CcUC06G122030 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAGAAAGAGATGGAAGTTGTAAAAGGGTTGGATCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCCTCAAGAAATCAACCCAAGAATGGTGTAAACACAAGAGCTACTTATACACTCAAGGAAGATGGAACTGTGAATGTGGTGAATGAAACTTGGAGTGATGGCAAGAGAAGTTCCATTGAAGGTGTGGCTTACAAGGCTGAGCCTTCAAGCCAAGAGGCCAAGTTCAAGGTCAAATTTTATTTGCCTCCTTTTCTTCCAATCATTCCAGTGGTTGGCAATTACTGGGTTTTGTATATTGATCAAGATTACCAGTATGTCTTGGTTGGGGAGCCCTCAAGGAAGAATCTTTGGGTATGTTTTCAGAATTCACTTTCTCATTCTCAATTTTTCATAATCTTGGGTTTTGTCTATTCATGGGGATTTTTTATGGTTTTGAGAGTTCTAAACTGTCTTTCTATGGTTTAGATATGCAAAATGGGTGACAAATTAGTGCTAGAATGAAGTATAGTACTCTCGTAATACTAGAAAGAAAAGAAAAAAAAAAAAGGAAAAGAAGCCGAGAAGGCGAAGTTTATTATCAAAAGCCTTGATCCTTGAAACCAAAACCTGATTAACTAGAGATTTAAAGGCAGTTGCAAGTGTGTTAATTTTTTTCTTATTTCTGGCCTTTGGTTGAAGTTATATGTTTATGCCAATTAAATGCTTAACAAATGTTAAATGACCTACCGTTGGTTTTCTAATTTGAAAACTAATTTGACTTGAAAGAAAAGAAAGTATTTTGTATACCTTCCACAATAAATTTAGAAGGTACAAACTTCTAACCTTAAAGATAAGAAGTATAACTAAAGTGAGATTAAGTTAGTGATTGTTGAATTGCTGGCATTAAAGTTGTGTAGTGATTGGTCATAAGTGGATTTTCTGACTAAACTGCTACCGAACCATTGAGGAGTGACTAAACTGCTACCGAACCATTGAGGAGTGCAAATTGAGTGCAAATTGACCATCAATTGAACAGGTGGCGATTTATGTGAGTTTTAAGAAATGTCGGTTTGGAACACCAATAGGACACCAACCAAACCAAGTCCCTCTTCTTCTCTAACCAACCATCGTCGGTTAAATTAATTTTGATTGATTGGTTCAATTTTTCGATCTATCATGTTCTAGTTAGCATGACTTTCCTCACAAGTTATTTATATATATAATATGTTAATTGTACATATATTCGACATGATTAAAACAATTTCTTCCACATATTGTATTAAGATGAGGAATATGTGGTGTGTTGTCAGATATTGAGCAGAAATACTCACCTTAACGAGGAGATATACAATCAGCTGCTTGAAAAGGCCAAGGAGGAGGGTTATGATGTAAGCAAACTACACAAGACACCACAGAATGATCCTCCACCAGAAGGAGAAGGTCCCAAAGATACAAAAGGCATATGGTGGATTAAGTCCATTCTGGGAAAATAA ATGGCAAAGAAAGAGATGGAAGTTGTAAAAGGGTTGGATCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCCTCAAGAAATCAACCCAAGAATGGTGTAAACACAAGAGCTACTTATACACTCAAGGAAGATGGAACTGTGAATGTGGTGAATGAAACTTGGAGTGATGGCAAGAGAAGTTCCATTGAAGGTGTGGCTTACAAGGCTGAGCCTTCAAGCCAAGAGGCCAAGTTCAAGGTCAAATTTTATTTGCCTCCTTTTCTTCCAATCATTCCAGTGGTTGGCAATTACTGGGTTTTGTATATTGATCAAGATTACCAGTATGTCTTGGTTGGGGAGCCCTCAAGGAAGAATCTTTGGATATTGAGCAGAAATACTCACCTTAACGAGGAGATATACAATCAGCTGCTTGAAAAGGCCAAGGAGGAGGGTTATGATGTAAGCAAACTACACAAGACACCACAGAATGATCCTCCACCAGAAGGAGAAGGTCCCAAAGATACAAAAGGCATATGGTGGATTAAGTCCATTCTGGGAAAATAA ATGGCAAAGAAAGAGATGGAAGTTGTAAAAGGGTTGGATCTTGAGAAGTACATGGGAAGATGGTATGAGATAGCTTCAATTCCCTCAAGAAATCAACCCAAGAATGGTGTAAACACAAGAGCTACTTATACACTCAAGGAAGATGGAACTGTGAATGTGGTGAATGAAACTTGGAGTGATGGCAAGAGAAGTTCCATTGAAGGTGTGGCTTACAAGGCTGAGCCTTCAAGCCAAGAGGCCAAGTTCAAGGTCAAATTTTATTTGCCTCCTTTTCTTCCAATCATTCCAGTGGTTGGCAATTACTGGGTTTTGTATATTGATCAAGATTACCAGTATGTCTTGGTTGGGGAGCCCTCAAGGAAGAATCTTTGGATATTGAGCAGAAATACTCACCTTAACGAGGAGATATACAATCAGCTGCTTGAAAAGGCCAAGGAGGAGGGTTATGATGTAAGCAAACTACACAAGACACCACAGAATGATCCTCCACCAGAAGGAGAAGGTCCCAAAGATACAAAAGGCATATGGTGGATTAAGTCCATTCTGGGAAAATAA MAKKEMEVVKGLDLEKYMGRWYEIASIPSRNQPKNGVNTRATYTLKEDGTVNVVNETWSDGKRSSIEGVAYKAEPSSQEAKFKVKFYLPPFLPIIPVVGNYWVLYIDQDYQYVLVGEPSRKNLWILSRNTHLNEEIYNQLLEKAKEEGYDVSKLHKTPQNDPPPEGEGPKDTKGIWWIKSILGK Homology
BLAST of CcUC06G122030 vs. NCBI nr
Match: XP_023516759.1 (temperature-induced lipocalin-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 364.0 bits (933), Expect = 7.6e-97 Identity = 175/182 (96.15%), Postives = 178/182 (97.80%), Query Frame = 0
BLAST of CcUC06G122030 vs. NCBI nr
Match: KAG6589786.1 (Temperature-induced lipocalin-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023459.1 Temperature-induced lipocalin-1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 362.8 bits (930), Expect = 1.7e-96 Identity = 174/182 (95.60%), Postives = 178/182 (97.80%), Query Frame = 0
BLAST of CcUC06G122030 vs. NCBI nr
Match: XP_023005977.1 (temperature-induced lipocalin-1 [Cucurbita maxima] >XP_023529982.1 temperature-induced lipocalin-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 362.1 bits (928), Expect = 2.9e-96 Identity = 173/184 (94.02%), Postives = 178/184 (96.74%), Query Frame = 0
BLAST of CcUC06G122030 vs. NCBI nr
Match: KAG7035667.1 (Two-component response regulator ORR23 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 361.7 bits (927), Expect = 3.8e-96 Identity = 172/184 (93.48%), Postives = 178/184 (96.74%), Query Frame = 0
BLAST of CcUC06G122030 vs. NCBI nr
Match: KAG6587839.1 (Two-component response regulator ORR23, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 360.5 bits (924), Expect = 8.4e-96 Identity = 171/184 (92.93%), Postives = 178/184 (96.74%), Query Frame = 0
BLAST of CcUC06G122030 vs. ExPASy Swiss-Prot
Match: Q9FGT8 (Temperature-induced lipocalin-1 OS=Arabidopsis thaliana OX=3702 GN=TIL PE=1 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 4.5e-76 Identity = 132/183 (72.13%), Postives = 154/183 (84.15%), Query Frame = 0
BLAST of CcUC06G122030 vs. ExPASy Swiss-Prot
Match: Q46036 (Outer membrane lipoprotein Blc OS=Citrobacter freundii OX=546 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.6e-17 Identity = 56/154 (36.36%), Postives = 89/154 (57.79%), Query Frame = 0
BLAST of CcUC06G122030 vs. ExPASy Swiss-Prot
Match: P0A902 (Outer membrane lipoprotein Blc OS=Escherichia coli O157:H7 OX=83334 GN=blc PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 8.1e-17 Identity = 54/148 (36.49%), Postives = 84/148 (56.76%), Query Frame = 0
BLAST of CcUC06G122030 vs. ExPASy Swiss-Prot
Match: P0A901 (Outer membrane lipoprotein Blc OS=Escherichia coli (strain K12) OX=83333 GN=blc PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 8.1e-17 Identity = 54/148 (36.49%), Postives = 84/148 (56.76%), Query Frame = 0
BLAST of CcUC06G122030 vs. ExPASy Swiss-Prot
Match: Q5URA7 (Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R877 PE=1 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.0e-16 Identity = 55/155 (35.48%), Postives = 83/155 (53.55%), Query Frame = 0
BLAST of CcUC06G122030 vs. ExPASy TrEMBL
Match: A0A6J1KUN3 (temperature-induced lipocalin-1 OS=Cucurbita maxima OX=3661 GN=LOC111498851 PE=3 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.4e-96 Identity = 173/184 (94.02%), Postives = 178/184 (96.74%), Query Frame = 0
BLAST of CcUC06G122030 vs. ExPASy TrEMBL
Match: A0A6J1E6X6 (temperature-induced lipocalin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111429980 PE=3 SV=1) HSP 1 Score: 360.5 bits (924), Expect = 4.1e-96 Identity = 173/182 (95.05%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of CcUC06G122030 vs. ExPASy TrEMBL
Match: A0A6J1JBW0 (temperature-induced lipocalin-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485369 PE=3 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 1.5e-95 Identity = 170/182 (93.41%), Postives = 178/182 (97.80%), Query Frame = 0
BLAST of CcUC06G122030 vs. ExPASy TrEMBL
Match: A0A6J1EXR6 (temperature-induced lipocalin-1-like OS=Cucurbita moschata OX=3662 GN=LOC111439165 PE=3 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 2.6e-95 Identity = 171/184 (92.93%), Postives = 176/184 (95.65%), Query Frame = 0
BLAST of CcUC06G122030 vs. ExPASy TrEMBL
Match: A0A5D3BV85 (Temperature-induced lipocalin-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00500 PE=3 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 9.4e-93 Identity = 168/185 (90.81%), Postives = 177/185 (95.68%), Query Frame = 0
BLAST of CcUC06G122030 vs. TAIR 10
Match: AT5G58070.1 (temperature-induced lipocalin ) HSP 1 Score: 285.4 bits (729), Expect = 3.2e-77 Identity = 132/183 (72.13%), Postives = 154/183 (84.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|