CcUC06G125830 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCAAATCTCACATTATAAACAGATAAAGCTCACAACACAAAGAACAGAAGAGATCAGAAAAAGGAGGCTCAAAAATAGCTTTTTTATGTCAATAACAATACATTTTTTCTATATATGTTACTTAGCATGAGCCAGTGGAGGTTAGTCCCAAATTGGAATCATCATCAATCTCACCAATCACAACAACAACAACAAGATGCTAACAGATCATCATCTTCTTCCCATGCCCATTTTCCCCACACAAACTCAACATTGTTTAACCACAATAATGCTGTTCCCATGTAAGCACACTAATTTAATTGCCATCAATCTCTTTTCTGATCTATTTCTGTGTTTGGTCTCTTTTCTTTTGGTCATTTGAGAGAAAACAAATCCATTATTGGTTTCATGCTTGGATATATTTCGAAGTGATTTTGAGATAATGTTTTTGTTTTGTCAAAAAAAACAATCACTTTTGAAGTGATTTCATGTGTGTTTTACAAGAAAACCACAGTTTTGACTTGGATTTGATGGTTATACTTGCAACCACTTTCAAGTTTGTAAAGCCAGACAATGTGTTCATAATCAAATTACTTAGGTTAGTTACATGTTGTGATAACCATTTCATTTTTAGTTTTCTATTTTTTAAATTTATACTTGTAATAAGCACTATTTTTTTTCATATGTGATTTTCATGGTTTAATACCAAAATAGTTTTTAGAAATTTGATTTTGTTTTTGAAATCTGTCTTGGAATTGAAATATGTTTATGAAGATAGTAAAAACCTTATCTAAAAATTGGTAAACAAACCAGCATAGTTTTAAATAAAGATCCTATTTGGTAATCATTTCGTTTTTAATTTTTTTTTACTTTTGAAAATTAAGCCCTATAAACATCATTTTCATCTCTAAATTTCATACTTGGTTATCTACTTTTTACCAAAGTTTTCAAAAACCAAGACAATATATGAAAACTATATATAAAAAAAAAAATTTAATTTATTTTTGTTTTTTCTAATTTTTCTAAGAATTCAACTATTTTACTTCAAAAATATGTAAACACATGGGTAAAGAAATGAGAAAATAGGCTTAATTTTAAAAAACCAAATAGTTACCAAACAGAGTCCAAATGATTACCAAATAAAACCCTAGACCTTAGTTAAACACTCTCAACCCGTTAAATAGCCAAATGACCAGGTCAAATCGACGATTACAAGTGAGGAGTATTAAATAATATAATAGATTTGTTTTCATCTATCAACTCAAGCTTTTGATCAATTGGTGACTTAACATCCACCGTTAATAATTTTTGTTTGTGGGGGGGGGGGGGGGGGGGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGTGGGAATAATGTAATAATTCAGGCCAAAGTATGAAGCTATGGAGAGGACATGGGAGAGTGGAGAGCAAGAAGCAGCAATGAACGAAGTGCTTCTTCAAATGCATTCAACAAAGCACTCATGGGGCCAATCCGAAGACACCCTCGAATCCATAGTTCATAGTTCACTGTCCAGGAAACGAACACGATCCAGCTCAGATTATTGCAAAGATGAAAGTTTGATGAGTGGGGCTTCTTTAGAATCTTATAGGACCTTCCAAACCAAAAATTCCATTCAAGATTTAGCTCCAGATCATGATGGATCGGTGATGTTCATATTTATAAACTTGTTTTTGTTGTGCCATTTTGTTTATTTTTTGTGGACAATACTGACTGTTTAGTTTGCTGTTTCTTGGAATTGAACAAATCAGGAGGAAGAACATAACATGAAGGGGAAAACGGATGGAAGTTGCTCCACTAGACAAACTCGAACGGCTATAAATCATAATCAATCTGAAAGAGTAAGTGTCTGTTTAGAATGAGTTTTTAAATATTTAAAAAAATAATAATAAAATACTATTTTGGCCCCTTAATTTTAATTTTGATCAATTTTGGTTTTTGTACTTTCAAAATATTCATTTTGGTCTCCACATTTTCAATTTTGGTTTATTTTGGTCTTATACTCTCGAAATGTTCATTTTAGTCATTATACTTTTAACTTTGAAGTATTTTTGTCTTTGTACTTTTAAAAAGTGACCATTTAAGTTCATCGTTTTCATTTTTAAAGGATTAGAGTGGTAATTTTTTGAAAGTTTAAGGACTAAAATGAACCAACATTGAAAGTATAAGGACCGAAATGAAGATTTTGAAAATACAGAAACTAAAATAAAATAAAAAAGGCAAGAGAATAAGAACCAAAATAGTATTTAAACCGATAAAGAAAAGTAAAATAAAATTTAAAAAAATAAAAAAAAATAAATAAAAAAAAGACTGTTTTTGCACTTTAAAAAACAGTTTTTGACTTGAAATTTAGATAAGTACTTGAGGGTTTAAATCTTTTTTCCTTTTTGTAGAGACGAAGAGATCGAATAAACCAGAAGATGAAAGATCTACAAAAGTTGGTGCCTAATGGAAGTAAGGTATTAGAAACTCTTTGGAATCGTTCTCATTTGTCTTCGATAGAAGTTGGAGGGTGAAAATTCGGATCCTTTTTTCTGGATCTTTGAAGAACTTCAACATAAGTAGCATAATTCAAACTCATATAGGTTTATAAAGTAAAGTCTGAGATTAGAAATTCTCTATATTTAAATTAGATTAACATCTATCCTATATTTTACAGACTGATAGAGCTTCACTTTTGGATGACACGATTCAATACTTGAAGCAACTTCAAGCACAAGTTCAGTTCATGAGCAGCATTAGATCAGCTGTACCACAGACGGTCATGCCTCTAGGAATACAGCAGCAACTTCAAATGTCACTTCTTGCAGCTCGTATGGGACTGCTCGATGCTGCTTCGATGGCTTCCAGCTCCAGTTGCTTCCCTTGTGCTGCTACATTTCCCCCAATTCTACTGCCTTCGGCCATCATCTCAACAACAAAGCCAAAATCTAAACTTTCCACCGGCGCTTTCTTCCCTCCAACCGATCCTTTCTGCACTTTTCTAGCACAAGTAAGTTCAACACAAACTATATATACAAGCAAATCAATAAAAAAATGCAACAATTATTGAAGATCAGATTCAAGTTGCAATAGCTTTTCATGTCTTCTTTTATTTTTGTTTTTTGTATTTAAGTGCTGTTTTTTTGTTGCTGCAGTCAATGGATATGGATTTCTACAGTAAGATGGTGACATTATATTGCCAAGAAGTGAACAGGACTCCACGGCAGACAAGCAAACAGCAATCACAAAGTTTAGAAGGGATCAAGGAGGATGTGTATCAGAGCTAGCCAAAAGAAGTTCCAGCATTTGGTTGAATCCAACACAACTAGTTTTAGTTGAATAGTTAGATATGCCTCATTTCAACCAAATGTTCAAGGCTTTCTCTAGTAATTTTGGTGGATGGAAATGAAAATTTTTATTTATTTATTTATTAATTATTATTAT CCCAAATCTCACATTATAAACAGATAAAGCTCACAACACAAAGAACAGAAGAGATCAGAAAAAGGAGGCTCAAAAATAGCTTTTTTATGTCAATAACAATACATTTTTTCTATATATGTTACTTAGCATGAGCCAGTGGAGGTTAGTCCCAAATTGGAATCATCATCAATCTCACCAATCACAACAACAACAACAAGATGCTAACAGATCATCATCTTCTTCCCATGCCCATTTTCCCCACACAAACTCAACATTGTTTAACCACAATAATGCTGTTCCCATGCCAAAGTATGAAGCTATGGAGAGGACATGGGAGAGTGGAGAGCAAGAAGCAGCAATGAACGAAGTGCTTCTTCAAATGCATTCAACAAAGCACTCATGGGGCCAATCCGAAGACACCCTCGAATCCATAGTTCATAGTTCACTGTCCAGGAAACGAACACGATCCAGCTCAGATTATTGCAAAGATGAAAGTTTGATGAGTGGGGCTTCTTTAGAATCTTATAGGACCTTCCAAACCAAAAATTCCATTCAAGATTTAGCTCCAGATCATGATGGATCGGAGGAAGAACATAACATGAAGGGGAAAACGGATGGAAGTTGCTCCACTAGACAAACTCGAACGGCTATAAATCATAATCAATCTGAAAGAAGACGAAGAGATCGAATAAACCAGAAGATGAAAGATCTACAAAAGTTGGTGCCTAATGGAAGTAAGACTGATAGAGCTTCACTTTTGGATGACACGATTCAATACTTGAAGCAACTTCAAGCACAAGTTCAGTTCATGAGCAGCATTAGATCAGCTGTACCACAGACGGTCATGCCTCTAGGAATACAGCAGCAACTTCAAATGTCACTTCTTGCAGCTCGTATGGGACTGCTCGATGCTGCTTCGATGGCTTCCAGCTCCAGTTGCTTCCCTTGTGCTGCTACATTTCCCCCAATTCTACTGCCTTCGGCCATCATCTCAACAACAAAGCCAAAATCTAAACTTTCCACCGGCGCTTTCTTCCCTCCAACCGATCCTTTCTGCACTTTTCTAGCACAATCAATGGATATGGATTTCTACAGTAAGATGGTGACATTATATTGCCAAGAAGTGAACAGGACTCCACGGCAGACAAGCAAACAGCAATCACAAAGTTTAGAAGGGATCAAGGAGGATGTGTATCAGAGCTAGCCAAAAGAAGTTCCAGCATTTGGTTGAATCCAACACAACTAGTTTTAGTTGAATAGTTAGATATGCCTCATTTCAACCAAATGTTCAAGGCTTTCTCTAGTAATTTTGGTGGATGGAAATGAAAATTTTTATTTATTTATTTATTAATTATTATTAT ATGTTACTTAGCATGAGCCAGTGGAGGTTAGTCCCAAATTGGAATCATCATCAATCTCACCAATCACAACAACAACAACAAGATGCTAACAGATCATCATCTTCTTCCCATGCCCATTTTCCCCACACAAACTCAACATTGTTTAACCACAATAATGCTGTTCCCATGCCAAAGTATGAAGCTATGGAGAGGACATGGGAGAGTGGAGAGCAAGAAGCAGCAATGAACGAAGTGCTTCTTCAAATGCATTCAACAAAGCACTCATGGGGCCAATCCGAAGACACCCTCGAATCCATAGTTCATAGTTCACTGTCCAGGAAACGAACACGATCCAGCTCAGATTATTGCAAAGATGAAAGTTTGATGAGTGGGGCTTCTTTAGAATCTTATAGGACCTTCCAAACCAAAAATTCCATTCAAGATTTAGCTCCAGATCATGATGGATCGGAGGAAGAACATAACATGAAGGGGAAAACGGATGGAAGTTGCTCCACTAGACAAACTCGAACGGCTATAAATCATAATCAATCTGAAAGAAGACGAAGAGATCGAATAAACCAGAAGATGAAAGATCTACAAAAGTTGGTGCCTAATGGAAGTAAGACTGATAGAGCTTCACTTTTGGATGACACGATTCAATACTTGAAGCAACTTCAAGCACAAGTTCAGTTCATGAGCAGCATTAGATCAGCTGTACCACAGACGGTCATGCCTCTAGGAATACAGCAGCAACTTCAAATGTCACTTCTTGCAGCTCGTATGGGACTGCTCGATGCTGCTTCGATGGCTTCCAGCTCCAGTTGCTTCCCTTGTGCTGCTACATTTCCCCCAATTCTACTGCCTTCGGCCATCATCTCAACAACAAAGCCAAAATCTAAACTTTCCACCGGCGCTTTCTTCCCTCCAACCGATCCTTTCTGCACTTTTCTAGCACAATCAATGGATATGGATTTCTACAGTAAGATGGTGACATTATATTGCCAAGAAGTGAACAGGACTCCACGGCAGACAAGCAAACAGCAATCACAAAGTTTAGAAGGGATCAAGGAGGATGTGTATCAGAGCTAG MLLSMSQWRLVPNWNHHQSHQSQQQQQDANRSSSSSHAHFPHTNSTLFNHNNAVPMPKYEAMERTWESGEQEAAMNEVLLQMHSTKHSWGQSEDTLESIVHSSLSRKRTRSSSDYCKDESLMSGASLESYRTFQTKNSIQDLAPDHDGSEEEHNMKGKTDGSCSTRQTRTAINHNQSERRRRDRINQKMKDLQKLVPNGSKTDRASLLDDTIQYLKQLQAQVQFMSSIRSAVPQTVMPLGIQQQLQMSLLAARMGLLDAASMASSSSCFPCAATFPPILLPSAIISTTKPKSKLSTGAFFPPTDPFCTFLAQSMDMDFYSKMVTLYCQEVNRTPRQTSKQQSQSLEGIKEDVYQS Homology
BLAST of CcUC06G125830 vs. NCBI nr
Match: XP_038878568.1 (transcription factor UNE10-like [Benincasa hispida]) HSP 1 Score: 499.6 bits (1285), Expect = 2.2e-137 Identity = 288/361 (79.78%), Postives = 306/361 (84.76%), Query Frame = 0
BLAST of CcUC06G125830 vs. NCBI nr
Match: XP_004138310.2 (transcription factor UNE10 [Cucumis sativus] >KAE8652428.1 hypothetical protein Csa_014349 [Cucumis sativus]) HSP 1 Score: 488.8 bits (1257), Expect = 4.0e-134 Identity = 281/363 (77.41%), Postives = 306/363 (84.30%), Query Frame = 0
BLAST of CcUC06G125830 vs. NCBI nr
Match: XP_008453232.1 (PREDICTED: transcription factor UNE10 [Cucumis melo]) HSP 1 Score: 481.9 bits (1239), Expect = 4.8e-132 Identity = 282/365 (77.26%), Postives = 306/365 (83.84%), Query Frame = 0
BLAST of CcUC06G125830 vs. NCBI nr
Match: XP_022988525.1 (transcription factor PIF7-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 438.7 bits (1127), Expect = 4.7e-119 Identity = 260/359 (72.42%), Postives = 292/359 (81.34%), Query Frame = 0
BLAST of CcUC06G125830 vs. NCBI nr
Match: XP_022921401.1 (transcription factor PIF7-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 436.4 bits (1121), Expect = 2.3e-118 Identity = 260/358 (72.63%), Postives = 292/358 (81.56%), Query Frame = 0
BLAST of CcUC06G125830 vs. ExPASy Swiss-Prot
Match: Q8GZ38 (Transcription factor UNE10 OS=Arabidopsis thaliana OX=3702 GN=UNE10 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 9.1e-25 Identity = 93/227 (40.97%), Postives = 125/227 (55.07%), Query Frame = 0
BLAST of CcUC06G125830 vs. ExPASy Swiss-Prot
Match: Q570R7 (Transcription factor PIF7 OS=Arabidopsis thaliana OX=3702 GN=BHLH72 PE=1 SV=2) HSP 1 Score: 103.2 bits (256), Expect = 6.1e-21 Identity = 118/377 (31.30%), Postives = 166/377 (44.03%), Query Frame = 0
BLAST of CcUC06G125830 vs. ExPASy Swiss-Prot
Match: Q6AT90 (Transcription factor APG OS=Oryza sativa subsp. japonica OX=39947 GN=APG PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 8.0e-13 Identity = 68/194 (35.05%), Postives = 102/194 (52.58%), Query Frame = 0
BLAST of CcUC06G125830 vs. ExPASy Swiss-Prot
Match: O80536 (Transcription factor PIF3 OS=Arabidopsis thaliana OX=3702 GN=PIF3 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.8e-12 Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 0
BLAST of CcUC06G125830 vs. ExPASy Swiss-Prot
Match: Q9FUA4 (Transcription factor SPATULA OS=Arabidopsis thaliana OX=3702 GN=SPT PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.3e-12 Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0
BLAST of CcUC06G125830 vs. ExPASy TrEMBL
Match: A0A1S3BWW4 (transcription factor UNE10 OS=Cucumis melo OX=3656 GN=LOC103494016 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 2.3e-132 Identity = 282/365 (77.26%), Postives = 306/365 (83.84%), Query Frame = 0
BLAST of CcUC06G125830 vs. ExPASy TrEMBL
Match: A0A0A0LSD5 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G011540 PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 8.3e-122 Identity = 253/310 (81.61%), Postives = 273/310 (88.06%), Query Frame = 0
BLAST of CcUC06G125830 vs. ExPASy TrEMBL
Match: A0A6J1JJT0 (transcription factor PIF7-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485739 PE=4 SV=1) HSP 1 Score: 438.7 bits (1127), Expect = 2.3e-119 Identity = 260/359 (72.42%), Postives = 292/359 (81.34%), Query Frame = 0
BLAST of CcUC06G125830 vs. ExPASy TrEMBL
Match: A0A6J1E1A4 (transcription factor PIF7-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429694 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 1.1e-118 Identity = 260/358 (72.63%), Postives = 292/358 (81.56%), Query Frame = 0
BLAST of CcUC06G125830 vs. ExPASy TrEMBL
Match: A0A5A7UWV9 (Transcription factor UNE10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002750 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 1.5e-118 Identity = 252/312 (80.77%), Postives = 270/312 (86.54%), Query Frame = 0
BLAST of CcUC06G125830 vs. TAIR 10
Match: AT4G00050.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 115.9 bits (289), Expect = 6.5e-26 Identity = 93/227 (40.97%), Postives = 125/227 (55.07%), Query Frame = 0
BLAST of CcUC06G125830 vs. TAIR 10
Match: AT5G61270.2 (phytochrome-interacting factor7 ) HSP 1 Score: 106.3 bits (264), Expect = 5.1e-23 Identity = 95/263 (36.12%), Postives = 135/263 (51.33%), Query Frame = 0
BLAST of CcUC06G125830 vs. TAIR 10
Match: AT5G61270.1 (phytochrome-interacting factor7 ) HSP 1 Score: 103.2 bits (256), Expect = 4.4e-22 Identity = 118/377 (31.30%), Postives = 166/377 (44.03%), Query Frame = 0
BLAST of CcUC06G125830 vs. TAIR 10
Match: AT1G09530.1 (phytochrome interacting factor 3 ) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-13 Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 0
BLAST of CcUC06G125830 vs. TAIR 10
Match: AT1G09530.2 (phytochrome interacting factor 3 ) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-13 Identity = 57/144 (39.58%), Postives = 84/144 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|