CcUC06G126130 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G126130
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	protein EMBRYO DEFECTIVE 514
Location	CicolChr06: 28448854 .. 28451019 (-)
RNA-Seq Expression	CcUC06G126130
Synteny	CcUC06G126130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAAGAGACAATCCCTCAACTCGCTGAAAACAATCCCGAAGTAACCAACTCAGGCACCGAAGATATGGAATTGGAAAATACAGAGCCGAAAGGATCAAGTGATGCTTCTGAACCAAGTGAGATCGCTCCAGAAACTAATGGGGATGCAAATTCCAAGCGAGAGAGGGAGGAGGCAAGCGCCGATGAAGGTATTGGAGGCGGGAAAAAGCAGAAGATTGAGAAGTCAGTTGAGGAGGAAAGGCTTGAGAAGGCGGGAGGAGACGATAAGGGAGAGGAGGAGCCTGTTCCTGTGAGTTTAGGCCCCAAGAGCTTTCGATCTTCGGTGGAATTGTTCGATTACTTCTACAAGTTCCTCCATCACTGGCCAGTCAACTTGAACGTGAACCAGGTATAATATTACGAACTTCTTTTTAATGTGCTATCGTCCTCTGTTTTGTTAATTGAAAGCGTGAGAATGGTATTCAGAAAATTTTATTTGGGTTAGAATTGAGAGTTGGAACGTGATTTAAAATTCTTCTTTTCTACTAAATGCTGCTGTTTTGCTTATATTCATTATTGTTTTAATCTGTGAAAGTTGAACAGTTTTAGCAAAAGGGTTTATTGTTCAAACTTATGTTTTTTTCCCCCTTTTTCCGCATTCTCTTCCTAGAACGTTTTTGCATCGATCTAATTTGATATAAAGCTTTTGACATCATTTAGCTTTTATGTGTCATGAATTGTTGTCAATGGTCTTTTAAGTAACTTGGGTATGTAATCTGTTGTGGACTCGAATCACTTCTTGGGGAAAAGCTTGTAATTGCGTACATTTCAGAATCAGAGAGGTGGCGTTCTTCAATATTCTTATGGAGACTAATGATGGTTGCCTTATCAAAAAAAGATTAATGATGGTTGCTTATTAACTTAAGTTCTTTTTTGTATTATTTGAATACAATGCTTGCTTATGGTTCCCCGTAGTTGACTCTAAGTTAATTGAAAACCTAAAGATCGTCTTGGTTCTTCCTGTCAGTTCGATTAATTAGTGTTGTTGGTTTAATTTTGTACAATTTTCTGTGTATATATATAGACACGAACACATATTTGGTTGTTTTGTGGATTCTTTTAGTCACTTCTGGTTTTCATGGCTGGATGGTTTTTCCTAAACTTAATATGATTTTTGAGTCAGTTTTCAATATTTCTTCAAATGTCTGTTGACTGTTGGTTGGTGTCTGTTTGCTCAAACCCACTTACTTCTTTAGATGAGACTGTTTGACATTATTATTTAATCATAGAAATGGAATCTGTGTACTACTAGACAACTCCCAGCCTGGATGAAGAAATTTTATTTGTTTCTGCGAACAGATACTCTTTTGACCTTATTTGCTCATTGAAGAATTTCTTTCAGCAGCTTATTTTACTTTGTTATGTTGTTATTCTTCATGATTCCCTTATTCTTGATTGATTTCAGTGGAAGCTATGATTAGTGTTTGGACATCCATATATTCATGGCTGGTAACAGGTCTTGATCATATGGGGATTATCTTTTTCAAATAATTCTTAAATCAAAACACGAAAGACAGTGAAGTGTTATTCTTTGTTTAGAAGTGTAGTCCTTTAGGCTTTAGCCCACTTTACCATAACTTAAATGGTTATAACATTAGTAATGTAATGTCCTTTGTAGGTTTGAATTCTTGTTCTAGAAAAAGAAGAGTAAAATAATACCCCAAAGTCTTTTACTTGTTGGAAACATCTATAATTGATAATATACAAGATGAATAAGAATAATAAACTGATGCAGGGAAAAAATATATTCATAATGTGGAGGCATTGATTCTGTTAATACAACATTTGATATTTGTTTCTATGGCAGTACGAGCAGATGGTGCTGGTGGATTTGCTTAAGAAGGGGCATGTAGAACCAGAGAAAAAGATTGGCTGTGGTATTCAGGCCTTCCAAGTTCGATACCATCCTATTTGGAAAAGCAAGTGTTTCTTCCTCATCAGGGCGGACGAGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTGGATCATATCCTTCCCCTGCCTGAAAACTTCAAAGGAAAATCTGATGCAAACAGAGCATTAGGTGGTGGTAAGCACCGTGGTGGAGGACGAGGCGGGGGTGGTGGACGTGGAAGAGGAGGGGGTAGGTGGAGAAACTGA

mRNA sequence

ATGGCAGAAGAGACAATCCCTCAACTCGCTGAAAACAATCCCGAAGTAACCAACTCAGGCACCGAAGATATGGAATTGGAAAATACAGAGCCGAAAGGATCAAGTGATGCTTCTGAACCAAGTGAGATCGCTCCAGAAACTAATGGGGATGCAAATTCCAAGCGAGAGAGGGAGGAGGCAAGCGCCGATGAAGGTATTGGAGGCGGGAAAAAGCAGAAGATTGAGAAGTCAGTTGAGGAGGAAAGGCTTGAGAAGGCGGGAGGAGACGATAAGGGAGAGGAGGAGCCTGTTCCTGTGAGTTTAGGCCCCAAGAGCTTTCGATCTTCGGTGGAATTGTTCGATTACTTCTACAAGTTCCTCCATCACTGGCCAGTCAACTTGAACGTGAACCAGTACGAGCAGATGGTGCTGGTGGATTTGCTTAAGAAGGGGCATGTAGAACCAGAGAAAAAGATTGGCTGTGGTATTCAGGCCTTCCAAGTTCGATACCATCCTATTTGGAAAAGCAAGTGTTTCTTCCTCATCAGGGCGGACGAGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTGGATCATATCCTTCCCCTGCCTGAAAACTTCAAAGGAAAATCTGATGCAAACAGAGCATTAGGTGGTGGTAAGCACCGTGGTGGAGGACGAGGCGGGGGTGGTGGACGTGGAAGAGGAGGGGGTAGGTGGAGAAACTGA

Coding sequence (CDS)

ATGGCAGAAGAGACAATCCCTCAACTCGCTGAAAACAATCCCGAAGTAACCAACTCAGGCACCGAAGATATGGAATTGGAAAATACAGAGCCGAAAGGATCAAGTGATGCTTCTGAACCAAGTGAGATCGCTCCAGAAACTAATGGGGATGCAAATTCCAAGCGAGAGAGGGAGGAGGCAAGCGCCGATGAAGGTATTGGAGGCGGGAAAAAGCAGAAGATTGAGAAGTCAGTTGAGGAGGAAAGGCTTGAGAAGGCGGGAGGAGACGATAAGGGAGAGGAGGAGCCTGTTCCTGTGAGTTTAGGCCCCAAGAGCTTTCGATCTTCGGTGGAATTGTTCGATTACTTCTACAAGTTCCTCCATCACTGGCCAGTCAACTTGAACGTGAACCAGTACGAGCAGATGGTGCTGGTGGATTTGCTTAAGAAGGGGCATGTAGAACCAGAGAAAAAGATTGGCTGTGGTATTCAGGCCTTCCAAGTTCGATACCATCCTATTTGGAAAAGCAAGTGTTTCTTCCTCATCAGGGCGGACGAGTCTGCTGATGACTTCAGCTTCAGGAAGTGTGTGGATCATATCCTTCCCCTGCCTGAAAACTTCAAAGGAAAATCTGATGCAAACAGAGCATTAGGTGGTGGTAAGCACCGTGGTGGAGGACGAGGCGGGGGTGGTGGACGTGGAAGAGGAGGGGGTAGGTGGAGAAACTGA

Protein sequence

MAEETIPQLAENNPEVTNSGTEDMELENTEPKGSSDASEPSEIAPETNGDANSKREREEASADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYFYKFLHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLIRADESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGRGGGRWRN

Homology

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BLAST of CcUC06G126130 vs. NCBI nr
Match: XP_008453205.1 (PREDICTED: protein DCL, chloroplastic [Cucumis melo] >KAA0057942.1 protein DCL [Cucumis melo var. makuwa])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 207/236 (87.71%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MAEETIPQLAENNPEVTNSGTEDMELENTEPKGSSDASEPSEIAPETNGDANSKREREEA 60
           MAEETIPQL   +PEVTNSGTEDMELE T PKGSSDASE +E AP  NGDANSKREREE 
Sbjct: 1   MAEETIPQL---DPEVTNSGTEDMELETTVPKGSSDASEATEAAPVINGDANSKREREE- 60

Query: 61  SADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYFYKFL 120
           SAD+G+G GKKQKIEKSVEEER+EK GGD K EEEPVPVSLGPKSFRSSVELFDYFYK L
Sbjct: 61  SADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKIL 120

Query: 121 HHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLIRADES 180
           H+WP+NLNVNQYEQMVLVDLLKKGH+EPEKKIGCGIQAFQ+R+HP+WKSKCFFLIR DES
Sbjct: 121 HNWPINLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIQAFQIRFHPVWKSKCFFLIREDES 180

Query: 181 ADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGR-GGGRWRN 236
           ADDFSFRKCVDHILPLPENFK KSDANRALGGGKHRGGGRGGGGGRGR GGGRWRN
Sbjct: 181 ADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGGGRGRGGGGRWRN 232

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BLAST of CcUC06G126130 vs. NCBI nr
Match: XP_038880608.1 (protein EMBRYO DEFECTIVE 514 [Benincasa hispida])

HSP 1 Score: 384.4 bits (986), Expect = 7.0e-103
Identity = 203/239 (84.94%), Postives = 214/239 (89.54%), Query Frame = 0


Query: 1   MAEETIPQLAENNPEVTNSGTEDMELENTEP----KGSSDASEPSEIAPETNGDANSKRE 60
           MAEETIPQL EN+P VTNSGTEDMELE TEP    K S++ SE +E  P TNGD+ SKRE
Sbjct: 1   MAEETIPQLVENDPAVTNSGTEDMELETTEPETGAKVSTETSEATEAVPVTNGDSTSKRE 60

Query: 61  REEASADEGIGGGKKQKIEKSVEEERLEKAGGDDKG-EEEPVPVSLGPKSFRSSVELFDY 120
           REE SAD+G+G GKKQKIEKSVEEER EK GGD KG EEEPV VSLGPKSF+SS+ELFDY
Sbjct: 61  REEESADDGVGDGKKQKIEKSVEEERFEKVGGDGKGEEEEPVSVSLGPKSFQSSMELFDY 120

Query: 121 FYKFLHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLI 180
           FYK LHHWPVNLNVNQYEQM LVDLLKKGHVEPEKKIGCGI AFQ+RYHP+WKSKCFFLI
Sbjct: 121 FYKILHHWPVNLNVNQYEQMALVDLLKKGHVEPEKKIGCGIHAFQIRYHPVWKSKCFFLI 180

Query: 181 RADESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGRGGGRWR 235
           R DESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGRGGGRWR
Sbjct: 181 REDESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGRGGGRWR 239

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BLAST of CcUC06G126130 vs. NCBI nr
Match: XP_011660085.1 (protein EMBRYO DEFECTIVE 514 [Cucumis sativus] >KGN63669.1 hypothetical protein Csa_014307 [Cucumis sativus])

HSP 1 Score: 379.8 bits (974), Expect = 1.7e-101
Identity = 205/236 (86.86%), Postives = 214/236 (90.68%), Query Frame = 0


Query: 1   MAEETIPQLAENNPEVTNSGTEDMELENTEPKGSSDASEPSEIAPETNGDANSKREREEA 60
           MAEETIPQL   +PEVTNSGTEDMELE TEPK S+DASE +E AP  NGDA SKREREE 
Sbjct: 1   MAEETIPQL---DPEVTNSGTEDMELETTEPKASTDASEANEAAPVINGDATSKREREE- 60

Query: 61  SADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYFYKFL 120
           SAD+G+  GKKQKIEKSVEEERLEK GGD K EEEPVPVSLGPKSFRSSVELFDYFYK L
Sbjct: 61  SADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKIL 120

Query: 121 HHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLIRADES 180
           HHWPVNLNVNQYEQMVLVDLLKKGH+EPEKKIGCGI +FQ+R+HP WKSKCFFLIR DES
Sbjct: 121 HHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDES 180

Query: 181 ADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGR-GGGRWRN 236
           ADDFSFRKCVDHILPLPENFKGK DANRALGGGKHRGGGRGGGGGRGR GGGRWRN
Sbjct: 181 ADDFSFRKCVDHILPLPENFKGKFDANRALGGGKHRGGGRGGGGGRGRGGGGRWRN 232

[Close]

BLAST of CcUC06G126130 vs. NCBI nr
Match: XP_022135230.1 (protein EMBRYO DEFECTIVE 514 [Momordica charantia])

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-90
Identity = 187/239 (78.24%), Postives = 205/239 (85.77%), Query Frame = 0


Query: 1   MAEETIPQLAENNPEVTNSGTEDMELENT----EPKGSSDASEPSEIAPETNGDANSKRE 60
           MAEET PQLAEN+PEVTNS TEDMELE +    EPKG +  SE +E APETNGDANSKRE
Sbjct: 1   MAEETTPQLAENDPEVTNSATEDMELETSEPGAEPKGLNGDSEANEAAPETNGDANSKRE 60

Query: 61  REEASADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYF 120
           REE +ADE IG  KK K+EKSVEEER+EK  GD KG+E+  PVSLGPKSF SSVE+FDYF
Sbjct: 61  REEETADENIGEAKKPKVEKSVEEERMEKVEGDGKGDEKSGPVSLGPKSFGSSVEMFDYF 120

Query: 121 YKFLHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLIR 180
           YKFLH+WP NLN+N+YEQMVL++LLKKGHVEPEKKIGCGI AFQ+R HP +KSKC+FLIR
Sbjct: 121 YKFLHYWPANLNLNEYEQMVLLELLKKGHVEPEKKIGCGIHAFQIRNHPTFKSKCYFLIR 180

Query: 181 ADESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGRGGGRWRN 236
            DES DDFSFRKCVDHILPLPEN K KSDANRALGG KHRGGGRGGGGGRGR GGR RN
Sbjct: 181 EDESVDDFSFRKCVDHILPLPENLKVKSDANRALGGCKHRGGGRGGGGGRGR-GGRSRN 238

[Close]

BLAST of CcUC06G126130 vs. NCBI nr
Match: XP_022933555.1 (protein EMBRYO DEFECTIVE 514-like [Cucurbita moschata])

HSP 1 Score: 340.9 bits (873), Expect = 8.8e-90
Identity = 182/235 (77.45%), Postives = 195/235 (82.98%), Query Frame = 0


Query: 1   MAEETIPQLAENNPEVTNSGTEDMELENTEPKGSSDASEPSEIAPETNGDANSKREREEA 60
           MAEETIPQLAEN PEVTNS  EDMELE+TEPK S   S+ +E AP TNGDANSKREREE 
Sbjct: 1   MAEETIPQLAENGPEVTNSAAEDMELESTEPKVSGGDSDANEAAPVTNGDANSKREREEE 60

Query: 61  SADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYFYKFL 120
            AD+  G  KK K+EKSVEEERLEK   D KGEEE  PVSLGPKSF SSVELFDYFY FL
Sbjct: 61  GADDHAGEAKKPKVEKSVEEERLEKVERDGKGEEEHGPVSLGPKSFGSSVELFDYFYNFL 120

Query: 121 HHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLIRADES 180
           H+WP NLNVNQYE MVL+DL+KKGHVEP+KKIGCG++A Q+RYHP+WKSKCFFLIR D S
Sbjct: 121 HYWPANLNVNQYELMVLLDLIKKGHVEPDKKIGCGVRACQIRYHPMWKSKCFFLIREDGS 180

Query: 181 ADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGRGGGRWRN 236
           ADDFSFRKCVDHILPLPEN K  SDANRALGGGKHRGGGRG       GGGRWRN
Sbjct: 181 ADDFSFRKCVDHILPLPENLKTISDANRALGGGKHRGGGRG-------GGGRWRN 228

[Close]

BLAST of CcUC06G126130 vs. ExPASy Swiss-Prot
Match: Q8L557 (Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 9.6e-47
Identity = 104/179 (58.10%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 52  NSKREREEASADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVE 111
           + KREREE   +E  G  KKQK+ +                EE+  PV LGPK F +SV 
Sbjct: 36  DEKREREETEEEENGGESKKQKVGE----------------EEKSGPVKLGPKEFVTSVA 95

Query: 112 LFDYFYKFLHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKC 171
           +FDYF KFLH WP +L+VN+YE MVL+DL+KKGH EPEKKIG GI+ FQVR HP+WKS+C
Sbjct: 96  MFDYFVKFLHFWPTDLDVNKYEHMVLLDLIKKGHSEPEKKIGGGIKTFQVRTHPMWKSRC 155

Query: 172 FFLIRADESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGRGG 231
           FFL+R D++ADDFSFRKCVD ILPLPEN K         GGG+  GGGR GG G GRGG
Sbjct: 156 FFLVREDDTADDFSFRKCVDQILPLPENMKTPGANGNGHGGGRGGGGGRRGGRGGGRGG 198

[Close]

BLAST of CcUC06G126130 vs. ExPASy Swiss-Prot
Match: Q9C642 (Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05
Identity = 48/167 (28.74%), Postives = 78/167 (46.71%), Query Frame = 0


Query: 31  PKGSSDASEPSEIAPETNGDANSKREREEASADEGIGGGKKQKIEKSVEEERLEKAGGDD 90
           P+G S +  P   A  T  D  +K    E+   E +   +    E S EEE  E+   + 
Sbjct: 36  PRGDSTSLRPRVRALRTESD-GAKIGNSESYGSELLRRPRIASEESSEEEEEEEEE--NS 95

Query: 91  KGEEEPVPVSLGPKSFRSSVELFDYFYKFLH--HWPVNLNVNQYEQMVLVDLLKKGHVEP 150
           +G+E    V    K    +V L  +    LH   +     ++   +  ++++L   H E 
Sbjct: 96  EGDEF---VDWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPEC 155

Query: 151 EKKIGCGIQAFQVRYHPIWK-SKCFFLIRADESADDFSFRKCVDHIL 195
           EKKIGCGI    V +HP ++ S+C F++R D    DFS+ KC+  ++
Sbjct: 156 EKKIGCGIDYIMVGHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLI 196

[Close]

BLAST of CcUC06G126130 vs. ExPASy Swiss-Prot
Match: Q42463 (Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05
Identity = 33/128 (25.78%), Postives = 61/128 (47.66%), Query Frame = 0


Query: 70  KKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYFYKFLH--HWPVNL 129
           + +++ K   ++ + K  GD +G      V    +    +V L  +    LH   + +  
Sbjct: 79  ESEELVKEESDDEVGKKSGDGEGW-----VDWEDQILEDTVPLVGFVRMILHSGKYAIGD 138

Query: 130 NVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWK-SKCFFLIRADESADDFSF 189
            ++   Q  ++  L   H E +KKIG G+    V YHP ++ S+C F++R D    DFS+
Sbjct: 139 RLSPDHQRTILQRLLPYHPECDKKIGPGVDYITVGYHPDFENSRCLFIVRKDGETVDFSY 198

Query: 190 RKCVDHIL 195
            KC+  ++
Sbjct: 199 WKCIKGLI 201

[Close]

BLAST of CcUC06G126130 vs. ExPASy TrEMBL
Match: A0A5A7UQ03 (Protein DCL OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002450 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.9e-104
Identity = 207/236 (87.71%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MAEETIPQLAENNPEVTNSGTEDMELENTEPKGSSDASEPSEIAPETNGDANSKREREEA 60
           MAEETIPQL   +PEVTNSGTEDMELE T PKGSSDASE +E AP  NGDANSKREREE 
Sbjct: 1   MAEETIPQL---DPEVTNSGTEDMELETTVPKGSSDASEATEAAPVINGDANSKREREE- 60

Query: 61  SADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYFYKFL 120
           SAD+G+G GKKQKIEKSVEEER+EK GGD K EEEPVPVSLGPKSFRSSVELFDYFYK L
Sbjct: 61  SADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKIL 120

Query: 121 HHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLIRADES 180
           H+WP+NLNVNQYEQMVLVDLLKKGH+EPEKKIGCGIQAFQ+R+HP+WKSKCFFLIR DES
Sbjct: 121 HNWPINLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIQAFQIRFHPVWKSKCFFLIREDES 180

Query: 181 ADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGR-GGGRWRN 236
           ADDFSFRKCVDHILPLPENFK KSDANRALGGGKHRGGGRGGGGGRGR GGGRWRN
Sbjct: 181 ADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGGGRGRGGGGRWRN 232

[Close]

BLAST of CcUC06G126130 vs. ExPASy TrEMBL
Match: A0A1S3BWT9 (protein DCL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493992 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.9e-104
Identity = 207/236 (87.71%), Postives = 218/236 (92.37%), Query Frame = 0


Query: 1   MAEETIPQLAENNPEVTNSGTEDMELENTEPKGSSDASEPSEIAPETNGDANSKREREEA 60
           MAEETIPQL   +PEVTNSGTEDMELE T PKGSSDASE +E AP  NGDANSKREREE 
Sbjct: 1   MAEETIPQL---DPEVTNSGTEDMELETTVPKGSSDASEATEAAPVINGDANSKREREE- 60

Query: 61  SADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYFYKFL 120
           SAD+G+G GKKQKIEKSVEEER+EK GGD K EEEPVPVSLGPKSFRSSVELFDYFYK L
Sbjct: 61  SADDGVGDGKKQKIEKSVEEERVEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKIL 120

Query: 121 HHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLIRADES 180
           H+WP+NLNVNQYEQMVLVDLLKKGH+EPEKKIGCGIQAFQ+R+HP+WKSKCFFLIR DES
Sbjct: 121 HNWPINLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIQAFQIRFHPVWKSKCFFLIREDES 180

Query: 181 ADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGR-GGGRWRN 236
           ADDFSFRKCVDHILPLPENFK KSDANRALGGGKHRGGGRGGGGGRGR GGGRWRN
Sbjct: 181 ADDFSFRKCVDHILPLPENFKAKSDANRALGGGKHRGGGRGGGGGRGRGGGGRWRN 232

[Close]

BLAST of CcUC06G126130 vs. ExPASy TrEMBL
Match: A0A0A0LRN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009730 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 8.3e-102
Identity = 205/236 (86.86%), Postives = 214/236 (90.68%), Query Frame = 0


Query: 1   MAEETIPQLAENNPEVTNSGTEDMELENTEPKGSSDASEPSEIAPETNGDANSKREREEA 60
           MAEETIPQL   +PEVTNSGTEDMELE TEPK S+DASE +E AP  NGDA SKREREE 
Sbjct: 1   MAEETIPQL---DPEVTNSGTEDMELETTEPKASTDASEANEAAPVINGDATSKREREE- 60

Query: 61  SADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYFYKFL 120
           SAD+G+  GKKQKIEKSVEEERLEK GGD K EEEPVPVSLGPKSFRSSVELFDYFYK L
Sbjct: 61  SADDGVADGKKQKIEKSVEEERLEKLGGDGKCEEEPVPVSLGPKSFRSSVELFDYFYKIL 120

Query: 121 HHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLIRADES 180
           HHWPVNLNVNQYEQMVLVDLLKKGH+EPEKKIGCGI +FQ+R+HP WKSKCFFLIR DES
Sbjct: 121 HHWPVNLNVNQYEQMVLVDLLKKGHLEPEKKIGCGIHSFQIRFHPEWKSKCFFLIREDES 180

Query: 181 ADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGR-GGGRWRN 236
           ADDFSFRKCVDHILPLPENFKGK DANRALGGGKHRGGGRGGGGGRGR GGGRWRN
Sbjct: 181 ADDFSFRKCVDHILPLPENFKGKFDANRALGGGKHRGGGRGGGGGRGRGGGGRWRN 232

[Close]

BLAST of CcUC06G126130 vs. ExPASy TrEMBL
Match: A0A6J1C0K4 (protein EMBRYO DEFECTIVE 514 OS=Momordica charantia OX=3673 GN=LOC111007244 PE=4 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 6.6e-91
Identity = 187/239 (78.24%), Postives = 205/239 (85.77%), Query Frame = 0


Query: 1   MAEETIPQLAENNPEVTNSGTEDMELENT----EPKGSSDASEPSEIAPETNGDANSKRE 60
           MAEET PQLAEN+PEVTNS TEDMELE +    EPKG +  SE +E APETNGDANSKRE
Sbjct: 1   MAEETTPQLAENDPEVTNSATEDMELETSEPGAEPKGLNGDSEANEAAPETNGDANSKRE 60

Query: 61  REEASADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYF 120
           REE +ADE IG  KK K+EKSVEEER+EK  GD KG+E+  PVSLGPKSF SSVE+FDYF
Sbjct: 61  REEETADENIGEAKKPKVEKSVEEERMEKVEGDGKGDEKSGPVSLGPKSFGSSVEMFDYF 120

Query: 121 YKFLHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLIR 180
           YKFLH+WP NLN+N+YEQMVL++LLKKGHVEPEKKIGCGI AFQ+R HP +KSKC+FLIR
Sbjct: 121 YKFLHYWPANLNLNEYEQMVLLELLKKGHVEPEKKIGCGIHAFQIRNHPTFKSKCYFLIR 180

Query: 181 ADESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGRGGGRWRN 236
            DES DDFSFRKCVDHILPLPEN K KSDANRALGG KHRGGGRGGGGGRGR GGR RN
Sbjct: 181 EDESVDDFSFRKCVDHILPLPENLKVKSDANRALGGCKHRGGGRGGGGGRGR-GGRSRN 238

[Close]

BLAST of CcUC06G126130 vs. ExPASy TrEMBL
Match: A0A6J1F569 (protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111440949 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 4.3e-90
Identity = 182/235 (77.45%), Postives = 195/235 (82.98%), Query Frame = 0


Query: 1   MAEETIPQLAENNPEVTNSGTEDMELENTEPKGSSDASEPSEIAPETNGDANSKREREEA 60
           MAEETIPQLAEN PEVTNS  EDMELE+TEPK S   S+ +E AP TNGDANSKREREE 
Sbjct: 1   MAEETIPQLAENGPEVTNSAAEDMELESTEPKVSGGDSDANEAAPVTNGDANSKREREEE 60

Query: 61  SADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVELFDYFYKFL 120
            AD+  G  KK K+EKSVEEERLEK   D KGEEE  PVSLGPKSF SSVELFDYFY FL
Sbjct: 61  GADDHAGEAKKPKVEKSVEEERLEKVERDGKGEEEHGPVSLGPKSFGSSVELFDYFYNFL 120

Query: 121 HHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKCFFLIRADES 180
           H+WP NLNVNQYE MVL+DL+KKGHVEP+KKIGCG++A Q+RYHP+WKSKCFFLIR D S
Sbjct: 121 HYWPANLNVNQYELMVLLDLIKKGHVEPDKKIGCGVRACQIRYHPMWKSKCFFLIREDGS 180

Query: 181 ADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGRGGGRWRN 236
           ADDFSFRKCVDHILPLPEN K  SDANRALGGGKHRGGGRG       GGGRWRN
Sbjct: 181 ADDFSFRKCVDHILPLPENLKTISDANRALGGGKHRGGGRG-------GGGRWRN 228

[Close]

BLAST of CcUC06G126130 vs. TAIR 10
Match: AT5G62440.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 188.3 bits (477), Expect = 6.8e-48
Identity = 104/179 (58.10%), Postives = 123/179 (68.72%), Query Frame = 0


Query: 52  NSKREREEASADEGIGGGKKQKIEKSVEEERLEKAGGDDKGEEEPVPVSLGPKSFRSSVE 111
           + KREREE   +E  G  KKQK+ +                EE+  PV LGPK F +SV 
Sbjct: 36  DEKREREETEEEENGGESKKQKVGE----------------EEKSGPVKLGPKEFVTSVA 95

Query: 112 LFDYFYKFLHHWPVNLNVNQYEQMVLVDLLKKGHVEPEKKIGCGIQAFQVRYHPIWKSKC 171
           +FDYF KFLH WP +L+VN+YE MVL+DL+KKGH EPEKKIG GI+ FQVR HP+WKS+C
Sbjct: 96  MFDYFVKFLHFWPTDLDVNKYEHMVLLDLIKKGHSEPEKKIGGGIKTFQVRTHPMWKSRC 155

Query: 172 FFLIRADESADDFSFRKCVDHILPLPENFKGKSDANRALGGGKHRGGGRGGGGGRGRGG 231
           FFL+R D++ADDFSFRKCVD ILPLPEN K         GGG+  GGGR GG G GRGG
Sbjct: 156 FFLVREDDTADDFSFRKCVDQILPLPENMKTPGANGNGHGGGRGGGGGRRGGRGGGRGG 198

[Close]

BLAST of CcUC06G126130 vs. TAIR 10
Match: AT1G45230.1 (Protein of unknown function (DUF3223) )

HSP 1 Score: 50.4 bits (119), Expect = 2.2e-06
Identity = 48/167 (28.74%), Postives = 78/167 (46.71%), Query Frame = 0


Query: 31  PKGSSDASEPSEIAPETNGDANSKREREEASADEGIGGGKKQKIEKSVEEERLEKAGGDD 90
           P+G S +  P   A  T  D  +K    E+   E +   +    E S EEE  E+   + 
Sbjct: 36  PRGDSTSLRPRVRALRTESD-GAKIGNSESYGSELLRRPRIASEESSEEEEEEEEE--NS 95

Query: 91  KGEEEPVPVSLGPKSFRSSVELFDYFYKFLH--HWPVNLNVNQYEQMVLVDLLKKGHVEP 150
           +G+E    V    K    +V L  +    LH   +     ++   +  ++++L   H E 
Sbjct: 96  EGDEF---VDWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPEC 155

Query: 151 EKKIGCGIQAFQVRYHPIWK-SKCFFLIRADESADDFSFRKCVDHIL 195
           EKKIGCGI    V +HP ++ S+C F++R D    DFS+ KC+  ++
Sbjct: 156 EKKIGCGIDYIMVGHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLI 196

[Close]

BLAST of CcUC06G126130 vs. TAIR 10
Match: AT1G45230.2 (Protein of unknown function (DUF3223) )

HSP 1 Score: 50.1 bits (118), Expect = 2.9e-06
Identity = 48/167 (28.74%), Postives = 78/167 (46.71%), Query Frame = 0


Query: 31  PKGSSDASEPSEIAPETNGDANSKREREEASADEGIGGGKKQKIEKSVEEERLEKAGGDD 90
           P+G S +  P   A  T  D  +K    E+   E +   +    E S EEE  E+   + 
Sbjct: 36  PRGDSTSLRPRVRALRTESD-GAKIGNSESYGSELLRRPRIASEESSEEEEEEEEE--NS 95

Query: 91  KGEEEPVPVSLGPKSFRSSVELFDYFYKFLH--HWPVNLNVNQYEQMVLVDLLKKGHVEP 150
           +G+E    V    K    +V L  +    LH   +     ++   +  ++++L   H E 
Sbjct: 96  EGDEF---VDWEDKILEVTVPLVGFVRMILHSGKYANRDRLSPEHERTIIEMLLPYHPEC 155

Query: 151 EKKIGCGIQAFQVRYHPIWK-SKCFFLIRADESADDFSFRKCVDHIL 195
           EKKIGCGI    V +HP ++ S+C F++R D    DFS+ KC+  ++
Sbjct: 156 EKKIGCGIDYIMVWHHPDFESSRCMFIVRKDGEVVDFSYWKCIKGLI 196

[Close]

BLAST of CcUC06G126130 vs. TAIR 10
Match: AT1G63020.1 (nuclear RNA polymerase D1A )

HSP 1 Score: 45.4 bits (106), Expect = 7.1e-05
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 89   DDKGEEEPVPVSLGPKSFR-SSVELFDYFYK-FLHHWPVNLNVNQYEQMVLVDLLKKGHV 148
            D KG    +P+SL    F   ++EL     K  LH + +N  +N+ ++  LV ++ + H 
Sbjct: 1321 DGKG----IPMSLLRTIFTWKNIELLSQSLKRILHSYEINELLNERDE-GLVKMVLQLHP 1380

Query: 149  EPEKKIGCGIQAFQVRYHPIWKSKCFFLIRADESADDFSFRKCV----DHILPLPENF-K 208
               +KIG G++  +V       S CF ++R D + +DFS+ KCV      I P   NF K
Sbjct: 1381 NSVEKIGPGVKGIRVAKSKHGDSCCFEVVRIDGTFEDFSYHKCVLGATKIIAPKKMNFYK 1440

Query: 209  GKSDANRALGGG 214
             K   N  L  G
Sbjct: 1441 SKYLKNGTLESG 1447

[Close]

BLAST of CcUC06G126130 vs. TAIR 10
Match: AT1G63020.2 (nuclear RNA polymerase D1A )

HSP 1 Score: 45.4 bits (106), Expect = 7.1e-05
Identity = 42/132 (31.82%), Postives = 64/132 (48.48%), Query Frame = 0


Query: 89   DDKGEEEPVPVSLGPKSFR-SSVELFDYFYK-FLHHWPVNLNVNQYEQMVLVDLLKKGHV 148
            D KG    +P+SL    F   ++EL     K  LH + +N  +N+ ++  LV ++ + H 
Sbjct: 1321 DGKG----IPMSLLRTIFTWKNIELLSQSLKRILHSYEINELLNERDE-GLVKMVLQLHP 1380

Query: 149  EPEKKIGCGIQAFQVRYHPIWKSKCFFLIRADESADDFSFRKCV----DHILPLPENF-K 208
               +KIG G++  +V       S CF ++R D + +DFS+ KCV      I P   NF K
Sbjct: 1381 NSVEKIGPGVKGIRVAKSKHGDSCCFEVVRIDGTFEDFSYHKCVLGATKIIAPKKMNFYK 1440

Query: 209  GKSDANRALGGG 214
             K   N  L  G
Sbjct: 1441 SKYLKNGTLESG 1447

The following BLAST results are available for this feature:

BLAST of CcUC06G126130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453205.1	1.8e-103	87.71	PREDICTED: protein DCL, chloroplastic [Cucumis melo] >KAA0057942.1 protein DCL [...	[more]
XP_038880608.1	7.0e-103	84.94	protein EMBRYO DEFECTIVE 514 [Benincasa hispida]	[more]
XP_011660085.1	1.7e-101	86.86	protein EMBRYO DEFECTIVE 514 [Cucumis sativus] >KGN63669.1 hypothetical protein ...	[more]
XP_022135230.1	1.4e-90	78.24	protein EMBRYO DEFECTIVE 514 [Momordica charantia]	[more]
XP_022933555.1	8.8e-90	77.45	protein EMBRYO DEFECTIVE 514-like [Cucurbita moschata]	[more]

BLAST of CcUC06G126130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L557	9.6e-47	58.10	Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana OX=3702 GN=EMB514 PE=1 SV=1	[more]
Q9C642	3.1e-05	28.74	Protein DCL homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DCL PE=2 S...	[more]
Q42463	3.1e-05	25.78	Protein DCL, chloroplastic OS=Solanum lycopersicum OX=4081 GN=DCL PE=2 SV=1	[more]

BLAST of CcUC06G126130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UQ03	8.9e-104	87.71	Protein DCL OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002450 P...	[more]
A0A1S3BWT9	8.9e-104	87.71	protein DCL, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103493992 PE=4 SV=1	[more]
A0A0A0LRN9	8.3e-102	86.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G009730 PE=4 SV=1	[more]
A0A6J1C0K4	6.6e-91	78.24	protein EMBRYO DEFECTIVE 514 OS=Momordica charantia OX=3673 GN=LOC111007244 PE=4...	[more]
A0A6J1F569	4.3e-90	77.45	protein EMBRYO DEFECTIVE 514-like OS=Cucurbita moschata OX=3662 GN=LOC111440949 ...	[more]

BLAST of CcUC06G126130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G62440.1	6.8e-48	58.10	Protein of unknown function (DUF3223)	[more]
AT1G45230.1	2.2e-06	28.74	Protein of unknown function (DUF3223)	[more]
AT1G45230.2	2.9e-06	28.74	Protein of unknown function (DUF3223)	[more]
AT1G63020.1	7.1e-05	31.82	nuclear RNA polymerase D1A	[more]
AT1G63020.2	7.1e-05	31.82	nuclear RNA polymerase D1A	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF11523	DUF3223	coord: 118..190 e-value: 3.1E-25 score: 88.7
None	No IPR available	GENE3D	3.10.450.40		coord: 95..193 e-value: 4.8E-27 score: 96.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..235
None	No IPR available	PANTHER	PTHR33415:SF12	PROTEIN EMBRYO DEFECTIVE 514	coord: 15..224
IPR044673	Protein DCL-like	PANTHER	PTHR33415	FAMILY NOT NAMED	coord: 15..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G126130.1	CcUC06G126130.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017126	nucleologenesis
cellular_component	GO:0005634	nucleus