CcUC07G140580 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G140580
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr07: 26797104 .. 26801137 (-)
RNA-Seq Expression	CcUC07G140580
Synteny	CcUC07G140580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTAGTTTTCATTTAGTTTCTAAATTTTATAATATTACGTTGAGGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGGTTTAGGTTCGGCCTCAATGGGAAAATAAAACGGAGCACCTAACATCGTATCTTCACAGACCAAGAACTACGAGATCGCCCCTTTCATTCTGGGGTGACGGAGGGATCGTACCATTCGAGCCTTTTTTTTTCATGCTTTTCCCGGAGGTCTGGAGAAAGCTGCAATCAATAGGATTTTCTTAATCCTCCCTTCCCGAAAGCGAAAGGAAGAACGTGAAATTCTTTTTCCTTTCTTCCGCAGGGACCAGGAGATTTGAAAAAGGATCTTAGAGTGTCTAGGGTTGGGCCAGGAGGGTTTCAAAATTACGTTTTACTTTTAAATTTTGAGGTCTTTTTTCTCCACTTAGAACTCAAAAGTTTCAAAATTTACAATTTTAGCATTTATTTATTTTTTTAAAAATCTTACATTCAATCTTTGATGTCTATAATGTCAATTAATTAATTTAGAAGAAGCATATAGTTATACTTATATTAATTTCCACTCATTTTTCTTTTATCATGTCTTAATTATTTAAAATTAGTTATCTAAAAGTTAATGACAAATACCAATGTAAGCATTAGTAAAATTAAAGTCCGGAGAAAAAGTATAAAATTTTGAAATCGAGGAACTAATTAACCATGAAATTTAAAATTTAAGGATAAAAATGTAACACATAATGCCGTCTTTGGACCAAATAGAAGTTCAACTAAAAAATTTAGAGATAAAAATATAAAAATTAAAAATTTGAAGATGAAATAGAAATTAGACTCAATCCCTAAGAACCAAAATTCATATTTTTCACAAAAAGTAATTAATTGTGAACTATTTTATTCTCGTAAAATTGTTTCTAGATATTTTCGAGGGGAATAGATATTCAATACCTCTTTGTGGGTGATCTCTGCTGGGTAATACATAGGTCAAATGGGCAATGCCCTTCCAGAGTCTATCCTATGTCCATTTTTCCCACTAACGAAGGGAAGGAGTGGGGAAACATTTCCTTATAAGCTAATTAATAGCGACATGGATGAGGTGGGAAACGTCCCTATCTCCGCCCAGCTTTTTTATTTATCATAATAATTCAATGTTATGTTGTTATTACTATATCTCGAGAATCTCAACATACGTTACACTCTCAATAATAAGATATATGAGTTATTCTATTTATTGTTAATTGGCTATTCGGTGCAATAAAAAGAATTTGAGATCTGATTAAGAATGGTGAACTCAAAAGAGGCACCATCTTGAATAGGCATGTTGAGAATCCTAAGAGACTTCACACTTTTAATAAGATAGATGAATTACTTCATTCATTGTCAATTGGTTTAGAGATGGAACCTCGTACTATCAAATAATGATCATGTTTGAATTGAACATTTAAATTTAGATTCTATATATGAATAAAATTTGATTGATTATTATTTTCTTTTAGTAAAAAATTGGAAGAATGTGCAAATTGTCCATACAGAATTATTTTCTTTGAGTAGAAGCGCAAGTTCTTTGTCTACACTATCCTATGTACACAAAAGTATTAATACGATGGACATACTACAAAGGAGATTGCCTGACATCGGTCTAAATTCAAATTGGTGCTCTCTCTTTTAACAAGCAAAGGAAATCATAGACCATCTCTTTATTGGTTATTTGTTGGTCTCTCTAGCTAGAAAGAAACAATTGCACCTTCAACAATGCTACTGACAGTGTCACCAAAATTTGGAAAAATATTTGGTCTTTGACCGGCAGTTGGTCACATCAATATAAACTCTTTACAAATTATAGTCTAACAACTATTTCCCCTTTAACTTAGCTACTTTTATGTGTAATTTACCTATATCTTCTTCATCTTCATTTAGCCCTCCTAAATTTTTGCTTGTATTTGCTTTTTGTGATCTTCCTATAATTTCTCTCGATTGATTATTAGTGAATTTGGAGTGATATATAATGAGGGTGCTAGGAATGTGTCAATCTAGTTAAGATATTCAGATATATATATATACTAACTCACACTACCTATTATGTCTTTCTCTAATAATAATAATTTATAAGCCAAAGTGACCAGTTTTCCGGGGGATTATTGAGATACTGTCTTGCTCTAGTGGCCATGAATTTGTTGTAATTCATCTGATTCATTTCTTCAAGCGAGAGATTTAAATCATGAATCACCATTAGGAAAAAGAAAAAGGAAAAAAAAAAAAAAAAGAAAAGAAAAAGAGAGAAAATTTTACAAGCTCTCTTGAAATCCACTTAAAATACCATTTCCCAGCTAGCTATAAATACCACCTCCCAAAAAAGTAACTTCAATTTGTGACATTTGTAATTTTCTCTCTTTCTTTTTCTTTCAAGGTTCTACTTATGAATATATGAAAATGGTATAAATGGGTGAATATGTTGATGTTGATGAGAAATTATGGGGAACATGAGCCAACCCTTGAACCTTCATCACTATCAATGTTTTCATGGCTTGATCCTGCTTTTGATCAAAAGCGTATGTAATAGTATTAGATTAAGTTACAAATTTAGTTATTGTATTTTTACATTTCTATTTAATATAATATACAAGGAATGAGGAATAGTGTTCCTAATAGGTTTCTAAAACTTTCAATTTTATACCTAATAAATTTCTAGTATATTCAAAAATTTTTAAAGGAAAACAAAACATATTTAGTAGATACATAAAATAAATTTTTTTACACAATAGGACCGTGTATTTTGAAATAAATCCAAAGAACCTTTATAATTTATAAAACTGATAGTTTAATGACTTATTAGACATATTTTTTAGGTTAAAAAACACTATTGGTCCCTAAACTTCTCTAAAAGTAACAATTTAGTTCATGAACTTTGATTTGTAACAATTTAGTACATGTACTTTCAGTTTTATGACAATTTAGTTCCTAAACTTTAGTATTTAACAATTTAGTTTTTGTGTTTTCAAATTTGTAATAATTTAGTCCTTAACAAAAAAATTATCAAAATTAAATGTTAATTTTTATTATTTTAATGATGTAAACTTTATATTTTATAAAAATATTGAGTCTCTAATTAGTTTATCTATTTATTTATGCAATAAATCTCATTAAACCTTTAACACTAATTTATACAATAAGGACTAAATCGTTACAAATTTTAAAGTATTAGGGCTAATTTTTTACATAGTAATATTTAAGGACTAAATTGTTACAAAATTAAAATTACAGGGACTAAATTATTACAAACTAAAGTTGAAAGATTAAATTGTTACTTTTATAATAGTTTTGGGACTAGAAGTGATTTTTTTACCTATTTTGGAAGGTTAAAGAATATATTATACACAAACTTAAACAATTAAAGGTTCGAATTACCTGGACGTTCCCTATAAAAGTTATAACCACTTCGACAATGGCATGCTATAGTGCAAGCAACTCCTGCCTGTAAATAATAAAAACAAAATTCAATTTAATTATTTATAAGATCATATTATGGTTTAATTTCACAAGAAGAAGAATAATGCATTGAAAGTGAACCTGAAAGCATGGACAATATCCTCTTTGACACTGGATAATGCAATTGCATCCTCTTCTTTCTGAAGAGGAAGTTATTGTTTTCTTATTCTCTTTTACCTGCAATATAAATCAATATTTATAAATATTAAAAAAAATATATATATATATATATATATTTAATACGAACTAAAAAGAACTACAAATTATTAAACCTTTTTTGGAGCAAAAGCTGAGGGATTTTTGGATAGAATTTGTTGTTTTGCAGCCTCAACTATGTCTTCATACAAAGGTTTGTTGAAGCAATCTATACAGCTACAATGATCTTTGCTGCAATACACACCACTTGCAAAGCATTCGCAATATCTGCATGA

mRNA sequence

ATGGATTTAGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGCCTCAACTATGTCTTCATACAAAGGTTTGTTGAAGCAATCTATACAGCTACAATGATCTTTGCTGCAATACACACCACTTGCAAAGCATTCGCAATATCTGCATGA

Coding sequence (CDS)

ATGGATTTAGATAGATGGGGCGATTCAGGTGAGATCCAATGTAGATCCAACTTTCTATTCACTCGTGGGATCCGGGCGGTCCGGGGGGGACCACCTCGGCTCCTCTCTTCTCGAGAATCCATACATCCCTTATCAGTATATGGACAGCTATCTCTCGAGCACAGCCTCAACTATGTCTTCATACAAAGGTTTGTTGAAGCAATCTATACAGCTACAATGATCTTTGCTGCAATACACACCACTTGCAAAGCATTCGCAATATCTGCATGA

Protein sequence

MDLDRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNYVFIQRFVEAIYTATMIFAAIHTTCKAFAISA

Homology

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BLAST of CcUC07G140580 vs. NCBI nr
Match: THU42596.1 (hypothetical protein C4D60_Mb00t15430 [Musa balbisiana])

HSP 1 Score: 111.3 bits (277), Expect = 4.3e-21
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 4  DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNY 59
          DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEH   +
Sbjct: 33 DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRF 87

[Close]

BLAST of CcUC07G140580 vs. NCBI nr
Match: THU42410.1 (hypothetical protein C4D60_Mb00t17760 [Musa balbisiana] >THU42627.1 hypothetical protein C4D60_Mb00t11480 [Musa balbisiana] >THU43721.1 hypothetical protein C4D60_Mb00t12340 [Musa balbisiana] >THU43747.1 hypothetical protein C4D60_Mb00t06100 [Musa balbisiana])

HSP 1 Score: 111.3 bits (277), Expect = 4.3e-21
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 4  DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNY 59
          DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEH   +
Sbjct: 33 DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRF 87

[Close]

BLAST of CcUC07G140580 vs. NCBI nr
Match: CAG1865826.1 (unnamed protein product [Musa acuminata subsp. malaccensis])

HSP 1 Score: 111.3 bits (277), Expect = 4.3e-21
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 4  DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNY 59
          DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEH   +
Sbjct: 10 DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRF 64

[Close]

BLAST of CcUC07G140580 vs. NCBI nr
Match: QYL70603.1 (hypothetical chloroplast RF68 [Colocasia esculenta] >QYL70626.1 hypothetical chloroplast RF68 [Colocasia esculenta] >QYL70689.1 hypothetical chloroplast RF68 [Colocasia esculenta] >QYL70712.1 hypothetical chloroplast RF68 [Colocasia esculenta])

HSP 1 Score: 111.3 bits (277), Expect = 4.3e-21
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 4  DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNY 59
          DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEH   +
Sbjct: 9  DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRF 63

[Close]

BLAST of CcUC07G140580 vs. NCBI nr
Match: KAF7021297.1 (hypothetical protein CFC21_034270, partial [Triticum aestivum])

HSP 1 Score: 110.9 bits (276), Expect = 5.6e-21
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 4  DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNYV 60
          DRWGDSGEI CRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYG+LSLEH L +V
Sbjct: 20 DRWGDSGEIPCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGELSLEHRLRFV 75

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BLAST of CcUC07G140580 vs. ExPASy Swiss-Prot
Match: Q6L3C9 (Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-09
Identity = 34/54 (62.96%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 10 GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNYV 60
          G IQ RS+    F    G     GGPPRLLSSRESIHPLSVYG+LSLEH L +V
Sbjct: 23 GAIQVRSHVDRTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFV 76

[Close]

BLAST of CcUC07G140580 vs. ExPASy Swiss-Prot
Match: Q6ENQ5 (Uncharacterized protein ycf68 OS=Saccharum officinarum OX=4547 GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.9e-09
Identity = 34/54 (62.96%), Postives = 37/54 (68.52%), Query Frame = 0


Query: 10 GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNYV 60
          G IQ RS+    F    G     GGPPRLLSSRESIHPLSVYG+LSLEH L +V
Sbjct: 23 GAIQVRSHVDRTFYSLVGSGRSGGGPPRLLSSRESIHPLSVYGELSLEHRLRFV 76

[Close]

BLAST of CcUC07G140580 vs. ExPASy Swiss-Prot
Match: P03938 (Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 2.5e-08
Identity = 33/54 (61.11%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 10 GEIQCRSN----FLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNYV 60
          G IQ RS+    F    G     GGPP LLSSRESIHPLSVYG+LSLEH L +V
Sbjct: 23 GAIQVRSHVDRTFYSLVGSGRSGGGPPGLLSSRESIHPLSVYGELSLEHRLRFV 76

[Close]

BLAST of CcUC07G140580 vs. ExPASy TrEMBL
Match: A0A4S8I423 (Uncharacterized protein ycf68 OS=Musa balbisiana OX=52838 GN=C4D60_Mb00t06100 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.1e-21
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 4  DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNY 59
          DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEH   +
Sbjct: 33 DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRF 87

[Close]

