CcUC06G121780 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G121780
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Eukaryotic translation initiation factor 6
Location	CicolChr06: 24209210 .. 24213160 (+)
RNA-Seq Expression	CcUC06G121780
Synteny	CcUC06G121780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCTCTCTCTCGCTATCTTATTCGGTTCTCTCCCCTTCGTTCCGTTCACAGCAGGTTCGCCGCCACCGTTAAGTCGCCGCTGTTCGTCCTCGAGCCGCCGCCAAATTCGGTGTTGTGCTGTGAGTAAGTCTTTAAGTGGAGTTTTTGGATTTTTCTTTGATTAATCTTGTTTACCTATTAAATATACGACCTAAAGTATGTGTAAACCTATGAAAACCCGCTTTTTGTCATCAGAAATTAAAGGGCCCACTCATAGAAATGTCAAAATTAGAGCGATCGACTTAAAAATATCTCTAGTATGTAGGGATATTCATGTTCACTTTGCGTCGTTTGTACACTAAAATTGTAGATTCACAAAATCTTCCTAAAGTTGTACAGACCAAGAACACAAAGTGAACACCAATATCCTTACATACTAATAGTGATGTTACGGCAGCTAATTCCTGCTAACAAAAAGTGGGGGTCCACTTTTAAGTTTCGGGTTTAGATTTGAGGTTTTGAGTAGTTTAAGCCCGCTTTCCAGTAATGGTTGGAGCGTTGGGATGTTTCGATAAGTGTTGAGGCTTTCGAACCACCCCTTTTAATGTTGTTCTTTATACCGTGTGTATGAAGGGGAAAAAAAGAGATAAGTAATTGTGATTGCTTGGGGAGCATTTGAAATGTTTTGGTAAGTGTTCAGGCTTCGGAACCCTTTTAATGTTGTTCTTTATACTGTGCACATTACTGGGGACACACAATGGTTCTTTATACAATTATCTCACGTTACTGGGCCCATCTAACTTCCTTTTACTCTGCAGGGGTTGCAAGGGACTTTGAGTTTATCGTTAAGGGAGGTAGTCGTTGATTGTTCGAGGTTATAGTGTGCTACTCATGGCGACCAGTAAGTCTCACCAAGTCTTTCCTTCCATTTCCGTGTATCATCATTTTACATATGTTCTGGTTTCCTCCTTGGCTACTTTTATTGTATGCCTTTTTGAGGATATTCTTTTGGTTTGTGTCAACGTTAATTTTTCTTACATGCTGTGGTTCTTTAGGGCTTATGTTTGAAAATTCTTGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGGTTCTTTCTTTTTCCTTTCCTGTTTCCTGGCTGTGTTTCTGTATCTTTTGAACTGGAAGTAATTTCTCATAAATATTTTCATGTTTAGTACCTTCGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAGCATCGATTGATGGCACTCGCATTATTGGCCGCCTTTGTGCTGGTTTGTAAAACTCACTCACATTTTCTGCATCTTTTAACAAAAGGGTACCCATTAATTATGTGAGGCCCAAACTACTCATCTTCACGTTGACATAACACTGTTTTCATTTCGTACTGCAGGAAACAAAAATGGACTTCTTGTACCACACACCACTACTGACCAAGGCAAGCTTCTTTTCTATCTTGTCATATTACACCTTTAATTTAATAGTTGGGGTGTAGACCTGGAGTACCACATCTCTTTGAATATTTTTGTATCTTTCTTTTATCATGTAAGAGAGTTTTGAATTGGGGGCTAATGAAATTAAAATCAATATGCCCTTCTGTTAAAAATTTTACTTAATGGTCAACTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTGCACTAATGATGTCTCATTCTGGCCTAAGATGATGAAATTGTAAATGGTTACCGCCTTAATCAACAAGAGTCTTGGATTATTGTTATGTCTGATTGCATTGTGATTTTGAATGTCTATTTGGAGGTTCCATTTTGTGGTGTCAGTGAAGCCTAAGTGTTTCTTAGGTAATCCTAGCTGTTACTACCAAATTGATAAGCGTTGTCATCGTTCAACATTTGTAGGTTAACACGCTGGTTGTTGTGTTTTCCACTGCTACCTCTTGTTTCCTTTGTAATATTTTTCTTTGAAGTATCTAAACTCATGACCGTAGTGATCTTTTTTTTTTTTTCTTTTTTTTTTTGCTTTTGTTTTTTCTGTAAACTGTTGGGATACTCCCATTTTATTATTTCTATCTCATAAATGAAATGTTACTATTTCTTATAAAAAATAAAAGAATTTAATATCTTTGTGTGAACATAGGATGAGAAATGTATATGTTTTTTTTAATGAAAAAGAATGAGAAATAAGTTCCCCACATGTTTATGAATATAGCAACTGCATCATTATGCAATAATGAATTCATGTCTTGCACATGATGCCTGAAACTGTAACCATTGTCGTTATTGAATGTGTTGTCTTTATACAACTTACATTAGTGAGGATGCATCATGTAATTAAAATTTGTTCTGACTTGCACAAAACTCTCCTCGATGTTCTTTAATTTATGTTACTAGGTGATATGTGTATGGCCAAATTACTTAACTGGCATTATGTTCCTATTCTTTGCATTTTGAAGAACTTCAGCATTTGAGGAACAGTCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTTTGGGGAATACAATTGCTTGTAACGATCATGTTGCTCTCACACATACTGATCTTGATCGGGTATTTTTTTTATACTTATCCTTCCCACTTTACATTATTCTTCTAGTGTCACTGTCTGCATTACCATCAGATTGTTCAGTTTGCAATCTCTTAAACAGTGTTCTCCCATTTCAATCTGGTCATATCATGTCTCTAATATTATAGTTCCTAGAAAATGTTTACGAAAGAGCGTGTACCTACCTTGGATGCAATAGCTTCTTTTGAGCAGTGGGTAATTTCTAAACTGAGTGTCAATGTTGAGTACATTTCCAAATAAAGACAGGACATTATACAGAATATGGACTCTTTGATTGGTTCTCTTCTTAAAAACAGCATTTTTTTGCATAGTATACATCTGGAACTTTAAATTTGTTTAGTTATGTCATCCATTCCTCTTTTTCAAATTCATTGATCAGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCAGGCAACGTTCTTGTGGGAAGCTACTGTAGTTTCACGAATAGGGGCGGCTTGGTAATATTCACCTTCCATGCTCCTTAACCATGTGTAGTCGCCCTATTGAACTTCATTCCTTCAACCTCATGTAAAAAAATTCCCTGAAAGTTGGAATTGTGCAAATATTCTGCAGGTTCATCCACATACATCTGTTGAAGATTTGGATGAGCTATCCACCCTTCTTCAAGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCTGACACCACTGCCACCGAGTTATCGGTCATTGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGACAGTTATGTGTGAGGCGTCTCTTCTGCTACACCTGGGATCTTGCAAGCAAGGAATTGCTATTACTCTGCTGCCTTTTTCCTTCTGTTATATTTAACTAACTTTGTGAGTATGAAATTCAACTTTGCACTTATAGCGTTTTGATTGAAATTGGGATCCAAATTTGCTATTACAGATGTGTTCTATTTGTGTAACCAAAATTTTG

mRNA sequence

ATGGTTTCTCTCTCTCGCTATCTTATTCGGTTCTCTCCCCTTCGTTCCGTTCACAGCAGGTTCGCCGCCACCGTTAAGTCGCCGCTGTTCGTCCTCGAGCCGCCGCCAAATTCGGTGTTGTGCTGGGTTGCAAGGGACTTTGAGTTTATCGTTAAGGGAGGGCTTATGTTTGAAAATTCTTGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTACCTTCGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAGCATCGATTGATGGCACTCGCATTATTGGCCGCCTTTGTGCTGAACTTCAGCATTTGAGGAACAGTCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTTTGGGGAATACAATTGCTTGTAACGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCAGGCAACGTTCTTGTGGGAAGCTACTGTAGTTTCACGAATAGGGGCGGCTTGGTTCATCCACATACATCTGTTGAAGATTTGGATGAGCTATCCACCCTTCTTCAAGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCTGACACCACTGCCACCGAGTTATCGGTCATTGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGACAGTTATGTGTGAGGCGTCTCTTCTGCTACACCTGGGATCTTGCAAGCAAGGAATTGCTATTACTCTGCTGCCTTTTTCCTTCTGTTATATTTAACTAACTTTGTGAGTATGAAATTCAACTTTGCACTTATAGCGTTTTGATTGAAATTGGGATCCAAATTTGCTATTACAGATGTGTTCTATTTGTGTAACCAAAATTTTG

Coding sequence (CDS)

ATGGTTTCTCTCTCTCGCTATCTTATTCGGTTCTCTCCCCTTCGTTCCGTTCACAGCAGGTTCGCCGCCACCGTTAAGTCGCCGCTGTTCGTCCTCGAGCCGCCGCCAAATTCGGTGTTGTGCTGGGTTGCAAGGGACTTTGAGTTTATCGTTAAGGGAGGGCTTATGTTTGAAAATTCTTGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCTTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTACCTTCGAAACTGAATTAGGTGGTGTCATTCCGGTTGTTAAAGCATCGATTGATGGCACTCGCATTATTGGCCGCCTTTGTGCTGAACTTCAGCATTTGAGGAACAGTCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGACTGTCTGCTTTGGGGAATACAATTGCTTGTAACGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACAGTAGCAGGCAACGTTCTTGTGGGAAGCTACTGTAGTTTCACGAATAGGGGCGGCTTGGTTCATCCACATACATCTGTTGAAGATTTGGATGAGCTATCCACCCTTCTTCAAGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGACTGGACTGCATTTTGTGGTTCTGACACCACTGCCACCGAGTTATCGGTCATTGAGAGCGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGACAGTTATGTGTGA

Protein sequence

MVSLSRYLIRFSPLRSVHSRFAATVKSPLFVLEPPPNSVLCWVARDFEFIVKGGLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCAELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV

Homology

[Close]

BLAST of CcUC06G121780 vs. NCBI nr
Match: XP_038900322.1 (eukaryotic translation initiation factor 6-2 [Benincasa hispida])

HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-117
Identity = 226/241 (93.78%), Postives = 226/241 (93.78%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA
Sbjct: 5   LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG
Sbjct: 125 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
Sbjct: 185 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 244

[Close]

BLAST of CcUC06G121780 vs. NCBI nr
Match: XP_038880643.1 (eukaryotic translation initiation factor 6-2-like [Benincasa hispida])

HSP 1 Score: 429.5 bits (1103), Expect = 2.2e-116
Identity = 224/241 (92.95%), Postives = 224/241 (92.95%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           LMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FETELGGVIPVVKASIDGTRIIGRLCA
Sbjct: 5   LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFETELGGVIPVVKASIDGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG
Sbjct: 125 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAGLTANDW AFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY
Sbjct: 185 TVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 244

[Close]

BLAST of CcUC06G121780 vs. NCBI nr
Match: XP_022147757.1 (eukaryotic translation initiation factor 6-2 [Momordica charantia] >XP_022147758.1 eukaryotic translation initiation factor 6-2 [Momordica charantia])

HSP 1 Score: 424.5 bits (1090), Expect = 7.2e-115
Identity = 220/241 (91.29%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           LMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKASIDGTRIIGRLCA
Sbjct: 5   LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL HTDLDRE
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTDLDRE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAG
Sbjct: 125 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAGLTANDW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSY
Sbjct: 185 TVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSY 244

[Close]

