CcUC07G137930 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G137930
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr07: 23562516 .. 23563374 (-)
RNA-Seq Expression	CcUC07G137930
Synteny	CcUC07G137930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCGCTCACGATACCTTCGTCTTCGCCGAGAAGTTTCTCTTTTCCGTCGTCTCTCCGATGCCAGTCTCCGCCGATTCTTCTTCTTCTTCCTCCCGCTCCTCTTCATTTCCAGAATGCGCCACTCCGACGAGTCCGAGCGTTCAACTCGTTTCTAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTCGATGCCTCAAAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGACGAGTGTTTCTGGATTCTCCGGCCGATGTTTGCTCCGGTTACGAGGTTCTCTCGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGTTTCACAGTAAGTTCTCTCTCATCATCGCATTGTGATTTACGCAGTGATTGCTTTGTTTCGTTTTCTTGTTTTCGAAATAGATTCGGTGTAATGTGAAATAATCTGAAGTAGATATAGGACATTTTGAGAAATCGTGAAGAAATTGCATTCTACGCTTGAGAAATCGAAGAGAAAATGAAAGGGAAAGATAAAATTAGAATCATAAACATGATTTTCCTTTTCAGTCTACAGATATGAACCCTAAAAATGTATGAAGTGAATTATATATATCCGTTGTGTTGACTTCAGGAGAAACGGAAATTATCTTGTCATTGATTGTTGGATTCATTCTAATTGGAAATTTAATTTATGGTGTTCATTGCAGGGATTTTGGTGTTCTTGGAAAAATTGATTCCACCTTACAACTTTTATAATCCCCGATTCAAAATGATTCAGGAAGAGAAATTAGGTTGTTCCTTTGAGTATTCTGTTAATTGTATTCCATTGAAGAAAGAAAAAGAAGAAATT

mRNA sequence

GCGCGCTCACGATACCTTCGTCTTCGCCGAGAAGTTTCTCTTTTCCGTCGTCTCTCCGATGCCAGTCTCCGCCGATTCTTCTTCTTCTTCCTCCCGCTCCTCTTCATTTCCAGAATGCGCCACTCCGACGAGTCCGAGCGTTCAACTCGTTTCTAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTCGATGCCTCAAAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGACGAGTGTTTCTGGATTCTCCGGCCGATGTTTGCTCCGGTTACGAGGTTCTCTCGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGGATTTTGGTGTTCTTGGAAAAATTGATTCCACCTTACAACTTTTATAATCCCCGATTCAAAATGATTCAGGAAGAGAAATTAGGTTGTTCCTTTGAGTATTCTGTTAATTGTATTCCATTGAAGAAAGAAAAAGAAGAAATT

Coding sequence (CDS)

ATGCCAGTCTCCGCCGATTCTTCTTCTTCTTCCTCCCGCTCCTCTTCATTTCCAGAATGCGCCACTCCGACGAGTCCGAGCGTTCAACTCGTTTCTAAATCGGTGTCGGATCGGCTTCTCGGCAAGTTCTTCGATGCCTCAAAATTCGACTTCGATTACGAACAGAGTAGCTTGTGGTCTCCGCCGATTCCGCGACGAGTGTTTCTGGATTCTCCGGCCGATGTTTGCTCCGGTTACGAGGTTCTCTCGAAGCTTGACAATGCGAAGAAGGCATGGAGGAAATTCATTATCTGGATTTTGGTGTTCTTGGAAAAATTGATTCCACCTTACAACTTTTATAATCCCCGATTCAAAATGATTCAGGAAGAGAAATTAGGTTGTTCCTTTGAGTATTCTGTTAATTGTATTCCATTGAAGAAAGAAAAAGAAGAAATT

Protein sequence

MPVSADSSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFIIWILVFLEKLIPPYNFYNPRFKMIQEEKLGCSFEYSVNCIPLKKEKEEI

Homology

[Close]

BLAST of CcUC07G137930 vs. NCBI nr
Match: XP_038876217.1 (uncharacterized protein LOC120068490 isoform X2 [Benincasa hispida])

HSP 1 Score: 172.2 bits (435), Expect = 3.3e-39
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MPVSADSSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
          MP+SADSSSSSS S+SF ECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS
Sbjct: 1  MPISADSSSSSSCSASFLECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60

Query: 61 PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFII 98
          PPI R+VFLDSPADVCSGY VLSKLD A+KAWRKFII
Sbjct: 61 PPIQRKVFLDSPADVCSGYVVLSKLDYARKAWRKFII 97

[Close]

BLAST of CcUC07G137930 vs. NCBI nr
Match: XP_038876207.1 (uncharacterized protein LOC120068490 isoform X1 [Benincasa hispida])

HSP 1 Score: 172.2 bits (435), Expect = 3.3e-39
Identity = 88/97 (90.72%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MPVSADSSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
          MP+SADSSSSSS S+SF ECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS
Sbjct: 1  MPISADSSSSSSCSASFLECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60

Query: 61 PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFII 98
          PPI R+VFLDSPADVCSGY VLSKLD A+KAWRKFII
Sbjct: 61 PPIQRKVFLDSPADVCSGYVVLSKLDYARKAWRKFII 97

[Close]

BLAST of CcUC07G137930 vs. NCBI nr
Match: XP_022142869.1 (uncharacterized protein LOC111012878 [Momordica charantia])

HSP 1 Score: 172.2 bits (435), Expect = 3.3e-39
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MPVSADSSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
          MP+SA SSSSSS SSSF EC +PTSPSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWS
Sbjct: 1  MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61 PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFII 98
          PPIPRRVFLDSPA+VCSGYEV SKLD+AKKAWRKF+I
Sbjct: 61 PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVI 97

[Close]

BLAST of CcUC07G137930 vs. NCBI nr
Match: XP_022984340.1 (uncharacterized protein LOC111482673 isoform X1 [Cucurbita maxima])

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-36
Identity = 84/96 (87.50%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MPVSADSSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
          MP SADSSSSSS SSSF +CATP S SVQLVSKS SDRLL KFFDASKF+FDYEQSSLWS
Sbjct: 1  MPTSADSSSSSSSSSSFLDCATPRSLSVQLVSKSASDRLLDKFFDASKFNFDYEQSSLWS 60

Query: 61 PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFI 97
          PPIPRRVFLDSP DVCSGYEVLSKL+N KKAWRKFI
Sbjct: 61 PPIPRRVFLDSPDDVCSGYEVLSKLENVKKAWRKFI 96

[Close]

BLAST of CcUC07G137930 vs. NCBI nr
Match: XP_022984341.1 (uncharacterized protein LOC111482673 isoform X2 [Cucurbita maxima])

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-36
Identity = 84/96 (87.50%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MPVSADSSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
          MP SADSSSSSS SSSF +CATP S SVQLVSKS SDRLL KFFDASKF+FDYEQSSLWS
Sbjct: 1  MPTSADSSSSSSSSSSFLDCATPRSLSVQLVSKSASDRLLDKFFDASKFNFDYEQSSLWS 60

Query: 61 PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFI 97
          PPIPRRVFLDSP DVCSGYEVLSKL+N KKAWRKFI
Sbjct: 61 PPIPRRVFLDSPDDVCSGYEVLSKLENVKKAWRKFI 96

[Close]

BLAST of CcUC07G137930 vs. ExPASy TrEMBL
Match: A0A6J1CMP9 (uncharacterized protein LOC111012878 OS=Momordica charantia OX=3673 GN=LOC111012878 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.6e-39
Identity = 86/97 (88.66%), Postives = 92/97 (94.85%), Query Frame = 0


Query: 1  MPVSADSSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
          MP+SA SSSSSS SSSF EC +PTSPSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWS
Sbjct: 1  MPISAASSSSSSSSSSFLECTSPTSPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61 PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFII 98
          PPIPRRVFLDSPA+VCSGYEV SKLD+AKKAWRKF+I
Sbjct: 61 PPIPRRVFLDSPAEVCSGYEVFSKLDSAKKAWRKFVI 97

[Close]

BLAST of CcUC07G137930 vs. ExPASy TrEMBL
Match: A0A6J1J8D3 (uncharacterized protein LOC111482673 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482673 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.8e-37
Identity = 84/96 (87.50%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MPVSADSSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
          MP SADSSSSSS SSSF +CATP S SVQLVSKS SDRLL KFFDASKF+FDYEQSSLWS
Sbjct: 1  MPTSADSSSSSSSSSSFLDCATPRSLSVQLVSKSASDRLLDKFFDASKFNFDYEQSSLWS 60

Query: 61 PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFI 97
          PPIPRRVFLDSP DVCSGYEVLSKL+N KKAWRKFI
Sbjct: 61 PPIPRRVFLDSPDDVCSGYEVLSKLENVKKAWRKFI 96

[Close]

BLAST of CcUC07G137930 vs. ExPASy TrEMBL
Match: A0A6J1J4Z5 (uncharacterized protein LOC111482673 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482673 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 5.8e-37
Identity = 84/96 (87.50%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 1  MPVSADSSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
          MP SADSSSSSS SSSF +CATP S SVQLVSKS SDRLL KFFDASKF+FDYEQSSLWS
Sbjct: 1  MPTSADSSSSSSSSSSFLDCATPRSLSVQLVSKSASDRLLDKFFDASKFNFDYEQSSLWS 60

Query: 61 PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFI 97
          PPIPRRVFLDSP DVCSGYEVLSKL+N KKAWRKFI
Sbjct: 61 PPIPRRVFLDSPDDVCSGYEVLSKLENVKKAWRKFI 96

[Close]

BLAST of CcUC07G137930 vs. ExPASy TrEMBL
Match: A0A6J1EYJ9 (uncharacterized protein LOC111437603 OS=Cucurbita moschata OX=3662 GN=LOC111437603 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 2.9e-36
Identity = 86/101 (85.15%), Postives = 88/101 (87.13%), Query Frame = 0


Query: 1   MPVSAD-----SSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQ 60
           MP SAD     SSSSSS SSSF +CATP S SVQLVSK  SDRLLGKFFDASKFDFDYEQ
Sbjct: 1   MPTSADSSSSSSSSSSSSSSSFLDCATPKSLSVQLVSKLASDRLLGKFFDASKFDFDYEQ 60

Query: 61  SSLWSPPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFI 97
           SSLWSPPIPRRVFLDSPADVCSGYEVLSKL+NAKKAWRK I
Sbjct: 61  SSLWSPPIPRRVFLDSPADVCSGYEVLSKLENAKKAWRKLI 101

[Close]

BLAST of CcUC07G137930 vs. ExPASy TrEMBL
Match: A0A6J1J7J0 (uncharacterized protein LOC111482071 OS=Cucurbita maxima OX=3661 GN=LOC111482071 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.4e-35
Identity = 81/97 (83.51%), Postives = 87/97 (89.69%), Query Frame = 0


Query: 1  MPVSADSSSSSSRSSSFPECATPTSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWS 60
          MP+S +SS+ S  SS F ECATPT PSVQLVSKSVSDRLLGKFFDAS+FDFDYEQSSLWS
Sbjct: 1  MPISTESSTPS--SSCFIECATPTIPSVQLVSKSVSDRLLGKFFDASQFDFDYEQSSLWS 60

Query: 61 PPIPRRVFLDSPADVCSGYEVLSKLDNAKKAWRKFII 98
          PPIPRRVFLDSP DVCSGYEVLSKL+ AK AWRKF+I
Sbjct: 61 PPIPRRVFLDSPLDVCSGYEVLSKLEKAKTAWRKFVI 95

[Close]

BLAST of CcUC07G137930 vs. TAIR 10
Match: AT4G15140.1 (unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 9.8e-05
Identity = 26/57 (45.61%), Postives = 32/57 (56.14%), Query Frame = 0


Query: 24 TSPSVQLVSKSVSDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVF----LDSPADVC 77
          T+  V+ +   +   LL KF D S F FDY QSSLWSP +PR       LDS + VC
Sbjct: 21 TTKVVEYLQPVMCRELLCKFPDNSAFGFDYSQSSLWSPLLPRNYASPSDLDSDSCVC 77

The following BLAST results are available for this feature:

BLAST of CcUC07G137930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876217.1	3.3e-39	90.72	uncharacterized protein LOC120068490 isoform X2 [Benincasa hispida]	[more]
XP_038876207.1	3.3e-39	90.72	uncharacterized protein LOC120068490 isoform X1 [Benincasa hispida]	[more]
XP_022142869.1	3.3e-39	88.66	uncharacterized protein LOC111012878 [Momordica charantia]	[more]
XP_022984340.1	1.2e-36	87.50	uncharacterized protein LOC111482673 isoform X1 [Cucurbita maxima]	[more]
XP_022984341.1	1.2e-36	87.50	uncharacterized protein LOC111482673 isoform X2 [Cucurbita maxima]	[more]

BLAST of CcUC07G137930 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC07G137930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMP9	1.6e-39	88.66	uncharacterized protein LOC111012878 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A6J1J8D3	5.8e-37	87.50	uncharacterized protein LOC111482673 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J4Z5	5.8e-37	87.50	uncharacterized protein LOC111482673 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EYJ9	2.9e-36	85.15	uncharacterized protein LOC111437603 OS=Cucurbita moschata OX=3662 GN=LOC1114376...	[more]
A0A6J1J7J0	1.4e-35	83.51	uncharacterized protein LOC111482071 OS=Cucurbita maxima OX=3661 GN=LOC111482071...	[more]

BLAST of CcUC07G137930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15140.1	9.8e-05	45.61	unknown protein; Has 26 Blast hits to 26 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 138..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR34287:SF12	SUBFAMILY NOT NAMED	coord: 5..99
None	No IPR available	PANTHER	PTHR34287	OS06G0551500 PROTEIN-RELATED	coord: 5..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G137930.1	CcUC07G137930.1	mRNA