSGKKQLRLSNVGITTSKRKSEEIES+ 
Sbjct: 241 VRFSWGTCTSYFKDVVEVSWESDKVDEDGATGGSGKKQLRLSNVGITTSKRKSEEIESSG 297

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKFFQARKLEQL+ F
Sbjct: 301 KGRCKFFQARKLEQLSRF 297

[Close]

BLAST of CcUC07G143530 vs. TAIR 10
Match: AT2G25100.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 428.7 bits (1101), Expect = 4.1e-120
Identity = 210/318 (66.04%), Postives = 255/318 (80.19%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTL+EE
Sbjct: 1   MESECLTPEWASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREEL+E LK ++S+GWAVDVIDPRELS+KML K K NLNEISH+SAMGL+ +VL MGVL
Sbjct: 61  KREELYESLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                      Y+DTVGD +KYRIKLSE+FP++KFVV+KKADSL+P
Sbjct: 121 LTE---------------------AYLDTVGDPDKYRIKLSERFPSIKFVVSKKADSLFP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           +VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP TK WL  HKHSVFGFP+L
Sbjct: 181 IVSGASIVAKVTRDRALKEWLVEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCT++ K  VEV WE+D+ +E+ G   S K+Q +LS+ G  T +++SEEIES+ 
Sbjct: 241 VRFSWGTCTTHLKGEVEVAWEADE-NEESGNGSSSKRQAKLSSFGFKTCEKRSEEIESSG 296

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKF QARK++QLT F
Sbjct: 301 KGRCKFLQARKIQQLTQF 296

[Close]

BLAST of CcUC07G143530 vs. TAIR 10
Match: AT2G25100.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 392.9 bits (1008), Expect = 2.5e-109
Identity = 197/318 (61.95%), Postives = 239/318 (75.16%), Query Frame = 0


Query: 1   MSSQDPLPKWASKPCVMGIDEAGRGPVLGPMVYGCLYCATSYLIELSSLNFADSKTLREE 60
           M S+   P+WAS+PC+MGIDEAGRGPVLGPMVYGC+YC  SY   L+SL+FADSKTL+EE
Sbjct: 1   MESECLTPEWASQPCLMGIDEAGRGPVLGPMVYGCMYCPISYQSSLASLHFADSKTLKEE 60

Query: 61  KREELFEDLKANESIGWAVDVIDPRELSSKMLNKVKINLNEISHDSAMGLVTKVLGMGVL 120
           KREEL+E LK ++S+GWAVDVIDPRELS+KML                    KVL MGVL
Sbjct: 61  KREELYESLKLDKSLGWAVDVIDPRELSAKML-------------------AKVLDMGVL 120

Query: 121 LTEIYTKVNENVNEPVSYLDYSSTVYVDTVGDSEKYRIKLSEKFPNVKFVVAKKADSLYP 180
           LTE                      Y+DTVGD +KYRIKLSE+FP++KFVV+KKADSL+P
Sbjct: 121 LTE---------------------AYLDTVGDPDKYRIKLSERFPSIKFVVSKKADSLFP 180

Query: 181 VVSGASIVAKVTRDRALREWALEETAENMHRNFGSGYPGDPTTKCWLEDHKHSVFGFPTL 240
           +VSGASIVAKVTRDRAL+EW +EET E+++RNFGSGYPGDP TK WL  HKHSVFGFP+L
Sbjct: 181 IVSGASIVAKVTRDRALKEWLVEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSL 240

Query: 241 VRFSWGTCTSYFKDVVEVLWESDKVDEDGGTAGSGKKQLRLSNVGITTSKRKSEEIESNA 300
           VRFSWGTCT++ K  VEV WE+D+ +E+ G   S K+Q +LS+ G  T +++SEEIES+ 
Sbjct: 241 VRFSWGTCTTHLKGEVEVAWEADE-NEESGNGSSSKRQAKLSSFGFKTCEKRSEEIESSG 277

Query: 301 KGRCKFFQARKLEQLTHF 319
           KGRCKF QARK++QLT F
Sbjct: 301 KGRCKFLQARKIQQLTQF 277

The following BLAST results are available for this feature:

BLAST of CcUC07G143530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023527419.1	1.7e-157	89.62	ribonuclease H2 subunit A [Cucurbita pepo subsp. pepo]	[more]
XP_038902264.1	8.7e-157	89.31	ribonuclease H2 subunit A [Benincasa hispida]	[more]
XP_022979887.1	1.1e-156	88.99	ribonuclease H2 subunit A [Cucurbita maxima]	[more]
XP_022955431.1	1.9e-156	88.99	ribonuclease H2 subunit A [Cucurbita moschata]	[more]
KAG6582048.1	4.3e-156	88.99	Ribonuclease H2 subunit A, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CcUC07G143530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEZ6	5.7e-119	66.04	Ribonuclease H2 subunit A OS=Arabidopsis thaliana OX=3702 GN=At2g25100 PE=2 SV=2	[more]
O75792	3.8e-62	42.17	Ribonuclease H2 subunit A OS=Homo sapiens OX=9606 GN=RNASEH2A PE=1 SV=2	[more]
Q9CWY8	3.8e-62	45.86	Ribonuclease H2 subunit A OS=Mus musculus OX=10090 GN=Rnaseh2a PE=1 SV=2	[more]
Q5U209	8.4e-62	45.11	Ribonuclease H2 subunit A OS=Rattus norvegicus OX=10116 GN=Rnaseh2a PE=2 SV=1	[more]
Q2TBT5	1.3e-59	42.45	Ribonuclease H2 subunit A OS=Bos taurus OX=9913 GN=RNASEH2A PE=1 SV=1	[more]

BLAST of CcUC07G143530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPY0	5.5e-157	88.99	Ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111479443 PE=3 SV=1	[more]
A0A6J1GTR5	9.3e-157	88.99	Ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111457459 PE=3 SV=1	[more]
A0A5A7TT92	1.3e-155	88.99	Ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold130G001310 ...	[more]
A0A1S3BXP1	1.3e-155	88.99	Ribonuclease OS=Cucumis melo OX=3656 GN=LOC103494542 PE=3 SV=1	[more]
A0A0A0KTZ4	3.0e-155	88.36	Ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_4G015800 PE=3 SV=1	[more]

BLAST of CcUC07G143530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25100.1	4.1e-120	66.04	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G25100.2	2.5e-109	61.95	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024567	Ribonuclease HII/HIII domain	PFAM	PF01351	RNase_HII	coord: 17..131 e-value: 5.1E-24 score: 85.2 coord: 143..248 e-value: 1.9E-20 score: 73.6
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..207 e-value: 9.7E-63 score: 213.4
IPR023160	Ribonuclease HII, helix-loop-helix cap domain superfamily	GENE3D	1.10.10.460	Ribonuclease hii. Domain 2	coord: 208..255 e-value: 7.8E-20 score: 72.3
IPR004649	Ribonuclease H2, subunit A	TIGRFAM	TIGR00729	TIGR00729	coord: 16..249 e-value: 4.3E-51 score: 171.9
IPR001352	Ribonuclease HII/HIII	PANTHER	PTHR10954	RIBONUCLEASE H2 SUBUNIT A	coord: 7..128
IPR001352	Ribonuclease HII/HIII	PANTHER	PTHR10954	RIBONUCLEASE H2 SUBUNIT A	coord: 144..317
None	No IPR available	PANTHER	PTHR10954:SF19	RIBONUCLEASE	coord: 7..128
None	No IPR available	PANTHER	PTHR10954:SF19	RIBONUCLEASE	coord: 144..317
None	No IPR available	CDD	cd07181	RNase_HII_eukaryota_like	coord: 17..254 e-value: 7.21167E-133 score: 374.933
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 15..253

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G143530.1	CcUC07G143530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043137	DNA replication, removal of RNA primer
biological_process	GO:0006298	mismatch repair
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0016070	RNA metabolic process
cellular_component	GO:0032299	ribonuclease H2 complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0003676	nucleic acid binding