CcUC07G141700 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC07G141700
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRibosomal protein L34
LocationCicolChr07: 28015525 .. 28024074 (-)
RNA-Seq ExpressionCcUC07G141700
SyntenyCcUC07G141700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAAGAAGAAAGAAAAAAAGAAAAAGAAATATACCCTAAAGCACTTTCGTTCATTCTCCCTACCCCTCTTCTTTGCTTTCGATTTCTCCTTCTCCCACCTTTGCACAGCCGCACACCGCCGCTAACCCACCGGAAATTTTCTTTCTTTTCCCATCGCTCCCCTGCGGCAGCCACACCAACCTTACATTTTGCCGCACACTGTCACCAACCTCACTGCCACGCCCATCTTTGCTTTCTAAGGGTTAGTGAGCTCGTTCTTTTGCTCATGGCGTCCAAACTTCTGATTCGGACGGGAAATTCTTTGATAAATCGATTGCGATTAAGTTCAGCGCATCAGAATAACAGGATTTGGAGTAACCAAGCTCTGTCCCATGGCCATGGCGTTGAAGTCACTCCGATGCTTTTTCCTTCAGTCTCTAAGCACCAGACTGCTCGTCATTTGCAGCAGAATGACAACGAATCGTTGAGGAAGCTCGAATCGGAAGGCATTTTCTTTCCTTTTGGGCTTCCGTCGCTCCGATTCTTCTTGCCCGATGGTATGCTATTTTTTTTTCTTGCTCTGCTTGGACTGATATTAAACGTTAATTCATAACGTATGTGGATTCTGTTTCGTTTTAATTTTCCATAGGAGTTTAAAAGTAGCTAATTTTTCACCATACATCCTTTTGTGGTAGTTTCTAATTTACATTAACTGCCTCATATAATCATAAGTTTGGAGTCTTACGTGAAAGTGGGATTGTCAAGTGTTTCTGAATTGCATGACAGTTTGCCTCTCTTGAGGTTAAGAGAAACTTTAGGGTGCGAAAACTATTAGCCAGTCACTCAAGCTTCAGAGATGACTGCTCTATTAGTCTTGAGAACCTTGTCGGCAGTGAAGATACTTGCCTGCCAGCGTCTACCCTTCACTGTGATAATGCTGAGGGTGTCTATCTACTTATTCTGTAAGGACCTGACTTTGGTTCTGGAAAATGTCATGTAAACCATGCTTGTCAGTTGAAAGTATGATATGGCAGCTCGATTTCTCGTATTTCTGGGTTATTTATTATTTTTTTGCCTTTCTTTTTGGGTTTTGCATGGGACTATGGGAGGATTAACACTGCCCATTCGATCTAGAGGCCTTACTCCATGCTCTTGGGCTCTAAGTGGTGTGTTATGTGCATCGGGTTCCATTTTCATTGTTTGATGGGGAAACGACAGAGGTCATACATTCCTTTCTTTAATCGGGGAGTTCAAGCATAGACTAGGGAGAACGGAAATTCGTTTATGGAGCCCCAACCTTTATGAGGGCTTTTCTTGTAGCTCCTTTCTTCGCTGCTTGTTGAACTCTTATCTTTTTAAAGAGTTTTCTTTTTGTTCTTTGGAAGGTAAACATCCCAAAAAAAGTGAAGTTCTTTGATTGACAGGTTATTCATGGAAAAACAGATAATCTTGATAGGCTCTCGAGGAAGACGCCTATGGTGGATGGTTTGTTTTGCTGAATATTTTGTTGAAGGCCGTTGGAAGACCTAGATCATTTACGTTGGCATTGTGATTATGCTTGGATCCTATGGAATTACTTTGGTGTGTTTGGCCTTTAGCTTGCCCTACATAGAGTCTTTAGCGATATGATTGAGGAGTTCCTCCTCCATCTGCGTTTTAGTAGAAGGGGAGATTTTTATGGCAAGCCAGGGTTTGTTCTGTATTATGGGGACTTGGGGGAGAGAAACAATAGAATCTTCAAAAGGGTTGATGGAGAGTCTTTTGATCTTTGGCCCTTGTGAGATTCCATGTTTCTCTTGAGGTGTTGGTGTCAAACTCTTTTTGTAATTGTTTGTGAGGAGTTATTTTGCTTGATTGGAGCCCATTCTATAAAGTTGCGTTAGGATACCACCTAACAAGGAAACATTCACGAAGAACACAGAAAACTCAAGTACACTCAAATATGGAAATATAGGGAAATATGTTGTAGTATTATAAGAAAGGTAACAAGATGATCTAGCCTTTTGAGAGGGTTAGTCTCTCCCCAATTCTCAAAGGAAATCTTACAAAATTCTTCGCACCTTATTCCAAACCACTCCTTCTATTTATAACTAAAAGCTTTAACAATCTTACTACCTATTTACTAATTTTACCCTTCTAATAACCATACTAATATTCTATTAATAATCCTTCTGGGTTCTCACAGGTTGCTCCCTTTCGTGGGGTTTTATTATTATTATATTTTTAATGCCCTTACATTCTTTCATTCTTTTTCGTTTTATCCAAAAGGAGGAAAAAACAAGGTGATGTGTTCTATAAATATGCTTAGTGAGTTTGGACCATGTACTTTGGAGCCATAACTTTGCCACCTTGATTTGGGGTGTTTTTCTGGAGAACTTAGGTGTTCCCTCAGCTAAATAGTGAGGAGTTTTGTACATAATAAAGCGAGGAGCTTTGTGGAAAACAGTCTTCCTTGCTATTTTGTGGTATATCTAACCTTGAGAGAAATTGGATGATCTTTATCCACACCTCAAGGACAAGGTGTGTTTTGTGGCGGGTTGATGATAGGATTAGGAAGTAGATAAAATATGGTAATTAGGAGGGTGGTTCGTTGGGTGTTTCTTGGGGAGATCTAGCAACAAGAGAAGGTAGGAAAAATGTGGGAGTACTAGTTAGGGGTATATGGGTAGGATTAGTGTGGTATTAATAAGGGCTTAAGGGTAATTAAGGACCTTAGGGGGTCTGAGAATTTGGGTAGTGTCCTTTGTGGGACTTTGGGAGAAAGAGCCCTCTCAAAAGGCTATTATATTATAATTTCTTTACCGATATTGCAATATGGGTATCTTTAGTGTTTTCTTGTATTTTTTGTGTCCGGCTACCTAACAAATTGGTATTAGAGCACGTTTCTTCTAGTTGCCTTCATTTTGACTATGGATTTGGATGTGGAAGTGCTCGATTGTGTGTTAAATAGGTTGTTGGAGGTACAAAGGAAGTTGGATCCAATACAAAAAGAGTTTAAGGATTTCAATGAACGATGCATGAAAGTGAGAGAAAGAGAACAAGAACGATTGACAACAATCGAGGCTGTGAAAGAAAATGAGAGTTTCCCTATTTCATTCACTCATTGAAATGTTTCTTTATTCAAAAAAAGAAAGAAAATGAAATCAGGGAAAAATTGATTGGATCAAAGATCAACCACAACCTTGTTTAGAAACTATCAAATTGTAAGTGCAATCGAATTTTGGCTGGAAGGTGTCGATCTTAGTTGAGGACACCTTTGAAAACGTGAGGGAAAACCAATCGAAGAGGCAAAAGAGAAGGAAGGAAAGAGGAATTGTTGGCATAGACGGAGTCGAAAAGCAACAAAGCGAGAGGAGGAAGAACCTGCTGATGAACTAGTGGTCGGAGAGGCTAGGTAGTGTGTAGACGAAGGAACATTGGAGGAATAACCATTTGGTGGTCAAATGGTCAGTAGGGGAAAGCGACGTTGCGAGTTTCGTGAAGAGAGGGTGAAGAGATTGGAGAGGGACAACCATGAAGGAACCATTGAAGGAGATCACTACTGGCGACAATTGTGGGTGTGGCCAAAGAAAAGGTCCCTAAGAAGTCGGTGAGGCAAGATTCGTTTGCTAGCAAGTATCCATGGTGATAGGTTAGAAACTGAAGAAAAGAAAAGTCAGGAAGTTGGGGTTGGGTTGAAAAACCCTATCTCTATTCGGGTGACAACAAAATGTGTTGGAAAGGGATATGGCTGTTGACTTCTTAATTATGGGCTGGGTAAGTTATGCTTTAATGGGCTGGATTTTAACCATGGGGATGAGGCCCATTCTCTTGCAAAGTCAGAAAACAAGATTGTTTTACAACATGGGTTTCGATTCAGGTTGTTCTTTGTTTTAAACCCAAGACCCACCCGTTATGGAAATACTGTCCTCATGAGAAGTAACTAATCCTAAACTGCACAGTGTTTTGCTCTTCATCCATGCTGCCAACCATTACAACTGGGCAAACAAACAAGAGTGACCATTGACACCATTTGCCACCGCCTGCACCTCCACCACTCGCCACCATCTGCCGCTCTTGATCGTTAGAGTGCTGACCAACAATTTTCAGTTTCAGCTTCTGATGGGCATTAGACTATGTGATTTTGTTGTAAAAGAAATTTTCAGTTTCGGCTTCTGATGGGTATTGGATTATGTGATTTTGTTGTAAAAAAAAGGTATTATTTGATTGTTACCCAATTTCATGATCGTGTTTTGATAAGCACACTTTGAGCACAAGGTCTTTTCTGAAGGGTGGGGTAGTGTGGCAATACTAGTTAGGGGTATATGGGTAAGATTAGTATGATATTAGTAAGGGTTTAAGGGTAATTAGCAAGCGGTGCTTGGTTATAAATAGAGGTGTTAAGGACCTTAGGGGGTGAAAAATTTGGGTAGTGCCCTTAGTGGAACTTCGAGAGAAATATCCCTCTCAAGAGGCTATTATATTGTAATTTCTTTACTGATATTGCAATATAGTTATCCTTAGTGTTCTTTTGTATTTTTTGCATCCGAGTTCCTAACACAGTGTTGTGATAGTTTAACTCTCATTTTCAGCATTTTTGAGAGAGATCTCTCTTTAGCTTTCTCGATGGGTGTGCACTGCAAGTTGAGCATCTGAATAAAGAAAAACTTGTTTTAAGTGTTTGTAAATATTTTGACCTTCCTGCATGGCTGTCCAAGTTATGTATATGGATTCCCTTCATTAAATTAAGCTTTGTAGATAACAATTTGTTGGGCTCAGATGATAGTTTAACCTGTCATTGCTTCTTTGTATTGTTATTTTTATCAAGGCACAATTTTTTTTACTTTCTGCAGGAGATGCTTCTTCGACTCAAGAACCAATGCTCTTATTTCCTAAAAGGACTTTTCAACCTAGCATCATCAGGCGAAAAAGGAATCATGGATTTTTTGCCCGGTATCTCCATTGCCGTTTCTTCTTTTATGTAATGTTTTTAAAAGGAGAATTTATAATTTGCAAACAATGCTATTCTTTGCTTAAACATGCTTGGTAGAGGTTCAGGAAGAAACATGAGGAATCAATGAAATGAAAAAAGGAGCCAAAACACTCATGATCACCAATAGGTATAGAGGTATAGGTGGATTACAAGAATGATCGCCCATTTGAGATTAAAAAAGAAAGGCTAAAAGCACTTAAGGGATGTTTACATTTAGACCAAAAAAGAAAGAGTATTAGAAGTAATCAAATCCACAACACTATAGAAGATGGAGTGATGATCATTGAAACCTCACTCATTCCTCTCACACCAGAAAATTCAAAAGAACATTTAGTTGAAAGCAAGCCAAAGGGTCTTCCTTTCTAAAATGGTATCCCACAAAAACACAAGCCAAAGAATTGAAAATAGTTACAGGCATGGCCAAATTCCACCCAGAAGCTTCTGACATAAAATTCCAATAGGGAAGTGCAAAAGGGAAACAACCAAAAAGATGCGCTAGAGATTTGGCATTCGTGTTACACATAACCCACCAAGAAGAAGAAAGAGAGAAATGAGGCATCCTTCTTTGAAGACGGTCTGCCATATTGTTCTCTACTATGACAGTTCTCATAGAAAAATTTTAATTTTCTGAGCATAAGGGTCTTTCTATATGTTCAAATAAAGATTTATTTTTTTATTTTTATTTGTTGAAACATAAAAATTGTTGATGAGCCATTGACATGTACTAAATTTTCCATTAAGGAACTAATGGAATACTTCTTTGGGAGTATAAGAGGCCAATACCAAAAATCACTTATTTTAGTTAGATTGATGGTAGGAAGGTGGGAGAGACCAGCCTACACCAAAATTTCCTCATCTTGACTTCACCAAGACCCAAGTCCCGAGCAAGATGTATGAAGTTGCAACAATCTGCTATAATACCACTGGGGGCCTACTGGACAGCCTGTATGACCGGGGAAATGAAGATGCAATAACACCACAATCGAGCAATAAATTAGTCCAAAACGAAAGTATAATAACCATTGCCAATCCTCCTTTCGATACGATCCTTAATCAGTTGGGCAGTAGAGCATATGAATCTCCTTGGTGCCTTAGAATGAGTTCTAAATATACGAGCTGGGCTAACAAATCAGCCACTGCTTTATAATACTTGGCAATGGCCTTGATGATTTGGCGCCAAACAGTGTTTTCTTCAGGTAGAAACCTTCAGATCCCCCATTTATCAAGGACGGCATCATTCTTAGGCTTTATATCACCAATGCCTAGGCCACCCATGAATAAGGGAGGCTGAATTCTTAGTTAATATTTATGCAAGCCATCACCACTAGATCCCTCCACACACCAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAAGAAAAAATAAAAAAAAAAAAAAAAAAAAATCTTTAAAGAGCTTCTCCATGGATTTTGCAACCCTGTTAGAAAATGTGGCTGAATGAGTGCATGCCAACCGCCCTTGGAGAATTACACATATTTCGAATTATAAGGCTTCTGGTGAATTCTTTCATTGACCAGCTACCAAATCATAGAACTACTCTTTCGAATACCACCCAAAATAAGAGCAAAATAGGTGGAAGGCCAAGTACCTAGCTTACATAGCTTACAATCAAATTTCCCATTCAAAAAGGATAATTCTGACCGATTAAAATAAGTGCCAACATTTCACTCTTGCCATAATTTATATTCAACCCTGAAGTAGCATCACTGGTTGACCCACCTTCCTTAATACTTAACTAGCTTATCTGCAATCGATTTGTGGCCTTTGTTTGGAGTAAAGAGAAAAGAAAAGTTACCAGGCCACGGAAATTAGTTTGGCTGGCTAAATTAGCTTAGAAGGGAATGTAATAATTTATTTCAAAATGTGCATTAAAATTCGCTTGTTCTTCTTTGAGCAGCAAAGCAACCAAGGGTGGACGGAAAGTTATTGCTCGAAGGATTGCAAAGGGTCGATCAAGAATAACTGCATAATGTTCATCTCAAGTCAGGTCCATTTGAATTGCCCTGCCAAAATCTTGTGTAGGCTACGTTAGTTTTTTCTTTAATTAACTCAAAAGAATTGCTATCACTGGCTGAATAACCCCCTTTATTATCGGTAGTCTTCTTAGGCCTCGGAATACAGACTGTATAAACTTCTCTGTTTTTCAGAATTACCATGCATAAAACCTTCCATATTGAAGTTTCAGTTACTTTTATTTTTATTTCTTTCTTAACTTGGCTACGAAACAGTTTACTTTCGGTTCATGGTGGCTGCTGATGCTGCACAGAGCAAATAAACATAACTTAAGCGTGTGAAAGGTGCAAAAAGGAACAGAATGTGAGGTTTTAAGTCATTTTATGACTAAAGCCATTAACTTATCTGAATTCAGGCTGGGTTTGGATATCGTTTTTTTGTTTAAAATTCATTTTTCTCTTATAAAAAAGAAATTATAAATATTATTTTGTACCTTGTATTTTCGGCTTCAGTTGATTTTAATCCTATACTTTCGAATCATCCATTATTCATTTCATTTTTGTCTCCATACTTTTAAAAAGTTATTATTTCATTCTTTCAAATTCACTTTTATCTAATTTCTTTTCATTGTGATGCTAAAATTTAAATACAAAGATTAAAACAGTATTACAAAAGTTGGAAGTATAGGGATGAAAATAAACCAAAATGAAAAGTACGAGAAAAGTATAAAGATAAAAAAGTGTTTGAACTTTACTCTCTCTCTAAATGTAGGTTACTCTCAACTATAGAAGCTGTTTGATATGTTGCATTTTAAAAAATGTCAAGATACGGGTGAAGGCAAACAGGTGTTGACAGGGAATTTCCAACATACTCAAAGATTAGACATTCAAAATTGAAATAATTGTATCAAGCTATGTGTAGTTCAGTGCCTATCTTTAGGACACTGGAGTATGCAGTTGCCATAAATGCATGGCCCCATAATTATTATACAACCTGA

mRNA sequence

TAAAAAGAAGAAAGAAAAAAAGAAAAAGAAATATACCCTAAAGCACTTTCGTTCATTCTCCCTACCCCTCTTCTTTGCTTTCGATTTCTCCTTCTCCCACCTTTGCACAGCCGCACACCGCCGCTAACCCACCGGAAATTTTCTTTCTTTTCCCATCGCTCCCCTGCGGCAGCCACACCAACCTTACATTTTGCCGCACACTGTCACCAACCTCACTGCCACGCCCATCTTTGCTTTCTAAGGGTTAGTGAGCTCGTTCTTTTGCTCATGGCGTCCAAACTTCTGATTCGGACGGGAAATTCTTTGATAAATCGATTGCGATTAAGTTCAGCGCATCAGAATAACAGGATTTGGAGTAACCAAGCTCTGTCCCATGGCCATGGCGTTGAAGTCACTCCGATGCTTTTTCCTTCAGTCTCTAAGCACCAGACTGCTCGTCATTTGCAGCAGAATGACAACGAATCGTTGAGGAAGCTCGAATCGGAAGGCATTTTCTTTCCTTTTGGGCTTCCGTCGCTCCGATTCTTCTTGCCCGATGGAGATGCTTCTTCGACTCAAGAACCAATGCTCTTATTTCCTAAAAGGACTTTTCAACCTAGCATCATCAGGCGAAAAAGGAATCATGGATTTTTTGCCCGTTCAGTGCCTATCTTTAGGACACTGGAGTATGCAGTTGCCATAAATGCATGGCCCCATAATTATTATACAACCTGA

Coding sequence (CDS)

ATGGCGTCCAAACTTCTGATTCGGACGGGAAATTCTTTGATAAATCGATTGCGATTAAGTTCAGCGCATCAGAATAACAGGATTTGGAGTAACCAAGCTCTGTCCCATGGCCATGGCGTTGAAGTCACTCCGATGCTTTTTCCTTCAGTCTCTAAGCACCAGACTGCTCGTCATTTGCAGCAGAATGACAACGAATCGTTGAGGAAGCTCGAATCGGAAGGCATTTTCTTTCCTTTTGGGCTTCCGTCGCTCCGATTCTTCTTGCCCGATGGAGATGCTTCTTCGACTCAAGAACCAATGCTCTTATTTCCTAAAAGGACTTTTCAACCTAGCATCATCAGGCGAAAAAGGAATCATGGATTTTTTGCCCGTTCAGTGCCTATCTTTAGGACACTGGAGTATGCAGTTGCCATAAATGCATGGCCCCATAATTATTATACAACCTGA

Protein sequence

MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQQNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHGFFARSVPIFRTLEYAVAINAWPHNYYTT
Homology
[Close]
BLAST of CcUC07G141700 vs. NCBI nr
Match: XP_004141160.2 (uncharacterized protein LOC101210601 [Cucumis sativus] >XP_031738493.1 uncharacterized protein LOC101210601 [Cucumis sativus] >KGN59796.1 hypothetical protein Csa_001175 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 1.6e-57
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQ 60
           MASKLLIRTG+SL+NRLRLSSAHQNNRIW +QALSHGHGVEVTPMLFPSVSKHQTA  LQ
Sbjct: 77  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 136

Query: 61  QNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHG 120
           QND ESLR+L+SEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPS IRRKRNHG
Sbjct: 137 QNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHG 196

Query: 121 FFAR 125
           FFAR
Sbjct: 197 FFAR 200

[Close]
BLAST of CcUC07G141700 vs. NCBI nr
Match: XP_022955351.1 (uncharacterized protein LOC111457406 isoform X1 [Cucurbita moschata])

HSP 1 Score: 231.5 bits (589), Expect = 4.7e-57
Identity = 113/124 (91.13%), Postives = 117/124 (94.35%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQ 60
           MASKLLIRTGNSL+NRLRLSS HQNN IWS+Q+LS GHGV+VTPMLFPSVSKHQTA HLQ
Sbjct: 1   MASKLLIRTGNSLMNRLRLSSTHQNNWIWSSQSLSQGHGVDVTPMLFPSVSKHQTAHHLQ 60

Query: 61  QNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHG 120
           QND ESLRKLESEGIFFPFGLPSLRFFLPDGD SSTQEPMLLFPKRTFQPS IRRKRNHG
Sbjct: 61  QNDTESLRKLESEGIFFPFGLPSLRFFLPDGDTSSTQEPMLLFPKRTFQPSTIRRKRNHG 120

Query: 121 FFAR 125
           FFAR
Sbjct: 121 FFAR 124

[Close]
BLAST of CcUC07G141700 vs. NCBI nr
Match: KAG7018271.1 (hypothetical protein SDJN02_20139, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231.5 bits (589), Expect = 4.7e-57
Identity = 113/124 (91.13%), Postives = 117/124 (94.35%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQ 60
           MASKLLIRTGNSL+NRLRLSS HQNN IWS+Q+LS GHGV+VTPMLFPSVSKHQTA HLQ
Sbjct: 1   MASKLLIRTGNSLMNRLRLSSTHQNNWIWSSQSLSQGHGVDVTPMLFPSVSKHQTAHHLQ 60

Query: 61  QNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHG 120
           QND ESLRKLESEGIFFPFGLPSLRFFLPDGD SSTQEPMLLFPKRTFQPS IRRKRNHG
Sbjct: 61  QNDTESLRKLESEGIFFPFGLPSLRFFLPDGDTSSTQEPMLLFPKRTFQPSTIRRKRNHG 120

Query: 121 FFAR 125
           FFAR
Sbjct: 121 FFAR 124

[Close]
BLAST of CcUC07G141700 vs. NCBI nr
Match: XP_022955352.1 (uncharacterized protein LOC111457406 isoform X2 [Cucurbita moschata] >XP_022955353.1 uncharacterized protein LOC111457406 isoform X2 [Cucurbita moschata])

HSP 1 Score: 231.5 bits (589), Expect = 4.7e-57
Identity = 113/124 (91.13%), Postives = 117/124 (94.35%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQ 60
           MASKLLIRTGNSL+NRLRLSS HQNN IWS+Q+LS GHGV+VTPMLFPSVSKHQTA HLQ
Sbjct: 1   MASKLLIRTGNSLMNRLRLSSTHQNNWIWSSQSLSQGHGVDVTPMLFPSVSKHQTAHHLQ 60

Query: 61  QNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHG 120
           QND ESLRKLESEGIFFPFGLPSLRFFLPDGD SSTQEPMLLFPKRTFQPS IRRKRNHG
Sbjct: 61  QNDTESLRKLESEGIFFPFGLPSLRFFLPDGDTSSTQEPMLLFPKRTFQPSTIRRKRNHG 120

Query: 121 FFAR 125
           FFAR
Sbjct: 121 FFAR 124

[Close]
BLAST of CcUC07G141700 vs. NCBI nr
Match: XP_008447614.1 (PREDICTED: uncharacterized protein LOC103490028 [Cucumis melo])

HSP 1 Score: 231.1 bits (588), Expect = 6.2e-57
Identity = 113/124 (91.13%), Postives = 117/124 (94.35%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQ 60
           MASKLLIRTGNS +NRLRLSSAHQNNRIW +QALSHGHGVEVTPMLFPSVSKHQ A  LQ
Sbjct: 1   MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQ 60

Query: 61  QNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHG 120
           QND ESLR+L+SEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPS IRRKRNHG
Sbjct: 61  QNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHG 120

Query: 121 FFAR 125
           FFAR
Sbjct: 121 FFAR 124

[Close]
BLAST of CcUC07G141700 vs. ExPASy TrEMBL
Match: A0A0A0LIB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G847215 PE=3 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 7.9e-58
Identity = 114/124 (91.94%), Postives = 119/124 (95.97%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQ 60
           MASKLLIRTG+SL+NRLRLSSAHQNNRIW +QALSHGHGVEVTPMLFPSVSKHQTA  LQ
Sbjct: 77  MASKLLIRTGSSLMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQTAHPLQ 136

Query: 61  QNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHG 120
           QND ESLR+L+SEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPS IRRKRNHG
Sbjct: 137 QNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHG 196

Query: 121 FFAR 125
           FFAR
Sbjct: 197 FFAR 200

[Close]
BLAST of CcUC07G141700 vs. ExPASy TrEMBL
Match: A0A6J1GTQ0 (uncharacterized protein LOC111457406 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457406 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.3e-57
Identity = 113/124 (91.13%), Postives = 117/124 (94.35%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQ 60
           MASKLLIRTGNSL+NRLRLSS HQNN IWS+Q+LS GHGV+VTPMLFPSVSKHQTA HLQ
Sbjct: 1   MASKLLIRTGNSLMNRLRLSSTHQNNWIWSSQSLSQGHGVDVTPMLFPSVSKHQTAHHLQ 60

Query: 61  QNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHG 120
           QND ESLRKLESEGIFFPFGLPSLRFFLPDGD SSTQEPMLLFPKRTFQPS IRRKRNHG
Sbjct: 61  QNDTESLRKLESEGIFFPFGLPSLRFFLPDGDTSSTQEPMLLFPKRTFQPSTIRRKRNHG 120

Query: 121 FFAR 125
           FFAR
Sbjct: 121 FFAR 124

[Close]
BLAST of CcUC07G141700 vs. ExPASy TrEMBL
Match: A0A6J1GTJ1 (uncharacterized protein LOC111457406 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457406 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 2.3e-57
Identity = 113/124 (91.13%), Postives = 117/124 (94.35%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQ 60
           MASKLLIRTGNSL+NRLRLSS HQNN IWS+Q+LS GHGV+VTPMLFPSVSKHQTA HLQ
Sbjct: 1   MASKLLIRTGNSLMNRLRLSSTHQNNWIWSSQSLSQGHGVDVTPMLFPSVSKHQTAHHLQ 60

Query: 61  QNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHG 120
           QND ESLRKLESEGIFFPFGLPSLRFFLPDGD SSTQEPMLLFPKRTFQPS IRRKRNHG
Sbjct: 61  QNDTESLRKLESEGIFFPFGLPSLRFFLPDGDTSSTQEPMLLFPKRTFQPSTIRRKRNHG 120

Query: 121 FFAR 125
           FFAR
Sbjct: 121 FFAR 124

[Close]
BLAST of CcUC07G141700 vs. ExPASy TrEMBL
Match: A0A1S3BHV7 (uncharacterized protein LOC103490028 OS=Cucumis melo OX=3656 GN=LOC103490028 PE=3 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 3.0e-57
Identity = 113/124 (91.13%), Postives = 117/124 (94.35%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQ 60
           MASKLLIRTGNS +NRLRLSSAHQNNRIW +QALSHGHGVEVTPMLFPSVSKHQ A  LQ
Sbjct: 1   MASKLLIRTGNSFMNRLRLSSAHQNNRIWGSQALSHGHGVEVTPMLFPSVSKHQIAHPLQ 60

Query: 61  QNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHG 120
           QND ESLR+L+SEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPS IRRKRNHG
Sbjct: 61  QNDTESLRQLQSEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSTIRRKRNHG 120

Query: 121 FFAR 125
           FFAR
Sbjct: 121 FFAR 124

[Close]
BLAST of CcUC07G141700 vs. ExPASy TrEMBL
Match: A0A6J1IXD9 (uncharacterized protein LOC111480019 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480019 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.3e-56
Identity = 112/124 (90.32%), Postives = 116/124 (93.55%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRLRLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQ 60
           MASKLLIRTGNSL+NRLRLSS  QNN IWS+Q+LS GHGV+VTPMLFPSVSKHQTA HLQ
Sbjct: 1   MASKLLIRTGNSLMNRLRLSSTLQNNWIWSSQSLSQGHGVDVTPMLFPSVSKHQTAHHLQ 60

Query: 61  QNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKRNHG 120
           QND ESLRKLESEGIFFPFGLPSLRFFLPDGD SSTQEPMLLFPKRTFQPS IRRKRNHG
Sbjct: 61  QNDTESLRKLESEGIFFPFGLPSLRFFLPDGDTSSTQEPMLLFPKRTFQPSTIRRKRNHG 120

Query: 121 FFAR 125
           FFAR
Sbjct: 121 FFAR 124

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BLAST of CcUC07G141700 vs. TAIR 10
Match: AT3G13882.1 (Ribosomal protein L34 )

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 68/127 (53.54%), Postives = 85/127 (66.93%), Query Frame = 0 

Query: 1   MASKLLIRTGNSLINRL---RLSSAHQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTAR 60
           MA+K LIR+G SL+NR      ++  QNN   S Q ++   G E+ P  FPS+S  Q++ 
Sbjct: 1   MAAKTLIRSGASLMNRFLTKPTTNIVQNNLRSSFQYIA-PQGQEIPPYFFPSLSNLQSSL 60

Query: 61  HLQQNDNESLRKLESEGIFFPFGLPSLRFFLPDGDASSTQEPMLLFPKRTFQPSIIRRKR 120
             + ND  SL++L   G  +P GLPSL FFLP+ D SS  EP+LLFPKRTFQPS IRRKR
Sbjct: 61  ISRPNDTASLQELNERGFLYPSGLPSLEFFLPEVDPSS--EPLLLFPKRTFQPSTIRRKR 120

Query: 121 NHGFFAR 125
           NHGFFAR
Sbjct: 121 NHGFFAR 124

[Close]
BLAST of CcUC07G141700 vs. TAIR 10
Match: AT3G13882.2 (Ribosomal protein L34 )

HSP 1 Score: 85.5 bits (210), Expect = 3.9e-17
Identity = 57/147 (38.78%), Postives = 70/147 (47.62%), Query Frame = 0 

Query: 23  HQNNRIWSNQALSHGHGVEVTPMLFPSVSKHQTARHLQQNDNESLRKLESEGIFFPFGLP 82
           +QNN   S Q ++   G E+ P  FPS+S  Q++   + ND  SL++L   G  +P GLP
Sbjct: 33  NQNNLRSSFQYIA-PQGQEIPPYFFPSLSNLQSSLISRPNDTASLQELNERGFLYPSGLP 92

Query: 83  SLRFFLP--------DGDASS-------------------------------------TQ 125
           SL FFLP        D   SS                                     + 
Sbjct: 93  SLEFFLPEVYAMQSLDARESSALYCSLALRLLVSAKLYIFAARWYLSNVFVFGNVVDPSS 152

The following BLAST results are available for this feature:
BLAST of CcUC07G141700 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141160.21.6e-5791.94uncharacterized protein LOC101210601 [Cucumis sativus] >XP_031738493.1 uncharact... [more]
XP_022955351.14.7e-5791.13uncharacterized protein LOC111457406 isoform X1 [Cucurbita moschata][more]
KAG7018271.14.7e-5791.13hypothetical protein SDJN02_20139, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022955352.14.7e-5791.13uncharacterized protein LOC111457406 isoform X2 [Cucurbita moschata] >XP_0229553... [more]
XP_008447614.16.2e-5791.13PREDICTED: uncharacterized protein LOC103490028 [Cucumis melo][more]
BLAST of CcUC07G141700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC07G141700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LIB67.9e-5891.94Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G847215 PE=3 SV=1[more]
A0A6J1GTQ02.3e-5791.13uncharacterized protein LOC111457406 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GTJ12.3e-5791.13uncharacterized protein LOC111457406 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A1S3BHV73.0e-5791.13uncharacterized protein LOC103490028 OS=Cucumis melo OX=3656 GN=LOC103490028 PE=... [more]
A0A6J1IXD94.3e-5690.32uncharacterized protein LOC111480019 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of CcUC07G141700 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13882.11.2e-2653.54Ribosomal protein L34 [more]
AT3G13882.23.9e-1738.78Ribosomal protein L34 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000271Ribosomal protein L34PFAMPF00468Ribosomal_L34coord: 105..124
e-value: 7.0E-7
score: 29.1
IPR000271Ribosomal protein L34PANTHERPTHR14503MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBERcoord: 1..124
NoneNo IPR availableGENE3D1.10.287.3980coord: 103..126
e-value: 9.9E-7
score: 30.5
NoneNo IPR availablePANTHERPTHR14503:SF8RIBOSOMAL PROTEIN L34coord: 1..124
IPR020939Ribosomal protein L34, conserved sitePROSITEPS00784RIBOSOMAL_L34coord: 105..124

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC07G141700.1CcUC07G141700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome