CcUC06G123630 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC06G123630
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr06: 26074031 .. 26076584 (-)
RNA-Seq ExpressionCcUC06G123630
SyntenyCcUC06G123630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGTTTATGATATTTAGCACGCTACCTCCATGGAGCACATGAATTACATACCACAGGAGCGAGAATATCTTTAGGGATCACCAGCCATACTTTCCTTGTGTTTCAGCCTTTGTTAGTAAACCTCTTGCACGCCTTTCCGCTAGTTCCATCTCTTTCTGCTTCATATCATAATACAACGAAGTAATTTGATGCTTTCTCTTGTGCAACTTTGAAGGTTTCCCCTTCGTTGAGGCAGCAGGCTACGGAAAAGAAGATGCAGACAAGCATATCAGCGCAATGGAGAAATAAAAATATGAAATATAAGACCTCACTACGCCTTACTCACAGAGCATCTTTCTCCTATTACCGCCACATCCAGATTCGTACGTATGGTTCAGTATATAGTGTGCCTTGAACACACAAAAAAAATAAAAAAATAAAAAATAAAAAAATAGCGCCTTTTTTGCACTTCATGCTTAAGTCCCAAAAGACTAATGCGGTTTAGTGTGCCTAGAACATTAAAAAACACTGATCAACCCACACGACAAAATTCAGAGAAGGAATCCTAGAGTTTTCAGTCTCCCCCACTGGTACCCTATTTTCAAACAAGATTCAGAGTCCCAAGACCCCTTTGTACAGTCTATTTGCCTGTAGATTTTGGAGACTCGTGTTTGATGCATTCGGTCAGGCCTTAGGTATAGATAGTGATATAGCCTACTGCAGAGGGACGCTATTTTCAAACAAGATTCAGAGTCCCAAATACTCTCTCATGCTGTCCCCCACCCCTTAAAAGTAGGCATATGTTATTTGGCTTAATCTCATTTGCATTTATTTTTCCAGGGAGAAGTTAGGGTTTGGACCCCTTATCCTCCTAAGGGTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATGATTATTATTTTTTTTAAAGAAACATTTTACCAATGAATGAAAAGAATGCGGTGAAGTATCAAATCCACAAATCGATCAAAAGAGGAGAAAGAGTCTCTGAAAAGATGCCCATTATGTTCGTCCAGAGTCCTTCTAAGGCACATTTCTCTATTGCTTCAACGCCTCCTTATAAGGCATCAATTTTTTCCACTTTATGGAAGTTTACAATTCCAAAGAAGGTTAAGGTTTTTGGATGGCAAGTTAATACCTTGAATCATTTCCAAAGACACTTATTTCGTTTTGTTCCCGCAATTGTGCATTTTCTGCAAGTGGCATCATTTGTTGTGGGATTGCCAATTTGTACACTACTTCAAACTCATTGGTTTGGTATTACCGGGGCAGGTAATAGAGATGGGATCTTAGTTGGAGGTGTTTTTGAATCTTCCATTTCGGGAGAGAAACAAAGTATTGTGACATGTTAACTTCTTTGTTGTTTTGTAGGGTATTTGGCTTGAGTGAAAAGATAGGATTTTTACAGAGGTCGAGAGTTTGAGAGTGGAGGTTTCAGAGGCAGCAAGGTTTAATGCTTTTGTGTAGGTGTTAGTCACTAGGCCTTTTTGGAACAATGATTTTAGTCTCGTTTTTTGGATTGGAGTATTTTTTGTAGCTAGTGTCCGACTCACACGTTTTTTAATTTGTTTTTTGTATGCCCCTATATTCTTTCATGTTTTTTAAAGGAAACCACCATTTTCTTACCCAAAGAAAATCTATCTATATATATGTATGTGTTCATTGAAATTATTCCATTAATGATCTAAGTGATAACTAGAGGGGCTTTTTGTAACCCCCACCCCCACCCATTAACCTTAGGAAGCCTTTCCTTCCTTTTTCTAGAACATTACTTTACTGAAATCTTATTTCGCCCTTAAAGAGGTAATTACAAAAATGAGCATATCAATTACATCTAGCAAGAGCAACAAAATTATAGAGTTTCTTTATCCCTACGAGAATACCAGCCAGTGGAAAGATGGTGAATTAAAGACTCCACTGATAAGTTATACCAAATCTTCCTATCGCCCCCTACCCTCAGATGTATTCTCTTCTCGGTCCCCAAAGTCAGACAAGATGGCAACAGTTTACTAGTTTCTCATAATTTCAAATCAATCAGCATCTTTATGGGTGTGTCATCTGGAACAATTCTTCAGAGCTAAATAAAGTGTACTTAAAAAAATAAATTATTTTCCTTCACACGTTTATTTGCATTTAGACATTCTTAGGAACAATCAAATATTTTTTTTCAAGTTAAGGGATCTAAAATGGAAAATCCAAACGAAGAAAGCCTTCAAATCTCCACTTTTGTATCTTTTCGTTCATTGATGAAGTTCTCCCAAGGGTCAATTCAAATGATGAAAGCCTTCATATCTCCATTTTCATCCTATTTCAACGATGAAGTACTTCCAAAACGACTCGAAAGACACTTTTTCTCCCAGGAAAAAAAAAACTTGATATTTCTCTCAAGATAAAGAGACCAAAGAAAAGCTCTCAGCCAAGTAAGCCAGGTTAATCTTTGCATTCCCTTTGCAGGTGTGTCATCCAAAATGGAAGTTAGAAGACTCTTGATGTCATTCAGCAAGGAGTTGCCCGACAAAATGAGGAAAGAATAA

mRNA sequence

ATGCAAAACATTACTTTACTGAAATCTTATTTCGCCCTTAAAGAGGTAATTACAAAAATGAGCATATCAATTACATCTAGCAAGAGCAACAAAATTATAGAGTTTCTTTATCCCTACGAGAATACCAGCCAGTGGAAAGATGGTGAATTAAAGACTCCACTGATAAGTTATACCAAATCTTCCTATCGCCCCCTACCCTCAGATGTATTCTCTTCTCGGTCCCCAAAGTCAGACAAGATGGCAACAGGATCTAAAATGGAAAATCCAAACGAAGAAAGCCTTCAAATCTCCACTTTTGTATCTTTTCGTTCATTGATGAAGTTCTCCCAAGGGTCAATTCAAATGATGAAAGCCTTCATATCTCCATTTTCATCCTATTTCAACGATGAAATAAAGAGACCAAAGAAAAGCTCTCAGCCAAGTAAGCCAGGTGTGTCATCCAAAATGGAAGTTAGAAGACTCTTGATGTCATTCAGCAAGGAGTTGCCCGACAAAATGAGGAAAGAATAA

Coding sequence (CDS)

ATGCAAAACATTACTTTACTGAAATCTTATTTCGCCCTTAAAGAGGTAATTACAAAAATGAGCATATCAATTACATCTAGCAAGAGCAACAAAATTATAGAGTTTCTTTATCCCTACGAGAATACCAGCCAGTGGAAAGATGGTGAATTAAAGACTCCACTGATAAGTTATACCAAATCTTCCTATCGCCCCCTACCCTCAGATGTATTCTCTTCTCGGTCCCCAAAGTCAGACAAGATGGCAACAGGATCTAAAATGGAAAATCCAAACGAAGAAAGCCTTCAAATCTCCACTTTTGTATCTTTTCGTTCATTGATGAAGTTCTCCCAAGGGTCAATTCAAATGATGAAAGCCTTCATATCTCCATTTTCATCCTATTTCAACGATGAAATAAAGAGACCAAAGAAAAGCTCTCAGCCAAGTAAGCCAGGTGTGTCATCCAAAATGGAAGTTAGAAGACTCTTGATGTCATTCAGCAAGGAGTTGCCCGACAAAATGAGGAAAGAATAA

Protein sequence

MQNITLLKSYFALKEVITKMSISITSSKSNKIIEFLYPYENTSQWKDGELKTPLISYTKSSYRPLPSDVFSSRSPKSDKMATGSKMENPNEESLQISTFVSFRSLMKFSQGSIQMMKAFISPFSSYFNDEIKRPKKSSQPSKPGVSSKMEVRRLLMSFSKELPDKMRKE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..150

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC06G123630.1CcUC06G123630.1mRNA