CcUC07G143320 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G143320
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Protein of unknown function (DUF 3339)
Location	CicolChr07: 29481759 .. 29481965 (-)
RNA-Seq Expression	CcUC07G143320
Synteny	CcUC07G143320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTGGGGCCCAGTTTTCGTGGCTGTGGTTCTGTTCCTTCTTCTATCACCAGGTCTTCTCTTTCAGGTCCCTGCCCACCACCAATTTCTTCAGTTCGGTAACTTCCAAACCAGCGGCGCCTCCATTTTCATCCATTCCCTCATCTTCTTTGCCCTAATTTCCCTCTTCACCTTCGTCATTCAACTTCACATCTACATCTGA

mRNA sequence

ATGGCGGATTGGGGCCCAGTTTTCGTGGCTGTGGTTCTGTTCCTTCTTCTATCACCAGGTCTTCTCTTTCAGGTCCCTGCCCACCACCAATTTCTTCAGTTCGGTAACTTCCAAACCAGCGGCGCCTCCATTTTCATCCATTCCCTCATCTTCTTTGCCCTAATTTCCCTCTTCACCTTCGTCATTCAACTTCACATCTACATCTGA

Coding sequence (CDS)

ATGGCGGATTGGGGCCCAGTTTTCGTGGCTGTGGTTCTGTTCCTTCTTCTATCACCAGGTCTTCTCTTTCAGGTCCCTGCCCACCACCAATTTCTTCAGTTCGGTAACTTCCAAACCAGCGGCGCCTCCATTTTCATCCATTCCCTCATCTTCTTTGCCCTAATTTCCCTCTTCACCTTCGTCATTCAACTTCACATCTACATCTGA

Protein sequence

MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTFVIQLHIYI

Homology

[Close]

BLAST of CcUC07G143320 vs. NCBI nr
Match: XP_038900916.1 (uncharacterized protein LOC120087962 [Benincasa hispida])

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQVP HH+F+QFGNFQTSGASIFIHSLIFFALISLFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHRFVQFGNFQTSGASIFIHSLIFFALISLFTF 60

Query: 61 VIQLHIYI 69
          VIQLHIYI
Sbjct: 61 VIQLHIYI 68

[Close]

BLAST of CcUC07G143320 vs. NCBI nr
Match: XP_008454011.1 (PREDICTED: uncharacterized protein LOC103494560 [Cucumis melo])

HSP 1 Score: 124.4 bits (311), Expect = 3.8e-25
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQ+P HH F+QFGNFQTSG+SIFIHSLIFFALISLFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60

Query: 61 VIQLHIYI 69
          VIQLHIYI
Sbjct: 61 VIQLHIYI 68

[Close]

BLAST of CcUC07G143320 vs. NCBI nr
Match: XP_004152115.1 (uncharacterized protein LOC101215007 [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQ+P H+ F+QFGNFQTSGASIFIHSLIFFALISLFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHNSFVQFGNFQTSGASIFIHSLIFFALISLFTF 60

Query: 61 VIQLHIYI 69
          VIQLHIYI
Sbjct: 61 VIQLHIYI 68

[Close]

BLAST of CcUC07G143320 vs. NCBI nr
Match: XP_022932694.1 (uncharacterized protein LOC111439163 [Cucurbita moschata] >XP_022972135.1 uncharacterized protein LOC111470767 [Cucurbita maxima] >XP_023539087.1 uncharacterized protein LOC111799839 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 122.5 bits (306), Expect = 1.4e-24
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQVP HH F+QFGNFQTSGASIFIHSLIFFALI LFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTF 60

Query: 61 VIQLHIYI 69
          V+QLHIY+
Sbjct: 61 VLQLHIYL 68

[Close]

BLAST of CcUC07G143320 vs. NCBI nr
Match: XP_022145182.1 (uncharacterized protein LOC111014687 [Momordica charantia])

HSP 1 Score: 121.3 bits (303), Expect = 3.2e-24
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQVP HHQF++FGNF TSGASIFIHSLIFFAL+ LFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTF 60

Query: 61 VIQLHIYI 69
          V+QLHIYI
Sbjct: 61 VVQLHIYI 68

[Close]

BLAST of CcUC07G143320 vs. ExPASy TrEMBL
Match: A0A1S3BX44 (uncharacterized protein LOC103494560 OS=Cucumis melo OX=3656 GN=LOC103494560 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.8e-25
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQ+P HH F+QFGNFQTSG+SIFIHSLIFFALISLFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQIPGHHSFIQFGNFQTSGSSIFIHSLIFFALISLFTF 60

Query: 61 VIQLHIYI 69
          VIQLHIYI
Sbjct: 61 VIQLHIYI 68

[Close]

BLAST of CcUC07G143320 vs. ExPASy TrEMBL
Match: A0A6J1I7P7 (uncharacterized protein LOC111470767 OS=Cucurbita maxima OX=3661 GN=LOC111470767 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.9e-25
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQVP HH F+QFGNFQTSGASIFIHSLIFFALI LFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTF 60

Query: 61 VIQLHIYI 69
          V+QLHIY+
Sbjct: 61 VLQLHIYL 68

[Close]

BLAST of CcUC07G143320 vs. ExPASy TrEMBL
Match: A0A6J1EXQ9 (uncharacterized protein LOC111439163 OS=Cucurbita moschata OX=3662 GN=LOC111439163 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.9e-25
Identity = 62/68 (91.18%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQVP HH F+QFGNFQTSGASIFIHSLIFFALI LFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHHFIQFGNFQTSGASIFIHSLIFFALICLFTF 60

Query: 61 VIQLHIYI 69
          V+QLHIY+
Sbjct: 61 VLQLHIYL 68

[Close]

BLAST of CcUC07G143320 vs. ExPASy TrEMBL
Match: A0A6J1CVS1 (uncharacterized protein LOC111014687 OS=Momordica charantia OX=3673 GN=LOC111014687 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-24
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPVFVAVVLFLLLSPGLLFQVP HHQF++FGNF TSGASIFIHSLIFFAL+ LFTF
Sbjct: 1  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTF 60

Query: 61 VIQLHIYI 69
          V+QLHIYI
Sbjct: 61 VVQLHIYI 68

[Close]

BLAST of CcUC07G143320 vs. ExPASy TrEMBL
Match: A0A6P6V1L2 (uncharacterized protein LOC113716736 OS=Coffea arabica OX=13443 GN=LOC113716736 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.7e-18
Identity = 46/68 (67.65%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          M+DWGP+FVAVVLF+LLSPGLLFQ+P HH+ ++FGN QTSGA+I +HSL++FALIS+F  
Sbjct: 1  MSDWGPIFVAVVLFVLLSPGLLFQIPGHHRCVEFGNLQTSGAAIMVHSLLYFALISVFLL 60

Query: 61 VIQLHIYI 69
           I+LH+Y+
Sbjct: 61 AIKLHLYL 68

[Close]

BLAST of CcUC07G143320 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 94.4 bits (233), Expect = 3.9e-20
Identity = 45/67 (67.16%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPV VAV+LF+LL+PGLLFQ+PA  + ++FGN QTSGASI +H++IFF LI++FT 
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 VIQLHIY 68
           I+LHIY
Sbjct: 61 AIRLHIY 67

[Close]

BLAST of CcUC07G143320 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 92.0 bits (227), Expect = 1.9e-19
Identity = 43/67 (64.18%), Postives = 57/67 (85.07%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          MADWGPV +AV+LF++LSPGLLFQ+PA  + ++FGN QTSGASI +H++IFF LI++FT 
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 VIQLHIY 68
           I +HIY
Sbjct: 61 AINVHIY 67

[Close]

