
CcUC06G125620 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCATGAGCTTTTTAATGACGAGAATCGTATGGTGCGAATTGATATGTCGGAGTACATGGAGAAACACTCCGTTTCCAAGTTCATTGGAGCTCCACCTGGGTATGTTGATTTTTTAATTATAATTAAAATTTTAAATATGTTTTTATTTAAATTAATAATTTTCATCGTAAGTAGACTAGAAAACGAAAAAGTGAATATCTTTTTGGTCTTTTTAGATTGTGGAATATCATTTATGTCTTTCACATATAATTTTTTTTAATCTTTGATGAATGGAAGCATTATAGAAAATTGTCCACATACTATTATATTATTAGAAAATTAATTTTTTATTAATGGTTCAATCGCAATTTGTCACGTGTAGTTGATAGAGGAAAGAATGTATTATTTTTAGATTACGTTTGTTTTTTAGGTATATTGGATACTATGAAGGTGGGCAACTAACAGAGCCAGTGAGCCAGCGACCATATTGCGTAGTTCTTCTTGATGAAGTGGAAAAAGCCCACGTGGATGTTTTGAATATTCTTCTTCAAGTTTTAGATGACGGACGCCTGACCGACGGGCAAGGTTCCACAGTGGACTTCAGAAACACGGTTGTTATCATGACTTCCAATCTTGGAGCTGGGCACCTTCTTGCTGAAAAGTACTGCCCCAAGCATGTTGCTCGTGATAGGGTTCTCCGAAAGGTGTACTTTTTTTTTCTTTAAATTTTTTTTTTAATTATTCATATCTTCATTTTTACATAATTGAATTTTGACTTTTCTATATTAAAATTAAAAAGGTAACTAGTTTTAAATTACTTTTTAAGGCCACCCACACTAATGATTATATCTACTCCTAGGTTTAAACTCTAATTTGGTGTCTCCTTTTTTTTATTATTCTTTTTAGAAAAAATTATTCTTTTTATTTCTAAATTTAAATTTTAGTTTACATTCAGTTTTTAAGTTTTAAAATATTACCTATATATTTCTAGATTTTAAATTTATTTTCTATTTGATTTATTTTTTAATTTTGAATTTAATTTTTATCTGGTCAATAGATTTCAATGTTTATACTTTTAATTTTGATTCTCTTTTATTAATTCTGTATTTGACATTAATTTTAATTAACCAATTTAAAATAATTAGGAATTTTAATACCAAATTTGTGAAAATTTATTTAATGTTTTTAACAAAAATGTATCTTTTCTCTCCTTTTGTTATTCTATATATTCTAACCATTTTGTTTTTTTCGAATTTAATTTCTTGTAGTAATAATTTTAGCAAGACACTGCAATACTAAACATTTAAAAATATAGGATTATTGTTATAATATAAGAGCGAATTTTTGTTGTTGTGCTAAAGATGTTTGTTGTTCGGTGAGTATATGATGTTTACAGGTTAAAGAACATTTCAAGCCAGAATTTGTGAACCGGCTGGACGAGATTTTGATTTTCCGGCCGCTTTCGAAAGATCAACAAAGAAGGATCACTAAATCAATGATGCAAGACGTTACTCGCCGTCTGCCAGAAAAAGGCATTGCAATGGCCGTCACAGAAGCCGCTCTCTACTTCGTTCTTCATCAATGCTTCGATCCGGAAATCATATTTTAGGTTAAAGACAAGGTTTTTTTTTTTTTTTTTTTTTTAATGGGTTTGAAATATATTTTATAATGTTTAGTTTAAAAAAGTAAATCATTTTAGAAAAATTAGAATGTTTAGCAAACACCAAACAAGATTTTGAGGTGTATTTTATCAAAATAATTAAAATAAAAATAAGTTTTTTTGAAAAATTTCTCTCGTTAAACCAAGTCTCTAAATTTTTGTTTATTATGAGTTACTCCTTGTTCTTTTTATTTTGTACTAATTTAGTTTTTAAATTTTAGTATGTAATAATTTAGCCATCGTATCTTTAAATTCGTATCTATTTATATTTTCTAACTACAAAGAATTCATAGAAACTAGATGTCAAATTTTTTAATATTATGATGTGAATTTTTTATTTTATAAAAATATTGAGTTTTTATTTAGTTCATCGGTTCATATTTATGCAAGAAATCTTATTAATCTTGTCACAAAATTCTACGATGGGTACTCAATTGTTAAAAATTGAAAGTACAAAGATTCTATTGCTATATTGTAGATTTCAAGGACTAAATTTTTACAAAATTAAATAGTTACGTATTAAAATTTATGGACTAAAAGTAATTTTTAACTGATACATTTAGATTTAATATGATGTTTTCACATAATTCGAAATGGACATTAAAGAAATTAAAATAATACAAGTGATAGCCATTGTATTTCGTCCATAATGACATTTTATCGATCATTTCATAGACATTATTCAATGAATCACCGGTGTTGCAATGTTTTTGTTTTAGGTTTATGGCGCTAGGCCGATCAGGCGGTGGCTGGAGAAGAAAGTGGTGACGCAGCTTTCGAAGATGCTTATAAAAGAAGAGATCGGCGAGGAATCCACCGTGTACGTGGATGCCGGCGACGGCGGAAAAGATTTGGAGTATAAAGTTGAGAAAAATAATGGTTTGATTAATGGAATCAAAGATGGAAGATATGAGATATTAATTCAAATTCCATGTGTGGGGAAAAATAAAGGTGATGAAAGTGAAGAAGACGAAGGGGGAGAAAATGGAGAGGACGTTGAAACAACGAGTGATAGTGATTAG ATGGCTCATGAGCTTTTTAATGACGAGAATCGTATGGTGCGAATTGATATGTCGGAGTACATGGAGAAACACTCCGTTTCCAAGTTCATTGGAGCTCCACCTGGGTATATTGGATACTATGAAGGTGGGCAACTAACAGAGCCAGTGAGCCAGCGACCATATTGCGTAGTTCTTCTTGATGAAGTGGAAAAAGCCCACGTGGATGTTTTGAATATTCTTCTTCAAGTTTTAGATGACGGACGCCTGACCGACGGGCAAGGTTCCACAGTGGACTTCAGAAACACGGTTGTTATCATGACTTCCAATCTTGGAGCTGGGCACCTTCTTGCTGAAAAGTACTGCCCCAAGCATGTTGCTCGTGATAGGGTTCTCCGAAAGGTTTATGGCGCTAGGCCGATCAGGCGGTGGCTGGAGAAGAAAGTGGTGACGCAGCTTTCGAAGATGCTTATAAAAGAAGAGATCGGCGAGGAATCCACCGTGTACGTGGATGCCGGCGACGGCGGAAAAGATTTGGAGTATAAAGTTGAGAAAAATAATGGTTTGATTAATGGAATCAAAGATGGAAGATATGAGATATTAATTCAAATTCCATGTGTGGGGAAAAATAAAGGTGATGAAAGTGAAGAAGACGAAGGGGGAGAAAATGGAGAGGACGTTGAAACAACGAGTGATAGTGATTAG ATGGCTCATGAGCTTTTTAATGACGAGAATCGTATGGTGCGAATTGATATGTCGGAGTACATGGAGAAACACTCCGTTTCCAAGTTCATTGGAGCTCCACCTGGGTATATTGGATACTATGAAGGTGGGCAACTAACAGAGCCAGTGAGCCAGCGACCATATTGCGTAGTTCTTCTTGATGAAGTGGAAAAAGCCCACGTGGATGTTTTGAATATTCTTCTTCAAGTTTTAGATGACGGACGCCTGACCGACGGGCAAGGTTCCACAGTGGACTTCAGAAACACGGTTGTTATCATGACTTCCAATCTTGGAGCTGGGCACCTTCTTGCTGAAAAGTACTGCCCCAAGCATGTTGCTCGTGATAGGGTTCTCCGAAAGGTTTATGGCGCTAGGCCGATCAGGCGGTGGCTGGAGAAGAAAGTGGTGACGCAGCTTTCGAAGATGCTTATAAAAGAAGAGATCGGCGAGGAATCCACCGTGTACGTGGATGCCGGCGACGGCGGAAAAGATTTGGAGTATAAAGTTGAGAAAAATAATGGTTTGATTAATGGAATCAAAGATGGAAGATATGAGATATTAATTCAAATTCCATGTGTGGGGAAAAATAAAGGTGATGAAAGTGAAGAAGACGAAGGGGGAGAAAATGGAGAGGACGTTGAAACAACGAGTGATAGTGATTAG MAHELFNDENRMVRIDMSEYMEKHSVSKFIGAPPGYIGYYEGGQLTEPVSQRPYCVVLLDEVEKAHVDVLNILLQVLDDGRLTDGQGSTVDFRNTVVIMTSNLGAGHLLAEKYCPKHVARDRVLRKVYGARPIRRWLEKKVVTQLSKMLIKEEIGEESTVYVDAGDGGKDLEYKVEKNNGLINGIKDGRYEILIQIPCVGKNKGDESEEDEGGENGEDVETTSDSD Homology
BLAST of CcUC06G125620 vs. NCBI nr
Match: KAE8652431.1 (hypothetical protein Csa_013437 [Cucumis sativus]) HSP 1 Score: 350.1 bits (897), Expect = 1.4e-92 Identity = 191/293 (65.19%), Postives = 207/293 (70.65%), Query Frame = 0
BLAST of CcUC06G125620 vs. NCBI nr
Match: XP_031737029.1 (chaperone protein ClpB1 [Cucumis sativus]) HSP 1 Score: 344.7 bits (883), Expect = 5.9e-91 Identity = 191/296 (64.53%), Postives = 207/296 (69.93%), Query Frame = 0
BLAST of CcUC06G125620 vs. NCBI nr
Match: KAA0057986.1 (chaperone protein ClpB1 [Cucumis melo var. makuwa]) HSP 1 Score: 344.4 bits (882), Expect = 7.7e-91 Identity = 189/292 (64.73%), Postives = 203/292 (69.52%), Query Frame = 0
BLAST of CcUC06G125620 vs. NCBI nr
Match: XP_008453261.1 (PREDICTED: chaperone protein ClpB1 [Cucumis melo]) HSP 1 Score: 344.4 bits (882), Expect = 7.7e-91 Identity = 189/292 (64.73%), Postives = 203/292 (69.52%), Query Frame = 0
BLAST of CcUC06G125620 vs. NCBI nr
Match: XP_038880335.1 (chaperone protein ClpB1 [Benincasa hispida]) HSP 1 Score: 344.0 bits (881), Expect = 1.0e-90 Identity = 187/295 (63.39%), Postives = 208/295 (70.51%), Query Frame = 0
BLAST of CcUC06G125620 vs. ExPASy Swiss-Prot
Match: P42730 (Chaperone protein ClpB1 OS=Arabidopsis thaliana OX=3702 GN=CLPB1 PE=1 SV=2) HSP 1 Score: 228.8 bits (582), Expect = 6.2e-59 Identity = 142/296 (47.97%), Postives = 173/296 (58.45%), Query Frame = 0
BLAST of CcUC06G125620 vs. ExPASy Swiss-Prot
Match: Q6F2Y7 (Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica OX=39947 GN=CLPB1 PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 8.0e-59 Identity = 138/293 (47.10%), Postives = 167/293 (57.00%), Query Frame = 0
BLAST of CcUC06G125620 vs. ExPASy Swiss-Prot
Match: P31543 (Heat shock protein 100 OS=Trypanosoma brucei brucei OX=5702 GN=HSP100 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.1e-46 Identity = 109/245 (44.49%), Postives = 137/245 (55.92%), Query Frame = 0
BLAST of CcUC06G125620 vs. ExPASy Swiss-Prot
Match: Q9CKC0 (Chaperone protein ClpB OS=Pasteurella multocida (strain Pm70) OX=272843 GN=clpB PE=3 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 5.6e-44 Identity = 96/160 (60.00%), Postives = 117/160 (73.12%), Query Frame = 0
BLAST of CcUC06G125620 vs. ExPASy Swiss-Prot
Match: Q7WSY8 (Chaperone protein ClpB OS=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / DSM 4902 / CIP 103027 / NCIMB 8099 / CIRM-BIA1) OX=754252 GN=clpB PE=2 SV=2) HSP 1 Score: 176.4 bits (446), Expect = 3.6e-43 Identity = 103/241 (42.74%), Postives = 131/241 (54.36%), Query Frame = 0
BLAST of CcUC06G125620 vs. ExPASy TrEMBL
Match: A0A0A0LPI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G013170 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 6.8e-93 Identity = 191/293 (65.19%), Postives = 207/293 (70.65%), Query Frame = 0
BLAST of CcUC06G125620 vs. ExPASy TrEMBL
Match: A0A5A7UUZ9 (Chaperone protein ClpB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G002900 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 3.7e-91 Identity = 189/292 (64.73%), Postives = 203/292 (69.52%), Query Frame = 0
BLAST of CcUC06G125620 vs. ExPASy TrEMBL
Match: A0A1S3BWY7 (chaperone protein ClpB1 OS=Cucumis melo OX=3656 GN=LOC103494035 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 3.7e-91 Identity = 189/292 (64.73%), Postives = 203/292 (69.52%), Query Frame = 0
BLAST of CcUC06G125620 vs. ExPASy TrEMBL
Match: A0A2C9VQM0 (Clp R domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_06G085600 PE=3 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 4.6e-65 Identity = 142/270 (52.59%), Postives = 168/270 (62.22%), Query Frame = 0
BLAST of CcUC06G125620 vs. ExPASy TrEMBL
Match: A0A6A2YFY3 (Chaperone protein ClpB OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111408pilonHSYRG00083 PE=3 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 3.9e-64 Identity = 144/289 (49.83%), Postives = 175/289 (60.55%), Query Frame = 0
BLAST of CcUC06G125620 vs. TAIR 10
Match: AT1G74310.1 (heat shock protein 101 ) HSP 1 Score: 228.8 bits (582), Expect = 4.4e-60 Identity = 142/296 (47.97%), Postives = 173/296 (58.45%), Query Frame = 0
BLAST of CcUC06G125620 vs. TAIR 10
Match: AT2G25140.1 (casein lytic proteinase B4 ) HSP 1 Score: 166.0 bits (419), Expect = 3.5e-41 Identity = 78/109 (71.56%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of CcUC06G125620 vs. TAIR 10
Match: AT5G15450.1 (casein lytic proteinase B3 ) HSP 1 Score: 158.3 bits (399), Expect = 7.3e-39 Identity = 73/109 (66.97%), Postives = 89/109 (81.65%), Query Frame = 0
BLAST of CcUC06G125620 vs. TAIR 10
Match: AT5G50920.1 (CLPC homologue 1 ) HSP 1 Score: 152.5 bits (384), Expect = 4.0e-37 Identity = 82/169 (48.52%), Postives = 113/169 (66.86%), Query Frame = 0
BLAST of CcUC06G125620 vs. TAIR 10
Match: AT3G48870.1 (Clp ATPase ) HSP 1 Score: 150.2 bits (378), Expect = 2.0e-36 Identity = 67/105 (63.81%), Postives = 88/105 (83.81%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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