CcUC06G122490 (gene) Watermelon (PI 537277) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGGTTTATGATATCTTACAGCTAGCTGTATATTCAATTGAATGCCAGCCCTAACTGTAATTGGCTCCGAAGGCGAGATTATATAAACTCTCTTTTTTCTTCATAAATTTTATCGTCATTCTTTTGGGAAGGGGGAGGGGGAGAATTTCAGAGTTTGATCGATCTCTAATGGCGAAATCCACATCGCAACAGGTTCAGATTAGGGAATCGAATGGAAATGTCGTGATGAAAACTAAAACGAAGCGAACTCGGAGGAGCGTTCCGAGAGATTCTCCTCCTCAACGAAGCTCTATTTATCGCGGCGTTACTAGGTTTTCAATTATTTGCTCTGCCTCATTGTTGCTAATTCTTCTGGGAGGTTATTGTTCTTCATTGAGAGATTTAGATTTCTTTGGTTGTGGCGTTTTTGAATGTTTAGGCATCGTTGGACGGGTAGATATGAGGCTCATTTGTGGGATAAGAATTGCTGGAATGAATCGCAGAACAAGAAAGGAAGACAAGGTAATTAGTTCTAATGAATGCTTAAATCATAATTTTAGAGAAAATTTGATTAACATTAGTATGATTTTTCAAATGCCATGTGTAATCCAACTTCTAACTGAAAAATTAATAATACATGTTTGGTCTCCACACAGAATTTTTAAAGCATTCTTTATGGAAAAACTTTTATGAAAAACTTTCTAGTACTAGTTGGAACAACGATAATATATTTTTCAATTGTTACGAAGTTTAGAAGTATTCTTTTATCTAACAATATATGGGAAGTAATTAAATTTACAATCTGCCAAATTTATGATAGTGCGTAAATGAGAGAATATATGAAAAAAACGTAATGATTGTGCGCGGGCTAGGCTACACCCATTTCCATGCCGGAGAATAATTAGGTGCACATATTTCCATAATCTTCTTTTCTTTTACTCACAAAAGAAAGTTAAAAAATAAAAAAAAATAAAAAATAAAAAATTGTGTTGCATGGCACGATTTCACTTCGCTATAAGAAATTGCATGGAGAATAATTGTGTGGCACAATTTCACTTCACTAGTTGAGTTGCACAAAAGATGGATGCACTAAGCTTTTTCCTCCCACTATTTCTTTACCTCCTTGTGTAAAAATAAAATAAGAAAATTCATTAAAAAAATTAGACACGTGATAACTACTCATTAGTTGTTGTATGAGCTACACAAAAGATGATTGTAACCTGTAGTGCACTAACTATTTTTTAAAAAATATAGTTAGTAAAACGTTTCATGCTCGCTTGGATCTGCCACTCTCTCAAATGTCTGGTTGAACAAGAAAAATTTTCTAGACTTAAGTTGTATGTCTAAAATGTTTTTTCAAAAAACTTTAAAAGCTAATGTCATAGCTTTAATTTGAGGGTTTTTCTTTTATTTTAGTCTTAATGTTTAACTTTTTATTCATTTTAGTCTTTACATCTTTGGAATGAGTGAATGGCCGAGTTTGATCGATCTCTAATGGCGAAATCCACATCGCAACAGGTTCAGATTAGGGAATCGAATGGAAATGTCGTGATGAAAACTAAAACGAAGCGAACTCGGAGGAGCGTTCCGAGAGATTCTCCTCCTCAACGAAGCTCTATTTATCGCGGCGTTACTAGGTTTTCAATTATTTGCTCTGCCTCATTGTTGCTAATTCTTCTGGGAGGTTATTGTTCTTCATTGAGAGATTTAGATTTCTTTGGTTGTGGCGTTTTTGAATGTTTAGGCATCGTTGGACGGGTAGATATGAGGCTCATTTGTGGGATAAGAATTGCTGGAATGAATCGCAGAACAAGAAAGGAAGACAAGTCTTTACATCTTTGGAATGAGTGA ATGGCCGAGTTTGATCGATCTCTAATGGCGAAATCCACATCGCAACAGGTTCAGATTAGGGAATCGAATGGAAATGTCGTGATGAAAACTAAAACGAAGCGAACTCGGAGGAGCGTTCCGAGAGATTCTCCTCCTCAACGAAGCTCTATTTATCGCGGCGTTACTAGGTTTTCAATTATTTGCTCTGCCTCATTGTTGCTAATTCTTCTGGGAGGTTATTGTTCTTCATTGAGAGATTTAGATTTCTTTGGTTGTGGCGTTTTTGAATGTTTAGGCATCGTTGGACGGGTAGATATGAGGCTCATTTGTGGGATAAGAATTGCTGGAATGAATCGCAGAACAAGAAAGGAAGACAAGTCTTTACATCTTTGGAATGAGTGA MAEFDRSLMAKSTSQQVQIRESNGNVVMKTKTKRTRRSVPRDSPPQRSSIYRGVTRFSIICSASLLLILLGGYCSSLRDLDFFGCGVFECLGIVGRVDMRLICGIRIAGMNRRTRKEDKSLHLWNE Homology
BLAST of CcUC06G122490 vs. NCBI nr
Match: XP_038880157.1 (AP2-like ethylene-responsive transcription factor At1g16060 [Benincasa hispida]) HSP 1 Score: 87.4 bits (215), Expect = 9.4e-14 Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of CcUC06G122490 vs. NCBI nr
Match: KAA0035112.1 (AP2-like ethylene-responsive transcription factor [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 2.1e-13 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of CcUC06G122490 vs. NCBI nr
Match: TYJ95967.1 (AP2-like ethylene-responsive transcription factor [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 2.1e-13 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of CcUC06G122490 vs. NCBI nr
Match: XP_008443823.1 (PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 [Cucumis melo]) HSP 1 Score: 86.3 bits (212), Expect = 2.1e-13 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of CcUC06G122490 vs. NCBI nr
Match: KAE8653062.1 (hypothetical protein Csa_019977 [Cucumis sativus]) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-12 Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 0
BLAST of CcUC06G122490 vs. ExPASy Swiss-Prot
Match: Q94AN4 (AP2-like ethylene-responsive transcription factor At1g16060 OS=Arabidopsis thaliana OX=3702 GN=At1g16060 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 9.2e-04 Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 0
BLAST of CcUC06G122490 vs. ExPASy TrEMBL
Match: A0A5A7SV43 (AP2-like ethylene-responsive transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001890 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.0e-13 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of CcUC06G122490 vs. ExPASy TrEMBL
Match: A0A5D3BA15 (AP2-like ethylene-responsive transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00360 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.0e-13 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of CcUC06G122490 vs. ExPASy TrEMBL
Match: A0A1S3B9P0 (AP2-like ethylene-responsive transcription factor At1g16060 OS=Cucumis melo OX=3656 GN=LOC103487326 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.0e-13 Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0
BLAST of CcUC06G122490 vs. ExPASy TrEMBL
Match: A0A0A0LTX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G275920 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 6.6e-13 Identity = 45/49 (91.84%), Postives = 47/49 (95.92%), Query Frame = 0
BLAST of CcUC06G122490 vs. ExPASy TrEMBL
Match: A0A6J1JK11 (AP2-like ethylene-responsive transcription factor At1g16060 OS=Cucurbita maxima OX=3661 GN=LOC111485798 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of CcUC06G122490 vs. TAIR 10
Match: AT1G16060.1 (ARIA-interacting double AP2 domain protein ) HSP 1 Score: 44.7 bits (104), Expect = 6.5e-05 Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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