CcUC07G132360 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G132360
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr07: 4229963 .. 4233592 (+)
RNA-Seq Expression	CcUC07G132360
Synteny	CcUC07G132360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGAAAAGGGAAGAGATTTATTTTTTTTTTCTTTTTCTTCCTCCTTCTGCCGGCGACGTCGCTCTCACCTCCCCGCCTCTCGCTTCCACCCGTTGTCGTCCCGCTAGTTTCGCTCGCACCATCGCCACGGGTTCCAACACCGTCCGAACGCTTGATTTACCACTGCTGGTCGGTTGCCGTGAGGCACCGCCTCCCATTGGCTTGCCGACAGCGTCGTCGGTCACCTTCCGGTAGGCGTCTAACACCATTTGTATTTTTTTTTTTTATGTTTTTTAAAAGTATTAAACTAATTTTATAGAAAATGTTTTTATAAAAAGAAAAAATGTATTCTTACAAAATACCTTTTTTTTTTCCATAGACAAACGAATCCTAAGTTGTTTTTAATTTTAAGTTTTTAAATTTTTTTAAATAAAATAAAATAAAATAAAAACCCTAGTATTCCCAAATTCTCCTTGGTTTGTCAGTGAGGTAAGGTGTAAGCTTTCATGGGTGGCCTTGATTTATATCTGTAATTTGTGTTGCGCCCTTCTTTATCCTAAATGATTAACCCCTTTGACCAGAGAGAGCCCAAACTCAAACAGAGCGCTGAAATTTGAAATTTTTGATGTTGGTTTTCCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGGTAAGCTAGAAACTTCAAACTTCCTCAATTTCGTTTTAACAATTTCTAAGTGTTTAATCAGACAATTTTCCCCTTTATGTTATAGATATATTGCATTTACTATCACAACAAATTGACATTTAGAGCTACCATTGTCAATTATGTCCACAAGCAAGCTGCACAACCGCTTACTAGTTTCATCACAGCTGAGAGGTGTACTTTTTTTTTTCCTTTTCTGTTCTTGCCTTCTGAGTTTCCTTTCAACCCCATGATTTTGATTTTGATGTTACTTTGATTAAATATAGACGTATTGTTAAGAAGGTTGGGAAGGAGGAACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTAAGCCCATTTTGTTGAATGCCCCTCCAGTATTGAGAGGAAAGAGTGGTAATGTCAATTAGTTTGAAATTCAAATGTTTTTCTAACATATTGTAGGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTCCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAATCAATGGAAGCGTGTCATTCAAGTATGAATAAGTTCGGTTTTACTTGTTGTCTTTTTTGGCCTTTGGCGAATTGGGACCTTGCTCATGATGTTGATTCTAAAGTTGCAGTTGTGTCTGTTAAGAAATCATCTTTGTCTAGCTCTTACTACTATTTCTTTGCTCATTCTTTGGTCAGCTAATGTACTCGTGTGTTAGATTTTTATTGTAACTTTGCATTTATTTGATAAGTTGCGGTTTATTCAGTTTATATATTGAAGTTTGATCTTGAACCTTGGTCATTTGAACTTTCTTATTGTTAAAAATATGATTGAAGAAACAAGAGATAACACTTTGGATTTGGTTGATAAATCAAGTTTCATAATTCCTGTTTAAGATTTAGCTTTATGAGCAGAGAACTGATGGCTGTTGGTTCCAGAGTTGTGAATGATGAAACAACAGCGAGTCCGTGTCTTTGAGATAAATGCTTCTCCAACTTGACACCATATTGCTTAAAGCGATGGAAGCCTCGGTGTTGGACTTGCAAGTTACTTAGGTTTTGACATATAAGAAGATTCTCTGATTAACAAGGAAAGTTAGAAGAAGAAAAGTTGTTGTCTTTACCTTATGTCAATTGCCTGAAGTCCTTTCCTGTAGTAAAGTTTGGGCTTATGAATATTTATGATGGTTTCTGTATGCAATATCCAATATTCAATAGTTGCCATTTTTCCTCCACAAGAAACTGATAACTTAAGACCTTTTCACCTATTGATATCACTTTCATATGTTGAAGTGCCTTGGCTTGATGAGAGTCGGTTAATCAATGCTTCTTATTACTCAGGTGGCAAAGTGGATGTTAGGCAAGGGTCAAGGAGCCACAATGGGAACATATGACACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACACATACACGGTCCATCTCTAAGAGATTGTTTTCTAGGATGATCTCTTTGTATGAACATCATGACTTGCAAGATAAGATTATCGAGGTATTGGGCATTGGATTTCCACATATCGGTTGTACTCCTACGGTCTTACTTCCTGTTCCCCTCTATTTTGAATCTTTTCTTCATACCTTATCATTGATCTCGTGCTTCAACTCCTTCTCTCTTGGTACAGATATTTGCAGACATGGAAGAGTTGGGTGTAAAACCAGATGAAGATACCGTCAGAAGAGTCGGCCGTGCCTTTCAAAAACTAGGACAAGAAGAAAACCGGAAAATTGTCTACAAAAGATATGGATACCAATGGAAATACATACACTTCAAGGGTGAGAGAGTTAGAGTGAGAAGAGATGAATGGGATGAAGATGATGTATGATTGAAGAGCAGAGATGTCTGAACATTGGCATGAACAAGTTCATTGGATCATAAGGTATCTATCTACTGATCGCCGCTAATTATATGCACTTAAGCACGCTGAAACCTAGATTTGCAGTCATAACCTAGTTTTTCTCCTCTGCTCTGATTGAATATTTTAGAACTGCTAACATAGATGATGCAAACATTGCAAGATATATGAATAAGATATGAAAAAAAAAAAAAAAAATGTAGTGTATATGTTAACCAGAGTTCAAAGTTGTTTTCTTGAATCTTGATTCTATTTTAGGCTTGAGGTATGAAAAGAATAGCAATAGGATTGTTTTCATTGGAACGAACAACCCGTTGTCGAATCGGATAAGATTTTCATATCTTTTGCTTTTGCCTACTTATGGAAACAGTAGAAAAGGTATACGAAGGTTGAGTAAATTTCACATCAAACTTTAAATCTTCATTCTGAAGCATCAAGAATAGACAAGCTTTTGATGAAATCACTGCTAGCATTATTTATGCAAAAAGAAAAGTGGACTATAGTTAGATAAGATGGATTTGATTTGAACAATCCCAACAAATTAAACAGATAACATGAACATGAAATGCAAATTCACAAGGGTAGCAGCAAAAGATAGCTTATAATATAATGATAACATGTTAATAATTTATTGATAATATAATGTACATTTTGATGTTTGTTGAATAATTTGAAAGTAGTATTATAATGAATTGTATAGTTTATATATATTATTTGAGATCTATTACATGTAAATTGAAACAAAATCCAAGATCCAGATTGAAGTGGATGTCATTCCTGTCAAGTAGGGAGGACAGCCCCATTGCTCCAACAAAAAACTATTCATAAAATTGTACGGTCGGCATCCACGCATGGTATGGGCATGGCCATGCCCCCAATGTTCTCTTCTTTTCAAAAGATTCTCTATTTTTTCTTTAAGCTTCTTTGTATGTGTATATATTAAATATTTTAATAATTTCAAATAATATTTCGGTTCCTCCAT

mRNA sequence

ATTGGAAAAGGGAAGAGATTTATTTTTTTTTTCTTTTTCTTCCTCCTTCTGCCGGCGACGTCGCTCTCACCTCCCCGCCTCTCGCTTCCACCCGTTGTCGTCCCGCTAGTTTCGCTCGCACCATCGCCACGGGTTCCAACACCGTCCGAACGCTTGATTTACCACTGCTGGTCGGTTGCCGTGAGGCACCGCCTCCCATTGGCTTGCCGACAGCGTCGTCGGTCACCTTCCGAGAGAGCCCAAACTCAAACAGAGCGCTGAAATTTGAAATTTTTGATGTTGGTTTTCCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGATATATTGCATTTACTATCACAACAAATTGACATTTAGAGCTACCATTGTCAATTATGTCCACAAGCAAGCTGCACAACCGCTTACTAGTTTCATCACAGCTGAGAGACGTATTGTTAAGAAGGTTGGGAAGGAGGAACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTCCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAATCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGTTAGGCAAGGGTCAAGGAGCCACAATGGGAACATATGACACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACACATACACGGTCCATCTCTAAGAGATTGTTTTCTAGGATGATCTCTTTGTATGAACATCATGACTTGCAAGATAAGATTATCGAGATATTTGCAGACATGGAAGAGTTGGGTGTAAAACCAGATGAAGATACCGTCAGAAGAGTCGGCCGTGCCTTTCAAAAACTAGGACAAGAAGAAAACCGGAAAATTGTCTACAAAAGATATGGATACCAATGGAAATACATACACTTCAAGGGTGAGAGAGTTAGAGTGAGAAGAGATGAATGGGATGAAGATGATGTATGATTGAAGAGCAGAGATGTCTGAACATTGGCATGAACAAGTTCATTGGATCATAAGATCCAGATTGAAGTGGATGTCATTCCTGTCAAGTAGGGAGGACAGCCCCATTGCTCCAACAAAAAACTATTCATAAAATTGTACGGTCGGCATCCACGCATGGTATGGGCATGGCCATGCCCCCAATGTTCTCTTCTTTTCAAAAGATTCTCTATTTTTTCTTTAAGCTTCTTTGTATGTGTATATATTAAATATTTTAATAATTTCAAATAATATTTCGGTTCCTCCAT

Coding sequence (CDS)

ATGTTGGTTTTCCATGGAAGCTCAACTGGGTTCGATGCCCTCGTGCCGAAGATATATTGCATTTACTATCACAACAAATTGACATTTAGAGCTACCATTGTCAATTATGTCCACAAGCAAGCTGCACAACCGCTTACTAGTTTCATCACAGCTGAGAGACGTATTGTTAAGAAGGTTGGGAAGGAGGAACACCATTTATGGAAGAAAAGAGATTCTGCTGGCTCTGGGCAAAAGGCTCTTAATCTTGTTAGAATTGTTTCCCAATGTCCTAATGAGAAAGAAGCTGTATATGGAGAATTGAATAAGTGGATAGCTTGGGAGACAGAGTTCCCATTGATTGCAGCTGCTAAAGCTTTAAGAATACTGAGGAAGAGAAATCAATGGAAGCGTGTCATTCAAGTGGCAAAGTGGATGTTAGGCAAGGGTCAAGGAGCCACAATGGGAACATATGACACCCTTCTACTGGCATTTGATATGGACAAGAGGGTGGACGAAGCCGAATCCTTATGGAACATGATTTTGCATACACATACACGGTCCATCTCTAAGAGATTGTTTTCTAGGATGATCTCTTTGTATGAACATCATGACTTGCAAGATAAGATTATCGAGATATTTGCAGACATGGAAGAGTTGGGTGTAAAACCAGATGAAGATACCGTCAGAAGAGTCGGCCGTGCCTTTCAAAAACTAGGACAAGAAGAAAACCGGAAAATTGTCTACAAAAGATATGGATACCAATGGAAATACATACACTTCAAGGGTGAGAGAGTTAGAGTGAGAAGAGATGAATGGGATGAAGATGATGTATGA

Protein sequence

MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIVYKRYGYQWKYIHFKGERVRVRRDEWDEDDV

Homology

[Close]

BLAST of CcUC07G132360 vs. NCBI nr
Match: XP_008464896.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis melo] >KAA0051555.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 495.7 bits (1275), Expect = 2.5e-136
Identity = 245/269 (91.08%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIVKKVG 60
           MLV HGSSTGFDALVPKI CIYYHNK  FR   V  VH QAAQP TSF T ERR+VKKVG
Sbjct: 1   MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWML KGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240

Query: 241 YKRYGYQWKYIHFKGERVRVRRDEWDEDD 270
           YKRY  QWKYIHFKGERVRVR+D WDEDD
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDD 269

[Close]

BLAST of CcUC07G132360 vs. NCBI nr
Match: XP_011654973.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 [Cucumis sativus] >KGN50596.1 hypothetical protein Csa_021408 [Cucumis sativus])

HSP 1 Score: 490.7 bits (1262), Expect = 7.9e-135
Identity = 243/268 (90.67%), Postives = 251/268 (93.66%), Query Frame = 0


Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIVKKVG 60
           MLVFHG+STGFDAL+PKI CIYYHNK TF  + V  VH QAAQPLTSF T ERR+VKKVG
Sbjct: 1   MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWML KGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV  AFQKLGQE+NRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240

Query: 241 YKRYGYQWKYIHFKGERVRVRRDEWDED 269
           YKRY  QWKYIHFKGERVRVRRD WDED
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 268

[Close]

BLAST of CcUC07G132360 vs. NCBI nr
Match: XP_038892676.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Benincasa hispida])

HSP 1 Score: 482.3 bits (1240), Expect = 2.8e-132
Identity = 243/269 (90.33%), Postives = 249/269 (92.57%), Query Frame = 0


Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIVKKVG 60
           MLV+HGSSTGFDALVPKI CIY++NKLTFRA  V  VHKQ          AERRIVKKVG
Sbjct: 1   MLVYHGSSTGFDALVPKIDCIYFNNKLTFRAASVKCVHKQ----------AERRIVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWK VIQVAKWML KGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKCVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAF KLGQEEN+K+V
Sbjct: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFHKLGQEENQKMV 240

Query: 241 YKRYGYQWKYIHFKGERVRVRRDEWDEDD 270
           YKRYG QWKYIHFKGERVRVRRD WDEDD
Sbjct: 241 YKRYGCQWKYIHFKGERVRVRRDGWDEDD 259

[Close]

BLAST of CcUC07G132360 vs. NCBI nr
Match: XP_031740922.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 240/268 (89.55%), Postives = 248/268 (92.54%), Query Frame = 0


Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIVKKVG 60
           MLVFHG+STGFDAL+PKI CIYYHNK TF  + V  VH QAAQPLTSF T ERR+VKKVG
Sbjct: 1   MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNL   VSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KETHHLWKKRDSAGSGQKALNL---VSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWML KGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV  AFQKLGQE+NRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240

Query: 241 YKRYGYQWKYIHFKGERVRVRRDEWDED 269
           YKRY  QWKYIHFKGERVRVRRD WDED
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 265

[Close]

BLAST of CcUC07G132360 vs. NCBI nr
Match: XP_023541595.1 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023541609.1 pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 475.7 bits (1223), Expect = 2.6e-130
Identity = 239/270 (88.52%), Postives = 248/270 (91.85%), Query Frame = 0


Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIV-KKV 60
           ML + GSSTGFDALVPK  CIY +NKL FRA  V  VHKQAAQ LTS  TAERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKV 60

Query: 61  GKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKAL 120
           GKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKR+QWKRVIQVAKWML KGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKI 240
           SISKRLFSRMISLY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV  AF+KLGQEEN K+
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKL 240

Query: 241 VYKRYGYQWKYIHFKGERVRVRRDEWDEDD 270
           VYKRYG +WKYIHFKGERVRVRRD WDEDD
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDEDD 270

[Close]

BLAST of CcUC07G132360 vs. ExPASy Swiss-Prot
Match: Q2V3H0 (Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g18975 PE=2 SV=2)

HSP 1 Score: 339.7 bits (870), Expect = 3.0e-92
Identity = 162/213 (76.06%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 50  TAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
           T   + +KKVGK+EHHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKR+QW RVIQ+AKWML KGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKIVYKRYGYQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]

BLAST of CcUC07G132360 vs. ExPASy Swiss-Prot
Match: Q8LG95 (Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX=3702 GN=EMB1417 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.1e-45
Identity = 92/203 (45.32%), Postives = 128/203 (63.05%), Query Frame = 0


Query: 66  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKR 125
           +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL   
Sbjct: 45  VWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDE 104

Query: 126 NQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRL 185
            +WK++IQV KWML KGQG TMGTY +LL A   D R+DEAE LWN +   H     ++ 
Sbjct: 105 KEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 164

Query: 186 FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIVYKRY- 245
           F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  VG+ F KL  ++  + + K+Y 
Sbjct: 165 FNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYP 224

Query: 246 GYQWKYIHFKGERVRVRRDEWDE 268
             QW++ + KG RV+V+  + +E
Sbjct: 225 PPQWEFRYIKGRRVKVKAKQLNE 247

[Close]

BLAST of CcUC07G132360 vs. ExPASy Swiss-Prot
Match: Q9M8W9 (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g04130 PE=2 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 8.8e-04
Identity = 45/181 (24.86%), Postives = 81/181 (44.75%), Query Frame = 0


Query: 58  KVGKEEHHLWKKRDSAGSGQKA-----LNLVRIVSQCPNEKEAVYGELNKWIAWETEFPL 117
           K  + E  LW  ++  G G +        ++R   Q   E   VY  L++  A  +    
Sbjct: 236 KANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQ-QFEFIKVYEMLSEMEANGSPPNS 295

Query: 118 IAAAKALRILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNM 177
           I     +  L  + +++  ++VA  M   G       Y+ L+       R++EAE ++ +
Sbjct: 296 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 355

Query: 178 ILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGV-KPDEDTVRRVGRAFQKL 233
            +     SI+   ++ MI++Y HHD +DK IE+  +ME   +  PD  T + + R+  K 
Sbjct: 356 EMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKR 415

[Close]

BLAST of CcUC07G132360 vs. ExPASy TrEMBL
Match: A0A5A7UD21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00890 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136
Identity = 245/269 (91.08%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIVKKVG 60
           MLV HGSSTGFDALVPKI CIYYHNK  FR   V  VH QAAQP TSF T ERR+VKKVG
Sbjct: 1   MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWML KGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240

Query: 241 YKRYGYQWKYIHFKGERVRVRRDEWDEDD 270
           YKRY  QWKYIHFKGERVRVR+D WDEDD
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDD 269

[Close]

BLAST of CcUC07G132360 vs. ExPASy TrEMBL
Match: A0A1S3CP50 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502655 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.2e-136
Identity = 245/269 (91.08%), Postives = 251/269 (93.31%), Query Frame = 0


Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIVKKVG 60
           MLV HGSSTGFDALVPKI CIYYHNK  FR   V  VH QAAQP TSF T ERR+VKKVG
Sbjct: 1   MLVLHGSSTGFDALVPKIDCIYYHNKCAFRPASVICVHNQAAQPHTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWML KGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRR+GRAFQKLGQEENRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRIGRAFQKLGQEENRKMV 240

Query: 241 YKRYGYQWKYIHFKGERVRVRRDEWDEDD 270
           YKRY  QWKYIHFKGERVRVR+D WDEDD
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRKDGWDEDD 269

[Close]

BLAST of CcUC07G132360 vs. ExPASy TrEMBL
Match: A0A0A0KSA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189910 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 3.8e-135
Identity = 243/268 (90.67%), Postives = 251/268 (93.66%), Query Frame = 0


Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIVKKVG 60
           MLVFHG+STGFDAL+PKI CIYYHNK TF  + V  VH QAAQPLTSF T ERR+VKKVG
Sbjct: 1   MLVFHGTSTGFDALMPKIDCIYYHNKFTFTPSSVICVHNQAAQPLTSFTTPERRVVKKVG 60

Query: 61  KEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120
           KE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR
Sbjct: 61  KETHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALR 120

Query: 121 ILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180
           ILRKR+QWKRVIQVAKWML KGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS
Sbjct: 121 ILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRS 180

Query: 181 ISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIV 240
           ISKR+FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRV  AFQKLGQE+NRK+V
Sbjct: 181 ISKRVFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVCCAFQKLGQEDNRKMV 240

Query: 241 YKRYGYQWKYIHFKGERVRVRRDEWDED 269
           YKRY  QWKYIHFKGERVRVRRD WDED
Sbjct: 241 YKRYSCQWKYIHFKGERVRVRRDGWDED 268

[Close]

BLAST of CcUC07G132360 vs. ExPASy TrEMBL
Match: A0A6J1FWG3 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111447531 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.8e-130
Identity = 238/270 (88.15%), Postives = 247/270 (91.48%), Query Frame = 0


Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIV-KKV 60
           ML + GSSTGFDALVPK  CIY +NKL FRA  V  VHKQAAQ LT   TAERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTGSTTAERRIVKKKV 60

Query: 61  GKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKAL 120
           GKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKR+QWKRVIQVAKWML KGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKI 240
           SISKRLFSRMISLY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV  AF+KLGQEEN K+
Sbjct: 181 SISKRLFSRMISLYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKM 240

Query: 241 VYKRYGYQWKYIHFKGERVRVRRDEWDEDD 270
           VYKRYG +WKYIHFKGERVRVRRD WDEDD
Sbjct: 241 VYKRYGCKWKYIHFKGERVRVRRDGWDEDD 270

[Close]

BLAST of CcUC07G132360 vs. ExPASy TrEMBL
Match: A0A6J1K6G2 (pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111491588 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.1e-129
Identity = 237/270 (87.78%), Postives = 246/270 (91.11%), Query Frame = 0


Query: 1   MLVFHGSSTGFDALVPKIYCIYYHNKLTFRATIVNYVHKQAAQPLTSFITAERRIV-KKV 60
           ML + GSSTGFDALVPK  CIY +NKL FRA  V  VHKQAAQ LTS  TAERRIV KKV
Sbjct: 1   MLAYRGSSTGFDALVPKKVCIYNYNKLAFRAASVKCVHKQAAQSLTSSTTAERRIVKKKV 60

Query: 61  GKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKAL 120
           GKE HHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAA+KAL
Sbjct: 61  GKEAHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAASKAL 120

Query: 121 RILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTR 180
           RILRKR+QWKRVIQVAKWML KGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILH HTR
Sbjct: 121 RILRKRSQWKRVIQVAKWMLSKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHAHTR 180

Query: 181 SISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKI 240
           SISKRLFSRMI+LY+HHDLQDKIIEIFADMEELGV+PDEDTVRRV  AF+KLGQEEN K 
Sbjct: 181 SISKRLFSRMIALYDHHDLQDKIIEIFADMEELGVRPDEDTVRRVAHAFRKLGQEENGKT 240

Query: 241 VYKRYGYQWKYIHFKGERVRVRRDEWDEDD 270
           VYKRYG +WKYIHFK ERVRVRRD WDEDD
Sbjct: 241 VYKRYGCKWKYIHFKSERVRVRRDGWDEDD 270

[Close]

BLAST of CcUC07G132360 vs. TAIR 10
Match: AT4G18975.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 339.7 bits (870), Expect = 2.1e-93
Identity = 162/213 (76.06%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 50  TAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
           T   + +KKVGK+EHHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKR+QW RVIQ+AKWML KGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKIVYKRYGYQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]

BLAST of CcUC07G132360 vs. TAIR 10
Match: AT4G18975.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 339.7 bits (870), Expect = 2.1e-93
Identity = 162/213 (76.06%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 50  TAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
           T   + +KKVGK+EHHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE E
Sbjct: 42  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 101

Query: 110 FPLIAAAKALRILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKR+QW RVIQ+AKWML KGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 102 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 161

Query: 170 WNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 162 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 221

Query: 230 KLGQEENRKIVYKRYGYQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 222 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 254

[Close]

BLAST of CcUC07G132360 vs. TAIR 10
Match: AT4G18975.3 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 339.7 bits (870), Expect = 2.1e-93
Identity = 162/213 (76.06%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 50  TAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
           T   + +KKVGK+EHHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKR+QW RVIQ+AKWML KGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKIVYKRYGYQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]

BLAST of CcUC07G132360 vs. TAIR 10
Match: AT4G18975.4 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 339.7 bits (870), Expect = 2.1e-93
Identity = 162/213 (76.06%), Postives = 188/213 (88.26%), Query Frame = 0


Query: 50  TAERRIVKKVGKEEHHLWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETE 109
           T   + +KKVGK+EHHLWKK DSAGSGQKALNLVR++S  PNEKEAVYG LNKW+AWE E
Sbjct: 69  TVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVYGALNKWVAWEVE 128

Query: 110 FPLIAAAKALRILRKRNQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESL 169
           FP+IAAAKAL+ILRKR+QW RVIQ+AKWML KGQGATMGTYD LLLAFDMD+R DEAESL
Sbjct: 129 FPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAFDMDERADEAESL 188

Query: 170 WNMILHTHTRSISKRLFSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQ 229
           WNMILHTHTRSI +RLF+RMI+LY HHDL DK+IE+FADMEEL V PDED+ RRV RAF+
Sbjct: 189 WNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPDEDSARRVARAFR 248

Query: 230 KLGQEENRKIVYKRYGYQWKYIHFKGERVRVRR 263
           +L QEENRK++ +RY  ++KYI+F GERVRV+R
Sbjct: 249 ELNQEENRKLILRRYLSEYKYIYFNGERVRVKR 281

[Close]

BLAST of CcUC07G132360 vs. TAIR 10
Match: AT4G21190.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 1.5e-46
Identity = 92/203 (45.32%), Postives = 128/203 (63.05%), Query Frame = 0


Query: 66  LWKKRDSAGSGQKALNLVRIVSQCPNEKEAVYGELNKWIAWETEFPLIAAAKALRILRKR 125
           +WK R   G+  KA  ++  +    N KE VYG L+ +IAWE EFPL+   KAL IL   
Sbjct: 45  VWKTRKRIGTISKAAKMIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDE 104

Query: 126 NQWKRVIQVAKWMLGKGQGATMGTYDTLLLAFDMDKRVDEAESLWNMILHTHTRSISKRL 185
            +WK++IQV KWML KGQG TMGTY +LL A   D R+DEAE LWN +   H     ++ 
Sbjct: 105 KEWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF 164

Query: 186 FSRMISLYEHHDLQDKIIEIFADMEELGVKPDEDTVRRVGRAFQKLGQEENRKIVYKRY- 245
           F++MIS+Y   D+  K+ E+FADMEELGVKP+   V  VG+ F KL  ++  + + K+Y 
Sbjct: 165 FNKMISIYYKRDMHQKLFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYP 224

Query: 246 GYQWKYIHFKGERVRVRRDEWDE 268
             QW++ + KG RV+V+  + +E
Sbjct: 225 PPQWEFRYIKGRRVKVKAKQLNE 247

The following BLAST results are available for this feature:

BLAST of CcUC07G132360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464896.1	2.5e-136	91.08	PREDICTED: pentatricopeptide repeat-containing protein At4g18975, chloroplastic ...	[more]
XP_011654973.1	7.9e-135	90.67	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ...	[more]
XP_038892676.1	2.8e-132	90.33	pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Benincasa ...	[more]
XP_031740922.1	1.4e-131	89.55	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X2 ...	[more]
XP_023541595.1	2.6e-130	88.52	pentatricopeptide repeat-containing protein At4g18975, chloroplastic [Cucurbita ...	[more]

BLAST of CcUC07G132360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2V3H0	3.0e-92	76.06	Pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Arabidop...	[more]
Q8LG95	2.1e-45	45.32	Pentatricopeptide repeat-containing protein At4g21190 OS=Arabidopsis thaliana OX...	[more]
Q9M8W9	8.8e-04	24.86	Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidop...	[more]

BLAST of CcUC07G132360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UD21	1.2e-136	91.08	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CP50	1.2e-136	91.08	pentatricopeptide repeat-containing protein At4g18975, chloroplastic isoform X1 ...	[more]
A0A0A0KSA5	3.8e-135	90.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G189910 PE=4 SV=1	[more]
A0A6J1FWG3	4.8e-130	88.15	pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit...	[more]
A0A6J1K6G2	3.1e-129	87.78	pentatricopeptide repeat-containing protein At4g18975, chloroplastic OS=Cucurbit...	[more]

BLAST of CcUC07G132360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18975.1	2.1e-93	76.06	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.2	2.1e-93	76.06	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.3	2.1e-93	76.06	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18975.4	2.1e-93	76.06	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G21190.1	1.5e-46	45.32	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 76..245 e-value: 1.3E-13 score: 52.7
IPR044646	Pentatricopeptide repeat-containing protein EMB1417-like	PANTHER	PTHR46782	OS01G0757700 PROTEIN	coord: 26..266
None	No IPR available	PANTHER	PTHR46782:SF2	OS07G0545900 PROTEIN	coord: 26..266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 182..216 score: 8.506026

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G132360.1	CcUC07G132360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding