
CcUC06G125240 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTCTCTCTAGTTTTGTAAGCCTGAGCCAATCCATCTCTCTGCATTTAAAGCTACCCTTTTCTAATTATGACAGAATTCAGAGAAGAGTTAAGATGATTATTGCCATCTTCTCTTAAGAAACCCAAATGACCAAATGAACCAACCCCATGTCCTTTCAAATTAGCATGTATATACCTTTTGCAATAACAACTATTTCTCTTTCATTGACACCTTCTAGCTGTCTTCTGCTCACTGAAAGTCAGAAAATTTATTTGCCTTTGGATTTCCAGGTGGTGCAGTGAGGGTTTTTATCTATCTACCCATTAAAAACTTGTTTTTCCTTTCAAAATTTGGGTTTTGTAGCTTTCATATTATTAGATAACCTTGGATCAGAGAGGTAGCAAAATGGCATGAATGGTCTCTTCAGGTGTCTAAATTCAGCTTCCCCATTCAATAACTTTCCTTAATTCTGTTATTGATTCTTCTTCTTCTTGTTGTTGTTGTTCTTCTTCTTTTTTACCTTAAACTCCTCAAATTTGCTTGTTCCTAGTTATGGAACCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCGGCTAATGGTTCAAGTGATGCAGCTTCTGATGAAGATGATGATGAAGATGAAGAACATAAAGGCTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGAACATCAATTTAAAGGGATGAAAAATCCCCATGGTGAACTAAAGTCTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCAAAGTGGGACAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGCATCTTGATGGGTAAAAGAAACTAGCCAAGCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGGGTATTTCATTTATGCTTTGCTGTAGGCTGAAGAAAAATGAACACTTGGAAAAAAAAAAAATGAGCTGTTTCTTTTACAAGACAATATTTTGGTA ATTCTCTCTAGTTTTGTAAGCCTGAGCCAATCCATCTCTCTGCATTTAAAGCTACCCTTTTCTAATTATGACAGAATTCAGAGAAGAGTTAAGATGATTATTGCCATCTTCTCTTAAGAAACCCAAATGACCAAATGAACCAACCCCATGTCCTTTCAAATTAGCATGTATATACCTTTTGCAATAACAACTATTTCTCTTTCATTGACACCTTCTAGCTGTCTTCTGCTCACTGAAAGTCAGAAAATTTATTTGCCTTTGGATTTCCAGGTGGTGCAGTGAGGGTTTTTATCTATCTACCCATTAAAAACTTGTTTTTCCTTTCAAAATTTGGGTTTTGTAGCTTTCATATTATTAGATAACCTTGGATCAGAGAGGTAGCAAAATGGCATGAATGGTCTCTTCAGTTATGGAACCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCGGCTAATGGTTCAAGTGATGCAGCTTCTGATGAAGATGATGATGAAGATGAAGAACATAAAGGCTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGAACATCAATTTAAAGGGATGAAAAATCCCCATGGTGAACTAAAGTCTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCAAAGTGGGACAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGCATCTTGATGGGTAAAAGAAACTAGCCAAGCTACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTGGGTATTTCATTTATGCTTTGCTGTAGGCTGAAGAAAAATGAACACTTGGAAAAAAAAAAAATGAGCTGTTTCTTTTACAAGACAATATTTTGGTA ATGGTCTCTTCAGTTATGGAACCTTCCCAAATTTTTGGAGTTTCAGAAGAATGTCACAGCAGTGAATCTGGTTGGACTATGTATATTGGATCTCCGGCTAATGGTTCAAGTGATGCAGCTTCTGATGAAGATGATGATGAAGATGAAGAACATAAAGGCTATTATTATGCAGCAAATAACCAAGATGACAGTGATGATTCCATGGCTTCTGATGCTTCTTCAGGCCCAAGTCATCAACAAGAACATCAATTTAAAGGGATGAAAAATCCCCATGGTGAACTAAAGTCTTGCTTAGAAACAAAAACCAAGAAGCCATTAATGGAAAAGAAGAAGCAAAGAGCTGAGAGAAAAGAAGTCAAAGTGGGACAAAAGCCTAAGAGTTCAGTTCAAAGCAGTTCTAAGGTAAGAAAAAGCATCTTGATGGGTAAAAGAAACTAG MVSSVMEPSQIFGVSEECHSSESGWTMYIGSPANGSSDAASDEDDDEDEEHKGYYYAANNQDDSDDSMASDASSGPSHQQEHQFKGMKNPHGELKSCLETKTKKPLMEKKKQRAERKEVKVGQKPKSSVQSSSKVRKSILMGKRN Homology
BLAST of CcUC06G125240 vs. NCBI nr
Match: XP_038879181.1 (protein SOB FIVE-LIKE 3-like [Benincasa hispida]) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53 Identity = 125/142 (88.03%), Postives = 131/142 (92.25%), Query Frame = 0
BLAST of CcUC06G125240 vs. NCBI nr
Match: XP_031737107.1 (uncharacterized protein LOC105434528 [Cucumis sativus] >KAE8652445.1 hypothetical protein Csa_014063 [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 3.2e-42 Identity = 107/138 (77.54%), Postives = 117/138 (84.78%), Query Frame = 0
BLAST of CcUC06G125240 vs. NCBI nr
Match: XP_022135291.1 (uncharacterized protein LOC111007289 isoform X1 [Momordica charantia]) HSP 1 Score: 168.3 bits (425), Expect = 4.8e-38 Identity = 112/163 (68.71%), Postives = 120/163 (73.62%), Query Frame = 0
BLAST of CcUC06G125240 vs. NCBI nr
Match: XP_022987931.1 (uncharacterized protein LOC111485335 isoform X2 [Cucurbita maxima]) HSP 1 Score: 164.5 bits (415), Expect = 7.0e-37 Identity = 115/165 (69.70%), Postives = 122/165 (73.94%), Query Frame = 0
BLAST of CcUC06G125240 vs. NCBI nr
Match: XP_022921474.1 (uncharacterized protein LOC111429737 isoform X2 [Cucurbita moschata]) HSP 1 Score: 164.1 bits (414), Expect = 9.1e-37 Identity = 118/168 (70.24%), Postives = 122/168 (72.62%), Query Frame = 0
BLAST of CcUC06G125240 vs. ExPASy Swiss-Prot
Match: Q9LEZ1 (Protein SUPPRESSOR OF PHYTOCHROME B 5 OS=Arabidopsis thaliana OX=3702 GN=SOB5 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.3e-05 Identity = 41/110 (37.27%), Postives = 53/110 (48.18%), Query Frame = 0
BLAST of CcUC06G125240 vs. ExPASy Swiss-Prot
Match: Q9FKQ9 (Protein SOB FIVE-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=SOFL4 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.6e-04 Identity = 48/136 (35.29%), Postives = 59/136 (43.38%), Query Frame = 0
BLAST of CcUC06G125240 vs. ExPASy TrEMBL
Match: A0A0A0LUQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G014530 PE=3 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 3.6e-47 Identity = 116/146 (79.45%), Postives = 126/146 (86.30%), Query Frame = 0
BLAST of CcUC06G125240 vs. ExPASy TrEMBL
Match: A0A6J1C092 (uncharacterized protein LOC111007289 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007289 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 2.3e-38 Identity = 112/163 (68.71%), Postives = 120/163 (73.62%), Query Frame = 0
BLAST of CcUC06G125240 vs. ExPASy TrEMBL
Match: A0A6J1JFR5 (uncharacterized protein LOC111485335 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485335 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 3.4e-37 Identity = 115/165 (69.70%), Postives = 122/165 (73.94%), Query Frame = 0
BLAST of CcUC06G125240 vs. ExPASy TrEMBL
Match: A0A6J1E0K6 (uncharacterized protein LOC111429737 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429737 PE=3 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 4.4e-37 Identity = 118/168 (70.24%), Postives = 122/168 (72.62%), Query Frame = 0
BLAST of CcUC06G125240 vs. ExPASy TrEMBL
Match: A0A6J1JKS2 (uncharacterized protein LOC111485335 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485335 PE=3 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 1.9e-35 Identity = 111/164 (67.68%), Postives = 120/164 (73.17%), Query Frame = 0
BLAST of CcUC06G125240 vs. TAIR 10
Match: AT5G08150.1 (suppressor of phytochrome b 5 ) HSP 1 Score: 49.7 bits (117), Expect = 2.3e-06 Identity = 41/110 (37.27%), Postives = 53/110 (48.18%), Query Frame = 0
BLAST of CcUC06G125240 vs. TAIR 10
Match: AT5G38790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G30580.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.6e-05 Identity = 48/136 (35.29%), Postives = 59/136 (43.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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