CcUC06G128140 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G128140
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	NAC domain-containing protein
Location	CicolChr06: 30149130 .. 30149921 (+)
RNA-Seq Expression	CcUC06G128140
Synteny	CcUC06G128140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGAGAGGATTGCCACCTGGTTTTCGGTTTGAGCCGACGGAAGAAGAGCTTGTATTTGAGTATCTTAAATGCAAAGTGTTCTCCTCTGCCTTGCCTGCTTCTATCATTCCAGAGATCAATGGCGTTTGGAATTTGGATCCTTGGGATATTCCTACAGGCGCAGGTAATTTATTCATTAACTATGCTTAATTTTGACAAATTGGTATGTATTTTAAAATTAAAAGAGGTATTGTTGGGATGGTTGTAGGCGGTGGTGGGCGGGAGGAAGAGAAATACATATTCAGCAAGAAGGAGGCGGAGGCGGAGGAATATAACAATAATGATAATATGGGAATAGCTGGATGGAGTCGGAGTGGGTACTGGAAGGCGAGAAGGTGGGAGAAGGAAATAGTAAGTAGTGAAATTGGAGTTCCATTGATGGGGATGAAGAAGACTCTGGATTTCTGTAGCATTGGAAGCAGCAGCGGCAGCAAGAGGAAGACGAAGAAGACGGGGTGGGTGATGCATGAGTACCGCCTTCAACTCCAACCACATTATTCGTACTCCAACAATACTAATTTGGAGAACAACAAGTGGGTTCTTTGCCGAATCTTTTGCAACAAATTCAATGATGATCATATTATTCAACGCCGCCTTCATTATTCTATTTCTTCCACAAACCATCAAGATCACCTCCTCAGCATTACCCCCAACGCCCTCTCCGACGACGATGATTCCGTTTCCTCCACCGCCTCATCCTCTTCCACCTCCGCCGCTGCAATCCCCAACCATCCTTTTCCCCCCTTCTAA

mRNA sequence

ATGATGAGAGGATTGCCACCTGGTTTTCGGTTTGAGCCGACGGAAGAAGAGCTTGTATTTGAGTATCTTAAATGCAAAGTGTTCTCCTCTGCCTTGCCTGCTTCTATCATTCCAGAGATCAATGGCGTTTGGAATTTGGATCCTTGGGATATTCCTACAGGCGCAGGCGGTGGTGGGCGGGAGGAAGAGAAATACATATTCAGCAAGAAGGAGGCGGAGGCGGAGGAATATAACAATAATGATAATATGGGAATAGCTGGATGGAGTCGGAGTGGGTACTGGAAGGCGAGAAGGTGGGAGAAGGAAATAGTAAGTAGTGAAATTGGAGTTCCATTGATGGGGATGAAGAAGACTCTGGATTTCTGTAGCATTGGAAGCAGCAGCGGCAGCAAGAGGAAGACGAAGAAGACGGGGTGGGTGATGCATGAGTACCGCCTTCAACTCCAACCACATTATTCGTACTCCAACAATACTAATTTGGAGAACAACAAGTGGGTTCTTTGCCGAATCTTTTGCAACAAATTCAATGATGATCATATTATTCAACGCCGCCTTCATTATTCTATTTCTTCCACAAACCATCAAGATCACCTCCTCAGCATTACCCCCAACGCCCTCTCCGACGACGATGATTCCGTTTCCTCCACCGCCTCATCCTCTTCCACCTCCGCCGCTGCAATCCCCAACCATCCTTTTCCCCCCTTCTAA

Coding sequence (CDS)

ATGATGAGAGGATTGCCACCTGGTTTTCGGTTTGAGCCGACGGAAGAAGAGCTTGTATTTGAGTATCTTAAATGCAAAGTGTTCTCCTCTGCCTTGCCTGCTTCTATCATTCCAGAGATCAATGGCGTTTGGAATTTGGATCCTTGGGATATTCCTACAGGCGCAGGCGGTGGTGGGCGGGAGGAAGAGAAATACATATTCAGCAAGAAGGAGGCGGAGGCGGAGGAATATAACAATAATGATAATATGGGAATAGCTGGATGGAGTCGGAGTGGGTACTGGAAGGCGAGAAGGTGGGAGAAGGAAATAGTAAGTAGTGAAATTGGAGTTCCATTGATGGGGATGAAGAAGACTCTGGATTTCTGTAGCATTGGAAGCAGCAGCGGCAGCAAGAGGAAGACGAAGAAGACGGGGTGGGTGATGCATGAGTACCGCCTTCAACTCCAACCACATTATTCGTACTCCAACAATACTAATTTGGAGAACAACAAGTGGGTTCTTTGCCGAATCTTTTGCAACAAATTCAATGATGATCATATTATTCAACGCCGCCTTCATTATTCTATTTCTTCCACAAACCATCAAGATCACCTCCTCAGCATTACCCCCAACGCCCTCTCCGACGACGATGATTCCGTTTCCTCCACCGCCTCATCCTCTTCCACCTCCGCCGCTGCAATCCCCAACCATCCTTTTCCCCCCTTCTAA

Protein sequence

MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEKYIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSIGSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIFCNKFNDDHIIQRRLHYSISSTNHQDHLLSITPNALSDDDDSVSSTASSSSTSAAAIPNHPFPPF

Homology

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BLAST of CcUC06G128140 vs. NCBI nr
Match: XP_038879890.1 (NAC domain-containing protein 83-like [Benincasa hispida])

HSP 1 Score: 325.1 bits (832), Expect = 5.0e-85
Identity = 179/255 (70.20%), Postives = 195/255 (76.47%), Query Frame = 0


Query: 2   MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPT---GAGGG 61
           MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIP+INGVWNLDPWDIP    G GGG
Sbjct: 1   MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPDINGVWNLDPWDIPAGGGGVGGG 60

Query: 62  GREEEKYIFSKKEA--EAEEY--NNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMG 121
            REEEKY+FSKK A  + +EY  NNN+NMGI GWSRSGYWKAR WEKEI+SS+IGV L+G
Sbjct: 61  DREEEKYLFSKKAAAEDEQEYVDNNNNNMGIVGWSRSGYWKARGWEKEILSSDIGVRLVG 120

Query: 122 MKKTLDFCSIGSSSGSKRKTKKTGWVMHEYRLQLQPHYSY--SNNTNLENNKWVLCRIFC 181
           MKKTLDF S          TKKTGWVMH+YRLQL+PH S+  +  TNL NN WVLCRIFC
Sbjct: 121 MKKTLDFYS---------NTKKTGWVMHQYRLQLRPHSSHYSAAATNLVNNNWVLCRIFC 180

Query: 182 NK-FNDDHIIQRRLHYSISSTNHQDHLLS---ITPNALSDDDDSVSSTASSSSTSAA--- 236
           NK FN  H+  R LHYSISSTNHQ   L     T  ALSDDDDS+SSTASSSSTSAA   
Sbjct: 181 NKLFNHHHLTHRPLHYSISSTNHQHQDLDHRHCTITALSDDDDSLSSTASSSSTSAAFTD 240

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BLAST of CcUC06G128140 vs. NCBI nr
Match: XP_008464389.1 (PREDICTED: NAC domain-containing protein 83-like [Cucumis melo])

HSP 1 Score: 260.8 bits (665), Expect = 1.2e-65
Identity = 157/242 (64.88%), Postives = 171/242 (70.66%), Query Frame = 0


Query: 1   MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGR 60
           MMR LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP   GG   
Sbjct: 1   MMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGG--- 60

Query: 61  EEEKYIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLD 120
           +EEKY+FSKKEAE    NNN   GI GWS+SGYWKAR  EKEIVSSE GV LMGMK TLD
Sbjct: 61  DEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLD 120

Query: 121 FCSIGSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIF--CNKFNDD 180
           F      + + RK KKTGWVMH+YRL + PH      ++   NKWVLC I    NK   D
Sbjct: 121 F-----YTNNIRKMKKTGWVMHQYRL-IIPH------SHSSTNKWVLCHILSPTNKL-FD 180

Query: 181 HII-----QRRLHYSISST---------NHQDHLLSITPN-ALSDDD-DSVSSTASSSST 225
           HII     +RRL YSISST          H +H+  IT + A SDD+ DSVSSTASSSST
Sbjct: 181 HIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSST 226

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BLAST of CcUC06G128140 vs. NCBI nr
Match: KAA0057747.1 (NAC domain-containing protein 83-like [Cucumis melo var. makuwa])

HSP 1 Score: 256.1 bits (653), Expect = 2.9e-64
Identity = 155/241 (64.32%), Postives = 169/241 (70.12%), Query Frame = 0