BLAST of CcUC07G140580 vs. ExPASy TrEMBL
Match: A0A4V6T3W7 (Uncharacterized protein ycf68 OS=Musa balbisiana OX=52838 GN=C4D60_Mb00t15430 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.1e-21
Identity = 51/55 (92.73%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 4  DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNY 59
          DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEH   +
Sbjct: 33 DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHRFRF 87

[Close]

BLAST of CcUC07G140580 vs. ExPASy TrEMBL
Match: A0A2G2YF24 (Uncharacterized protein ycf68 OS=Capsicum annuum OX=4072 GN=T459_27840 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.6e-21
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0


Query: 4   DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHS 56
           DRWGDSGEIQCRSNF FTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHS
Sbjct: 187 DRWGDSGEIQCRSNFRFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHS 238

[Close]

BLAST of CcUC07G140580 vs. ExPASy TrEMBL
Match: A0A5J6CEE9 (Uncharacterized protein ycf68 OS=Eriocaulon decemflorum OX=2594721 GN=ycf68 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 6.1e-21
Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 0


Query: 4  DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHSLNY 59
          DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRE IHPLS+YGQLSLEH L +
Sbjct: 19 DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSREPIHPLSMYGQLSLEHRLRF 73

[Close]

BLAST of CcUC07G140580 vs. ExPASy TrEMBL
Match: A0A6N2M157 (Uncharacterized protein ycf68 OS=Salix viminalis OX=40686 GN=SVIM_LOCUS304396 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 7.9e-21
Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = 0


Query: 4   DRWGDSGEIQCRSNFLFTRGIRAVRGGPPRLLSSRESIHPLSVYGQLSLEHS 56
           DRWGDSGEIQCRSNFLFTRGIRAVRGGPP LLSSRESIHPLSVYGQLSLEHS
Sbjct: 288 DRWGDSGEIQCRSNFLFTRGIRAVRGGPPWLLSSRESIHPLSVYGQLSLEHS 339

The following BLAST results are available for this feature:

BLAST of CcUC07G140580 vs. NCBI nr


Match Name	E-value	Identity	Description
THU42596.1	4.3e-21	92.73	hypothetical protein C4D60_Mb00t15430 [Musa balbisiana]	[more]
THU42410.1	4.3e-21	92.73	hypothetical protein C4D60_Mb00t17760 [Musa balbisiana] >THU42627.1 hypothetical...	[more]
CAG1865826.1	4.3e-21	92.73	unnamed protein product [Musa acuminata subsp. malaccensis]	[more]
QYL70603.1	4.3e-21	92.73	hypothetical chloroplast RF68 [Colocasia esculenta] >QYL70626.1 hypothetical chl...	[more]
KAF7021297.1	5.6e-21	91.07	hypothetical protein CFC21_034270, partial [Triticum aestivum]	[more]

BLAST of CcUC07G140580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6L3C9	3.9e-09	62.96	Uncharacterized protein ycf68 OS=Saccharum hybrid OX=15819 GN=ycf68-1 PE=3 SV=1	[more]
Q6ENQ5	3.9e-09	62.96	Uncharacterized protein ycf68 OS=Saccharum officinarum OX=4547 GN=ycf68-1 PE=3 S...	[more]
P03938	2.5e-08	61.11	Uncharacterized protein ycf68 OS=Zea mays OX=4577 GN=ycf68 PE=3 SV=2	[more]

BLAST of CcUC07G140580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4S8I423	2.1e-21	92.73	Uncharacterized protein ycf68 OS=Musa balbisiana OX=52838 GN=C4D60_Mb00t06100 PE...	[more]
A0A4V6T3W7	2.1e-21	92.73	Uncharacterized protein ycf68 OS=Musa balbisiana OX=52838 GN=C4D60_Mb00t15430 PE...	[more]
A0A2G2YF24	4.6e-21	98.08	Uncharacterized protein ycf68 OS=Capsicum annuum OX=4072 GN=T459_27840 PE=3 SV=1	[more]
A0A5J6CEE9	6.1e-21	90.91	Uncharacterized protein ycf68 OS=Eriocaulon decemflorum OX=2594721 GN=ycf68 PE=3...	[more]
A0A6N2M157	7.9e-21	98.08	Uncharacterized protein ycf68 OS=Salix viminalis OX=40686 GN=SVIM_LOCUS304396 PE...	[more]

BLAST of CcUC07G140580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022546	Uncharacterised protein family Ycf68	PFAM	PF10839	DUF2647	coord: 24..54 e-value: 3.1E-8 score: 33.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G140580.1	CcUC07G140580.1	mRNA