
CcUC06G128020 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTCTCAATTGCTGCCACGTGTTCCTCTTTTTCACGTCTTATAAAAATCTTCCCCCCTTCCTCTTTGACCAATCACCACTACAATTCCCATTTCCCAATTTCCTCCTTCATTTTCCCCCTTTCAATTTCAATCTGCTGTAGAAATATGAGTAAATTTTGGACGTTGGTCACCCAACTTCATACTCTTTCTGGGTCAGTGTAAATTAAACTAAATCAAATCTCTCTTTAACTTCAATAAAACCGAACGGCATGATAATTTTGGATGTGGGTTTTGTATTTCTGTGGCTAATTATTTTGTTTTCGATCATTCGTGCAGGCCTGTTTTGATGTTGCTGTATCCTCTGTAAGTTTATATCCGTCTTTCTTTCTGTGATGCTGTGTCTTAAGGAAAAAAATTGTTTTAAACTTTTGCAATACAACAGATATGCGTCGGTGGTAGCCATGGAAAGCACCTCCAAATTGGATGATGAGCAGTGGTTGGCTTATTGGATCATCTACTCCTTTCTCACTCTCATGGACATGGTTCTTCAACCTCTATTAGAGTGGTCAGTGCAAGTTCTAGATTTCTCCTCTTTTTCTTTTCAGTTACAAAATTACCCAGATGGGTTTTTGGTTTCCCTGTTTTCTCTTCTCTAAGATTCTTGGCTGAAATGAAAGAAACATTTGTGGGTATATAGAAGTTACTTTTAATGGCTTTTGTGTCGTATAAGTAAAAATCTGAGGGAGTATTCGATATTTTGAGTTGCAGGATACCAATTTGGTATTCGGTGAAATTGGTATTTGTGGCGTGGTTGGTTCTGCCACAGTTCAAAGGTGCAGCTTTCTTGTATGAAAGATTCGTGAGGCATCATATTAAGAAATATGGTGTAGGAAGTAATTCTGCTGATGCCAAAGCCAAGAATCACTAATTCACATAATTAGTGAGTTTTCTTCTTTTAATAATTATGATGACTACACACCTCGCCATTGCGGGTTCATTTCACACTCATCTTTCTGAAAAGAAGTTTGTTTTTTTTTTTTTTTCTACAAATGTACTAATGAGATGCCTTTAATCTGCTTCTTGTCTCCTTTTGTGAAGTGGATTAGGAAGGGAGCTGGAATCTTGATGAAGAAGGTATCATAAAGAAGAGTTTGTTTCTTTGTGGTGGACCATCTTTCTGGATTTGACTTCTTTTTTGTCTCTTTTTTTGGTTTGGTTGTGCTAAACAGAACTAGTATTGGACTTGCTTGTAAATGGAACAACTCTTTTTTCTTCTCCCTAGTTTTATAAAGCTTTAGCTGTGTTTGTGTGTCATCAACTCTATCAAATTATATTGACAATTTTAACC TGTCTCAATTGCTGCCACGTGTTCCTCTTTTTCACGTCTTATAAAAATCTTCCCCCCTTCCTCTTTGACCAATCACCACTACAATTCCCATTTCCCAATTTCCTCCTTCATTTTCCCCCTTTCAATTTCAATCTGCTGTAGAAATATGAGTAAATTTTGGACGTTGGTCACCCAACTTCATACTCTTTCTGGGCCTGTTTTGATGTTGCTGTATCCTCTATATGCGTCGGTGGTAGCCATGGAAAGCACCTCCAAATTGGATGATGAGCAGTGGTTGGCTTATTGGATCATCTACTCCTTTCTCACTCTCATGGACATGGTTCTTCAACCTCTATTAGAGTGGATACCAATTTGGTATTCGGTGAAATTGGTATTTGTGGCGTGGTTGGTTCTGCCACAGTTCAAAGGTGCAGCTTTCTTGTATGAAAGATTCGTGAGGCATCATATTAAGAAATATGGTGTAGGAAGTAATTCTGCTGATGCCAAAGCCAAGAATCACTAATTCACATAATTATGGATTAGGAAGGGAGCTGGAATCTTGATGAAGAAGGTATCATAAAGAAGAGTTTGTTTCTTTGTGGTGGACCATCTTTCTGGATTTGACTTCTTTTTTGTCTCTTTTTTTGGTTTGGTTGTGCTAAACAGAACTAGTATTGGACTTGCTTGTAAATGGAACAACTCTTTTTTCTTCTCCCTAGTTTTATAAAGCTTTAGCTGTGTTTGTGTGTCATCAACTCTATCAAATTATATTGACAATTTTAACC ATGAGTAAATTTTGGACGTTGGTCACCCAACTTCATACTCTTTCTGGGCCTGTTTTGATGTTGCTGTATCCTCTATATGCGTCGGTGGTAGCCATGGAAAGCACCTCCAAATTGGATGATGAGCAGTGGTTGGCTTATTGGATCATCTACTCCTTTCTCACTCTCATGGACATGGTTCTTCAACCTCTATTAGAGTGGATACCAATTTGGTATTCGGTGAAATTGGTATTTGTGGCGTGGTTGGTTCTGCCACAGTTCAAAGGTGCAGCTTTCTTGTATGAAAGATTCGTGAGGCATCATATTAAGAAATATGGTGTAGGAAGTAATTCTGCTGATGCCAAAGCCAAGAATCACTAA MSKFWTLVTQLHTLSGPVLMLLYPLYASVVAMESTSKLDDEQWLAYWIIYSFLTLMDMVLQPLLEWIPIWYSVKLVFVAWLVLPQFKGAAFLYERFVRHHIKKYGVGSNSADAKAKNH Homology
BLAST of CcUC06G128020 vs. NCBI nr
Match: XP_038879469.1 (HVA22-like protein e [Benincasa hispida] >XP_038879470.1 HVA22-like protein e [Benincasa hispida]) HSP 1 Score: 224.2 bits (570), Expect = 6.0e-55 Identity = 109/118 (92.37%), Postives = 114/118 (96.61%), Query Frame = 0
BLAST of CcUC06G128020 vs. NCBI nr
Match: XP_004138037.1 (HVA22-like protein e [Cucumis sativus] >XP_031736094.1 HVA22-like protein e [Cucumis sativus] >KGN63469.1 hypothetical protein Csa_013331 [Cucumis sativus]) HSP 1 Score: 223.8 bits (569), Expect = 7.9e-55 Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of CcUC06G128020 vs. NCBI nr
Match: XP_008464408.1 (PREDICTED: HVA22-like protein e [Cucumis melo] >XP_008464409.1 PREDICTED: HVA22-like protein e [Cucumis melo] >KAA0057759.1 HVA22-like protein e [Cucumis melo var. makuwa]) HSP 1 Score: 221.9 bits (564), Expect = 3.0e-54 Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of CcUC06G128020 vs. NCBI nr
Match: XP_022921987.1 (HVA22-like protein e [Cucurbita moschata] >XP_022921988.1 HVA22-like protein e [Cucurbita moschata] >XP_022921989.1 HVA22-like protein e [Cucurbita moschata] >XP_022921990.1 HVA22-like protein e [Cucurbita moschata] >XP_022921991.1 HVA22-like protein e [Cucurbita moschata] >XP_023515539.1 HVA22-like protein e [Cucurbita pepo subsp. pepo] >XP_023515540.1 HVA22-like protein e [Cucurbita pepo subsp. pepo] >KAG6589370.1 HVA22-like protein d, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023053.1 HVA22-like protein d [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53 Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of CcUC06G128020 vs. NCBI nr
Match: XP_022988245.1 (HVA22-like protein e isoform X1 [Cucurbita maxima] >XP_022988246.1 HVA22-like protein e isoform X1 [Cucurbita maxima] >XP_022988247.1 HVA22-like protein e isoform X1 [Cucurbita maxima] >XP_022988248.1 HVA22-like protein e isoform X1 [Cucurbita maxima]) HSP 1 Score: 215.7 bits (548), Expect = 2.1e-52 Identity = 108/119 (90.76%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of CcUC06G128020 vs. ExPASy Swiss-Prot
Match: Q9S760 (HVA22-like protein d OS=Arabidopsis thaliana OX=3702 GN=HVA22D PE=2 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 1.4e-41 Identity = 78/106 (73.58%), Postives = 95/106 (89.62%), Query Frame = 0
BLAST of CcUC06G128020 vs. ExPASy Swiss-Prot
Match: Q9FED2 (HVA22-like protein e OS=Arabidopsis thaliana OX=3702 GN=HVA22E PE=2 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 8.8e-41 Identity = 76/106 (71.70%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of CcUC06G128020 vs. ExPASy Swiss-Prot
Match: Q07764 (Protein HVA22 OS=Hordeum vulgare OX=4513 GN=HVA22 PE=2 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 1.8e-38 Identity = 73/118 (61.86%), Postives = 95/118 (80.51%), Query Frame = 0
BLAST of CcUC06G128020 vs. ExPASy Swiss-Prot
Match: Q9S7V4 (HVA22-like protein a OS=Arabidopsis thaliana OX=3702 GN=HVA22A PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 7.5e-24 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 0
BLAST of CcUC06G128020 vs. ExPASy Swiss-Prot
Match: Q682H0 (HVA22-like protein f OS=Arabidopsis thaliana OX=3702 GN=HVA22F PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 2.2e-23 Identity = 53/113 (46.90%), Postives = 75/113 (66.37%), Query Frame = 0
BLAST of CcUC06G128020 vs. ExPASy TrEMBL
Match: A0A0A0LR70 (HVA22-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G001410 PE=3 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 3.8e-55 Identity = 110/118 (93.22%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of CcUC06G128020 vs. ExPASy TrEMBL
Match: A0A1S3CLE5 (HVA22-like protein OS=Cucumis melo OX=3656 GN=LOC103502305 PE=3 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54 Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of CcUC06G128020 vs. ExPASy TrEMBL
Match: A0A5A7UW26 (HVA22-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00410 PE=3 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54 Identity = 109/118 (92.37%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of CcUC06G128020 vs. ExPASy TrEMBL
Match: A0A6J1E5B8 (HVA22-like protein OS=Cucurbita moschata OX=3662 GN=LOC111430077 PE=3 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 7.2e-54 Identity = 109/119 (91.60%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of CcUC06G128020 vs. ExPASy TrEMBL
Match: A0A6J1JJ20 (HVA22-like protein OS=Cucurbita maxima OX=3661 GN=LOC111485557 PE=3 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.0e-52 Identity = 108/119 (90.76%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of CcUC06G128020 vs. TAIR 10
Match: AT4G24960.1 (HVA22 homologue D ) HSP 1 Score: 170.2 bits (430), Expect = 9.6e-43 Identity = 78/106 (73.58%), Postives = 95/106 (89.62%), Query Frame = 0
BLAST of CcUC06G128020 vs. TAIR 10
Match: AT5G50720.1 (HVA22 homologue E ) HSP 1 Score: 167.5 bits (423), Expect = 6.2e-42 Identity = 76/106 (71.70%), Postives = 94/106 (88.68%), Query Frame = 0
BLAST of CcUC06G128020 vs. TAIR 10
Match: AT4G24960.3 (HVA22 homologue D ) HSP 1 Score: 146.4 bits (368), Expect = 1.5e-35 Identity = 68/87 (78.16%), Postives = 80/87 (91.95%), Query Frame = 0
BLAST of CcUC06G128020 vs. TAIR 10
Match: AT4G24960.2 (HVA22 homologue D ) HSP 1 Score: 125.6 bits (314), Expect = 2.7e-29 Identity = 57/75 (76.00%), Postives = 68/75 (90.67%), Query Frame = 0
BLAST of CcUC06G128020 vs. TAIR 10
Match: AT1G74520.1 (HVA22 homologue A ) HSP 1 Score: 111.3 bits (277), Expect = 5.3e-25 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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