Query: 2   MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGRE 61
           MR LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP   GG   +
Sbjct: 1   MRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGG---D 60

Query: 62  EEKYIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDF 121
           EEKY+FSKKEA     NNN   GI GWS+SGYWKAR  EKEIVSSE GV LMGMK TLDF
Sbjct: 61  EEKYLFSKKEAGEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDF 120

Query: 122 CSIGSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIF--CNKFNDDH 181
                 + + RK KKTGWVMH+YRL + PH      ++   NKWVLC I    NK   DH
Sbjct: 121 -----YTNNIRKMKKTGWVMHQYRL-IIPH------SHSSTNKWVLCHILSPTNKL-FDH 180

Query: 182 II-----QRRLHYSISST---------NHQDHLLSITPN-ALSDDD-DSVSSTASSSSTS 225
           II     +RRL YSISST          H +H+  IT + A SDD+ DSVSSTASSSSTS
Sbjct: 181 IIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTS 225

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BLAST of CcUC06G128140 vs. NCBI nr
Match: XP_004138030.1 (NAC domain-containing protein 83 isoform X2 [Cucumis sativus] >KAE8652374.1 hypothetical protein Csa_014231 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 3.2e-63
Identity = 155/245 (63.27%), Postives = 174/245 (71.02%), Query Frame = 0


Query: 1   MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGR 60
           MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVW+LDPWDIP   GG   
Sbjct: 1   MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGG--- 60

Query: 61  EEEKYIFSKKEAEAEEYNNNDN---MGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKK 120
           +EEKY+FSK   EAEE+NNN+N    GI GWS+SGYWKAR  EKEIVS+E GV LMGMK 
Sbjct: 61  DEEKYLFSK---EAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKN 120

Query: 121 TLDFCSIGSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIF--CNKF 180
           TLDF      + + RK KKTGWVMH+YRL + PH      ++   NKWVLC I    NK 
Sbjct: 121 TLDF-----YTNNIRKMKKTGWVMHQYRL-IIPH------SHSSTNKWVLCHILSPTNKL 180

Query: 181 NDDHII-----QRRLHYSISST---------NHQDHLLSITPN-ALSDDD-DSVSSTASS 225
              HI+     +RRLH SISST          H +H+  IT + A SDD+ DSVSSTASS
Sbjct: 181 -FSHIVHPHRHRRRLHCSISSTKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASS 226

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BLAST of CcUC06G128140 vs. NCBI nr
Match: TYJ98430.1 (exosome complex component RRP4-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 232.6 bits (592), Expect = 3.4e-57
Identity = 144/228 (63.16%), Postives = 158/228 (69.30%), Query Frame = 0


Query: 15  EEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEKYIFSKKEAEA 74
           EEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP   GG   +EEKY+FSKKEAE 
Sbjct: 340 EEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGG---DEEKYLFSKKEAEE 399

Query: 75  EEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSIGSSSGSKRKT 134
              NNN   GI GWS+SGYWKAR  EKEIVSSE GV LMGMK TLDF      + + RK 
Sbjct: 400 YNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDF-----YTNNIRKM 459

Query: 135 KKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIF--CNKFNDDHII-----QRRLHY 194
           KKTGWVMH+YRL + PH      ++   NKWVLC I    NK   DHII     +RRL Y
Sbjct: 460 KKTGWVMHQYRL-IIPH------SHSSTNKWVLCHILSPTNKL-FDHIIHPHRHRRRLRY 519

Query: 195 SISST---------NHQDHLLSITPN-ALSDDD-DSVSSTASSSSTSA 225
           SISST          H +H+  IT + A SDD+ DSVSSTASSSSTSA
Sbjct: 520 SISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSA 551

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BLAST of CcUC06G128140 vs. ExPASy Swiss-Prot
Match: Q9FY93 (NAC domain-containing protein 83 OS=Arabidopsis thaliana OX=3702 GN=NAC083 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.4e-31
Identity = 92/209 (44.02%), Postives = 117/209 (55.98%), Query Frame = 0


Query: 5   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEK 64
           LPPGFRF PT+EELV +YLK KV SS LPASIIPE + V   DPWD+P     G  E+E+
Sbjct: 14  LPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFD-VCRADPWDLP-----GNLEKER 73

Query: 65  YIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSI 124
           Y FS +EA   +Y N +    A  + SGYWKA   +K +V+S  G  ++G+KKTL F   
Sbjct: 74  YFFSTREA---KYPNGNRSNRA--TGSGYWKATGIDKRVVTSR-GNQIVGLKKTLVFYKG 133

Query: 125 GSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIFC-----NKFNDDH 184
               GS     +T W+MHEYRL   P  S     N     WVLCRIF      NK +DD 
Sbjct: 134 KPPHGS-----RTDWIMHEYRLSSSPPSSMGPTQN-----WVLCRIFLKKRAGNKNDDDD 193

Query: 185 IIQRRLHYSISSTNHQDHLLSITPNALSD 209
              R L ++ ++ N  D +  IT +   D
Sbjct: 194 GDSRNLRHN-NNNNSSDQIEIITTDQTDD 199

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BLAST of CcUC06G128140 vs. ExPASy Swiss-Prot
Match: O22798 (NAC domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=NAC041 PE=2 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.6e-25
Identity = 74/171 (43.27%), Postives = 94/171 (54.97%), Query Frame = 0


Query: 5   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEK 64
           LPPGFRF PT+EELV +YL+ KV    LPAS+IPE + V   DPWD+P     G  E E 
Sbjct: 15  LPPGFRFHPTDEELVVQYLRRKVTGLPLPASVIPETD-VCKSDPWDLP-----GDCESEM 74

Query: 65  YIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSI 124
           Y FS +EA+    N ++       + SGYWKA   +K+I   ++   ++GMKKTL F   
Sbjct: 75  YFFSTREAKYPNGNRSNRS-----TGSGYWKATGLDKQIGKKKL---VVGMKKTLVF--- 134

Query: 125 GSSSGSKRKTKKTGWVMHEYRL-QLQPHYSYSNNTNLENNKWVLCRIFCNK 175
               G      +T WV+HEYRL   Q    Y  N N     WVLCR+F  K
Sbjct: 135 --YKGKPPNGTRTNWVLHEYRLVDSQQDSLYGQNMN-----WVLCRVFLKK 161

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BLAST of CcUC06G128140 vs. ExPASy Swiss-Prot
Match: Q9LD44 (NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.7e-24
Identity = 79/210 (37.62%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 5   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEK 64
           LPPGFRF PT+EELV  YLK K  S+ LP +II E++ ++  DPW++P  A  G  E+E 
Sbjct: 17  LPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVD-LYKFDPWELPAKASFG--EQEW 76

Query: 65  YIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSI 124
           Y FS ++    +Y N      A  + SGYWKA   +K +++S+ G   +G+KK L F   
Sbjct: 77  YFFSPRD---RKYPNGARPNRA--ATSGYWKATGTDKPVLASD-GNQKVGVKKALVF--- 136

Query: 125 GSSSGSKRKTKKTGWVMHEYRL------QLQPHYSYSNNTN-LENNKWVLCRIFCNKFND 184
              SG   K  K+ W+MHEYRL         P   + N  N L  + WVLCRI+      
Sbjct: 137 --YSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNAS 196

Query: 185 DHIIQRRLHYSISSTNHQDHLLSITPNALS 208
            H+   + H  I      D++    P +LS
Sbjct: 197 RHVDNDKDHDMI------DYIFRKIPPSLS 206

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BLAST of CcUC06G128140 vs. ExPASy Swiss-Prot
Match: A0SPJ6 (NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM-B2 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-23
Identity = 71/177 (40.11%), Postives = 95/177 (53.67%), Query Frame = 0


Query: 5   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEK 64
           LPPGFRF PT+EELV  YLK K     LP +II E++ ++  DPW++P  A  G  E+E 
Sbjct: 28  LPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVD-LYKFDPWELPEKATFG--EQEW 87

Query: 65  YIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSI 124
           Y FS ++    +Y N      A  + SGYWKA   +K I++S  G   +G+KK L F   
Sbjct: 88  YFFSPRD---RKYPNGARPNRA--ATSGYWKATGTDKPILASGCGREKVGVKKALVF--- 147

Query: 125 GSSSGSKRKTKKTGWVMHEYRL----------QLQPHYSYSNNTNLENNKWVLCRIF 172
               G   K  KT W+MHEYRL          +  P    S + +L  + WVLCRI+
Sbjct: 148 --YRGKPPKGLKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIY 191

[Close]

BLAST of CcUC06G128140 vs. ExPASy Swiss-Prot
Match: O49255 (NAC transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=NAC029 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.7e-23
Identity = 69/167 (41.32%), Postives = 89/167 (53.29%), Query Frame = 0


Query: 5   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEK 64
           LPPGFRF PT+EEL+  YL+ +  S   P SIIPE++ ++  DPW +P     G  E E 
Sbjct: 9   LPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVD-IYKFDPWQLPEKTEFG--ENEW 68

Query: 65  YIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSI 124
           Y FS +E    +Y N      A  + SGYWKA   +K I S    V   G+KK L F   
Sbjct: 69  YFFSPRE---RKYPNGVRPNRA--AVSGYWKATGTDKAIHSGSSNV---GVKKALVF--- 128

Query: 125 GSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIF 172
               G   K  KT W+MHEYRL      S   N ++  ++WVLCRI+
Sbjct: 129 --YKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIY 159

[Close]

BLAST of CcUC06G128140 vs. ExPASy TrEMBL
Match: A0A1S3CLH3 (NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103502292 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 5.6e-66
Identity = 157/242 (64.88%), Postives = 171/242 (70.66%), Query Frame = 0


Query: 1   MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGR 60
           MMR LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP   GG   
Sbjct: 1   MMRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGG--- 60

Query: 61  EEEKYIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLD 120
           +EEKY+FSKKEAE    NNN   GI GWS+SGYWKAR  EKEIVSSE GV LMGMK TLD
Sbjct: 61  DEEKYLFSKKEAEEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLD 120

Query: 121 FCSIGSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIF--CNKFNDD 180
           F      + + RK KKTGWVMH+YRL + PH      ++   NKWVLC I    NK   D
Sbjct: 121 F-----YTNNIRKMKKTGWVMHQYRL-IIPH------SHSSTNKWVLCHILSPTNKL-FD 180

Query: 181 HII-----QRRLHYSISST---------NHQDHLLSITPN-ALSDDD-DSVSSTASSSST 225
           HII     +RRL YSISST          H +H+  IT + A SDD+ DSVSSTASSSST
Sbjct: 181 HIIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSST 226

[Close]

BLAST of CcUC06G128140 vs. ExPASy TrEMBL
Match: A0A5A7USS6 (NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00280 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.4e-64
Identity = 155/241 (64.32%), Postives = 169/241 (70.12%), Query Frame = 0


Query: 2   MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGRE 61
           MR LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP   GG   +
Sbjct: 1   MRRLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGG---D 60

Query: 62  EEKYIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDF 121
           EEKY+FSKKEA     NNN   GI GWS+SGYWKAR  EKEIVSSE GV LMGMK TLDF
Sbjct: 61  EEKYLFSKKEAGEYNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDF 120

Query: 122 CSIGSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIF--CNKFNDDH 181
                 + + RK KKTGWVMH+YRL + PH      ++   NKWVLC I    NK   DH
Sbjct: 121 -----YTNNIRKMKKTGWVMHQYRL-IIPH------SHSSTNKWVLCHILSPTNKL-FDH 180

Query: 182 II-----QRRLHYSISST---------NHQDHLLSITPN-ALSDDD-DSVSSTASSSSTS 225
           II     +RRL YSISST          H +H+  IT + A SDD+ DSVSSTASSSSTS
Sbjct: 181 IIHPHRHRRRLRYSISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTS 225

[Close]

BLAST of CcUC06G128140 vs. ExPASy TrEMBL
Match: A0A0A0LR52 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G000770 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.5e-63
Identity = 155/245 (63.27%), Postives = 174/245 (71.02%), Query Frame = 0


Query: 1   MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGR 60
           MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVW+LDPWDIP   GG   
Sbjct: 146 MMRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWSLDPWDIPAAGGG--- 205

Query: 61  EEEKYIFSKKEAEAEEYNNNDN---MGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKK 120
           +EEKY+FSK   EAEE+NNN+N    GI GWS+SGYWKAR  EKEIVS+E GV LMGMK 
Sbjct: 206 DEEKYLFSK---EAEEHNNNNNGEGGGIIGWSKSGYWKARGREKEIVSNENGVALMGMKN 265

Query: 121 TLDFCSIGSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIF--CNKF 180
           TLDF      + + RK KKTGWVMH+YRL + PH      ++   NKWVLC I    NK 
Sbjct: 266 TLDF-----YTNNIRKMKKTGWVMHQYRL-IIPH------SHSSTNKWVLCHILSPTNKL 325