BLAST of CcUC07G143320 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 85.1 bits (209), Expect = 2.4e-17
Identity = 36/68 (52.94%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 1  MADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTF 60
          M+DWGPV V V+LF++L+PGLLFQ+P   ++++FGNFQTS  S+ +HSL++F+L+ +F  
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 VIQLHIYI 69
           +++HIYI
Sbjct: 61 ALKIHIYI 68

[Close]

BLAST of CcUC07G143320 vs. TAIR 10
Match: AT3G01940.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 82.0 bits (201), Expect = 2.0e-16
Identity = 40/67 (59.70%), Postives = 54/67 (80.60%), Query Frame = 0


Query: 2  ADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTFV 61
          ADWGPV VAVVLF++LSPGLLFQ+PA  + L+ GN  TSG SI +H+++FFA+I++    
Sbjct: 4  ADWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIA 63

Query: 62 IQLHIYI 69
          IQ+HI+I
Sbjct: 64 IQIHIHI 70

[Close]

BLAST of CcUC07G143320 vs. TAIR 10
Match: AT5G40980.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 80.9 bits (198), Expect = 4.4e-16
Identity = 37/66 (56.06%), Postives = 52/66 (78.79%), Query Frame = 0


Query: 2  ADWGPVFVAVVLFLLLSPGLLFQVPAHHQFLQFGNFQTSGASIFIHSLIFFALISLFTFV 61
          ADWGPV VAV LF+LLSPGLLFQ+PA  + ++FGN  TSG SI +H++I+F ++++    
Sbjct: 3  ADWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHAIIYFCILTILIIA 62

Query: 62 IQLHIY 68
          IQ+HI+
Sbjct: 63 IQIHIH 68

The following BLAST results are available for this feature:

BLAST of CcUC07G143320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900916.1	1.3e-25	95.59	uncharacterized protein LOC120087962 [Benincasa hispida]	[more]
XP_008454011.1	3.8e-25	92.65	PREDICTED: uncharacterized protein LOC103494560 [Cucumis melo]	[more]
XP_004152115.1	1.4e-24	92.65	uncharacterized protein LOC101215007 [Cucumis sativus]	[more]
XP_022932694.1	1.4e-24	91.18	uncharacterized protein LOC111439163 [Cucurbita moschata] >XP_022972135.1 unchar...	[more]
XP_022145182.1	3.2e-24	89.71	uncharacterized protein LOC111014687 [Momordica charantia]	[more]

BLAST of CcUC07G143320 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC07G143320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BX44	1.8e-25	92.65	uncharacterized protein LOC103494560 OS=Cucumis melo OX=3656 GN=LOC103494560 PE=...	[more]
A0A6J1I7P7	6.9e-25	91.18	uncharacterized protein LOC111470767 OS=Cucurbita maxima OX=3661 GN=LOC111470767...	[more]
A0A6J1EXQ9	6.9e-25	91.18	uncharacterized protein LOC111439163 OS=Cucurbita moschata OX=3662 GN=LOC1114391...	[more]
A0A6J1CVS1	1.5e-24	89.71	uncharacterized protein LOC111014687 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A6P6V1L2	3.7e-18	67.65	uncharacterized protein LOC113716736 OS=Coffea arabica OX=13443 GN=LOC113716736 ...	[more]

BLAST of CcUC07G143320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48660.1	3.9e-20	67.16	Protein of unknown function (DUF 3339)	[more]
AT5G63500.1	1.9e-19	64.18	Protein of unknown function (DUF 3339)	[more]
AT5G08391.1	2.4e-17	52.94	Protein of unknown function (DUF 3339)	[more]
AT3G01940.1	2.0e-16	59.70	Protein of unknown function (DUF 3339)	[more]
AT5G40980.1	4.4e-16	56.06	Protein of unknown function (DUF 3339)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 1..67 e-value: 2.1E-30 score: 104.7
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 1..68
None	No IPR available	PANTHER	PTHR33128:SF55	PROTEIN, PUTATIVE (DUF 3339)-RELATED	coord: 1..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G143320.1	CcUC07G143320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane