CcUC06G126770 (gene) Watermelon (PI 537277) v1

BLAST of CcUC06G126770 vs. NCBI nr
Match: XP_038878920.1 (RNA-dependent RNA polymerase 2 [Benincasa hispida])

HSP 1 Score: 2159.4 bits (5594), Expect = 0.0e+00
Identity = 1064/1117 (95.26%), Postives = 1093/1117 (97.85%), Query Frame = 0

Query: 1    MAQPERSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTT 60
            MAQPERSTLKVSNVPESAIAQDL TFL+SKLGPDS+FAIEIFTERKNWKSRG GRVQFTT
Sbjct: 1    MAQPERSTLKVSNVPESAIAQDLWTFLSSKLGPDSIFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 61   LEAKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMS 120
            LE KSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNR ENGVLHVGFMLKEDRM 
Sbjct: 61   LETKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRAENGVLHVGFMLKEDRMC 120

Query: 121  VLESWEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180
            VLESW+GVK WIMPERRR EFWIWH +ECYKLEVMFEEILETTG+CLG EKLNALLLKLK
Sbjct: 121  VLESWDGVKAWIMPERRRVEFWIWHEKECYKLEVMFEEILETTGFCLGHEKLNALLLKLK 180

Query: 181  YAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
            YAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFS MRSVGQSTSFCWEVEEDL
Sbjct: 181  YAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSAMRSVGQSTSFCWEVEEDL 240

Query: 241  QAADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQ 300
             A+++F  FPFY+ETQKDIVLED EEFG++SEIVPLIK GLGSNL YEVQYQLNSLVHMQ
Sbjct: 241  LASNIFLSFPFYRETQKDIVLEDGEEFGTSSEIVPLIKFGLGSNLVYEVQYQLNSLVHMQ 300

Query: 301  KISLAAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPS 360
            KISLAAAND+LI+FLS+LD DTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNL  
Sbjct: 301  KISLAAANDDLINFLSTLDVDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLSL 360

Query: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKL 420
            SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFAS+ASDFMRVTFVEEDWSKL
Sbjct: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASYASDFMRVTFVEEDWSKL 420

Query: 421  PAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFA 480
            PAGAVTTSIQRGILSKPYRTEIYHRI+ ILRDGI+IGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421  PAGAVTTSIQRGILSKPYRTEIYHRIMNILRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480

Query: 481  SSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540
            SS+ LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG
Sbjct: 481  SSNNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540

Query: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
            IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600

Query: 601  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKA 660
            LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGV DESFEALQQEQLHLLGRMLTDK 
Sbjct: 601  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVQDESFEALQQEQLHLLGRMLTDKV 660

Query: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKG 720
            VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMM+QAHYWNLFSDLRSRCRI+VPKG
Sbjct: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMIQAHYWNLFSDLRSRCRIFVPKG 720

Query: 721  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 780
            RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH
Sbjct: 721  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 780

Query: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840
            PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPP+
Sbjct: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPR 840

Query: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900
            TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC
Sbjct: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900

Query: 901  LELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 960
            LELAALHSMAVDFAKTGAPAEMPR+LKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI
Sbjct: 901  LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 960

Query: 961  ERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEI 1020
            E+ERSRLVWSEEAARA+YDHDLEVDGFEAFLE+AESYKD+YIEKMSILMNYYGAEYEDEI
Sbjct: 961  EQERSRLVWSEEAARAVYDHDLEVDGFEAFLEMAESYKDLYIEKMSILMNYYGAEYEDEI 1020

Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYHV 1080
            LMGDLRSRASYLQRDNRKYGDMKDRILL +K+LRKEVKEWFENSCAPHEHKMMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSMKNLRKEVKEWFENSCAPHEHKMMASAWYHV 1080

Query: 1081 TYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHRA 1118
            TYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRH+A
Sbjct: 1081 TYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHQA 1117

BLAST of CcUC06G126770 vs. NCBI nr
Match: XP_008453109.1 (PREDICTED: RNA-dependent RNA polymerase 2 [Cucumis melo])

HSP 1 Score: 2124.7 bits (5504), Expect = 0.0e+00
Identity = 1050/1117 (94.00%), Postives = 1080/1117 (96.69%), Query Frame = 0

Query: 1    MAQPERSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTT 60
            MAQPERSTL+VSNVPESAIAQDLL FL SKLGPDSVFAIEIFTERKNWKSRG GRVQFTT
Sbjct: 1    MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 61   LEAKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMS 120
            LEAK+KA +LSVQNNLVF + NLRFS INDDIVVRPVHA NRTENGVLHVGFMLKE+RMS
Sbjct: 61   LEAKAKAMALSVQNNLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120

Query: 121  VLESWEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180
            VLESWEGVK WIMPERRR EFWIWH QECYKLEVMFEEILETTGYCLG+EKLNALL KLK
Sbjct: 121  VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGYCLGEEKLNALLFKLK 180

Query: 181  YAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
            YAPRIYKKISGSNMAS+FSSTRYRLC EDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL
Sbjct: 181  YAPRIYKKISGSNMASKFSSTRYRLCVEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240

Query: 241  QAADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQ 300
            QA+D+FS FPFYKETQKDIVLED EEF STSEIVPLIK GLGSNLAYEV+YQLNSLVHMQ
Sbjct: 241  QASDIFSYFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ 300

Query: 301  KISLAAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPS 360
            KISLAAAN +LIDFL +LD DTALNVLQRLHQLKFICYDPLSFLKTQLHV KRNCK+LP 
Sbjct: 301  KISLAAANQDLIDFLCTLDIDTALNVLQRLHQLKFICYDPLSFLKTQLHVFKRNCKSLPL 360

Query: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKL 420
            SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNF+S+ASDFMRVTFVEEDWSKL
Sbjct: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 420

Query: 421  PAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFA 480
            PAGAVTTSIQRGILSKPYRT IYHRI+TILRDGI+IGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421  PAGAVTTSIQRGILSKPYRTNIYHRIVTILRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480

Query: 481  SSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540
            SSD LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG
Sbjct: 481  SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540

Query: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
            IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600

Query: 601  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKA 660
            LKFESKNKMLNVTK  DSMPCYLNREIVTLLSTLGV DESFEALQQEQLHLL RMLTDKA
Sbjct: 601  LKFESKNKMLNVTKCCDSMPCYLNREIVTLLSTLGVKDESFEALQQEQLHLLKRMLTDKA 660

Query: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKG 720
            VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRI+VPKG
Sbjct: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720

Query: 721  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 780
            RILLGCLDETGILNYGQVYACITLTKSELQ+RNQ YFH IDETKSIL+GKVVVTKNPCLH
Sbjct: 721  RILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILIGKVVVTKNPCLH 780

Query: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840
            PGDVRVLEAIFHVELEEKGLVDCLIFPQKG RPHTNECSGGDLDGDLYFISWDENLIPPK
Sbjct: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGPRPHTNECSGGDLDGDLYFISWDENLIPPK 840

Query: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900
            TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALS+KC
Sbjct: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900

Query: 901  LELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 960
            LELAALHSMAVDFAKTGAPAEMPR+LKPREFPDFMERFDKPMYIS+NVLGKLYRAA+KSI
Sbjct: 901  LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAIKSI 960

Query: 961  ERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEI 1020
            E+ERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAE+YK+MYIEKMSILMNYYGAEYEDEI
Sbjct: 961  EQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020

Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYHV 1080
            LMGDLRSRASYLQRDNRKYGDMKDRILL VK LRKEVKEWFENSC PH+ +MMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKSLRKEVKEWFENSCDPHQRRMMASAWYHV 1080

Query: 1081 TYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHRA 1118
            TYHPSYFKEDMFYFSFPW VSDVLLNIKA NSKRH+A
Sbjct: 1081 TYHPSYFKEDMFYFSFPWAVSDVLLNIKATNSKRHQA 1117

BLAST of CcUC06G126770 vs. NCBI nr
Match: NP_001267608.1 (RNA-dependent RNA polymerase 2-like [Cucumis sativus] >ADU77018.1 RNA-dependent RNA polymerase 2 [Cucumis sativus] >KGN63597.1 hypothetical protein Csa_013751 [Cucumis sativus])

HSP 1 Score: 2110.1 bits (5466), Expect = 0.0e+00
Identity = 1044/1117 (93.46%), Postives = 1077/1117 (96.42%), Query Frame = 0

Query: 1    MAQPERSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTT 60
            MAQPERSTL+VSNVPESAIAQDLL FL SKLGPDSVFAIEIFTERKNWKSRG GRVQFTT
Sbjct: 1    MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 61   LEAKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMS 120
            LEAK+KA SLSVQN+LVF + NLRFS INDDIVVRPVHA NRTENGVLHVGFMLKE+RMS
Sbjct: 61   LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120

Query: 121  VLESWEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180
            VLESWEGVK WIMPERRR EFWIWH QECYKLEVMFEEILETTG+CLG+EKLNALLLKLK
Sbjct: 121  VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK 180

Query: 181  YAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
            YAPRIYKKISGSNMASRFSSTRYRLC EDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL
Sbjct: 181  YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240

Query: 241  QAADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQ 300
            QA+D+FS FPFYKETQKDIVLED EEF STSEIVPLIK GLGSNLAYEV+YQLNSLVHMQ
Sbjct: 241  QASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ 300

Query: 301  KISLAAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPS 360
            KISL+AAN +LIDFL +LD DTALNVLQRLHQLKF+CYDPLSFLKTQLHV KRNCK+LP 
Sbjct: 301  KISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP 360

Query: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKL 420
            SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNF+S+ASDFMRVTFVEEDWSKL
Sbjct: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 420

Query: 421  PAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFA 480
            PAGAVTTSIQRGILSKPYRTEIYHRI+T+LRDGI+IGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421  PAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480

Query: 481  SSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540
            SSD LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT+DVEIIPDIEVN+DG
Sbjct: 481  SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDG 540

Query: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
            IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600

Query: 601  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKA 660
            LKFESKNKMLNVTK  DSMPCYLNREI TLLSTLGV DESFEALQQEQLHLL RMLTDK 
Sbjct: 601  LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD 660

Query: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKG 720
            VALNVLEN HGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRI+VPKG
Sbjct: 661  VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720

Query: 721  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 780
            RILLGCLDETGILNYGQVYACITLTKSELQ RNQ YFH IDETKSILLGKVVVTKNPCLH
Sbjct: 721  RILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVVVTKNPCLH 780

Query: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840
            PGDVRVLEAIFHVELEEKGLVDCLIFPQKG RPHTNECSGGDLDGDLYFISWDENLIPPK
Sbjct: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 840

Query: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900
            TEAPMDYTGRRPRIMDHDV LEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALS+KC
Sbjct: 841  TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900

Query: 901  LELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 960
            LELAALHSMAVDFAKTGAPAEMPR+LKPREFPDFMERFDKPMYIS+NVLGKLYRAAVKSI
Sbjct: 901  LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 960

Query: 961  ERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEI 1020
            E+ERSRLVWSEEAARAIYD+DLEVDGFEAFLEIAE+YK+MYIEKMSILMNYYGAEYEDEI
Sbjct: 961  EQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020

Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYHV 1080
            LMGDLRSRASYLQRDNRKYGDMKDRILL VK+LRKEVKEWFENSC P   +MMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHV 1080

Query: 1081 TYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHRA 1118
            TYHPSYFKEDMFYFSFPW VSDVLLNIKAMNSKRH+A
Sbjct: 1081 TYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQA 1117

BLAST of CcUC06G126770 vs. NCBI nr
Match: XP_023516327.1 (RNA-dependent RNA polymerase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2094.3 bits (5425), Expect = 0.0e+00
Identity = 1029/1117 (92.12%), Postives = 1075/1117 (96.24%), Query Frame = 0

Query: 1    MAQPERSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTT 60
            M QP+RSTL+VSNVPESA+A+DLLTFL SKLGPDSVFAIEIFTERKNWKSRG GRVQFTT
Sbjct: 1    MGQPKRSTLRVSNVPESAVAEDLLTFLKSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 61   LEAKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMS 120
            LEAKSKAQSLSVQNNLVFN+HNLRFSE NDDI+VRP+HARNRTENGVLHVGFMLKED MS
Sbjct: 61   LEAKSKAQSLSVQNNLVFNTHNLRFSETNDDIIVRPIHARNRTENGVLHVGFMLKEDHMS 120

Query: 121  VLESWEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180
            VLESWEGVK WIMPERRR EFWIWH  ECYKLEVMFEEILETTGYCLGDEKLNALLLKLK
Sbjct: 121  VLESWEGVKAWIMPERRRVEFWIWHEDECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180

Query: 181  YAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
            YAPRIYK+ISGSNMAS+FSS+RYRLC+E++DYLW+RTTEFS +RS+GQSTSFCWEVEEDL
Sbjct: 181  YAPRIYKRISGSNMASKFSSSRYRLCKEEHDYLWIRTTEFSSLRSIGQSTSFCWEVEEDL 240

Query: 241  QAADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQ 300
            QA+D+FS FP Y+ET KDI LED  EFGSTSE VPLIK GL SNLAYE+QYQLNSLVHMQ
Sbjct: 241  QASDIFSSFPLYRETPKDITLEDGGEFGSTSEAVPLIKSGLVSNLAYELQYQLNSLVHMQ 300

Query: 301  KISLAAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPS 360
            KISLAAA+++LI+FLS+L  DTALN+LQRLHQLKFICYDPLSFLKTQLHVLKRNCK LPS
Sbjct: 301  KISLAAASNDLIEFLSTLGTDTALNILQRLHQLKFICYDPLSFLKTQLHVLKRNCKVLPS 360

Query: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKL 420
             SQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFAS+ASDFMRVTFVEEDWSKL
Sbjct: 361  LSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASYASDFMRVTFVEEDWSKL 420

Query: 421  PAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFA 480
            PAGAVTTSIQRG+LSKPYRTEIYHRI++ILR+GI+IGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421  PAGAVTTSIQRGLLSKPYRTEIYHRIVSILRNGIVIGAKRFEFLAFSASQLRSNSVWMFA 480

Query: 481  SSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540
            SSD LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG
Sbjct: 481  SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540

Query: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
            IDYCFSDGIGKISLSFARQVADKCG+ HIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541  IDYCFSDGIGKISLSFARQVADKCGLTHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600

Query: 601  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKA 660
            LKFESKNKMLNVTK SDSMPCYLNREIVTLLSTLGV DESFEALQQEQLHLL RMLTDK 
Sbjct: 601  LKFESKNKMLNVTKCSDSMPCYLNREIVTLLSTLGVKDESFEALQQEQLHLLRRMLTDKV 660

Query: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKG 720
             ALNVLENL+GADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRI+VPKG
Sbjct: 661  AALNVLENLNGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720

Query: 721  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 780
            RILLGCLDETGILNYGQVYACITLTKSEL+DRNQ YFHKIDETKSILLGKVVVTKNPCLH
Sbjct: 721  RILLGCLDETGILNYGQVYACITLTKSELRDRNQNYFHKIDETKSILLGKVVVTKNPCLH 780

Query: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840
            PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK
Sbjct: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840

Query: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900
            TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC
Sbjct: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900

Query: 901  LELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 960
            LELAALHSMAVD+AKTGAPAEMPR+LKPREFPDFMERFDKPMY SNNVLGKLYRAAVK++
Sbjct: 901  LELAALHSMAVDYAKTGAPAEMPRVLKPREFPDFMERFDKPMYKSNNVLGKLYRAAVKTM 960

Query: 961  ERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEI 1020
            E+ERSRLVW+EE ARAIYDHDLEVDGFEAFLE AES+K MYIEKMSILMNYYGAE+EDEI
Sbjct: 961  EQERSRLVWTEETARAIYDHDLEVDGFEAFLETAESFKVMYIEKMSILMNYYGAEFEDEI 1020

Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYHV 1080
            LMGDLRSRASYLQRDNRKYGDMKDRILL VK +RKE KEWFENSCAPHEHKMMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKCVRKEAKEWFENSCAPHEHKMMASAWYHV 1080

Query: 1081 TYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHRA 1118
            TYHPSYFK+DMFYFSFPW V DVLLNIKAMNSKR  A
Sbjct: 1081 TYHPSYFKQDMFYFSFPWIVHDVLLNIKAMNSKRREA 1117

BLAST of CcUC06G126770 vs. NCBI nr
Match: KAG6589458.1 (RNA-dependent RNA polymerase 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023142.1 RNA-dependent RNA polymerase 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2090.1 bits (5414), Expect = 0.0e+00
Identity = 1029/1117 (92.12%), Postives = 1072/1117 (95.97%), Query Frame = 0

Query: 1    MAQPERSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTT 60
            M QPERSTL+VSNVPESA+A+DLLTFL SKLGPDSVFAIEIFTERKNWKSRG GRVQFTT
Sbjct: 1    MGQPERSTLRVSNVPESAVAEDLLTFLKSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 61   LEAKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMS 120
            LEAKSKAQSLSVQNNLVF++HNLRFSE NDDI+VRP+HARNRTENGVLHVGFMLKED MS
Sbjct: 61   LEAKSKAQSLSVQNNLVFSTHNLRFSETNDDIIVRPIHARNRTENGVLHVGFMLKEDHMS 120

Query: 121  VLESWEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180
            VLESWEGVK WIMPERRR EFWIW   ECYKLEVMFEEILETTGYCLGDEKLNALLLKLK
Sbjct: 121  VLESWEGVKAWIMPERRRVEFWIWREDECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180

Query: 181  YAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
            YAPRIYKKISGSNMAS+FSS+RYRLC+E++DYLW+RTTEFS +RS+GQSTSFCWEVEEDL
Sbjct: 181  YAPRIYKKISGSNMASKFSSSRYRLCKEEHDYLWIRTTEFSSLRSIGQSTSFCWEVEEDL 240

Query: 241  QAADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQ 300
            QA+D+FS FP Y+ET KDI LED  EFGSTSE VPLIK GL SNLAYEVQYQLNSLVHMQ
Sbjct: 241  QASDIFSSFPLYRETPKDITLEDGGEFGSTSEAVPLIKSGLVSNLAYEVQYQLNSLVHMQ 300

Query: 301  KISLAAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPS 360
            KISLAAA+++LI+FLS+L  DTALN+LQRLHQLKFICYDPLSFLKTQLHVLKRNCK LPS
Sbjct: 301  KISLAAASNDLIEFLSTLGTDTALNILQRLHQLKFICYDPLSFLKTQLHVLKRNCKVLPS 360

Query: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKL 420
             SQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFAS+ASDFMRVTFVEEDWSKL
Sbjct: 361  LSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASYASDFMRVTFVEEDWSKL 420

Query: 421  PAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFA 480
            PAGAVTTSIQRG+LSKPYRTEIYHRI++ILR+GI+IGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421  PAGAVTTSIQRGLLSKPYRTEIYHRIVSILRNGIVIGAKRFEFLAFSASQLRSNSVWMFA 480

Query: 481  SSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540
            SSD LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG
Sbjct: 481  SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540

Query: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
            IDYCFSDGIGKISLSFARQVADKCG+ HIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541  IDYCFSDGIGKISLSFARQVADKCGLTHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600

Query: 601  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKA 660
            LKFESKNKMLNVTK SDSMPCYLNREIVTLLSTLGV DESFEALQQEQLHLL RML DK 
Sbjct: 601  LKFESKNKMLNVTKCSDSMPCYLNREIVTLLSTLGVKDESFEALQQEQLHLLRRMLMDKV 660

Query: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKG 720
             ALNVLENL+GADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRI+VPKG
Sbjct: 661  AALNVLENLNGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720

Query: 721  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 780
            RILLGCLDETGILNYGQVYACITLTKSEL+DRNQ YFHKIDETKSILLGKVVVTKNPCLH
Sbjct: 721  RILLGCLDETGILNYGQVYACITLTKSELRDRNQNYFHKIDETKSILLGKVVVTKNPCLH 780

Query: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840
            PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK
Sbjct: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840

Query: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900
            TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC
Sbjct: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900

Query: 901  LELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 960
            LELAALHSMAVD+AKTGAPAEMPR+LKPREFPDFMERFDKPMY SNNVLGKLYRAAVK++
Sbjct: 901  LELAALHSMAVDYAKTGAPAEMPRVLKPREFPDFMERFDKPMYKSNNVLGKLYRAAVKTM 960

Query: 961  ERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEI 1020
            E+ERSRLVW+EE A AIYDHDLEVDGFEAFLE AES+K MYIEKMSILMNYYGAEYEDEI
Sbjct: 961  EQERSRLVWTEETATAIYDHDLEVDGFEAFLETAESFKVMYIEKMSILMNYYGAEYEDEI 1020

Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYHV 1080
            LMGDLRSRASYLQRDNRKYGDMKDRILL VK +RKE KEWFENSCAPHEHKMMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKCVRKEAKEWFENSCAPHEHKMMASAWYHV 1080

Query: 1081 TYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHRA 1118
            TYHPSYFK+DMFYFSFPW V DVLLNIKAMNSKR  A
Sbjct: 1081 TYHPSYFKQDMFYFSFPWIVHDVLLNIKAMNSKRREA 1117

BLAST of CcUC06G126770 vs. ExPASy Swiss-Prot
Match: O82504 (RNA-dependent RNA polymerase 2 OS=Arabidopsis thaliana OX=3702 GN=RDR2 PE=1 SV=1)

HSP 1 Score: 1404.4 bits (3634), Expect = 0.0e+00
Identity = 689/1116 (61.74%), Postives = 864/1116 (77.42%), Query Frame = 0

Query: 6    RSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTTLEAKS 65
            RST+K+SNVP++ +A +LL FL   LG D+VFA+EI T R NWK R F RVQFTTLE KS
Sbjct: 9    RSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKS 68

Query: 66   KAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGF-MLKEDRMSVLES 125
            +AQ LS Q+ L+F +HNLR SE  DDI+ RPV  R R ++ VL VGF    E R   LE 
Sbjct: 69   RAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEK 128

Query: 126  WEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCL-GD-EKLNALLLKLKYA 185
            W+GV+ WI+ E+RR EFW+W   +CYK+EV FE+I+ET   C+ GD  +++A LLKLKY 
Sbjct: 129  WDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYG 188

Query: 186  PRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQA 245
            P+++K+++  ++A++F S RYR C+ED+D++W+RTT+FS  +S+G ST FC EV      
Sbjct: 189  PKVFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTM 248

Query: 246  ADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVG-LGSNLAYEVQYQLNSLVHMQK 305
             D+FS  P+Y+E    +   D + F S ++IVPL+    LG    YE+ +QLN+LVH QK
Sbjct: 249  LDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQK 308

Query: 306  ISLAAAND-ELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPS 365
            ISL AA+D ELI  L  +  +TAL +L++LHQ   ICYDP+ F+KTQ+  + +  K+ P+
Sbjct: 309  ISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPA 368

Query: 366  SSQKRLS-NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSK 425
            S+ KRL+  N+M+C R  VTPS+IY LGPELET+NYVVKNFA H SDFMRVTFVEEDWSK
Sbjct: 369  SAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSK 428

Query: 426  LPAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMF 485
            LPA A++ + + G   KP RT IY+R+++IL +GI +G KRFEFLAFSASQLR NSVWMF
Sbjct: 429  LPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMF 488

Query: 486  ASSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSD 545
            AS++K+KAE+IR+WMGCF KIRSISKCAARMGQLFS+S QTL+V  QDVE IPDIEV +D
Sbjct: 489  ASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTD 548

Query: 546  GIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDS 605
            G DYCFSDGIGKISL+FA+QVA KCG++H+PSAFQIRYGGYKGVIAVDR+SFRKLSLRDS
Sbjct: 549  GADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDS 608

Query: 606  MLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDK 665
            MLKF+S N+MLNVT+W++SMPC+LNREI+ LLSTLG+ D  FEA+Q   L +LG ML D+
Sbjct: 609  MLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDR 668

Query: 666  AVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPK 725
              ALNVL+ L G +S N+LV+ML  GY P+ EPYLSMML+ H+ +  S+L+SRCRI VPK
Sbjct: 669  DAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPK 728

Query: 726  GRILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCL 785
            GRIL+GC+DE GIL YGQVY  +TLTK+EL+ R+Q YF KIDE  S+++GKVVVTKNPCL
Sbjct: 729  GRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCL 788

Query: 786  HPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPP 845
            HPGD+RVL+AI+ V  EEKG +DC+IFPQKGERPH NECSGGDLDGD +F+SWDE +IP 
Sbjct: 789  HPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPS 848

Query: 846  KTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSK 905
            + + PMDY G RPR+MDHDVTLEEI KFFVDYMI+DTLG ISTAHLVHADR+P+KA S K
Sbjct: 849  EMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQK 908

Query: 906  CLELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKS 965
            CLELA LHS AVDFAKTGAPAEMP  LKPREFPDF+ERF+KP YIS +V GKLYRA   S
Sbjct: 909  CLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKSS 968

Query: 966  IERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDE 1025
            + + +     +E      YD  LE  GFE+F+E A++++DMY EK++ LM YYGA  E+E
Sbjct: 969  LAQRKPE---AESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEE 1028

Query: 1026 ILMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEH-KMMASAWY 1085
            IL G L+++  YL RDNR+YGDMKDRI L VK L KE   WFE SC   +  K +ASAWY
Sbjct: 1029 ILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCEDEQQKKKLASAWY 1088

Query: 1086 HVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKR 1115
            +VTY+P++  E + + SFPW V DVLL+IKA N++R
Sbjct: 1089 YVTYNPNHRDEKLTFLSFPWIVGDVLLDIKAENAQR 1120

BLAST of CcUC06G126770 vs. ExPASy Swiss-Prot
Match: Q7XM31 (Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1)

HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 574/1117 (51.39%), Postives = 767/1117 (68.67%), Query Frame = 0

Query: 7    STLKVSNVPESAIAQDLLTFLTSKLG-PDSVFAIEIFTERKNWKSRGFGRVQFTTLEAKS 66
            ++L+VSN+P SA+A +LL F  S +      FA EI    + W SRG G VQF +  A +
Sbjct: 10   ASLRVSNIPPSAVAAELLAFFDSAVAVAGGAFACEIAAAHRGWLSRGHGTVQFGSAAAAA 69

Query: 67   KAQSLSVQNNLV-FNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMSVLES 126
             A  L+    L  F    L  S    D++ R      R     L VG  + E      ++
Sbjct: 70   AAAGLASSGRLPRFLGALLSVSPSPVDLLPRASDLSLRAAGAGLVVGDRVAERVFEAADA 129

Query: 127  WEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLKYAPR 186
            W+GV+  ++P +RR + ++ H  + YKLEV+FE++ +  G  L  + + A+LL+L YAPR
Sbjct: 130  WDGVRAEVIPGKRRVDLYLEHDSQRYKLEVLFEDMKDCLGCTL--DGMGAILLQLNYAPR 189

Query: 187  IYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQAAD 246
            I+  ISG  + SRF   R+  C+ED  + WVR  +F+P  S G+ ++   ++ +    +D
Sbjct: 190  IHTAISGPAVNSRFMDDRFHACKEDAKFSWVRALDFTPNYSFGRCSTLVLKLGKSALVSD 249

Query: 247  VFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQKISL 306
            +    PF      ++ +   +  G++S +VPL+      ++ YEV ++LNSL+HM KI  
Sbjct: 250  ILKSLPF-SGNLGELTMNSMDGVGASSNVVPLVHCPRDYSVPYEVLFRLNSLMHMGKIVA 309

Query: 307  AAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPSS-SQ 366
               N +L   L  L  D +  + +++H+L+  CY PL F++ + + +KR+   L S+  +
Sbjct: 310  KHVNADLFKALQELPVDVSRRIFEKMHKLESTCYGPLQFIQQEAYSMKRSHNVLLSNEGE 369

Query: 367  KRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKLPAG 426
                  +M CYRV +TPS+I+C GPE E +NYVVK+ +++ASDF+RVTFV+EDWSKL + 
Sbjct: 370  GEGERKLMKCYRVNITPSKIFCFGPEEEVTNYVVKHHSAYASDFVRVTFVDEDWSKLSSN 429

Query: 427  AVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFASSD 486
            A++  I++G  SKP++T +Y+RI++IL+ G  IG K FEFLAFSASQLR NSVWMFAS+ 
Sbjct: 430  AISARIEQGFFSKPFKTGLYYRILSILKKGFSIGPKNFEFLAFSASQLRGNSVWMFASNA 489

Query: 487  KLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDGIDY 546
             L A  IR+WMG FE IRS+SKCAARMGQLFSSS QT  V   DVE+IPDIE+ +DG  Y
Sbjct: 490  SLNAGGIRRWMGHFENIRSVSKCAARMGQLFSSSRQTFEVLRWDVEVIPDIEITTDGSKY 549

Query: 547  CFSDGIGKISLSFARQVADKCGVN--HIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSML 606
             FSDGIGKISL FA++VA   G++  ++PSAFQIRYGGYKGVIA+D  S   LSLR SM 
Sbjct: 550  IFSDGIGKISLRFAKRVAHHVGLDPTNLPSAFQIRYGGYKGVIAIDPMSSIDLSLRPSMK 609

Query: 607  KFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKAV 666
            KFES+++MLN+T WS S PCY+NREI++LLSTLG+ DE F A+QQ+++     MLT+K V
Sbjct: 610  KFESESRMLNITSWSKSQPCYVNREIISLLSTLGIRDEIFVAMQQDEMRETEEMLTNKEV 669

Query: 667  ALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKGR 726
            AL+VL  L G+++    V+ML  GYEP+ EPYLSM+L+AH  N  +D+R+RC+I+VPKGR
Sbjct: 670  ALSVLGKLGGSETKT-AVKMLLQGYEPSSEPYLSMILKAHQENRLTDIRTRCKIHVPKGR 729

Query: 727  ILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLHP 786
            +L+GCLDETG+L YGQVY  IT    E +D NQ YF+  D   + ++GKV +TKNPCLHP
Sbjct: 730  VLIGCLDETGVLEYGQVYIRITKNSKEQKDSNQSYFYNDDGKTATVVGKVAITKNPCLHP 789

Query: 787  GDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPKT 846
            GD+RVLEAI+  +L   G+VDCL+FPQ+GERPH NECSGGDLDGDLYFI+WD+ LIP K 
Sbjct: 790  GDIRVLEAIYDPDL--VGMVDCLVFPQRGERPHPNECSGGDLDGDLYFITWDDKLIPEKV 849

Query: 847  EAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKCL 906
            + PMDYT  RPRIMDH VTLEEIQK FVDYMIND+LGAISTAHL+HADR P KA S +CL
Sbjct: 850  DTPMDYTATRPRIMDHVVTLEEIQKHFVDYMINDSLGAISTAHLIHADRSPLKARSPECL 909

Query: 907  ELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSIE 966
            +LA LHSMAVDFAKTGAPAEMPR L+PRE+PDFMER++KPMYISN VLGKLYR+A+  +E
Sbjct: 910  QLATLHSMAVDFAKTGAPAEMPRTLRPREYPDFMERWEKPMYISNGVLGKLYRSAMGHME 969

Query: 967  RERSRLVWSEEAAR--AIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDE 1026
            +       S  +A+    YD DLEV G + FL+ AE Y ++Y EK++ LMNYY AE EDE
Sbjct: 970  KSGDSGALSSSSAQPSPTYDPDLEVPGSDEFLQAAEEYYELYEEKLTTLMNYYRAELEDE 1029

Query: 1027 ILMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYH 1086
            IL G++R++  YL+RDN++Y +MKDRI+  V  L +E + W  +S    +   MASAWY 
Sbjct: 1030 ILTGNIRNKMLYLKRDNKRYFEMKDRIVAAVDALHREARGWLLSSRKEEDASRMASAWYR 1089

Query: 1087 VTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHR 1117
            VTYHP   +   F+ SFPW   D LL IKA +  R R
Sbjct: 1090 VTYHPDRRRGKRFW-SFPWIACDNLLAIKASSQLRRR 1119

BLAST of CcUC06G126770 vs. ExPASy Swiss-Prot
Match: Q9LQV2 (RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana OX=3702 GN=RDR1 PE=2 SV=1)

HSP 1 Score: 756.5 bits (1952), Expect = 4.2e-217
Identity = 451/1123 (40.16%), Postives = 656/1123 (58.41%), Query Frame = 0

Query: 8    TLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTTLEAKSKA 67
            T++V   P    A+++  FL    G  +V+AI++  + K    R +  VQFT+ E  ++ 
Sbjct: 4    TIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKV-RQPKKGGPRVYAIVQFTS-ERHTRL 63

Query: 68   QSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMSVLESWEG 127
               +    L +    L+  E+  DIV +P  + +      +  G  +   +   L S + 
Sbjct: 64   IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQD 123

Query: 128  VKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLKYAPRIYK 187
            V V      R+  F     Q+ Y+LE+ +E I +   +         L++++  AP+I++
Sbjct: 124  VCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFE 183

Query: 188  KISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQAADVFS 247
            K    +              +  D  W+RTT+F+    +GQST+FC E+   L   D   
Sbjct: 184  K---EDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 243

Query: 248  IFPFYKETQ-KDIVLEDCEEFGSTSE-IVPLIKVGLGSNLAYEVQYQLNSLVHMQKISLA 307
             F  Y E +    ++E    + S +  +VP++    G +L +E+ ++LN+LV    +S  
Sbjct: 244  NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 303

Query: 308  AANDELIDFLSSLDFDTAL--NVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPSSSQ 367
            A + +    L+   +D AL  + L++L  L   CY+P  +L+ +        K LP S  
Sbjct: 304  ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGK-LPLSPT 363

Query: 368  KRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKLPAG 427
              L + ++  YRV VTP+R+Y  GPE+  SN V+++++ + ++F+RV+FV+ED  K+ + 
Sbjct: 364  ISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSM 423

Query: 428  AVT--TSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFAS 487
             ++  +S QR       RT++Y RI ++LRDGI+IG K+FEFLAFS+SQLR NS WMFA 
Sbjct: 424  DLSPRSSTQR-------RTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAP 483

Query: 488  SDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDGI 547
             D++ A  IR WMG F+ IR+++K AAR+GQ FSSS +TL V + ++E+IPD+E+ S G 
Sbjct: 484  IDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGT 543

Query: 548  DYCFSDGIGKISLSFARQVADKCGVNHI-PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 607
             Y FSDGIGKIS  FAR+VA KCG+    PSAFQIRYGGYKGV+AVD NS +KLSLR SM
Sbjct: 544  RYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSM 603

Query: 608  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKA 667
             KFES+N  L+V  WS   PCY+NR+++TLLSTLGV+D  FE  Q+E +  L  +LT   
Sbjct: 604  SKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPL 663

Query: 668  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKG 727
             A   L  +   ++ NIL  ++  GY+P+ EP+LSMMLQ    +   +LR++ RI++  G
Sbjct: 664  EAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGG 723

Query: 728  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 787
            R ++GCLDET  L YGQV     +  S+     +++         I+ G VVV KNPCLH
Sbjct: 724  RSMMGCLDETRTLEYGQV----VVQYSDPMRPGRRF---------IITGPVVVAKNPCLH 783

Query: 788  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 847
            PGDVRVL+A+    L    +VDC++FPQKG RPH NECSG DLDGD+YF+ WD+ L+PP+
Sbjct: 784  PGDVRVLQAVNVPALNH--MVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPR 843

Query: 848  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 907
            T  PMDYT    +I+DHDVT+EE++++F +Y++ND+LG I+ AH   AD+EP KA S  C
Sbjct: 844  TSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPC 903

Query: 908  LELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 967
            +ELA   S AVDF KTG  A +P+ L  +E+PDFME+ DKP Y S NV+GKL+R   +  
Sbjct: 904  IELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERA 963

Query: 968  ERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEI 1027
                S   ++ + A   YD D+EVDGFE +++ A   K  Y  K+  LM+YYG + E EI
Sbjct: 964  PPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEI 1023

Query: 1028 LMGD-LRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYH 1087
            L G  +R   S+ +R +       + I   V+ LRKE    F  S         ASAWYH
Sbjct: 1024 LSGGIMRMSKSFTKRRD------AESIGRAVRALRKETLSLFNASEEEENESAKASAWYH 1083

Query: 1088 VTYHPSY---FKEDM---FYFSFPWTVSDVLLNIKAMNSKRHR 1117
            VTYH SY   + E +    + SF W V D L+ IK  N  R +
Sbjct: 1084 VTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQ 1092

BLAST of CcUC06G126770 vs. ExPASy Swiss-Prot
Match: Q0DXS3 (Probable RNA-dependent RNA polymerase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR1 PE=2 SV=2)

HSP 1 Score: 635.2 bits (1637), Expect = 1.4e-180
Identity = 346/741 (46.69%), Postives = 471/741 (63.56%), Query Frame = 0

Query: 381  SRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRT 440
            S +Y  GPE+  SN VV+NF+S   +F+R++FV+ED  KL A  ++     G      RT
Sbjct: 7    STVYFYGPEINVSNRVVRNFSSDIENFLRISFVDEDCEKLRATDLSPRSASG--HDANRT 66

Query: 441  EIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFASSDKLKAEEIRQWMGCFEKI 500
             +Y R++++L DGI IG K FEFLAFS+SQLR NS WMFAS   L A +IR WMG F  I
Sbjct: 67   ALYKRVLSVLSDGITIGGKNFEFLAFSSSQLRDNSAWMFASRQGLAASDIRTWMGDFRNI 126

Query: 501  RSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQV 560
            R+++K AAR+GQ FSSST+TL V   +VE I DI+   +G  + FSDGIGKIS +FA +V
Sbjct: 127  RNVAKYAARLGQSFSSSTETLKVQKYEVEEISDIK---NGTQHVFSDGIGKISSAFANEV 186

Query: 561  ADKCGVNHI-PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSMLKFESKNKMLNVTKWSDSM 620
            A KC +    PSAFQIRYGGYKGV+AVD  S  KLSLR SMLKF+S N  ++V  +S   
Sbjct: 187  AMKCNLKRFAPSAFQIRYGGYKGVVAVDPTSRWKLSLRKSMLKFQSDNITVDVLAYSKYQ 246

Query: 621  PCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKAVALNVLENLHGADSNNILV 680
            P +LNR+++TLLSTLGV D  FE  Q+E ++ L +M+TD   A+  +E +   +  N + 
Sbjct: 247  PGFLNRQLITLLSTLGVRDSVFEQKQEEAVNQLNKMVTDPQAAIEAIELMPMGEITNAVK 306

Query: 681  QMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKGRILLGCLDETGILNYGQVY 740
            ++L  GY+P+ EPYLSM+LQ    +   +L+++ RI +PKGR ++GCLDET  L YGQV+
Sbjct: 307  ELLLCGYQPDDEPYLSMLLQTFRASKLLELKTKSRILIPKGRAMMGCLDETRTLKYGQVF 366

Query: 741  ACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKG 800
               T   +             D  +  + GKVV+ KNPCLHPGD+R+L A+    L    
Sbjct: 367  IRATSGVN-------------DNDRFTVTGKVVIAKNPCLHPGDIRILHAVDVPVLHH-- 426

Query: 801  LVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDV 860
            + +C++FPQ+G RPH NECSG DLDGD+YF+SWD +LIPP+   PMDYT      +DHDV
Sbjct: 427  MFNCVVFPQQGPRPHPNECSGSDLDGDIYFVSWDPSLIPPRMVTPMDYTPAPTETLDHDV 486

Query: 861  TLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKCLELAALHSMAVDFAKTGAP 920
            T+EE++++F +Y++N++LG I+ AH+V AD+E  KA SS C+ELA L S+AVDF KTG P
Sbjct: 487  TIEEVEEYFTNYIVNESLGMIANAHVVFADKEDLKAESSPCIELAKLFSIAVDFPKTGVP 546

Query: 921  AEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSIERERSRLVWSEEAARAIYD 980
            A +P  L  +E+PDFME+ DK  Y S  V+GKLYR   K     +    ++ E AR  YD
Sbjct: 547  ALIPPELHVKEYPDFMEKLDKVTYESKGVIGKLYREIKKHTPHIKH---FTREVARRSYD 606

Query: 981  HDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRKY 1040
             D+ VDG+E ++  A + KD Y  K+  LM++YG + E EI+ G +   A    ++  K 
Sbjct: 607  TDMIVDGYEDYITEAMALKDEYDFKLGNLMDHYGIKSEAEIISGCILKMA----KNFTKK 666

Query: 1041 GDMKDRILLLVKHLRKEVKEWF------ENSCAPHEHKMMASAWYHVTYHPSYF------ 1100
             D  D I L V+ LRKE +  F      +N       +  ASAWYHVTYHP ++      
Sbjct: 667  SD-ADAIRLAVRSLRKEARSRFSEMSLDDNGHGHDASEAKASAWYHVTYHPEFWGCYNEG 719

Query: 1101 KEDMFYFSFPWTVSDVLLNIK 1109
             E   + SFPW + + LL IK
Sbjct: 727  YERPHFISFPWCIYEKLLRIK 719

BLAST of CcUC06G126770 vs. ExPASy Swiss-Prot
Match: Q9SG02 (RNA-dependent RNA polymerase 6 OS=Arabidopsis thaliana OX=3702 GN=RDR6 PE=1 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 2.4e-156
Identity = 385/1122 (34.31%), Postives = 586/1122 (52.23%), Query Frame = 0

Query: 56   VQFTTLEAKSKAQSLSVQNNLVFNSHNLRFS-------EINDDIVVRPVHARNRTENGVL 115
            V F   E+  +A   + Q NL+ +   L+ S        +N     R      +     L
Sbjct: 81   VHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSLNQR---RRTTVPYKLAGITL 140

Query: 116  HVGFMLKEDRMSVLESWEGVKVWIMP--------ERRRTEF----WIWHGQ-EC-YKLEV 175
             +G ++  D   V    EGV   + P         R+ T F     + H    C YKLE+
Sbjct: 141  EIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLEL 200

Query: 176  MFEEILETTGYCLGDEKLN--ALLLKLKYAPRIYKKISGSNMASRFSSTRYRLCREDYDY 235
            +  +I     Y    + L+   L+L+L  +PR++ + +  ++              D D 
Sbjct: 201  LVRDIQTVRQY----KTLHGFVLILQLASSPRVWYRTADDDIYDTVPGDLL-----DDDD 260

Query: 236  LWVRTTEFSPMRSVGQSTSF----CWEVEEDLQAA-DVFSIFPFYKETQK---DIVLEDC 295
             W+RTT+F+ + ++G+  S+        E  L+ A D F +    +E  +    I  E C
Sbjct: 261  PWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRWPPRIRNEPC 320

Query: 296  EEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQKISLAAANDELIDFLSSLDFDTAL 355
              FG          +     +++E+ + +NS++H    +     +   D L +   D  +
Sbjct: 321  --FGEPVS-DHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKDVNI 380

Query: 356  NVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPSSSQKRLSNNVMNCYRVLVTPSRIY 415
              L+ L   K   +D    LK     +++N K L S  Q   S ++    R+++TP+R Y
Sbjct: 381  ASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQ---SEDISEIRRLVITPTRAY 440

Query: 416  CLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKLPAGAVT---TSIQRGILSKPY--R 475
            CL PE+E SN V++ + + A  F+RVTF++E    + +  ++     I + + S  +  +
Sbjct: 441  CLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQK 500

Query: 476  TEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFASSDKLKAEEIRQWMGCFEK 535
            T ++ R+ +IL DG  +  +++ FLAFSA+QLR  S W FA   K +  +I+ WMG F K
Sbjct: 501  TYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKF-K 560

Query: 536  IRSISKCAARMGQLFSSSTQTLVVPTQDVEI-IPDIEVNSDGIDYCFSDGIGKISLSFAR 595
             ++++KCAARMG  FSS+  T+ V   +V+  +PDIE N     Y FSDGIG I+   A 
Sbjct: 561  DKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNG----YVFSDGIGTITPDLAD 620

Query: 596  QVAD--KCGVNHIPSAFQIRYGGYKGVIA--VDRNSFRKLSLRDSMLKFESKNKMLNVTK 655
            +V +  K  V++ P A+QIRY G+KGV+A    ++   +L+LRDSM KF SK+ +L +  
Sbjct: 621  EVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICS 680

Query: 656  WSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKAVALNVLENLHGADS 715
            W+   P +LNR+I+TLLS LGV DE F  +Q+  L+ L R+L D  VA  VL     A+ 
Sbjct: 681  WTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVL-TASCAEQ 740

Query: 716  NNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKGRILLGCLDETGILN 775
             N    ML+ G++P  EP+L  ML +        LR + RI+V  GR L+GCLDE GIL 
Sbjct: 741  GNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILE 800

Query: 776  YGQVYACITLTKSELQDRNQKYFHKIDETKS---ILLGKVVVTKNPCLHPGDVRVLEAIF 835
            +GQ +  I ++K  +++   K+  +  ETK+   ++ G V + KNPCLHPGDVR+LEA+ 
Sbjct: 801  HGQCF--IQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVD 860

Query: 836  HVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPP--KTEAPMDYTG 895
              +L    + DCLIFPQKG+RPHTNE SG DLDGDLYF++WD+ LIPP  K+   M Y  
Sbjct: 861  VPQLHH--MYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDA 920

Query: 896  RRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKCLELAALHSM 955
               + +   V  ++I  FF   + N+ LG I  AH+VHADR    A+  +CL LA L + 
Sbjct: 921  AEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAAT 980

Query: 956  AVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSIERERSRLVW 1015
            AVDF KTG    MP  LKP+ +PDFM + D   Y SN +LG+LYR  VK +  E +    
Sbjct: 981  AVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYR-RVKEVYDEDAEASS 1040

Query: 1016 SE--EAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEILMGDLRS 1075
             E  + +   YD  LE+ GFE  +  A  +K +Y  ++  L+  Y  + E+EI+ G + S
Sbjct: 1041 EESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWS 1100

Query: 1076 RASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHE----------HKMMASAW 1109
               Y    ++K G++K+R+      L+KE ++ FE +   HE          ++  ASAW
Sbjct: 1101 MPKY---TSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAW 1160

BLAST of CcUC06G126770 vs. ExPASy TrEMBL
Match: A0A1S3BVE2 (RNA-dependent RNA polymerase OS=Cucumis melo OX=3656 GN=LOC103493922 PE=3 SV=1)

HSP 1 Score: 2124.7 bits (5504), Expect = 0.0e+00
Identity = 1050/1117 (94.00%), Postives = 1080/1117 (96.69%), Query Frame = 0

Query: 1    MAQPERSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTT 60
            MAQPERSTL+VSNVPESAIAQDLL FL SKLGPDSVFAIEIFTERKNWKSRG GRVQFTT
Sbjct: 1    MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 61   LEAKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMS 120
            LEAK+KA +LSVQNNLVF + NLRFS INDDIVVRPVHA NRTENGVLHVGFMLKE+RMS
Sbjct: 61   LEAKAKAMALSVQNNLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120

Query: 121  VLESWEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180
            VLESWEGVK WIMPERRR EFWIWH QECYKLEVMFEEILETTGYCLG+EKLNALL KLK
Sbjct: 121  VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGYCLGEEKLNALLFKLK 180

Query: 181  YAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
            YAPRIYKKISGSNMAS+FSSTRYRLC EDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL
Sbjct: 181  YAPRIYKKISGSNMASKFSSTRYRLCVEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240

Query: 241  QAADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQ 300
            QA+D+FS FPFYKETQKDIVLED EEF STSEIVPLIK GLGSNLAYEV+YQLNSLVHMQ
Sbjct: 241  QASDIFSYFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ 300

Query: 301  KISLAAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPS 360
            KISLAAAN +LIDFL +LD DTALNVLQRLHQLKFICYDPLSFLKTQLHV KRNCK+LP 
Sbjct: 301  KISLAAANQDLIDFLCTLDIDTALNVLQRLHQLKFICYDPLSFLKTQLHVFKRNCKSLPL 360

Query: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKL 420
            SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNF+S+ASDFMRVTFVEEDWSKL
Sbjct: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 420

Query: 421  PAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFA 480
            PAGAVTTSIQRGILSKPYRT IYHRI+TILRDGI+IGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421  PAGAVTTSIQRGILSKPYRTNIYHRIVTILRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480

Query: 481  SSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540
            SSD LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG
Sbjct: 481  SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540

Query: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
            IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600

Query: 601  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKA 660
            LKFESKNKMLNVTK  DSMPCYLNREIVTLLSTLGV DESFEALQQEQLHLL RMLTDKA
Sbjct: 601  LKFESKNKMLNVTKCCDSMPCYLNREIVTLLSTLGVKDESFEALQQEQLHLLKRMLTDKA 660

Query: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKG 720
            VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRI+VPKG
Sbjct: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720

Query: 721  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 780
            RILLGCLDETGILNYGQVYACITLTKSELQ+RNQ YFH IDETKSIL+GKVVVTKNPCLH
Sbjct: 721  RILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKSILIGKVVVTKNPCLH 780

Query: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840
            PGDVRVLEAIFHVELEEKGLVDCLIFPQKG RPHTNECSGGDLDGDLYFISWDENLIPPK
Sbjct: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGPRPHTNECSGGDLDGDLYFISWDENLIPPK 840

Query: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900
            TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALS+KC
Sbjct: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900

Query: 901  LELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 960
            LELAALHSMAVDFAKTGAPAEMPR+LKPREFPDFMERFDKPMYIS+NVLGKLYRAA+KSI
Sbjct: 901  LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAIKSI 960

Query: 961  ERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEI 1020
            E+ERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAE+YK+MYIEKMSILMNYYGAEYEDEI
Sbjct: 961  EQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020

Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYHV 1080
            LMGDLRSRASYLQRDNRKYGDMKDRILL VK LRKEVKEWFENSC PH+ +MMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKSLRKEVKEWFENSCDPHQRRMMASAWYHV 1080

Query: 1081 TYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHRA 1118
            TYHPSYFKEDMFYFSFPW VSDVLLNIKA NSKRH+A
Sbjct: 1081 TYHPSYFKEDMFYFSFPWAVSDVLLNIKATNSKRHQA 1117

BLAST of CcUC06G126770 vs. ExPASy TrEMBL
Match: E9NWK9 (RNA-dependent RNA polymerase OS=Cucumis sativus OX=3659 GN=Csa_1G005580 PE=2 SV=1)

HSP 1 Score: 2110.1 bits (5466), Expect = 0.0e+00
Identity = 1044/1117 (93.46%), Postives = 1077/1117 (96.42%), Query Frame = 0

Query: 1    MAQPERSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTT 60
            MAQPERSTL+VSNVPESAIAQDLL FL SKLGPDSVFAIEIFTERKNWKSRG GRVQFTT
Sbjct: 1    MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 61   LEAKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMS 120
            LEAK+KA SLSVQN+LVF + NLRFS INDDIVVRPVHA NRTENGVLHVGFMLKE+RMS
Sbjct: 61   LEAKAKAMSLSVQNSLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120

Query: 121  VLESWEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180
            VLESWEGVK WIMPERRR EFWIWH QECYKLEVMFEEILETTG+CLG+EKLNALLLKLK
Sbjct: 121  VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGEEKLNALLLKLK 180

Query: 181  YAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
            YAPRIYKKISGSNMASRFSSTRYRLC EDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL
Sbjct: 181  YAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240

Query: 241  QAADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQ 300
            QA+D+FS FPFYKETQKDIVLED EEF STSEIVPLIK GLGSNLAYEV+YQLNSLVHMQ
Sbjct: 241  QASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLNSLVHMQ 300

Query: 301  KISLAAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPS 360
            KISL+AAN +LIDFL +LD DTALNVLQRLHQLKF+CYDPLSFLKTQLHV KRNCK+LP 
Sbjct: 301  KISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRNCKSLPP 360

Query: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKL 420
            SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNF+S+ASDFMRVTFVEEDWSKL
Sbjct: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVEEDWSKL 420

Query: 421  PAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFA 480
            PAGAVTTSIQRGILSKPYRTEIYHRI+T+LRDGI+IGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421  PAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSNSVWMFA 480

Query: 481  SSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540
            SSD LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT+DVEIIPDIEVN+DG
Sbjct: 481  SSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDIEVNTDG 540

Query: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
            IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600

Query: 601  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKA 660
            LKFESKNKMLNVTK  DSMPCYLNREI TLLSTLGV DESFEALQQEQLHLL RMLTDK 
Sbjct: 601  LKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKRMLTDKD 660

Query: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKG 720
            VALNVLEN HGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRI+VPKG
Sbjct: 661  VALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720

Query: 721  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 780
            RILLGCLDETGILNYGQVYACITLTKSELQ RNQ YFH IDETKSILLGKVVVTKNPCLH
Sbjct: 721  RILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSILLGKVVVTKNPCLH 780

Query: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840
            PGDVRVLEAIFHVELEEKGLVDCLIFPQKG RPHTNECSGGDLDGDLYFISWDENLIPPK
Sbjct: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPK 840

Query: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900
            TEAPMDYTGRRPRIMDHDV LEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALS+KC
Sbjct: 841  TEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKC 900

Query: 901  LELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 960
            LELAALHSMAVDFAKTGAPAEMPR+LKPREFPDFMERFDKPMYIS+NVLGKLYRAAVKSI
Sbjct: 901  LELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSI 960

Query: 961  ERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEI 1020
            E+ERSRLVWSEEAARAIYD+DLEVDGFEAFLEIAE+YK+MYIEKMSILMNYYGAEYEDEI
Sbjct: 961  EQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEI 1020

Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYHV 1080
            LMGDLRSRASYLQRDNRKYGDMKDRILL VK+LRKEVKEWFENSC P   +MMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHV 1080

Query: 1081 TYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHRA 1118
            TYHPSYFKEDMFYFSFPW VSDVLLNIKAMNSKRH+A
Sbjct: 1081 TYHPSYFKEDMFYFSFPWAVSDVLLNIKAMNSKRHQA 1117

BLAST of CcUC06G126770 vs. ExPASy TrEMBL
Match: A0A5D3BHS8 (RNA-dependent RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G001880 PE=3 SV=1)

HSP 1 Score: 2089.7 bits (5413), Expect = 0.0e+00
Identity = 1042/1132 (92.05%), Postives = 1072/1132 (94.70%), Query Frame = 0

Query: 1    MAQPERSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTT 60
            MAQPERSTL+VSNVPESAIAQDLL FL SKLGPDSVFAIEIFTERKNWKSRG GRVQFTT
Sbjct: 1    MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 61   LEAKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMS 120
            LEAK+KA +LSVQNNLVF + NLRFS INDDIVVRPVHA NRTENGVLHVGFMLKE+RMS
Sbjct: 61   LEAKAKAMALSVQNNLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120

Query: 121  VLESWEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYC---------LGDEK 180
            VLESWEGVK WIMPERRR EFWIWH QECYKLEVMFEEILETTGY           G + 
Sbjct: 121  VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGYSGMVPCFTSGFGSKD 180

Query: 181  ------LNALLLKLKYAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRS 240
                  L   L  LKYAPRIYKKISGSNMAS+FSSTRYRLC EDYDYLWVRTTEFSPMRS
Sbjct: 181  FFVTLYLVGNLSPLKYAPRIYKKISGSNMASKFSSTRYRLCVEDYDYLWVRTTEFSPMRS 240

Query: 241  VGQSTSFCWEVEEDLQAADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNL 300
            VGQSTSFCWEVEEDLQA+D+FS FPFYKETQKDIVLED EEF STSEIVPLIK GLGSNL
Sbjct: 241  VGQSTSFCWEVEEDLQASDIFSYFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNL 300

Query: 301  AYEVQYQLNSLVHMQKISLAAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLK 360
            AYEV+YQLNSLVHMQKISLAAAN +LIDFL +LD DTALNVLQRLHQLKFICYDPLSFLK
Sbjct: 301  AYEVEYQLNSLVHMQKISLAAANQDLIDFLCTLDIDTALNVLQRLHQLKFICYDPLSFLK 360

Query: 361  TQLHVLKRNCKNLPSSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHAS 420
            TQLHV KRNCK+LP SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNF+S+AS
Sbjct: 361  TQLHVFKRNCKSLPLSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYAS 420

Query: 421  DFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLA 480
            DFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRT IYHRI+TILRDGI+IGAKRFEFLA
Sbjct: 421  DFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTNIYHRIVTILRDGIVIGAKRFEFLA 480

Query: 481  FSASQLRSNSVWMFASSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT 540
            FSASQLRSNSVWMFASSD LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT
Sbjct: 481  FSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT 540

Query: 541  QDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIA 600
            QDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIA
Sbjct: 541  QDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIA 600

Query: 601  VDRNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQ 660
            VDRNSFRKLSLRDSMLKFESKNKMLNVTK  DSMPCYLNREIVTLLSTLGV DESFEALQ
Sbjct: 601  VDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIVTLLSTLGVKDESFEALQ 660

Query: 661  QEQLHLLGRMLTDKAVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNL 720
            QEQLHLL RMLTDKAVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNL
Sbjct: 661  QEQLHLLKRMLTDKAVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNL 720

Query: 721  FSDLRSRCRIYVPKGRILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKS 780
            FSDLRSRCRI+VPKGRILLGCLDETGILNYGQVYACITLTKSELQ+RNQ YFH IDETKS
Sbjct: 721  FSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKS 780

Query: 781  ILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDG 840
            IL+GKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKG RPHTNECSGGDLDG
Sbjct: 781  ILIGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGPRPHTNECSGGDLDG 840

Query: 841  DLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHL 900
            DLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHL
Sbjct: 841  DLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHL 900

Query: 901  VHADREPKKALSSKCLELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYIS 960
            VHADREPKKALS+KCLELAALHSMAVDFAKTGAPAEMPR+LKPREFPDFMERFDKPMYIS
Sbjct: 901  VHADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYIS 960

Query: 961  NNVLGKLYRAAVKSIERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKM 1020
            +NVLGKLYRAA+KSIE+ERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAE+YK+MYIEKM
Sbjct: 961  SNVLGKLYRAAIKSIEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKM 1020

Query: 1021 SILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSC 1080
            SILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILL VK LRKEVKEWFENSC
Sbjct: 1021 SILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKSLRKEVKEWFENSC 1080

Query: 1081 APHEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHRA 1118
             PH+ +MMASAWYHVTYHPSYFKEDMFYFSFPW VSDVLLNIKA NSKRH+A
Sbjct: 1081 DPHQRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKATNSKRHQA 1132

BLAST of CcUC06G126770 vs. ExPASy TrEMBL
Match: A0A5A7UPU2 (RNA-dependent RNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G001800 PE=3 SV=1)

HSP 1 Score: 2087.4 bits (5407), Expect = 0.0e+00
Identity = 1041/1132 (91.96%), Postives = 1071/1132 (94.61%), Query Frame = 0

Query: 1    MAQPERSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTT 60
            MAQPERSTL+VSNVPESAIAQDLL FL SKLGPDSVFAIEIFTERKNWKSRG GRVQFTT
Sbjct: 1    MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 61   LEAKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMS 120
            LEAK+KA +LSVQNNLVF + NLRFS INDDIVVRPVHA NRTENGVLHVGFMLKE+RMS
Sbjct: 61   LEAKAKAMALSVQNNLVFGTQNLRFSLINDDIVVRPVHATNRTENGVLHVGFMLKEERMS 120

Query: 121  VLESWEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYC---------LGDEK 180
            VLESWEGVK WIMPERRR EFWIWH QECYKLEVMFEEILETTGY           G + 
Sbjct: 121  VLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGYSGMVPCFTSGFGSKD 180

Query: 181  ------LNALLLKLKYAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRS 240
                  L   L  LKYAPRIYKKISGSNMAS+FSSTRYRLC EDYDYLWVRTTEFSPMRS
Sbjct: 181  FFVTLYLVGNLSPLKYAPRIYKKISGSNMASKFSSTRYRLCVEDYDYLWVRTTEFSPMRS 240

Query: 241  VGQSTSFCWEVEEDLQAADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNL 300
            VGQSTSFCWEVEEDLQA+D+FS FPFYKETQKDIVLED EEF STSEIVPLIK GLGSNL
Sbjct: 241  VGQSTSFCWEVEEDLQASDIFSYFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNL 300

Query: 301  AYEVQYQLNSLVHMQKISLAAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLK 360
            AYEV+YQLNSLVHMQKISLAAAN +LIDFL +LD DTALNVLQRLHQLKFICYDPLSFLK
Sbjct: 301  AYEVEYQLNSLVHMQKISLAAANQDLIDFLCTLDIDTALNVLQRLHQLKFICYDPLSFLK 360

Query: 361  TQLHVLKRNCKNLPSSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHAS 420
            TQLHV KRNCK+LP SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNF+S+AS
Sbjct: 361  TQLHVFKRNCKSLPLSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYAS 420

Query: 421  DFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLA 480
            DFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRT IYHRI+TILRDGI+IGAKRFEFLA
Sbjct: 421  DFMRVTFVEEDWSKLPAGAVTTSIQRGILSKPYRTNIYHRIVTILRDGIVIGAKRFEFLA 480

Query: 481  FSASQLRSNSVWMFASSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT 540
            FSASQLRSNSVWMFASSD LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT
Sbjct: 481  FSASQLRSNSVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPT 540

Query: 541  QDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIA 600
            QDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIA
Sbjct: 541  QDVEIIPDIEVNSDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIA 600

Query: 601  VDRNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQ 660
            VDRNSFRKLSLRDSMLKFESKNKMLNVTK  DSMPCYLNREIVTLLSTLGV DESFEALQ
Sbjct: 601  VDRNSFRKLSLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIVTLLSTLGVKDESFEALQ 660

Query: 661  QEQLHLLGRMLTDKAVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNL 720
            QEQLHLL RMLTDKAVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNL
Sbjct: 661  QEQLHLLKRMLTDKAVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNL 720

Query: 721  FSDLRSRCRIYVPKGRILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKS 780
            FSDLRSRCRI+VPKGRILLGCLDETGILNYGQVYACITLTKSELQ+RNQ YFH IDETKS
Sbjct: 721  FSDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQNRNQNYFHTIDETKS 780

Query: 781  ILLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDG 840
            IL+GKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKG RPHTNECSGGDLDG
Sbjct: 781  ILIGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGPRPHTNECSGGDLDG 840

Query: 841  DLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHL 900
            DLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHL
Sbjct: 841  DLYFISWDENLIPPKTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHL 900

Query: 901  VHADREPKKALSSKCLELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYIS 960
            VHADREPKKALS+KCLELAALHSMAVDFAKTGAPAEMPR+LKPREFPDFMERFDKPMYIS
Sbjct: 901  VHADREPKKALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYIS 960

Query: 961  NNVLGKLYRAAVKSIERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKM 1020
            +NVLGKLYRAA+KSIE+ERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAE+YK+MYIEKM
Sbjct: 961  SNVLGKLYRAAIKSIEQERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAETYKEMYIEKM 1020

Query: 1021 SILMNYYGAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSC 1080
            SILMNYY AEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILL VK LRKEVKEWFENSC
Sbjct: 1021 SILMNYYSAEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKSLRKEVKEWFENSC 1080

Query: 1081 APHEHKMMASAWYHVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHRA 1118
             PH+ +MMASAWYHVTYHPSYFKEDMFYFSFPW VSDVLLNIKA NSKRH+A
Sbjct: 1081 DPHQRRMMASAWYHVTYHPSYFKEDMFYFSFPWAVSDVLLNIKATNSKRHQA 1132

BLAST of CcUC06G126770 vs. ExPASy TrEMBL
Match: A0A6J1E171 (RNA-dependent RNA polymerase OS=Cucurbita moschata OX=3662 GN=LOC111429858 PE=3 SV=1)

HSP 1 Score: 2087.4 bits (5407), Expect = 0.0e+00
Identity = 1028/1117 (92.03%), Postives = 1071/1117 (95.88%), Query Frame = 0

Query: 1    MAQPERSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTT 60
            M QPERSTL+VSNVPESA+A+DLLTFL SKLGPDSVFAIEIFTERKNWKSRG GRVQFTT
Sbjct: 1    MGQPERSTLRVSNVPESAVAEDLLTFLKSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 61   LEAKSKAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMS 120
            LEAKSKAQSLSVQNNLVF++HNLRFSE NDDI+VRP+H RNRTENGVLHVGFMLKED MS
Sbjct: 61   LEAKSKAQSLSVQNNLVFSTHNLRFSETNDDIIVRPIHGRNRTENGVLHVGFMLKEDHMS 120

Query: 121  VLESWEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180
            VLESWEGVK WIMPERRR EFWIW   ECYKLEVMFEEILETTGYCLGDEKLNALLLKLK
Sbjct: 121  VLESWEGVKAWIMPERRRVEFWIWREDECYKLEVMFEEILETTGYCLGDEKLNALLLKLK 180

Query: 181  YAPRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDL 240
            YAPRIYKKISGSNMA +FSS+RYRLC+E++DYLW+RTTEFS +RS+GQSTSFCWEVEEDL
Sbjct: 181  YAPRIYKKISGSNMAYKFSSSRYRLCKEEHDYLWIRTTEFSSLRSIGQSTSFCWEVEEDL 240

Query: 241  QAADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQ 300
            QA+D+FS FP Y+ET KDI LED  EFGSTSE VPLIK GL SNLAYEVQYQLNSLVHMQ
Sbjct: 241  QASDMFSSFPLYRETPKDITLEDGGEFGSTSEAVPLIKSGLVSNLAYEVQYQLNSLVHMQ 300

Query: 301  KISLAAANDELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPS 360
            KISLAAA+++LIDFLS+L  DTALN+LQRLHQLKFICYDPLSFLKTQLHVLKRNCK LPS
Sbjct: 301  KISLAAASNDLIDFLSTLGTDTALNILQRLHQLKFICYDPLSFLKTQLHVLKRNCKVLPS 360

Query: 361  SSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKL 420
             SQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFAS+ASDFMRVTFVEEDWSKL
Sbjct: 361  LSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASYASDFMRVTFVEEDWSKL 420

Query: 421  PAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFA 480
            PAGAVTTSIQRG+LSKPYRTEIYHRI++ILR+GI+IGAKRFEFLAFSASQLRSNSVWMFA
Sbjct: 421  PAGAVTTSIQRGLLSKPYRTEIYHRIVSILRNGIVIGAKRFEFLAFSASQLRSNSVWMFA 480

Query: 481  SSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540
            SS+ LKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG
Sbjct: 481  SSNNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDG 540

Query: 541  IDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600
            IDYCFSDGIGKISLSFARQVADKCG+ HIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM
Sbjct: 541  IDYCFSDGIGKISLSFARQVADKCGLTHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 600

Query: 601  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKA 660
            LKFESKNKMLNVTK SDSMPCYLNREIVTLLSTLGV DESFEALQQEQLHLL RMLTDK 
Sbjct: 601  LKFESKNKMLNVTKCSDSMPCYLNREIVTLLSTLGVKDESFEALQQEQLHLLRRMLTDKV 660

Query: 661  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKG 720
             ALNVLENL+GADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRI+VPKG
Sbjct: 661  AALNVLENLNGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIFVPKG 720

Query: 721  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 780
            RILLGCLDETGILNYGQVYACITLTKSEL+DRNQ YFHKIDETKSILLGKVVVTKNPCLH
Sbjct: 721  RILLGCLDETGILNYGQVYACITLTKSELRDRNQNYFHKIDETKSILLGKVVVTKNPCLH 780

Query: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840
            PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK
Sbjct: 781  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 840

Query: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900
            TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC
Sbjct: 841  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 900

Query: 901  LELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 960
            LELAALHSMAVD+AKTGAPAEMPR+LKPREFPDFMERFDKPMY SNNVLGKLYRAAVK++
Sbjct: 901  LELAALHSMAVDYAKTGAPAEMPRVLKPREFPDFMERFDKPMYKSNNVLGKLYRAAVKTM 960

Query: 961  ERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEI 1020
            E+ERSRLVW+EE A AIYDHDLEVDGFEAFLE AES+K MYIEKMSILMNYYGAEYEDEI
Sbjct: 961  EQERSRLVWTEETATAIYDHDLEVDGFEAFLETAESFKVMYIEKMSILMNYYGAEYEDEI 1020

Query: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYHV 1080
            LMGDLRSRASYLQRDNRKYGDMKDRILL VK +RKE KEWFENSCAPHEHKMMASAWYHV
Sbjct: 1021 LMGDLRSRASYLQRDNRKYGDMKDRILLSVKCVRKEAKEWFENSCAPHEHKMMASAWYHV 1080

Query: 1081 TYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKRHRA 1118
            TYHPSYFK+DMFYFSFPW V DVLLNIKAMNSKR  A
Sbjct: 1081 TYHPSYFKQDMFYFSFPWIVHDVLLNIKAMNSKRREA 1117

BLAST of CcUC06G126770 vs. TAIR 10
Match: AT4G11130.1 (RNA-dependent RNA polymerase 2 )

HSP 1 Score: 1404.4 bits (3634), Expect = 0.0e+00
Identity = 689/1116 (61.74%), Postives = 864/1116 (77.42%), Query Frame = 0

Query: 6    RSTLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTTLEAKS 65
            RST+K+SNVP++ +A +LL FL   LG D+VFA+EI T R NWK R F RVQFTTLE KS
Sbjct: 9    RSTVKISNVPQTIVADELLRFLELHLGEDTVFALEIPTTRDNWKPRDFARVQFTTLEVKS 68

Query: 66   KAQSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGF-MLKEDRMSVLES 125
            +AQ LS Q+ L+F +HNLR SE  DDI+ RPV  R R ++ VL VGF    E R   LE 
Sbjct: 69   RAQLLSSQSKLLFKTHNLRLSEAYDDIIPRPVDPRKRLDDIVLTVGFPESDEKRFCALEK 128

Query: 126  WEGVKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCL-GD-EKLNALLLKLKYA 185
            W+GV+ WI+ E+RR EFW+W   +CYK+EV FE+I+ET   C+ GD  +++A LLKLKY 
Sbjct: 129  WDGVRCWILTEKRRVEFWVWESGDCYKIEVRFEDIIETLSCCVNGDASEIDAFLLKLKYG 188

Query: 186  PRIYKKISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQA 245
            P+++K+++  ++A++F S RYR C+ED+D++W+RTT+FS  +S+G ST FC EV      
Sbjct: 189  PKVFKRVT-VHIATKFKSDRYRFCKEDFDFMWIRTTDFSGSKSIGTSTCFCLEVHNGSTM 248

Query: 246  ADVFSIFPFYKETQKDIVLEDCEEFGSTSEIVPLIKVG-LGSNLAYEVQYQLNSLVHMQK 305
             D+FS  P+Y+E    +   D + F S ++IVPL+    LG    YE+ +QLN+LVH QK
Sbjct: 249  LDIFSGLPYYREDTLSLTYVDGKTFASAAQIVPLLNAAILGLEFPYEILFQLNALVHAQK 308

Query: 306  ISLAAAND-ELIDFLSSLDFDTALNVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPS 365
            ISL AA+D ELI  L  +  +TAL +L++LHQ   ICYDP+ F+KTQ+  + +  K+ P+
Sbjct: 309  ISLFAASDMELIKILRGMSLETALVILKKLHQQSSICYDPVFFVKTQMQSVVKKMKHSPA 368

Query: 366  SSQKRLS-NNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSK 425
            S+ KRL+  N+M+C R  VTPS+IY LGPELET+NYVVKNFA H SDFMRVTFVEEDWSK
Sbjct: 369  SAYKRLTEQNIMSCQRAYVTPSKIYLLGPELETANYVVKNFAEHVSDFMRVTFVEEDWSK 428

Query: 426  LPAGAVTTSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMF 485
            LPA A++ + + G   KP RT IY+R+++IL +GI +G KRFEFLAFSASQLR NSVWMF
Sbjct: 429  LPANALSVNSKEGYFVKPSRTNIYNRVLSILGEGITVGPKRFEFLAFSASQLRGNSVWMF 488

Query: 486  ASSDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSD 545
            AS++K+KAE+IR+WMGCF KIRSISKCAARMGQLFS+S QTL+V  QDVE IPDIEV +D
Sbjct: 489  ASNEKVKAEDIREWMGCFRKIRSISKCAARMGQLFSASRQTLIVRAQDVEQIPDIEVTTD 548

Query: 546  GIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKLSLRDS 605
            G DYCFSDGIGKISL+FA+QVA KCG++H+PSAFQIRYGGYKGVIAVDR+SFRKLSLRDS
Sbjct: 549  GADYCFSDGIGKISLAFAKQVAQKCGLSHVPSAFQIRYGGYKGVIAVDRSSFRKLSLRDS 608

Query: 606  MLKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDK 665
            MLKF+S N+MLNVT+W++SMPC+LNREI+ LLSTLG+ D  FEA+Q   L +LG ML D+
Sbjct: 609  MLKFDSNNRMLNVTRWTESMPCFLNREIICLLSTLGIEDAMFEAMQAVHLSMLGNMLEDR 668

Query: 666  AVALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPK 725
              ALNVL+ L G +S N+LV+ML  GY P+ EPYLSMML+ H+ +  S+L+SRCRI VPK
Sbjct: 669  DAALNVLQKLSGENSKNLLVKMLLQGYAPSSEPYLSMMLRVHHESQLSELKSRCRILVPK 728

Query: 726  GRILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCL 785
            GRIL+GC+DE GIL YGQVY  +TLTK+EL+ R+Q YF KIDE  S+++GKVVVTKNPCL
Sbjct: 729  GRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEETSVVIGKVVVTKNPCL 788

Query: 786  HPGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPP 845
            HPGD+RVL+AI+ V  EEKG +DC+IFPQKGERPH NECSGGDLDGD +F+SWDE +IP 
Sbjct: 789  HPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLDGDQFFVSWDEKIIPS 848

Query: 846  KTEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSK 905
            + + PMDY G RPR+MDHDVTLEEI KFFVDYMI+DTLG ISTAHLVHADR+P+KA S K
Sbjct: 849  EMDPPMDYAGSRPRLMDHDVTLEEIHKFFVDYMISDTLGVISTAHLVHADRDPEKARSQK 908

Query: 906  CLELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKS 965
            CLELA LHS AVDFAKTGAPAEMP  LKPREFPDF+ERF+KP YIS +V GKLYRA   S
Sbjct: 909  CLELANLHSRAVDFAKTGAPAEMPYALKPREFPDFLERFEKPTYISESVFGKLYRAVKSS 968

Query: 966  IERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDE 1025
            + + +     +E      YD  LE  GFE+F+E A++++DMY EK++ LM YYGA  E+E
Sbjct: 969  LAQRKPE---AESEDTVAYDVTLEEAGFESFIETAKAHRDMYGEKLTSLMIYYGAANEEE 1028

Query: 1026 ILMGDLRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEH-KMMASAWY 1085
            IL G L+++  YL RDNR+YGDMKDRI L VK L KE   WFE SC   +  K +ASAWY
Sbjct: 1029 ILTGILKTKEMYLARDNRRYGDMKDRITLSVKDLHKEAMGWFEKSCEDEQQKKKLASAWY 1088

Query: 1086 HVTYHPSYFKEDMFYFSFPWTVSDVLLNIKAMNSKR 1115
            +VTY+P++  E + + SFPW V DVLL+IKA N++R
Sbjct: 1089 YVTYNPNHRDEKLTFLSFPWIVGDVLLDIKAENAQR 1120

BLAST of CcUC06G126770 vs. TAIR 10
Match: AT1G14790.1 (RNA-dependent RNA polymerase 1 )

HSP 1 Score: 756.5 bits (1952), Expect = 3.0e-218
Identity = 451/1123 (40.16%), Postives = 656/1123 (58.41%), Query Frame = 0

Query: 8    TLKVSNVPESAIAQDLLTFLTSKLGPDSVFAIEIFTERKNWKSRGFGRVQFTTLEAKSKA 67
            T++V   P    A+++  FL    G  +V+AI++  + K    R +  VQFT+ E  ++ 
Sbjct: 4    TIQVFGFPNGVSAEEVKKFLERLTGSGTVYAIKV-RQPKKGGPRVYAIVQFTS-ERHTRL 63

Query: 68   QSLSVQNNLVFNSHNLRFSEINDDIVVRPVHARNRTENGVLHVGFMLKEDRMSVLESWEG 127
               +    L +    L+  E+  DIV +P  + +      +  G  +   +   L S + 
Sbjct: 64   IITAAAERLYYGRSYLKAFEVEQDIVPKPRASLHTISGLKMFFGCQVSTKKFLTLWSAQD 123

Query: 128  VKVWIMPERRRTEFWIWHGQECYKLEVMFEEILETTGYCLGDEKLNALLLKLKYAPRIYK 187
            V V      R+  F     Q+ Y+LE+ +E I +   +         L++++  AP+I++
Sbjct: 124  VCVSFGIGMRKLHFSFSWYQKDYRLELSYENIWQIDLHSPQGRSSKFLVIQVIGAPKIFE 183

Query: 188  KISGSNMASRFSSTRYRLCREDYDYLWVRTTEFSPMRSVGQSTSFCWEVEEDLQAADVFS 247
            K    +              +  D  W+RTT+F+    +GQST+FC E+   L   D   
Sbjct: 184  K---EDQPINLLFGIMDFYSDGSDEQWIRTTDFTSSSCIGQSTAFCLELPVHLNVPDFRE 243

Query: 248  IFPFYKETQ-KDIVLEDCEEFGSTSE-IVPLIKVGLGSNLAYEVQYQLNSLVHMQKISLA 307
             F  Y E +    ++E    + S +  +VP++    G +L +E+ ++LN+LV    +S  
Sbjct: 244  NFANYAEHRASSFLIESGSSYSSNANTLVPVVDPPPGFSLPFEILFKLNTLVQNACLSGP 303

Query: 308  AANDELIDFLSSLDFDTAL--NVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPSSSQ 367
            A + +    L+   +D AL  + L++L  L   CY+P  +L+ +        K LP S  
Sbjct: 304  ALDLDFYRLLNQKKYDRALIDHCLEKLFHLGECCYEPAHWLRDEYKKWISKGK-LPLSPT 363

Query: 368  KRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKLPAG 427
              L + ++  YRV VTP+R+Y  GPE+  SN V+++++ + ++F+RV+FV+ED  K+ + 
Sbjct: 364  ISLDDGLVYMYRVQVTPARVYFSGPEVNVSNRVLRHYSKYINNFLRVSFVDEDLEKVRSM 423

Query: 428  AVT--TSIQRGILSKPYRTEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFAS 487
             ++  +S QR       RT++Y RI ++LRDGI+IG K+FEFLAFS+SQLR NS WMFA 
Sbjct: 424  DLSPRSSTQR-------RTKLYDRIYSVLRDGIVIGDKKFEFLAFSSSQLRENSAWMFAP 483

Query: 488  SDKLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTQDVEIIPDIEVNSDGI 547
             D++ A  IR WMG F+ IR+++K AAR+GQ FSSS +TL V + ++E+IPD+E+ S G 
Sbjct: 484  IDRITAAHIRAWMGDFDHIRNVAKYAARLGQSFSSSRETLNVRSDEIEVIPDVEIISLGT 543

Query: 548  DYCFSDGIGKISLSFARQVADKCGVNHI-PSAFQIRYGGYKGVIAVDRNSFRKLSLRDSM 607
             Y FSDGIGKIS  FAR+VA KCG+    PSAFQIRYGGYKGV+AVD NS +KLSLR SM
Sbjct: 544  RYVFSDGIGKISAEFARKVARKCGLTEFSPSAFQIRYGGYKGVVAVDPNSSKKLSLRKSM 603

Query: 608  LKFESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKA 667
             KFES+N  L+V  WS   PCY+NR+++TLLSTLGV+D  FE  Q+E +  L  +LT   
Sbjct: 604  SKFESENTKLDVLAWSKYQPCYMNRQLITLLSTLGVTDSVFEKKQREVVDRLDAILTHPL 663

Query: 668  VALNVLENLHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKG 727
             A   L  +   ++ NIL  ++  GY+P+ EP+LSMMLQ    +   +LR++ RI++  G
Sbjct: 664  EAHEALGLMAPGENTNILKALILCGYKPDAEPFLSMMLQNFRASKLLELRTKTRIFISGG 723

Query: 728  RILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLH 787
            R ++GCLDET  L YGQV     +  S+     +++         I+ G VVV KNPCLH
Sbjct: 724  RSMMGCLDETRTLEYGQV----VVQYSDPMRPGRRF---------IITGPVVVAKNPCLH 783

Query: 788  PGDVRVLEAIFHVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPPK 847
            PGDVRVL+A+    L    +VDC++FPQKG RPH NECSG DLDGD+YF+ WD+ L+PP+
Sbjct: 784  PGDVRVLQAVNVPALNH--MVDCVVFPQKGLRPHPNECSGSDLDGDIYFVCWDQELVPPR 843

Query: 848  TEAPMDYTGRRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKC 907
            T  PMDYT    +I+DHDVT+EE++++F +Y++ND+LG I+ AH   AD+EP KA S  C
Sbjct: 844  TSEPMDYTPEPTQILDHDVTIEEVEEYFANYIVNDSLGIIANAHTAFADKEPLKAFSDPC 903

Query: 908  LELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSI 967
            +ELA   S AVDF KTG  A +P+ L  +E+PDFME+ DKP Y S NV+GKL+R   +  
Sbjct: 904  IELAKKFSTAVDFPKTGVAAVIPQHLYVKEYPDFMEKPDKPTYESKNVIGKLFREVKERA 963

Query: 968  ERERSRLVWSEEAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEI 1027
                S   ++ + A   YD D+EVDGFE +++ A   K  Y  K+  LM+YYG + E EI
Sbjct: 964  PPLISIKSFTLDVASKSYDKDMEVDGFEEYVDEAFYQKANYDFKLGNLMDYYGIKTEAEI 1023

Query: 1028 LMGD-LRSRASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHEHKMMASAWYH 1087
            L G  +R   S+ +R +       + I   V+ LRKE    F  S         ASAWYH
Sbjct: 1024 LSGGIMRMSKSFTKRRD------AESIGRAVRALRKETLSLFNASEEEENESAKASAWYH 1083

Query: 1088 VTYHPSY---FKEDM---FYFSFPWTVSDVLLNIKAMNSKRHR 1117
            VTYH SY   + E +    + SF W V D L+ IK  N  R +
Sbjct: 1084 VTYHSSYWGLYNEGLNRDHFLSFAWCVYDKLVRIKKTNLGRRQ 1092

BLAST of CcUC06G126770 vs. TAIR 10
Match: AT3G49500.1 (RNA-dependent RNA polymerase 6 )

HSP 1 Score: 554.7 bits (1428), Expect = 1.7e-157
Identity = 385/1122 (34.31%), Postives = 586/1122 (52.23%), Query Frame = 0

Query: 56   VQFTTLEAKSKAQSLSVQNNLVFNSHNLRFS-------EINDDIVVRPVHARNRTENGVL 115
            V F   E+  +A   + Q NL+ +   L+ S        +N     R      +     L
Sbjct: 81   VHFAVFESAGRAMDAAGQCNLILDGQPLKVSLGPKNPYSLNQR---RRTTVPYKLAGITL 140

Query: 116  HVGFMLKEDRMSVLESWEGVKVWIMP--------ERRRTEF----WIWHGQ-EC-YKLEV 175
             +G ++  D   V    EGV   + P         R+ T F     + H    C YKLE+
Sbjct: 141  EIGTLVSRDDFFVSWRAEGVDFLVDPFDNTCKFCFRKSTAFSFKDAVMHAVINCDYKLEL 200

Query: 176  MFEEILETTGYCLGDEKLN--ALLLKLKYAPRIYKKISGSNMASRFSSTRYRLCREDYDY 235
            +  +I     Y    + L+   L+L+L  +PR++ + +  ++              D D 
Sbjct: 201  LVRDIQTVRQY----KTLHGFVLILQLASSPRVWYRTADDDIYDTVPGDLL-----DDDD 260

Query: 236  LWVRTTEFSPMRSVGQSTSF----CWEVEEDLQAA-DVFSIFPFYKETQK---DIVLEDC 295
             W+RTT+F+ + ++G+  S+        E  L+ A D F +    +E  +    I  E C
Sbjct: 261  PWIRTTDFTQVGAIGRCHSYRVLISPRYENKLRTALDYFRMRRVQEERVRWPPRIRNEPC 320

Query: 296  EEFGSTSEIVPLIKVGLGSNLAYEVQYQLNSLVHMQKISLAAANDELIDFLSSLDFDTAL 355
              FG          +     +++E+ + +NS++H    +     +   D L +   D  +
Sbjct: 321  --FGEPVS-DHFFCIHHKEGISFEIMFLVNSVLHRGVFNQFQLTERFFDLLRNQPKDVNI 380

Query: 356  NVLQRLHQLKFICYDPLSFLKTQLHVLKRNCKNLPSSSQKRLSNNVMNCYRVLVTPSRIY 415
              L+ L   K   +D    LK     +++N K L S  Q   S ++    R+++TP+R Y
Sbjct: 381  ASLKHLCTYKRPVFDAYKRLKLVQEWIQKNPKLLGSHEQ---SEDISEIRRLVITPTRAY 440

Query: 416  CLGPELETSNYVVKNFASHASDFMRVTFVEEDWSKLPAGAVT---TSIQRGILSKPY--R 475
            CL PE+E SN V++ + + A  F+RVTF++E    + +  ++     I + + S  +  +
Sbjct: 441  CLPPEVELSNRVLRRYKAVAERFLRVTFMDESMQTINSNVLSYFVAPIVKDLTSSSFSQK 500

Query: 476  TEIYHRIITILRDGIIIGAKRFEFLAFSASQLRSNSVWMFASSDKLKAEEIRQWMGCFEK 535
            T ++ R+ +IL DG  +  +++ FLAFSA+QLR  S W FA   K +  +I+ WMG F K
Sbjct: 501  TYVFKRVKSILTDGFKLCGRKYSFLAFSANQLRDRSAWFFAEDGKTRVSDIKTWMGKF-K 560

Query: 536  IRSISKCAARMGQLFSSSTQTLVVPTQDVEI-IPDIEVNSDGIDYCFSDGIGKISLSFAR 595
             ++++KCAARMG  FSS+  T+ V   +V+  +PDIE N     Y FSDGIG I+   A 
Sbjct: 561  DKNVAKCAARMGLCFSSTYATVDVMPHEVDTEVPDIERNG----YVFSDGIGTITPDLAD 620

Query: 596  QVAD--KCGVNHIPSAFQIRYGGYKGVIA--VDRNSFRKLSLRDSMLKFESKNKMLNVTK 655
            +V +  K  V++ P A+QIRY G+KGV+A    ++   +L+LRDSM KF SK+ +L +  
Sbjct: 621  EVMEKLKLDVHYSPCAYQIRYAGFKGVVARWPSKSDGIRLALRDSMKKFFSKHTILEICS 680

Query: 656  WSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKAVALNVLENLHGADS 715
            W+   P +LNR+I+TLLS LGV DE F  +Q+  L+ L R+L D  VA  VL     A+ 
Sbjct: 681  WTRFQPGFLNRQIITLLSVLGVPDEIFWDMQESMLYKLNRILDDTDVAFEVL-TASCAEQ 740

Query: 716  NNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKGRILLGCLDETGILN 775
             N    ML+ G++P  EP+L  ML +        LR + RI+V  GR L+GCLDE GIL 
Sbjct: 741  GNTAAIMLSAGFKPKTEPHLRGMLSSVRIAQLWGLREKSRIFVTSGRWLMGCLDEAGILE 800

Query: 776  YGQVYACITLTKSELQDRNQKYFHKIDETKS---ILLGKVVVTKNPCLHPGDVRVLEAIF 835
            +GQ +  I ++K  +++   K+  +  ETK+   ++ G V + KNPCLHPGDVR+LEA+ 
Sbjct: 801  HGQCF--IQVSKPSIENCFSKHGSRFKETKTDLEVVKGYVAIAKNPCLHPGDVRILEAVD 860

Query: 836  HVELEEKGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWDENLIPP--KTEAPMDYTG 895
              +L    + DCLIFPQKG+RPHTNE SG DLDGDLYF++WD+ LIPP  K+   M Y  
Sbjct: 861  VPQLHH--MYDCLIFPQKGDRPHTNEASGSDLDGDLYFVAWDQKLIPPNRKSYPAMHYDA 920

Query: 896  RRPRIMDHDVTLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSSKCLELAALHSM 955
               + +   V  ++I  FF   + N+ LG I  AH+VHADR    A+  +CL LA L + 
Sbjct: 921  AEEKSLGRAVNHQDIIDFFARNLANEQLGTICNAHVVHADRSEYGAMDEECLLLAELAAT 980

Query: 956  AVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLYRAAVKSIERERSRLVW 1015
            AVDF KTG    MP  LKP+ +PDFM + D   Y SN +LG+LYR  VK +  E +    
Sbjct: 981  AVDFPKTGKIVSMPFHLKPKLYPDFMGKEDYQTYKSNKILGRLYR-RVKEVYDEDAEASS 1040

Query: 1016 SE--EAARAIYDHDLEVDGFEAFLEIAESYKDMYIEKMSILMNYYGAEYEDEILMGDLRS 1075
             E  + +   YD  LE+ GFE  +  A  +K +Y  ++  L+  Y  + E+EI+ G + S
Sbjct: 1041 EESTDPSAIPYDAVLEIPGFEDLIPEAWGHKCLYDGQLIGLLGQYKVQKEEEIVTGHIWS 1100

Query: 1076 RASYLQRDNRKYGDMKDRILLLVKHLRKEVKEWFENSCAPHE----------HKMMASAW 1109
               Y    ++K G++K+R+      L+KE ++ FE +   HE          ++  ASAW
Sbjct: 1101 MPKY---TSKKQGELKERLKHSYNSLKKEFRKVFEETIPDHENLSEEEKNILYEKKASAW 1160

BLAST of CcUC06G126770 vs. TAIR 10
Match: AT2G19930.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.0e-29
Identity = 120/418 (28.71%), Postives = 192/418 (45.93%), Query Frame = 0

Query: 573 FQIRYGGY--KGVIAVD----------RNSFRKLSLRDSMLKFESKNKMLNVTKWSDSMP 632
           F++ Y GY  KG   ++          R S  K+S   S+  F + N +  VT  +    
Sbjct: 442 FRMFYDGYAVKGTFLLNKKLCPRTVQVRPSMIKVSKDPSLSNFSTFNALEVVTTSNPPKR 501

Query: 633 CYLNREIVTLLSTLGVSDESFEALQQEQLHLLGRMLTDKAVALNVLENLHGADSNNILVQ 692
             L++ +V LLS  G+ +E F  +    L     +  +K  ALN   N    D  N   Q
Sbjct: 502 TKLSKNLVALLSYGGIPNEFFLDILLNTLEESKSIFYNKRAALNAALNYGEMDDQN-AAQ 561

Query: 693 MLNHGY---EPNIEPYLSMMLQAHYWNLFSDLRSRCRIYVPKGRILLGCLDETGILNYGQ 752
           M+  G    EP+++ YLS++L+       +DL++  ++ V +   L+G +D TG L   +
Sbjct: 562 MILVGIPLDEPHLKNYLSILLKTEK----NDLKAG-KLPVTESYYLMGTVDPTGALKEDE 621

Query: 753 VYACITLTKSELQDRNQKYFHKIDETKSILLGKVVVTKNPCLHPGDVRVLEAIFHVELEE 812
           V  C+ L   ++                   G+V+V +NP LH GD+ +L+A +   LEE
Sbjct: 622 V--CVILESGQIS------------------GEVLVYRNPGLHFGDIHILKATYVKALEE 681

Query: 813 --KGLVDCLIFPQKGERPHTNECSGGDLDGDLYFISWD----ENLIPPK-----TEAPMD 872
                   + FPQKG R   +E +GGD DGD+YFIS +    EN  P +     T     
Sbjct: 682 YVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPELLENFKPSEPWVSLTPPSKS 741

Query: 873 YTGRRPRIMDHDVTLEEIQKFFV--DYMINDTLGAISTAHLVHADR---------EPKKA 932
            +GR P  +  +   EE+ + F+   +  ++ +G  + + L   DR         E K  
Sbjct: 742 NSGRAPSQLSPEELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAE 801

Query: 933 LSSKCLELAALHSMAVDFAKTGAPAEMPRILKPREFPDFMERFDKPMYISNNVLGKLY 954
           +  K LEL  ++  A+D  K G    +P  LKP  FP +MER  K  + S ++LG ++
Sbjct: 802 MKKKMLELIDIYYDALDAPKKGDKVYLPNKLKPDIFPHYMERDKK--FQSTSILGLIF 831

BLAST of CcUC06G126770 vs. TAIR 10
Match: AT2G19920.1 (RNA-dependent RNA polymerase family protein )

HSP 1 Score: 112.8 bits (281), Expect = 1.7e-24
Identity = 134/506 (26.48%), Postives = 213/506 (42.09%), Query Frame = 0

Query: 513 LFSSSTQTLVVPTQDVEI--IPDI----EVNSDGID-----YCFSDGIGKISLSFAR--- 572
           L  S T+ L V   ++ +  I DI    + N+D +D        SDG G IS   AR   
Sbjct: 359 LILSKTKKLEVDMTEITVMQIDDIHCHDQSNNDVLDKNGKPRIHSDGTGYISEDLARMCP 418

Query: 573 ------------QVADKCGVNHIPSAFQIRY----GGYKGVIAVDRN-SFRKLSLRDSML 632
                        +   C V   P   QIR        KG+  +++N   + + +R SM+
Sbjct: 419 LNIFKGKSMRSNNIQGTC-VQEPPLLIQIRMFNDGSAVKGIFLLNKNLPPQTVQVRPSMI 478

Query: 633 K---------FESKNKMLNVTKWSDSMPCYLNREIVTLLSTLGVSDESFEALQQEQLHLL 692
           K         F + N +  VT  +      L++ +V LLS  GV ++ F  +    L   
Sbjct: 479 KVYKDKNLSNFSTFNSLEVVTTSNPPKRAKLSKNLVALLSYGGVPNDFFLDILLNTLEKK 538

Query: 693 GRMLTDKAVALNVLENLHGADSNNILVQMLNHGY---EPNIEPYLSMMLQAHYWNLFSDL 752
             +      A     +    D  N L QM+  G    EP ++ YLS +L+     L  D 
Sbjct: 539 KTIFFKVRAAGKAALHYGNMDDKNAL-QMIMAGIPLDEPYLKHYLSKLLK-----LEKDD 598

Query: 753 RSRCRIYVPKGRILLGCLDETGILNYGQVYACITLTKSELQDRNQKYFHKIDETKSILLG 812
               ++ + +   L+G +D TG L   +V     L KS+                     
Sbjct: 599 LKAGKLPIDESYYLMGTVDPTGELKEDEVSG---LAKSQ--------------------- 658

Query: 813 KVVVTKNPCLHPGDVRVLEAIFHVELEE--KGLVDCLIFPQKGERPHTNECSGGDLDGDL 872
            V+V +NP LH GD+ +L+A +   LE+        + FPQKG R   +E +GGD DGD+
Sbjct: 659 DVLVYRNPGLHFGDIHILKATYVKSLEQYVGNSKYGVFFPQKGPRSLGDEIAGGDFDGDM 718

Query: 873 YFISWDENLI-------PPKTEAPMD--YTGRRPRIMDHDVTLEEIQKFFV--DYMINDT 932
           YFIS +  L+       P  + +P    YTGR+P  +  +   EE+ K F+   +  +  
Sbjct: 719 YFISRNPKLLEHYKPSEPWVSSSPRSKIYTGRQPSELSPEQLEEELFKIFLKTGFSPSSV 778

Query: 933 LGAISTAHLVHADR---------EPKKALSSKCLELAALHSMAVDFAKTGAPAEMPRILK 954
           +G  + + L   DR         + K  +  K L+L  ++  A+D  KTG    +P  +K
Sbjct: 779 IGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKLTDIYYDAIDAPKTGTEVNLPLDVK 831