CcUC07G141300 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC07G141300
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionCharged multivesicular body protein 1
LocationCicolChr07: 27554547 .. 27555506 (-)
RNA-Seq ExpressionCcUC07G141300
SyntenyCcUC07G141300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTAACACGGAGAAATTGTTGAATCAGATCATGGAATTGAAATTTACGGCGAAATCACTGCAACGCCAAGCGAGAAAGTGCGAGAAGGAGGAAAAATCCGAGAAGCTCAAGATCAAGAAGGCTATGGAGAAGGGAAACATGGATGGAGCACGAATTTATGCTGAGAATGCAATCCGGAAGCGTACGGAGCAGATGAACTACCTCCGGCTCGCTTCGCGGCTCGATGCCGTTGTGGCTCGTCTCGATACGCAGGCGAAGATGTCCACCATAAACAAGTCTATGGGCTCGATCGTCAAGTCCTTGGAAAGTACTTTGGCCACTGGTAATTTGCAGAAGATGTCGGAAACCATGGATCAATTTGAGAAGCAATTTGTGAACATGGAAGTCCAGGCTGAGTTTATGGAGAATGCAATGGCGGGTTCAACTTCTCTTTCGACTCCAGAGGGAGAGGTAAACAGCTTGATGCAACAGGTGGCCGACGATTATGGATTGGAGGTTTCTGTGGGTCTTCCACAGCCGGCAGGTCACGCTGTTCCGGCCAGGGAGACTGAGAAAATCGACGAGGACGACTTGTCAAGGCGGCTTGCTGAGCTTAAGGCCAGAGGGTAACAATTTATGCTAGAACTATGATCTGCGATTTGTAAAATCTACATATTTCATTACTGACTTGTATTTTAGTATCTACGAGAACTTATAATATGTATAAATTTGAAGCATTGGATATGTGATATGCTTATTGCACACTGCATTGCATATTACAACTGAAGTCTTTTCGAGAATAATCCTTCCCATCATGTTTATTTGAGTATTTGGGTTGATAACTCTTACCATCTTGGGATGTGTCTCAGAGTTGGAAGTTCATTTTGTTTCAAGCTGTTCTTGGGCAGGTTGGCATTCAACTTTCTTGGAAGTTTTGGAGAGAGAGATGAGAGTTCTTATTTAGAATTGAAAACATGA

mRNA sequence

ATGGGTAACACGGAGAAATTGTTGAATCAGATCATGGAATTGAAATTTACGGCGAAATCACTGCAACGCCAAGCGAGAAAGTGCGAGAAGGAGGAAAAATCCGAGAAGCTCAAGATCAAGAAGGCTATGGAGAAGGGAAACATGGATGGAGCACGAATTTATGCTGAGAATGCAATCCGGAAGCGTACGGAGCAGATGAACTACCTCCGGCTCGCTTCGCGGCTCGATGCCGTTGTGGCTCGTCTCGATACGCAGGCGAAGATGTCCACCATAAACAAGTCTATGGGCTCGATCGTCAAGTCCTTGGAAAGTACTTTGGCCACTGGTAATTTGCAGAAGATGTCGGAAACCATGGATCAATTTGAGAAGCAATTTGTGAACATGGAAGTCCAGGCTGAGTTTATGGAGAATGCAATGGCGGGTTCAACTTCTCTTTCGACTCCAGAGGGAGAGGTAAACAGCTTGATGCAACAGGTGGCCGACGATTATGGATTGGAGGTTTCTGTGGGTCTTCCACAGCCGGCAGGTCACGCTGTTCCGGCCAGGGAGACTGAGAAAATCGACGAGGACGACTTGTCAAGGCGGCTTGCTGAGCTTAAGGCCAGAGGGTTGGCATTCAACTTTCTTGGAAGTTTTGGAGAGAGAGATGAGAGTTCTTATTTAGAATTGAAAACATGA

Coding sequence (CDS)

