CcUC06G124820 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G124820
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr06: 27293761 .. 27296841 (+)
RNA-Seq Expression	CcUC06G124820
Synteny	CcUC06G124820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTCGTCGTGGTAATTAAATGAAAAGTTGACAAATTCCATTGAATTAAATTAAAAGTTTTGGAAATATCGACAAAGTTTTTCCCATTATTTTAGAAGCCATACAATATTTAAAATATCTGAGAACGCACGTTGATTTGAGGGGAAAATTTTAGTACTAGATTTTGACAATGCAATCACATCCGATCACGTGGTAAGTGAGATACGTGGCAGTCGCAGATATGTCCACGACCAGAAAAGGCCGACAAAGGAGCGTCTAACCGGACGCCACGCGTCCGGTACGTATTGGCGGATGACATGGCAAATATATACTGGTCGTACATTACAATCCTAAAGAAAGCATCTAGAACGTTCTTTTGTGTATGCGTGGGGTCCACCATAGATTCAACAGGAAACTCGTGAAAGTCCTACCCACCGCATTTTTCGGAGCGGACTTCAAATTCTTTATTTAAATTTAATTAATTGTCTAGCACAGAAATTTCAACCGGAATTCATCTTTAGATTTTTCATTTTTTTTTATTTTTTCTTTTAGAAGTTTCTAAAAAGTATCTATGAATTTAAGGAGAAATTTGAAGTTTTTTTTGTTCCTTGGAAGAATACCATAAATTTTGGGACGTTGAGTTAAATTATTAAAGGCACGTTTGACTTAATTTTAAAAATAATAGTTTTTCAAAAATTTATTTTTATTTAAATATTTTTTATAATAACTAATTAAAATAAAAAATTTAATTGCTTTCAAAATCCATTTTGACTGGGTGTTGAACACTTGTATTTTTTTCAAAATGATTTATCTTTCAAATTAAACACTTGAAACTTGTATTCCAAACACACCCTAATTTAGTTAAATAATTTTTGTACGAGGTACAAAATTGTTTAACAAGAAGCTTTAAGATTTGTGTGTTGATTTGAATTTGAAATTTATATTTTTAATGTATTTGAAATAAGTTTGAAATATGTCTAAATTTAATTCAAGGAAATGTTAGATTTCCATGCAAAATTTGATTTAGATTTGGAATATAATTTTAACATTCACACTGTGAAATTTGATTTCAGATAAAAATTTGATTATGCCCAACTTCAATTTGATCCTATTGAAACTCCAATATTTTCTTGGATGAATGTCCAATTTATACATAGAAATAAAAGAAAATCCAAATAAGAAAAAGGAAAAGAATAAGAAAAGATTCTAATTGGCTAAATTATATAAAACATATAAGGTAACGAATAGAATCAAAATTTAAAATTATTTAATTTGTCTTTTAATCTAAATTTAACCATTTATAATTATAATTTGGATCAAGTTTCCCAATTTGATTAGATTCTGAGTATGTTTAAAACAATGGTTCATTTTAAAATATTTTTTTAAAAAATATTAACCTTGTTTTCTTGGGTGGAGGGAGAAAAACGACTATTAAAAAGGTGAGGAATATGGAGTATCTTAATAAATGTGCATGAAGTATACAAGGTTGAAGTTGGTGGGAGTATAATTATTTTAGTATTAGATTGTGGAATATGTGGATCAAACTATAACTCAAGAAAATTTCTAGTACTCCCATAATATCATACTTACTGTGTTTACATTATAAATTTGCCTTTCATTGATTTTATGGACGACAAAATGATGTTAGTAAGTCTCATTGTATTTTTAAAAGCACATTAACGTGGCAAACATTAAATAAATGAAGTATGAAAAATTTTTATACTACTATAATATATAAAATTATTCCTAATAATTCACCTCAAGTTCGTAAGTCAAACCATTTTTTTTTTTATTGGAAAAAGAAAGCCAATATGTTAACATGGGCAAGTTGAATTGATAAAGATGTTATTTATCTTCCCTAAAGATTCTCCTACTCTTATGTTTGAACTACACAAAAAAGAAAATAGGCGTGCTTGTTAACATTTTATTTTACTTTATTTTTATTATTTTTTTTAAATTAGGTTTGTTTCGCACAATTTTTTATTATGACTTTCACATTTTTTGTATAAATATACGAATTCTTAGCGAAACTTAAAAATAAAAACAACTTTTCTTAGTTTTTAAATTTTGGCTTTAATTTTGAAAGCATTACAAAAATTTAGACAACAAAACATGCAAATCAATAGATGGAAGTGCTTAATTTAAAAAAAAAAAAAAATAATAATAATAATAATAATAAAACAAAATTGTTGACAACTTTAACCATTTAGTTTCTAAACTTTAGCTTGTAACCATTTAATCCATAAACTTTCAATTTTATAACAATCTACTCCTTTAATTTTAATATGCAACAATTTAATCTAAGTATTTTAGAGTTTGTAATAATTTAATCTCTATAATAATAATAAAAAATTACTAAAATATTCAATAAATAAATAATAATAATAATAACAACAACAACAACACTTATTTTACTTTATTTCAGTACAAGAGAAAAAAATAACAAAGATTTAAGGGAAAGGCAAATTAGTAATTTTCAACTCAAGTTTCAGGAAATCCAAAAACTGGAAGCATAGGAAGCTAAAATATGAGCAACGAAGGTACACCTACGATTGACCAGGAAAAGTCTAAGATAGAACCCATCACGAAGAAAATCTAGAATGAAGTTGACGGATACTTGAACCTCTTTTTGATAAAATTTTCGTAATAGTGATTATAAAATTACAAACTTAAAAGCATAAAAATCAAAATAATATATATATATATTAAATTACATGAACTAACTTATTACAAATTTAAAAATACGAGACCTAAATTGTTATAAACTATAACCAAAGAGTTTAGGGAGTAAATCCTAAGTTCTGTTAGAGAGACCAAACACATTTTTTGAAATAATAATTATAATAAATGGAATCAACATGTCTGGAGATGGTACATAGATAGATATAACACATATTTGTTAATATTTTATTTAACAATATAATAATAATTTCTACGCGCCTAAGAGCGTTTGAATCATACGAACTCCTCACTATTTAATGGTCAGATTTTGCCTCTTTCACTTATCCGTCATGAACACTGCAACCATCGGAAGCGCATCGGATGCTCTGTTTTTCACTCTAACACTTCCCGGCGGCCTTCTTCATTCTCCCTTCCTCTC

mRNA sequence

ATTTCTCGTCGTGATTTTGACAATGCAATCACATCCGATCACGTGGTAAGTGAGATACGTGGCAGTCGCAGATATGTCCACGACCAGAAAAGGCCGACAAAGGAGCGTCTAACCGGACGCCACGCGTCCGAGCGTTTGAATCATACGAACTCCTCACTATTTAATGGTCAGATTTTGCCTCTTTCACTTATCCGTCATGAACACTGCAACCATCGGAAGCGCATCGGATGCTCTGTTTTTCACTCTAACACTTCCCGGCGGCCTTCTTCATTCTCCCTTCCTCTC

Coding sequence (CDS)

ATTTCTCGTCGTGATTTTGACAATGCAATCACATCCGATCACGTGGTAAGTGAGATACGTGGCAGTCGCAGATATGTCCACGACCAGAAAAGGCCGACAAAGGAGCGTCTAACCGGACGCCACGCGTCCGAGCGTTTGAATCATACGAACTCCTCACTATTTAATGGTCAGATTTTGCCTCTTTCACTTATCCGTCATGAACACTGCAACCATCGGAAGCGCATCGGATGCTCTGTTTTTCACTCTAACACTTCCCGGCGGCCTTCTTCATTCTCCCTTCCTCTC

Protein sequence

ISRRDFDNAITSDHVVSEIRGSRRYVHDQKRPTKERLTGRHASERLNHTNSSLFNGQILPLSLIRHEHCNHRKRIGCSVFHSNTSRRPSSFSLPL

Homology

The following BLAST results are available for this feature:

BLAST of CcUC06G124820 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC06G124820 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC06G124820 vs.


Match Name	E-value	Identity	Description

BLAST of CcUC06G124820 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G124820.1	CcUC06G124820.1	mRNA