BLAST of CcUC06G121780 vs. NCBI nr
Match: XP_022973842.1 (eukaryotic translation initiation factor 6-2 [Cucurbita maxima] >XP_023512387.1 eukaryotic translation initiation factor 6-2 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023512388.1 eukaryotic translation initiation factor 6-2 isoform X2 [Cucurbita pepo subsp. pepo] >KAG6571328.1 Eukaryotic translation initiation factor 6-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 423.7 bits (1088), Expect = 1.2e-114
Identity = 219/241 (90.87%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           LMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCA
Sbjct: 5   LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVALTHTDLDRE
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTDLDRE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAG
Sbjct: 125 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAGL ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSY
Sbjct: 185 TVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSY 244

[Close]

BLAST of CcUC06G121780 vs. NCBI nr
Match: XP_022931983.1 (eukaryotic translation initiation factor 6-2-like [Cucurbita moschata])

HSP 1 Score: 422.2 bits (1084), Expect = 3.6e-114
Identity = 218/241 (90.46%), Postives = 222/241 (92.12%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           LMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCA
Sbjct: 5   LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVALTHTDLDRE
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTDLDRE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAG
Sbjct: 125 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAGL ANDWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSY
Sbjct: 185 TVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSY 244

[Close]

BLAST of CcUC06G121780 vs. ExPASy Swiss-Prot
Match: Q9M060 (Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana OX=3702 GN=EIF6-2 PE=2 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 2.0e-107
Identity = 195/241 (80.91%), Postives = 215/241 (89.21%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           L FEN+CE+GVFSKLTNAYCLVAIGGSENFYS FE+EL  VIP+VK SI GTRIIGRLCA
Sbjct: 5   LQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRI ERLSALGN IACND+VAL HTDLD+E
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVALAHTDLDKE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTSVEDL+ELSTLLQVPLVAG
Sbjct: 125 TEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPHTSVEDLEELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAG+T NDWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+Y
Sbjct: 185 TVNRGSEVIAAGMTVNDWTSFCGSDTTATELSVIDSIFKLREAQPSSIVDEMRKSLIDTY 244

[Close]

BLAST of CcUC06G121780 vs. ExPASy Swiss-Prot
Match: Q9TU47 (Eukaryotic translation initiation factor 6 OS=Bos taurus OX=9913 GN=EIF6 PE=2 SV=2)

HSP 1 Score: 335.5 bits (859), Expect = 5.8e-91
Identity = 170/237 (71.73%), Postives = 190/237 (80.17%), Query Frame = 0


Query: 57  FENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA-- 116
           FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV ASI G RIIGR+C   
Sbjct: 7   FENNCEIGCFAKLTNSYCLVAIGGSENFYSVFEGELAGTIPVVHASIAGCRIIGRMCVGN 66

Query: 117 -------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETE 176
                        ELQH+RN LPD V ++R++ERLSALGN   CND+VAL H DLDRETE
Sbjct: 67  RHGLLVPNNTTDQELQHIRNCLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETE 126

Query: 177 ELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTV 236
           E++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTV
Sbjct: 127 EILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTV 186

Query: 237 NRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 279
           NRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Sbjct: 187 NRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSLIDS 243

[Close]

BLAST of CcUC06G121780 vs. ExPASy Swiss-Prot
Match: P56537 (Eukaryotic translation initiation factor 6 OS=Homo sapiens OX=9606 GN=EIF6 PE=1 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-90
Identity = 170/237 (71.73%), Postives = 189/237 (79.75%), Query Frame = 0


Query: 57  FENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA-- 116
           FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV ASI G RIIGR+C   
Sbjct: 7   FENNCEIGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMCVGN 66

Query: 117 -------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETE 176
                        ELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H DLDRETE
Sbjct: 67  RHGLLVPNNTTDQELQHIRNSLPDTVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETE 126

Query: 177 ELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTV 236
           E++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTV
Sbjct: 127 EILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTV 186

Query: 237 NRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 279
           NRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EAQPS+I   MR SLIDS
Sbjct: 187 NRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAQPSTIATSMRDSLIDS 243

[Close]

BLAST of CcUC06G121780 vs. ExPASy Swiss-Prot
Match: O55135 (Eukaryotic translation initiation factor 6 OS=Mus musculus OX=10090 GN=Eif6 PE=1 SV=2)

HSP 1 Score: 334.0 bits (855), Expect = 1.7e-90
Identity = 169/237 (71.31%), Postives = 190/237 (80.17%), Query Frame = 0


Query: 57  FENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA-- 116
           FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV ASI G RIIGR+C   
Sbjct: 7   FENNCEVGCFAKLTNAYCLVAIGGSENFYSVFEGELSDAIPVVHASIAGCRIIGRMCVGN 66

Query: 117 -------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETE 176
                        ELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H DLDRETE
Sbjct: 67  RHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETE 126

Query: 177 ELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTV 236
           E++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTV
Sbjct: 127 EILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTV 186

Query: 237 NRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 279
           NRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Sbjct: 187 NRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDS 243

[Close]

BLAST of CcUC06G121780 vs. ExPASy Swiss-Prot
Match: Q3KRD8 (Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6 PE=1 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 4.9e-90
Identity = 168/237 (70.89%), Postives = 189/237 (79.75%), Query Frame = 0


Query: 57  FENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA-- 116
           FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL   IPVV ASI G RIIGR+C   
Sbjct: 7   FENNCEVGCFAKLTNTYCLVAIGGSENFYSVFEGELSDTIPVVHASIAGCRIIGRMCVGN 66

Query: 117 -------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETE 176
                        ELQH+RNSLPD V ++R++ERLSALGN   CND+VAL H DLDRETE
Sbjct: 67  RHGLLVPNNTTDQELQHIRNSLPDSVQIRRVEERLSALGNVTTCNDYVALVHPDLDRETE 126

Query: 177 ELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTV 236
           E++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TS+ED DELS+LLQVPLVAGTV
Sbjct: 127 EILADVLKVEVFRQTVADQVLVGSYCVFSNQGGLVHPKTSIEDQDELSSLLQVPLVAGTV 186

Query: 237 NRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDS 279
           NRGSEVIAAG+  NDW AFCG DTT+TELSV+ESVFKL EA+PS+I   MR SLIDS
Sbjct: 187 NRGSEVIAAGMVVNDWCAFCGLDTTSTELSVVESVFKLNEAKPSTIATSMRDSLIDS 243

[Close]

BLAST of CcUC06G121780 vs. ExPASy TrEMBL
Match: A0A6J1D392 (Eukaryotic translation initiation factor 6 OS=Momordica charantia OX=3673 GN=LOC111016616 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.5e-115
Identity = 220/241 (91.29%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           LMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVKASIDGTRIIGRLCA
Sbjct: 5   LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKASIDGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVAL HTDLDRE
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALAHTDLDRE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAG
Sbjct: 125 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAGLTANDW AFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSY
Sbjct: 185 TVNRGSEVIAAGLTANDWIAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSY 244

[Close]

BLAST of CcUC06G121780 vs. ExPASy TrEMBL
Match: A0A6J1I8L9 (Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111472384 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 6.0e-115
Identity = 219/241 (90.87%), Postives = 223/241 (92.53%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           LMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCA
Sbjct: 5   LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVALTHTDLDRE
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTDLDRE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAG
Sbjct: 125 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAGL ANDWTAFCGSDTTATELSVIESVFKLREAQPSSIV+EMRKSLIDSY
Sbjct: 185 TVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVDEMRKSLIDSY 244

[Close]

BLAST of CcUC06G121780 vs. ExPASy TrEMBL
Match: A0A6J1F0A8 (Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC111438315 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.7e-114
Identity = 218/241 (90.46%), Postives = 222/241 (92.12%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           LMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCA
Sbjct: 5   LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRIQERLSALGNTI+CNDHVALTHTDLDRE
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISCNDHVALTHTDLDRE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAG
Sbjct: 125 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAGL ANDWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSY
Sbjct: 185 TVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSY 244

[Close]

BLAST of CcUC06G121780 vs. ExPASy TrEMBL
Match: A0A6J1L2F0 (Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111499780 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 5.1e-114
Identity = 217/241 (90.04%), Postives = 221/241 (91.70%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           LMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVK SIDGTRIIGRLCA
Sbjct: 5   LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAG
Sbjct: 125 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAGL  NDWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSY
Sbjct: 185 TVNRGSEVIAAGLIVNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSY 244

[Close]

BLAST of CcUC06G121780 vs. ExPASy TrEMBL
Match: A0A6J1G8F7 (Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC111451787 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 5.1e-114
Identity = 217/241 (90.04%), Postives = 221/241 (91.70%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           LMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE EL GVIPVVK SIDGTRIIGRLCA
Sbjct: 5   LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSSFEAELAGVIPVVKTSIDGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAG
Sbjct: 125 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAGL  NDWTAFCGSDTTATELSV+ESVFKLREAQPSSIV+EMRKSLIDSY
Sbjct: 185 TVNRGSEVIAAGLIVNDWTAFCGSDTTATELSVVESVFKLREAQPSSIVDEMRKSLIDSY 244

[Close]

BLAST of CcUC06G121780 vs. TAIR 10
Match: AT3G55620.1 (Translation initiation factor IF6 )

HSP 1 Score: 390.2 bits (1001), Expect = 1.4e-108
Identity = 195/241 (80.91%), Postives = 215/241 (89.21%), Query Frame = 0


Query: 55  LMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA 114
           L FEN+CE+GVFSKLTNAYCLVAIGGSENFYS FE+EL  VIP+VK SI GTRIIGRLCA
Sbjct: 5   LQFENNCEVGVFSKLTNAYCLVAIGGSENFYSAFESELADVIPIVKTSIGGTRIIGRLCA 64

Query: 115 ---------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRE 174
                          ELQHLRNSLPDQVVVQRI ERLSALGN IACND+VAL HTDLD+E
Sbjct: 65  GNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIDERLSALGNCIACNDYVALAHTDLDKE 124

Query: 175 TEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAG 234
           TEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTSVEDL+ELSTLLQVPLVAG
Sbjct: 125 TEEIIADVLGVEVFRQTIAGNILVGSYCALSNKGGMVHPHTSVEDLEELSTLLQVPLVAG 184

Query: 235 TVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSY 281
           TVNRGSEVIAAG+T NDWT+FCGSDTTATELSVI+S+FKLREAQPSSIV+EMRKSLID+Y
Sbjct: 185 TVNRGSEVIAAGMTVNDWTSFCGSDTTATELSVIDSIFKLREAQPSSIVDEMRKSLIDTY 244

[Close]

BLAST of CcUC06G121780 vs. TAIR 10
Match: AT2G39820.1 (Translation initiation factor IF6 )

HSP 1 Score: 300.4 bits (768), Expect = 1.5e-81
Identity = 151/238 (63.45%), Postives = 188/238 (78.99%), Query Frame = 0


Query: 59  NSCEIGVFSKLTNAYCLV-AIGGSENFYSTFETELGGVIPVVKASIDGTRIIGRLCA--- 118
           N+CEIGVFSKLTNAYCLV A   S NF++ +E++L GVIP+V  SI G+  IG LC    
Sbjct: 10  NNCEIGVFSKLTNAYCLVSATSASANFFTGYESKLKGVIPIVTTSIGGSGTIGSLCVGNK 69

Query: 119 ------------ELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEE 178
                       ELQHLR+SLPD+VVVQRI+E + ALGN IACND+VAL H  L+++TEE
Sbjct: 70  NGLLLSHTITDQELQHLRDSLPDEVVVQRIEEPICALGNAIACNDYVALVHPKLEKDTEE 129

Query: 179 LIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVN 238
           +I+DVLGVEV+RQT+A N LVGSYCS +N GG+VH +T+VE++ EL+ L+QVPLVAGTVN
Sbjct: 130 IISDVLGVEVYRQTIANNELVGSYCSLSNNGGMVHSNTNVEEMVELANLVQVPLVAGTVN 189

Query: 239 RGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV 281
           RGS+VI+AGLT NDWTAFCGSDTTA ELSV+ ++FKL ++QP  +  EMRKSLID+YV
Sbjct: 190 RGSQVISAGLTVNDWTAFCGSDTTAVELSVVNNIFKLVQSQPDFVGSEMRKSLIDTYV 247

The following BLAST results are available for this feature:

BLAST of CcUC06G121780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900322.1	1.2e-117	93.78	eukaryotic translation initiation factor 6-2 [Benincasa hispida]	[more]
XP_038880643.1	2.2e-116	92.95	eukaryotic translation initiation factor 6-2-like [Benincasa hispida]	[more]
XP_022147757.1	7.2e-115	91.29	eukaryotic translation initiation factor 6-2 [Momordica charantia] >XP_022147758...	[more]
XP_022973842.1	1.2e-114	90.87	eukaryotic translation initiation factor 6-2 [Cucurbita maxima] >XP_023512387.1 ...	[more]
XP_022931983.1	3.6e-114	90.46	eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]	[more]

BLAST of CcUC06G121780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M060	2.0e-107	80.91	Eukaryotic translation initiation factor 6-2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9TU47	5.8e-91	71.73	Eukaryotic translation initiation factor 6 OS=Bos taurus OX=9913 GN=EIF6 PE=2 SV...	[more]
P56537	1.7e-90	71.73	Eukaryotic translation initiation factor 6 OS=Homo sapiens OX=9606 GN=EIF6 PE=1 ...	[more]
O55135	1.7e-90	71.31	Eukaryotic translation initiation factor 6 OS=Mus musculus OX=10090 GN=Eif6 PE=1...	[more]
Q3KRD8	4.9e-90	70.89	Eukaryotic translation initiation factor 6 OS=Rattus norvegicus OX=10116 GN=Eif6...	[more]

BLAST of CcUC06G121780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D392	3.5e-115	91.29	Eukaryotic translation initiation factor 6 OS=Momordica charantia OX=3673 GN=LOC...	[more]
A0A6J1I8L9	6.0e-115	90.87	Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1F0A8	1.7e-114	90.46	Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1L2F0	5.1e-114	90.04	Eukaryotic translation initiation factor 6 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1G8F7	5.1e-114	90.04	Eukaryotic translation initiation factor 6 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of CcUC06G121780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55620.1	1.4e-108	80.91	Translation initiation factor IF6	[more]
AT2G39820.1	1.5e-81	63.45	Translation initiation factor IF6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002769	Translation initiation factor IF6	SMART	SM00654	eIF6neu2	coord: 55..239 e-value: 9.1E-110 score: 380.6
IPR002769	Translation initiation factor IF6	TIGRFAM	TIGR00323	TIGR00323	coord: 56..259 e-value: 2.8E-69 score: 230.7
IPR002769	Translation initiation factor IF6	PFAM	PF01912	eIF-6	coord: 56..238 e-value: 1.2E-61 score: 207.5
IPR002769	Translation initiation factor IF6	PANTHER	PTHR10784	EUKARYOTIC TRANSLATION INITIATION FACTOR 6	coord: 55..280
IPR002769	Translation initiation factor IF6	HAMAP	MF_00032	eIF_6	coord: 39..280 score: 115.672844
IPR002769	Translation initiation factor IF6	CDD	cd00527	IF6	coord: 57..258 e-value: 7.36728E-110 score: 314.993
None	No IPR available	GENE3D	3.75.10.10		coord: 54..260 e-value: 1.6E-99 score: 333.7
None	No IPR available	PANTHER	PTHR10784:SF8	EUKARYOTIC TRANSLATION INITIATION FACTOR 6	coord: 55..280
None	No IPR available	SUPERFAMILY	55909	Pentein	coord: 57..259

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G121780.1	CcUC06G121780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902626	assembly of large subunit precursor of preribosome
biological_process	GO:0000460	maturation of 5.8S rRNA
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0042256	mature ribosome assembly
biological_process	GO:0000054	ribosomal subunit export from nucleus
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
molecular_function	GO:0043023	ribosomal large subunit binding
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003743	translation initiation factor activity