ATGGGTAACACGGAGAAATTGTTGAATCAGATCATGGAATTGAAATTTACGGCGAAATCACTGCAACGCCAAGCGAGAAAGTGCGAGAAGGAGGAAAAATCCGAGAAGCTCAAGATCAAGAAGGCTATGGAGAAGGGAAACATGGATGGAGCACGAATTTATGCTGAGAATGCAATCCGGAAGCGTACGGAGCAGATGAACTACCTCCGGCTCGCTTCGCGGCTCGATGCCGTTGTGGCTCGTCTCGATACGCAGGCGAAGATGTCCACCATAAACAAGTCTATGGGCTCGATCGTCAAGTCCTTGGAAAGTACTTTGGCCACTGGTAATTTGCAGAAGATGTCGGAAACCATGGATCAATTTGAGAAGCAATTTGTGAACATGGAAGTCCAGGCTGAGTTTATGGAGAATGCAATGGCGGGTTCAACTTCTCTTTCGACTCCAGAGGGAGAGGTAAACAGCTTGATGCAACAGGTGGCCGACGATTATGGATTGGAGGTTTCTGTGGGTCTTCCACAGCCGGCAGGTCACGCTGTTCCGGCCAGGGAGACTGAGAAAATCGACGAGGACGACTTGTCAAGGCGGCTTGCTGAGCTTAAGGCCAGAGGGTTGGCATTCAACTTTCTTGGAAGTTTTGGAGAGAGAGATGAGAGTTCTTATTTAGAATTGAAAACATGA

Protein sequence

MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQFEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVPARETEKIDEDDLSRRLAELKARGLAFNFLGSFGERDESSYLELKT
Homology
BLAST of CcUC07G141300 vs. NCBI nr
Match: KAE8651298.1 (hypothetical protein Csa_002473 [Cucumis sativus])

HSP 1 Score: 374.0 bits (959), Expect = 9.0e-100
Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTEQMNYLRL+SRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HAVP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 181 ARETEKIDEDDLSRRLAELKARGLAFN 208
           ARETEKIDEDDLSRRLAELKARGL  N
Sbjct: 181 ARETEKIDEDDLSRRLAELKARGLLEN 207

BLAST of CcUC07G141300 vs. NCBI nr
Match: XP_004146833.1 (ESCRT-related protein CHMP1B [Cucumis sativus] >XP_008447589.1 PREDICTED: ESCRT-related protein CHMP1B-like [Cucumis melo] >KAA0061110.1 ESCRT-related protein CHMP1B [Cucumis melo var. makuwa])

HSP 1 Score: 371.3 bits (952), Expect = 5.8e-99
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTEQMNYLRL+SRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HAVP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
           ARETEKIDEDDLSRRLAELKARG
Sbjct: 181 ARETEKIDEDDLSRRLAELKARG 203

BLAST of CcUC07G141300 vs. NCBI nr
Match: XP_022949550.1 (ESCRT-related protein CHMP1B-like [Cucurbita moschata] >XP_022998305.1 ESCRT-related protein CHMP1B-like [Cucurbita maxima] >XP_023523585.1 ESCRT-related protein CHMP1B-like [Cucurbita pepo subsp. pepo] >KAG6606731.1 ESCRT-related protein CHMP1A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036449.1 ESCRT-related protein CHMP1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370.9 bits (951), Expect = 7.6e-99
Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTEQMNYLRLASRLDAVVARLDTQAKMSTINK+MGSIVKSLESTLATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKAMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
            RETEKIDEDDL+RRLAELKARG
Sbjct: 181 TRETEKIDEDDLTRRLAELKARG 203

BLAST of CcUC07G141300 vs. NCBI nr
Match: XP_022148096.1 (ESCRT-related protein CHMP1B-like isoform X1 [Momordica charantia])

HSP 1 Score: 369.8 bits (948), Expect = 1.7e-98
Identity = 200/203 (98.52%), Postives = 201/203 (99.01%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVN+LMQQVADDYGLEVSVGLPQPA HAVP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNTLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
            RETEKIDEDDLSRRLAELKARG
Sbjct: 181 TRETEKIDEDDLSRRLAELKARG 203

BLAST of CcUC07G141300 vs. NCBI nr
Match: XP_038878614.1 (ESCRT-related protein CHMP1B-like [Benincasa hispida])

HSP 1 Score: 369.8 bits (948), Expect = 1.7e-98
Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLE+TLATGNLQKMSETMD+
Sbjct: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLETTLATGNLQKMSETMDR 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HAVP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
           ARETEKIDEDDLSRRLAELKARG
Sbjct: 181 ARETEKIDEDDLSRRLAELKARG 203

BLAST of CcUC07G141300 vs. ExPASy Swiss-Prot
Match: Q9SSM4 (ESCRT-related protein CHMP1B OS=Arabidopsis thaliana OX=3702 GN=CHMP1B PE=1 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.7e-93
Identity = 181/203 (89.16%), Postives = 196/203 (96.55%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNT+KL+NQI +LKFT+KSLQRQ+RKCEKEEK+EKLK+KKA+EKGNMDGARIYAENAIR
Sbjct: 1   MGNTDKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KR+EQMNYLRLASRLDAVVARLDTQAKM+TI KSM +IVKSLES+LATGNLQKMSETMD 
Sbjct: 61  KRSEQMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDS 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
            +  EK+DEDDLSRRLAELKARG
Sbjct: 181 TKTEEKVDEDDLSRRLAELKARG 203

BLAST of CcUC07G141300 vs. ExPASy Swiss-Prot
Match: Q8LE58 (ESCRT-related protein CHMP1A OS=Arabidopsis thaliana OX=3702 GN=CHMP1A PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.2e-92
Identity = 178/203 (87.68%), Postives = 195/203 (96.06%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNT+KL+NQI ELKFT+KSLQRQARKCEKEE+SEKLK+KKA+EKGNMDGARIYAENAIR
Sbjct: 1   MGNTDKLMNQIFELKFTSKSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KR+EQMNYLRL+SRLDAVVARLDTQAKM+TI KSM +IVKSLES+L TGNLQKMSETMD 
Sbjct: 61  KRSEQMNYLRLSSRLDAVVARLDTQAKMATITKSMTNIVKSLESSLTTGNLQKMSETMDS 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFM+NAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHA+P
Sbjct: 121 FEKQFVNMEVQAEFMDNAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
            +  EK++EDDL+RRLAELKARG
Sbjct: 181 TKTEEKVEEDDLTRRLAELKARG 203

BLAST of CcUC07G141300 vs. ExPASy Swiss-Prot
Match: Q84VG1 (ESCRT-related protein CHMP1 OS=Oryza sativa subsp. japonica OX=39947 GN=CHMP1 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 4.5e-86
Identity = 175/205 (85.37%), Postives = 187/205 (91.22%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGN EKL+ QI +LKFT+KSLQRQARKCEKEEK +KLK+KKA+EKGNMDGARIYAENAIR
Sbjct: 1   MGNPEKLMTQIFDLKFTSKSLQRQARKCEKEEKEQKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTE MNYLRLASRLDAVVARLDTQAKM  I KSM +IVKSL+S LATGNLQKMSETMD 
Sbjct: 61  KRTEHMNYLRLASRLDAVVARLDTQAKMQVIGKSMANIVKSLDSALATGNLQKMSETMDN 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FE+QFVNMEVQAEFME AMAGSTSLSTPE EVNSLMQQVADDYGLEVSVGLPQ A HA+P
Sbjct: 121 FERQFVNMEVQAEFMEGAMAGSTSLSTPETEVNSLMQQVADDYGLEVSVGLPQAAAHAIP 180

Query: 181 -ARETEK-IDEDDLSRRLAELKARG 204
            A+E EK +DEDDLSRRLAELKARG
Sbjct: 181 AAKEKEKAVDEDDLSRRLAELKARG 205

BLAST of CcUC07G141300 vs. ExPASy Swiss-Prot
Match: Q5E994 (Charged multivesicular body protein 1b OS=Bos taurus OX=9913 GN=CHMP1B PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 96/200 (48.00%), Postives = 147/200 (73.50%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           M N EK    +  LKF AK L R A+KC+KEEK+EK KIKKA++KGNM+ ARI+AENAIR
Sbjct: 1   MSNMEK---HLFNLKFAAKELGRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           ++ + +N+LR+++R+DAV AR+ T   M  + KSM  +VKS+++TL T NL+K+S  MD+
Sbjct: 61  QKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDK 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FE QF  ++VQ + ME+ M+ +T+L+TP+G+V+ L+Q++AD+ GL++++ LPQ    +V 
Sbjct: 121 FEHQFETLDVQTQQMEDTMSSTTTLTTPQGQVDMLLQEMADEAGLDLNMELPQGQTGSV- 180

Query: 181 ARETEKIDEDDLSRRLAELK 201
                  ++D+LS+RLA L+
Sbjct: 181 GTSVASAEQDELSQRLARLR 196

BLAST of CcUC07G141300 vs. ExPASy Swiss-Prot
Match: O96552 (Charged multivesicular body protein 1 OS=Dictyostelium discoideum OX=44689 GN=chmp1 PE=3 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.2e-43
Identity = 90/194 (46.39%), Postives = 150/194 (77.32%), Query Frame = 0

Query: 9   NQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNY 68
           NQ+ +LKFT+K L++Q++K E+ EK++K+K+KKA+E+GNMDGARIYA+NAIR++ + +NY
Sbjct: 3   NQLFQLKFTSKQLEKQSKKSEQSEKAQKIKLKKAIEQGNMDGARIYAQNAIREKNQSLNY 62

Query: 69  LRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQFEKQFVNM 128
           LRLASR+DAV +R++T  +M ++  SM +IVKS+E ++   +L+K+++ MDQFE+QF ++
Sbjct: 63  LRLASRIDAVASRVETAIRMKSVTGSMANIVKSMEKSMRNMDLEKITQVMDQFERQFEDL 122

Query: 129 EVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVPARETEKID 188
           +VQ+ ++ENAM  +T+LSTP  +V+ L+ QVAD++GL V + +      + P+ + ++ +
Sbjct: 123 DVQSVYVENAMNQTTTLSTPADQVDLLISQVADEHGLNVGMQM-----GSAPSEKVQQGE 182

Query: 189 EDDLSRRLAELKAR 203
            D+L+ RL  LK +
Sbjct: 183 TDELTERLNRLKQK 191

BLAST of CcUC07G141300 vs. ExPASy TrEMBL
Match: A0A5A7V1A1 (ESCRT-related protein CHMP1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold348G00240 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.8e-99
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTEQMNYLRL+SRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HAVP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
           ARETEKIDEDDLSRRLAELKARG
Sbjct: 181 ARETEKIDEDDLSRRLAELKARG 203

BLAST of CcUC07G141300 vs. ExPASy TrEMBL
Match: A0A0A0LIG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G849970 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.8e-99
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTEQMNYLRL+SRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HAVP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
           ARETEKIDEDDLSRRLAELKARG
Sbjct: 181 ARETEKIDEDDLSRRLAELKARG 203

BLAST of CcUC07G141300 vs. ExPASy TrEMBL
Match: A0A1S3BIE8 (ESCRT-related protein CHMP1B-like OS=Cucumis melo OX=3656 GN=LOC103490004 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.8e-99
Identity = 201/203 (99.01%), Postives = 202/203 (99.51%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTEQMNYLRL+SRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPA HAVP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
           ARETEKIDEDDLSRRLAELKARG
Sbjct: 181 ARETEKIDEDDLSRRLAELKARG 203

BLAST of CcUC07G141300 vs. ExPASy TrEMBL
Match: A0A6J1KC50 (ESCRT-related protein CHMP1B-like OS=Cucurbita maxima OX=3661 GN=LOC111492980 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.7e-99
Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTEQMNYLRLASRLDAVVARLDTQAKMSTINK+MGSIVKSLESTLATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKAMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
            RETEKIDEDDL+RRLAELKARG
Sbjct: 181 TRETEKIDEDDLTRRLAELKARG 203

BLAST of CcUC07G141300 vs. ExPASy TrEMBL
Match: A0A6J1GD16 (ESCRT-related protein CHMP1B-like OS=Cucurbita moschata OX=3662 GN=LOC111452864 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.7e-99
Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR
Sbjct: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KRTEQMNYLRLASRLDAVVARLDTQAKMSTINK+MGSIVKSLESTLATGNLQKMSETMDQ
Sbjct: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKAMGSIVKSLESTLATGNLQKMSETMDQ 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
            RETEKIDEDDL+RRLAELKARG
Sbjct: 181 TRETEKIDEDDLTRRLAELKARG 203

BLAST of CcUC07G141300 vs. TAIR 10
Match: AT1G73030.1 (SNF7 family protein )

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-94
Identity = 181/203 (89.16%), Postives = 196/203 (96.55%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNT+KL+NQI +LKFT+KSLQRQ+RKCEKEEK+EKLK+KKA+EKGNMDGARIYAENAIR
Sbjct: 1   MGNTDKLMNQIFDLKFTSKSLQRQSRKCEKEEKAEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KR+EQMNYLRLASRLDAVVARLDTQAKM+TI KSM +IVKSLES+LATGNLQKMSETMD 
Sbjct: 61  KRSEQMNYLRLASRLDAVVARLDTQAKMTTITKSMTNIVKSLESSLATGNLQKMSETMDS 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHA+P
Sbjct: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
            +  EK+DEDDLSRRLAELKARG
Sbjct: 181 TKTEEKVDEDDLSRRLAELKARG 203

BLAST of CcUC07G141300 vs. TAIR 10
Match: AT1G17730.1 (vacuolar protein sorting 46.1 )

HSP 1 Score: 339.3 bits (869), Expect = 2.3e-93
Identity = 178/203 (87.68%), Postives = 195/203 (96.06%), Query Frame = 0

Query: 1   MGNTEKLLNQIMELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIR 60
           MGNT+KL+NQI ELKFT+KSLQRQARKCEKEE+SEKLK+KKA+EKGNMDGARIYAENAIR
Sbjct: 1   MGNTDKLMNQIFELKFTSKSLQRQARKCEKEERSEKLKVKKAIEKGNMDGARIYAENAIR 60

Query: 61  KRTEQMNYLRLASRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQ 120
           KR+EQMNYLRL+SRLDAVVARLDTQAKM+TI KSM +IVKSLES+L TGNLQKMSETMD 
Sbjct: 61  KRSEQMNYLRLSSRLDAVVARLDTQAKMATITKSMTNIVKSLESSLTTGNLQKMSETMDS 120

Query: 121 FEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAVP 180
           FEKQFVNMEVQAEFM+NAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHA+P
Sbjct: 121 FEKQFVNMEVQAEFMDNAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAGHAIP 180

Query: 181 ARETEKIDEDDLSRRLAELKARG 204
            +  EK++EDDL+RRLAELKARG
Sbjct: 181 TKTEEKVEEDDLTRRLAELKARG 203

BLAST of CcUC07G141300 vs. TAIR 10
Match: AT2G06530.1 (SNF7 family protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 45/174 (25.86%), Postives = 90/174 (51.72%), Query Frame = 0

Query: 19  KSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYLRLASRLDAV 78
           + ++R+ +  + +EK    +IKK  ++G M   ++ A++ IR R +   + +L S+L  V
Sbjct: 28  REIERERQGLQTQEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGV 87

Query: 79  VARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQFEKQFVNMEVQAEFMENA 138
             R+ T      + ++M  + K++       NL  + + M +FE+Q   ME+ +E M +A
Sbjct: 88  SLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDA 147

Query: 139 MAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ-PAGH-AVPARETEKIDED 191
           +  +      E E   L+ QV D+ G++++  L   P+G  AVPA + + +  +
Sbjct: 148 IDDALEGDEEEEETEDLVSQVLDEIGIDINQELVNAPSGAVAVPAAKNKVVQAE 201

BLAST of CcUC07G141300 vs. TAIR 10
Match: AT5G44560.1 (SNF7 family protein )

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06
Identity = 45/201 (22.39%), Postives = 83/201 (41.29%), Query Frame = 0

Query: 13  ELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYLRLA 72
           E+    + ++R+    + EEK    +IKK  + GN    +I A   +R R +  N     
Sbjct: 20  EMAVATRGIEREITSLQLEEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSR 79

Query: 73  SRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQKMSETMDQFEKQFVNMEVQA 132
           +++  V          ++I+  M    K++ +        K ++ +  F+KQ   +++  
Sbjct: 80  AQIRGVTTHTQALYASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTI 139

Query: 133 EFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ-------------PAGHAV 192
           E M  A+  +      E E   L  QV D+ G+ V+  L               PA  A 
Sbjct: 140 EMMSEAIDETLDKDEAEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAA 199

Query: 193 PARETEKIDEDDLSRRLAELK 201
             + +E  + D+L +RLA L+
Sbjct: 200 TNKNSESSEVDELEKRLASLR 220

BLAST of CcUC07G141300 vs. TAIR 10
Match: AT5G22950.1 (SNF7 family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-05
Identity = 50/203 (24.63%), Postives = 93/203 (45.81%), Query Frame = 0

Query: 13  ELKFTAKSLQRQARKCEKEEKSEKLKIKKAMEKGNMDGARIYAENAIRKRTEQMNYLRLA 72
           +L+   ++++RQ R  +KEE++ +  IK+A ++ +M  A+  A+  +  R          
Sbjct: 24  KLRQECRNIERQIRDIQKEERNVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENK 83

Query: 73  SRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGNLQK---MSETMDQFEKQFVNME 132
           ++++++   L    +   I +++G + KS E      NL K   M+ TM +F K+     
Sbjct: 84  AQMNSISMHL---GESVAIARTVGHLSKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAG 143

Query: 133 VQAEFMENAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLP---------QPAGHAVP 192
           V  EF+  A+  +      E E++  + +V      E +  LP          PA  A  
Sbjct: 144 VIEEFVNEAIDNALDSEDMEEEIDEEVDKVLTAIAGETAAELPVAVRKERIKVPAQKAST 203

Query: 193 ARETEKIDED-DLSRRLAELKAR 203
           +RE E + E  D    L E++AR
Sbjct: 204 SREEEAVAEGVDDEEELEEIRAR 223

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8651298.19.0e-10098.07hypothetical protein Csa_002473 [Cucumis sativus][more]
XP_004146833.15.8e-9999.01ESCRT-related protein CHMP1B [Cucumis sativus] >XP_008447589.1 PREDICTED: ESCRT-... [more]
XP_022949550.17.6e-9998.52ESCRT-related protein CHMP1B-like [Cucurbita moschata] >XP_022998305.1 ESCRT-rel... [more]
XP_022148096.11.7e-9898.52ESCRT-related protein CHMP1B-like isoform X1 [Momordica charantia][more]
XP_038878614.11.7e-9898.52ESCRT-related protein CHMP1B-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q9SSM41.7e-9389.16ESCRT-related protein CHMP1B OS=Arabidopsis thaliana OX=3702 GN=CHMP1B PE=1 SV=1[more]
Q8LE583.2e-9287.68ESCRT-related protein CHMP1A OS=Arabidopsis thaliana OX=3702 GN=CHMP1A PE=1 SV=1[more]
Q84VG14.5e-8685.37ESCRT-related protein CHMP1 OS=Oryza sativa subsp. japonica OX=39947 GN=CHMP1 PE... [more]
Q5E9941.2e-4348.00Charged multivesicular body protein 1b OS=Bos taurus OX=9913 GN=CHMP1B PE=2 SV=1[more]
O965521.2e-4346.39Charged multivesicular body protein 1 OS=Dictyostelium discoideum OX=44689 GN=ch... [more]
Match NameE-valueIdentityDescription
A0A5A7V1A12.8e-9999.01ESCRT-related protein CHMP1B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A0A0LIG82.8e-9999.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G849970 PE=4 SV=1[more]
A0A1S3BIE82.8e-9999.01ESCRT-related protein CHMP1B-like OS=Cucumis melo OX=3656 GN=LOC103490004 PE=4 S... [more]
A0A6J1KC503.7e-9998.52ESCRT-related protein CHMP1B-like OS=Cucurbita maxima OX=3661 GN=LOC111492980 PE... [more]
A0A6J1GD163.7e-9998.52ESCRT-related protein CHMP1B-like OS=Cucurbita moschata OX=3662 GN=LOC111452864 ... [more]
Match NameE-valueIdentityDescription
AT1G73030.11.2e-9489.16SNF7 family protein [more]
AT1G17730.12.3e-9387.68vacuolar protein sorting 46.1 [more]
AT2G06530.11.2e-0925.86SNF7 family protein [more]
AT5G44560.14.7e-0622.39SNF7 family protein [more]
AT5G22950.11.8e-0524.63SNF7 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..138
NoneNo IPR availableCOILSCoilCoilcoord: 4..45
NoneNo IPR availableCOILSCoilCoilcoord: 182..202
NoneNo IPR availableGENE3D6.10.140.1230coord: 3..173
e-value: 4.0E-39
score: 136.3
NoneNo IPR availablePANTHERPTHR10476:SF57ESCRT-RELATED PROTEIN CHMP1A-RELATEDcoord: 5..203
NoneNo IPR availablePANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 5..203
IPR005024Snf7 familyPFAMPF03357Snf7coord: 11..172
e-value: 1.3E-11
score: 44.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC07G141300.1CcUC07G141300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032509 endosome transport via multivesicular body sorting pathway
biological_process GO:0045324 late endosome to vacuole transport
biological_process GO:0015031 protein transport
biological_process GO:0007034 vacuolar transport
cellular_component GO:0000815 ESCRT III complex
cellular_component GO:0005771 multivesicular body