Query: 181 NDDHII-----QRRLHYSISST---------NHQDHLLSITPN-ALSDDD-DSVSSTASS 225
              HI+     +RRLH SISST          H +H+  IT + A SDD+ DSVSSTASS
Sbjct: 326 -FSHIVHPHRHRRRLHCSISSTKDVNGDHEDEHDEHVNHITTSTAFSDDEHDSVSSTASS 371

[Close]

BLAST of CcUC06G128140 vs. ExPASy TrEMBL
Match: A0A5D3BF59 (Exosome complex component RRP4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00280 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.6e-57
Identity = 144/228 (63.16%), Postives = 158/228 (69.30%), Query Frame = 0


Query: 15  EEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEKYIFSKKEAEA 74
           EEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIP   GG   +EEKY+FSKKEAE 
Sbjct: 340 EEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPAAGGG---DEEKYLFSKKEAEE 399

Query: 75  EEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSIGSSSGSKRKT 134
              NNN   GI GWS+SGYWKAR  EKEIVSSE GV LMGMK TLDF      + + RK 
Sbjct: 400 YNNNNNGEGGIIGWSKSGYWKARGREKEIVSSENGVALMGMKSTLDF-----YTNNIRKM 459

Query: 135 KKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIF--CNKFNDDHII-----QRRLHY 194
           KKTGWVMH+YRL + PH      ++   NKWVLC I    NK   DHII     +RRL Y
Sbjct: 460 KKTGWVMHQYRL-IIPH------SHSSTNKWVLCHILSPTNKL-FDHIIHPHRHRRRLRY 519

Query: 195 SISST---------NHQDHLLSITPN-ALSDDD-DSVSSTASSSSTSA 225
           SISST          H +H+  IT + A SDD+ DSVSSTASSSSTSA
Sbjct: 520 SISSTKDENGDDQDEHDEHVNHITTSTAFSDDEHDSVSSTASSSSTSA 551

[Close]

BLAST of CcUC06G128140 vs. ExPASy TrEMBL
Match: A0A6J1JHP2 (NAC domain-containing protein 83-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485807 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 5.8e-47
Identity = 133/239 (55.65%), Postives = 153/239 (64.02%), Query Frame = 0


Query: 2   MRGLPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPE-INGVWNLDPWDIPTGAGGGGR 61
           MRGLPPGFRFEPTEEELVFEYLKCKVFS ALPASIIPE    V NLDPWDIP   GGGG 
Sbjct: 1   MRGLPPGFRFEPTEEELVFEYLKCKVFSFALPASIIPETTTSVCNLDPWDIP--GGGGGW 60

Query: 62  EEEKYIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEI-GVPLMGMKKTL 121
           EE+ Y+FSK         N +      WS SGYWKA+  E++IVSS    V L+GM+KTL
Sbjct: 61  EEDAYLFSK---------NQECDRRVRWSPSGYWKAKGSERKIVSSSSDAVGLVGMRKTL 120

Query: 122 DFCSIGSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENN--KWVLCRIFCNKF-- 181
            F  +GSSS     ++KTGWVMHEYRL L P  + +  + + NN  KWV+CRI CN    
Sbjct: 121 VFW-MGSSS-----SRKTGWVMHEYRLLLSPTQAPTPPSVVINNMEKWVVCRIVCNNSGI 180

Query: 182 -NDDHIIQRRLHYSISSTNHQDHLLSITPNALSDDDDSVSSTASSSSTSAAA---IPNH 231
            ND H     L Y +S++ + D       NALS  DDSVSSTASSSS SA      PNH
Sbjct: 181 KNDLHF--HPLQYPVSASTNDD------TNALS--DDSVSSTASSSSFSATTTMPFPNH 212

[Close]

BLAST of CcUC06G128140 vs. TAIR 10
Match: AT5G13180.1 (NAC domain containing protein 83 )

HSP 1 Score: 135.6 bits (340), Expect = 5.2e-32
Identity = 92/209 (44.02%), Postives = 117/209 (55.98%), Query Frame = 0


Query: 5   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEK 64
           LPPGFRF PT+EELV +YLK KV SS LPASIIPE + V   DPWD+P     G  E+E+
Sbjct: 14  LPPGFRFHPTDEELVVQYLKRKVCSSPLPASIIPEFD-VCRADPWDLP-----GNLEKER 73

Query: 65  YIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSI 124
           Y FS +EA   +Y N +    A  + SGYWKA   +K +V+S  G  ++G+KKTL F   
Sbjct: 74  YFFSTREA---KYPNGNRSNRA--TGSGYWKATGIDKRVVTSR-GNQIVGLKKTLVFYKG 133

Query: 125 GSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIFC-----NKFNDDH 184
               GS     +T W+MHEYRL   P  S     N     WVLCRIF      NK +DD 
Sbjct: 134 KPPHGS-----RTDWIMHEYRLSSSPPSSMGPTQN-----WVLCRIFLKKRAGNKNDDDD 193

Query: 185 IIQRRLHYSISSTNHQDHLLSITPNALSD 209
              R L ++ ++ N  D +  IT +   D
Sbjct: 194 GDSRNLRHN-NNNNSSDQIEIITTDQTDD 199

[Close]

BLAST of CcUC06G128140 vs. TAIR 10
Match: AT2G33480.2 (NAC domain containing protein 41 )

HSP 1 Score: 118.2 bits (295), Expect = 8.7e-27
Identity = 73/170 (42.94%), Postives = 94/170 (55.29%), Query Frame = 0


Query: 5   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEK 64
           LPPGFRF PT+EELV +YL+ KV    LPAS+IPE + V   DPWD+P     G  E E 
Sbjct: 15  LPPGFRFHPTDEELVVQYLRRKVTGLPLPASVIPETD-VCKSDPWDLP-----GDCESEM 74

Query: 65  YIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSI 124
           Y FS +EA+    N ++       + SGYWKA   +K+I   ++   ++GMKKTL F   
Sbjct: 75  YFFSTREAKYPNGNRSNRS-----TGSGYWKATGLDKQIGKKKL---VVGMKKTLVF--- 134

Query: 125 GSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIFCNK 175
               G      +T WV+HEYRL        S   +L N  WVLCR+F  K
Sbjct: 135 --YKGKPPNGTRTNWVLHEYRL------VDSQQDSLYNMNWVLCRVFLKK 159

[Close]

BLAST of CcUC06G128140 vs. TAIR 10
Match: AT2G33480.1 (NAC domain containing protein 41 )

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-26
Identity = 74/171 (43.27%), Postives = 94/171 (54.97%), Query Frame = 0


Query: 5   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEK 64
           LPPGFRF PT+EELV +YL+ KV    LPAS+IPE + V   DPWD+P     G  E E 
Sbjct: 15  LPPGFRFHPTDEELVVQYLRRKVTGLPLPASVIPETD-VCKSDPWDLP-----GDCESEM 74

Query: 65  YIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSI 124
           Y FS +EA+    N ++       + SGYWKA   +K+I   ++   ++GMKKTL F   
Sbjct: 75  YFFSTREAKYPNGNRSNRS-----TGSGYWKATGLDKQIGKKKL---VVGMKKTLVF--- 134

Query: 125 GSSSGSKRKTKKTGWVMHEYRL-QLQPHYSYSNNTNLENNKWVLCRIFCNK 175
               G      +T WV+HEYRL   Q    Y  N N     WVLCR+F  K
Sbjct: 135 --YKGKPPNGTRTNWVLHEYRLVDSQQDSLYGQNMN-----WVLCRVFLKK 161

[Close]

BLAST of CcUC06G128140 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 )

HSP 1 Score: 112.1 bits (279), Expect = 6.2e-25
Identity = 79/210 (37.62%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 5   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEK 64
           LPPGFRF PT+EELV  YLK K  S+ LP +II E++ ++  DPW++P  A  G  E+E 
Sbjct: 17  LPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVD-LYKFDPWELPAKASFG--EQEW 76

Query: 65  YIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSI 124
           Y FS ++    +Y N      A  + SGYWKA   +K +++S+ G   +G+KK L F   
Sbjct: 77  YFFSPRD---RKYPNGARPNRA--ATSGYWKATGTDKPVLASD-GNQKVGVKKALVF--- 136

Query: 125 GSSSGSKRKTKKTGWVMHEYRL------QLQPHYSYSNNTN-LENNKWVLCRIFCNKFND 184
              SG   K  K+ W+MHEYRL         P   + N  N L  + WVLCRI+      
Sbjct: 137 --YSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYKKNNAS 196

Query: 185 DHIIQRRLHYSISSTNHQDHLLSITPNALS 208
            H+   + H  I      D++    P +LS
Sbjct: 197 RHVDNDKDHDMI------DYIFRKIPPSLS 206

[Close]

BLAST of CcUC06G128140 vs. TAIR 10
Match: AT1G69490.1 (NAC-like, activated by AP3/PI )

HSP 1 Score: 109.4 bits (272), Expect = 4.0e-24
Identity = 69/167 (41.32%), Postives = 89/167 (53.29%), Query Frame = 0


Query: 5   LPPGFRFEPTEEELVFEYLKCKVFSSALPASIIPEINGVWNLDPWDIPTGAGGGGREEEK 64
           LPPGFRF PT+EEL+  YL+ +  S   P SIIPE++ ++  DPW +P     G  E E 
Sbjct: 9   LPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVD-IYKFDPWQLPEKTEFG--ENEW 68

Query: 65  YIFSKKEAEAEEYNNNDNMGIAGWSRSGYWKARRWEKEIVSSEIGVPLMGMKKTLDFCSI 124
           Y FS +E    +Y N      A  + SGYWKA   +K I S    V   G+KK L F   
Sbjct: 69  YFFSPRE---RKYPNGVRPNRA--AVSGYWKATGTDKAIHSGSSNV---GVKKALVF--- 128

Query: 125 GSSSGSKRKTKKTGWVMHEYRLQLQPHYSYSNNTNLENNKWVLCRIF 172
               G   K  KT W+MHEYRL      S   N ++  ++WVLCRI+
Sbjct: 129 --YKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIY 159

The following BLAST results are available for this feature:

BLAST of CcUC06G128140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879890.1	5.0e-85	70.20	NAC domain-containing protein 83-like [Benincasa hispida]	[more]
XP_008464389.1	1.2e-65	64.88	PREDICTED: NAC domain-containing protein 83-like [Cucumis melo]	[more]
KAA0057747.1	2.9e-64	64.32	NAC domain-containing protein 83-like [Cucumis melo var. makuwa]	[more]
XP_004138030.1	3.2e-63	63.27	NAC domain-containing protein 83 isoform X2 [Cucumis sativus] >KAE8652374.1 hypo...	[more]
TYJ98430.1	3.4e-57	63.16	exosome complex component RRP4-like protein [Cucumis melo var. makuwa]	[more]

BLAST of CcUC06G128140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FY93	7.4e-31	44.02	NAC domain-containing protein 83 OS=Arabidopsis thaliana OX=3702 GN=NAC083 PE=1 ...	[more]
O22798	1.6e-25	43.27	NAC domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=NAC041 PE=2 ...	[more]
Q9LD44	8.7e-24	37.62	NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1	[more]
A0SPJ6	2.5e-23	40.11	NAC transcription factor NAM-B2 OS=Triticum turgidum subsp. durum OX=4567 GN=NAM...	[more]
O49255	5.7e-23	41.32	NAC transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=NAC029 PE=2 SV=1	[more]

BLAST of CcUC06G128140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CLH3	5.6e-66	64.88	NAC domain-containing protein 83-like OS=Cucumis melo OX=3656 GN=LOC103502292 PE...	[more]
A0A5A7USS6	1.4e-64	64.32	NAC domain-containing protein 83-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0LR52	1.5e-63	63.27	NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G000770 PE=4 SV...	[more]
A0A5D3BF59	1.6e-57	63.16	Exosome complex component RRP4-like protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1JHP2	5.8e-47	55.65	NAC domain-containing protein 83-like isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of CcUC06G128140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13180.1	5.2e-32	44.02	NAC domain containing protein 83	[more]
AT2G33480.2	8.7e-27	42.94	NAC domain containing protein 41	[more]
AT2G33480.1	1.1e-26	43.27	NAC domain containing protein 41	[more]
AT3G15510.1	6.2e-25	37.62	NAC domain containing protein 2	[more]
AT1G69490.1	4.0e-24	41.32	NAC-like, activated by AP3/PI	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 6..146 e-value: 8.9E-26 score: 91.3
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 5..173 score: 38.321239
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 14..176 e-value: 4.9E-33 score: 116.1
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 2..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..227
None	No IPR available	PANTHER	PTHR31989:SF175	NAC DOMAIN CONTAINING PROTEIN 97	coord: 5..182
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 5..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G128140.1	CcUC06G128140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding