CcUC06G120810 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G120810
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Phenylalanine--tRNA ligase beta subunit
Location	CicolChr06: 22705333 .. 22718124 (-)
RNA-Seq Expression	CcUC06G120810
Synteny	CcUC06G120810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGGTTTCTGGTTTTGGATTCGAAGTCTGGAGTTGAGAAGCTCAAGTTTGTATAACTTCAAATGATAACCACTCACAATGTTGTTTGATTTATATGCAAAGTTCGAGGTTATTTTAGGACTTTGCAAACACTCAAAAATAAGGTAATTGTACGAATAATTCCAACCAAGAACTTAGTTAAAAAGATGAATAACTCTAAGATCTAACTTATAATCTATGATAGTCGCTCTTAGACCTTACAACAATTCACTCAGATTAAAACTAATCATGTGAATCAGTTTAATCATGATCAAATCTAAAGCAAGATTTGAAAAAAAGAATGAAAAAAAAAAAATACCAAAGAGGTTGAATAAACACAAGGTTTTTAATACCGTTAATTTGAGTTTTGAAGAGCATTATAAGTCATTTTAAAGGTCAAATATAGACGTTTAAAGGTTCAAGAACTCAGAAGTCATTAAAAAATTATAGACAATAAGACCTAGGAAATTGAAACTTATTTAATTTGCATATTAATTGAGAAATCAAAAATGTAAAACTAAAAAGGTAAAAATACTTCAAATAGCCTTAAATAACTCCTCTAGAAGGCAACAAAGTAGATGTGCACATTTGACAAAGTTTGATATCACAAATTTATATGTAGTGCACACTTGACAACACCTTCTTCTTCGCAATTTTTGCATAGTTGTTTTGTGCCCTTGGTGTCATCTTCTAAATTATACAACTTTTGCCATGTCACTTCACTTCATTCTCTTCTATACTCATTGTAATAACATTATATACATCAATTTCGGCTTGAAAATCTTTGTCTTTTCTTGTGCATTAGCTAGCTTAGGAAGATAGTAGTTTGAAAGCTTCTTGAATGTTTTTTGTCTTGCTTCTTGTAATAGTGTCAAACTTAGGACATGACATGTCGATAATAGATCTCAATGAGACTATGAAATTTATTATTTGATCTTATAAAAACTAAACACATTTTAGAAAACATGTGCTAGCAAAAACCTTCATAATGAAAATTTTTAGAAAAATTCGACAGAGTTTACCCTAAAAATTGGATAAACCACACCTGCAAGAAAACTCTTTAAACACTCCCAAAATATTTGCTTTAAATCAACCATAAGGTGTCCCACCACACACTCTTCAATAGAATCCAAATCACAACACTCCAACCACATCATGAAAATTTAAGAAGAGGAAACATACAAGTTTTAGTATACAAACTGTGACAACCCAACTTTTAGCAACCAATGCGTTGAAAAGTCCGAAGGAGAGGAATAAAAGACCATGTTGGACGCATGGTCAAGACTGAAGTAACGCATAGTAAAAGTGGACGTATAGGAAGTACTCAAGCACTTAAAGGGAGAGAAGTAAGACGCATAGACTACTATTATAAGATATTTCTAAGTGTTGGAAAGTAGAAGGTTGTGAAGTAGACATAAAAACTAGAACATGTGTTGGACGCATGCTAATTTATCTAAAAGGAAATAGTTAATATAAGGAAAAGTTTAAAAGAATCACCTTGGAAATAATAAAGGAATGACTAAGGATAGGAAGATGGTCATGGACGCAGGATGGAAGTGAACGCAATAGGACCAACGCATAAAGAAAGAGCTTGAGAAGGATTTGTTGTCGTTGACGCTTAGCGGTATTGTGTAAACACTGGATTGTAATGACGCGACTATACGTTGAAGGTGATCACGAATGGTTGTTGTGAGCTGAAGTAGTCGCCGCGTCGACGGGAGAAGAAATGTATTTGGCTTACCATTCGTTGGTGAGCTTGTTATGGATTGAGGTCCCTATGCGTTGAGACAGTTATCTCTACGTGTCAAAGATGATAGTGTAGTTAGTTAAGAGTTAGACAAGTGAGTAGGAAGCTCAAACCTTAGAGGAAACTCAATGAACGCATGAGGGCGCTGTATGGATTGAATGGCTGTCTATTTGAAAATAATGGACGAATAAGATAAGTTATAAAGGCCAGGTGGCTTCATATAAACTTGACACCTTAAAATAAGGATGTGTTAAAAAGGCATGTTAAGTGTTTCATGCAAGGTAACACTTGGACTAATGCATGGTTAGTCAGACATGCAGAGCGACATATGGCAATCAAGTGGCAAAAGAGGAGTAGGATGGCAAGATCTCTATAAATAGAACCCTGTGGAAAGAGTAACGACTGATGATTCTGAAATAAAAATCCTTGAGAGAAGAAGGAGAATGAAGACAGAAAGAAGGAACCCCTTGCGTTGTAAAAGTAGGTCTGCGGCCAAGAAAGAAGACATTCTTGACAACTTAGTCATCTGGTGTTAAAGAAGTTATCTTGCGTTAAAGAGGGGTCGACCTTGCGTTTGAAATGAATCCAACATTTAAGGTGAACGCGGTGTTCGAAAATAGACGATGCGTTCAAGTTGACCTTGCGTTCAAGAGAAGTCGACGAATCCGAAAGAAATAAGAGGAGTTAGGCTACACTTTGCAGTAGTCATCAACCTTGCGTTGAGGGGCAGGGTTGTGTCCAGCCAAACTGATAGAGGAATGTCAGTCTTGCATTCCAGAGTTAGAATGCTGCAACCAACTAAGCTACCGAGAGTGAAAGTAGCTACCTAGTGGACTAAAAGCTGAAGTCTTGCGTTAAGGAGCTCGCGAAACGGGAATTTGAAAGGAAAAGAGGAAATTCCTTAAGAGATTTGTGAGTGACTCTTTCCTTTCTTCGAAAATGAATTTTATTAAATGTTGTTACGTGGTATGGCTTTAAGATGACTGTTTATGTGAAAAGCATAATGCTTGAATGTATTGTTCAAAAGGCATGTTTTACTTGATTGCTTTATGATAACGAAAGGCATGTTGCAAAATATTATTTATCAAGGAACATCCTGTTTTCTAAAAAAGATTTTGATGAACTATTTATGTAAATTGATGGAGAAAATGTTTTAGAAGAGACTCAATGCTAATAAGGCATGTGAACTTCCCCGGGACCCACTACTTGGGCAACCCGCCATATTCCTATGTGCACATAGAGGTTGAGTTGGCTGGTGCGTCGAATTTTGCTTCGCATCAAGCCAGGGATAATATTGACGTTGAGAGCGTTGAGTTTTTCTCCACCTCAACTAAGGGAAAAGATTGAAATGCCAAACGATGTTCTGATTAATTATTTTGATAAGGATTCCATATGTTTCAGAATGGATTCACGAGATTGACAAAGTTTTGCGGAAGAACTGTTTTGCTTAATTCTTGTTTTATGGGTATTGTTTTGACATGCCTCTGTTTGAACTAAAGATAGTTTTTTTACAAAGCCAGTCACTCACGGAGCTTGTAGCTCACGTTTTCCTATTTTATTTTATTTTTCAGGTAGCAAGCGAGTTCGGGACGCTTTGTCTACGCGAAAACCTCGTCTGGGCTGTTCTTGATGGAAATGGTTGGACAGTGAACCTTACAGAAGAGTCAAGGTTGCTGTCTTCACATCTCTTCTCGGTTTAAGAAAGGATAATCCGGGAGGGGGTGTGACACAAACCATTTGAAATTAAGGATGTCTACTTTAGTTACAAGCCAAAACAATGATATCAAAATACAAATTCAAAAGTTGTGAAATCTAATTGAAGTTGGTGGCAGATCTCTAACACGTGTGGCCGTTGGAACTTCAAACGCTACCTGGTGGAAAATTTAAGAAAAAAAGAATGAGCTAAAAAGCCCTGTGAGTGGTGAGAATTCATAAGAAAATAAGTTTAAACGATCCTCTTCAAATTTTCAATAGAAGTTTGGAATTTTGTAAAATAATGAAAACCATAAACGAATTGAAACTCAAGATAATTAAAACATCTAGAAGTTCCGCATAGGTAACTCTTGAAAATATAGTAATGAGTTGGTAAAACCAATCACCAAATCTATACCAAAATCTCTAGTCAAACTGGCATGAAAAAATCTCAATAGGCACAGTAAAGCAATCTTTAGTCATACTATACATCGAGTAGTCTCAAGATATATAGTAAAGTAATCTCTAGTCATACCATACACCGAGAAATCTCTAAGTACATAGCAGAGATAATCTCTAATAATACTATGAACCGAGTAATCTCTAAGTTACAGCAAAGAGAATCTCTAGTCATATTATGCATTGAGTAATCTCTAGGTACATAGCAGAGCAAATCTCTAGTCATACATATTGTAAGCCCCGTACCTGACATTAGGAGAAGGCAAGTAAGAAGAAACTATGAGATGGGCATTGAGTAAGGAAAATTGGCCGAGTTGTGCGGGAGCAAAGGTGTCTAAGTGTTGGCCATGCATTGGTGTGACTATGCGTTAAGAGTATGTCTGAGGTTTGACGAAAGTTGCCGCTGGTAGCTATGCGTCGAAGAGGGTAGCTCGGCATGGACGCATATGTGAAGGAAGGAGGGTGCGATTGGCGTTGGTGGAAGGATGCGTTGAAGGTTACTATGCGTTAGAAGGTTAGCATTGCTATACGTTGAGAAGGCCTATGCATTGAAGGTTGGTATGCGTTGATGCATAGAAAAGTGGTCTAGAGGACCATACGTTAGTCGGCTATTCGGCGATGGGGCATTAGGCAATTAGTAGCATAGTAAGTTGAAGCTATGCGTTGCTAAAGCCATGCGCCGGAAGGTTTGCGTTGGCCAACCTAAGTAGGAAGACGATGGCAGTGCTGGCGAGTCGGTGATCTATATTGATATATAAGTGAGTGCACTGAATAATTAAACACTTTAGACATATTTTCGAACTCAGATTGATCCCATTTCACAGACGAACAACGAGGAGAGGTGGAAGAAGGTGTTTATATCGAATTTAAGTAGAAACCAAATCATTTTCACGGTGACATTGAAGCTGGAACCAGAAGCTTGATTGTTGTTGATAAATCTGGGCATCATTCGGTATTTGAAGAAGAGTGAGCTGAGGAAGTTGAAGCTAGGACTGAAATTTTGAGGTTAATAAGTTAATGTAATTCTTAACAACTTCCATGAAGGATGTTTAAGCAAAATTCAAGCAAAAATATGTTTAATTCTAGGAGGAAGTAATCGGAGTTGAACTGCTAGATGATTCAAAGCAGCCAAAGTCATTTGAGAATAGTTCTCAAACGAAGAAGAGTTATAGTCTGGAATTTTGAGGTAAGTTAGAAAGCTCACTTCTTTACAAGTTTGTAGAAGAGAGGAAGTTCTGAATTTGGCTGGAATATGATTTTTAGTAGGACAAAGAAAGAGTTAGAAGGGAAGGAAGAAAGCAGTGGTCATCAGGTGTCGCTAAGATAGTGATATCGCTAAAAAAGCTGGAGAGTGAGCAGCGAAACGAGTGTCGCTGGTAACGCAAAGGGCTTTGCGTCTCACAACTCTCGCTGAAGTCTCACTCGGTGTCGCTCCTTAAGGTAATCTTGTTAGTCTTGTTTATTCTAGTCTTGTTAGTGCAGTGTCTTGTTGTGTAATTTCGCTGGTAATCTCGTTGGTGACATAGAGTATCGCTAGTTATGAATATTTTGGAAAAAGGAGAGTCTCGGTGATGGAACGAGAATAGAGTCTAAATATGCATGCTTAATGATCATGGAAAGGAAGTTAAAAAAAAACTTAACGTGAGAAATGTGATTTTACAAGCCAAGAAGAGCTCGGGAAGGCATATAATCCACTCAAGGCCGAGGACAAGTAGTGAGTGACTTCCTGTTTAATATAATGGTTACCCTTAGCATGTTTTATTAGTATTGAGTGAGTGGAAACTATCATATGGTGTAGTTATTGAATATTTGTGTTGTGCTGTAAGTTTAAAGAATGTTATGTGTATTATCTAAATGCAAACCATGGTTGAGGGACCTTGAGTGAATGCTTATGGGAAATACGTTATATTATACTCCGTGTCAAGGGACCACGTGCAATGGCATTGAATAGTTGGTTGCAATGGATTCCAGTGCTCAAGGACCCTGGGTAAAGGCATATGGAAGTCCAATACATGATAGCCAAGTGTTGAGGGACCATGAATGAAGGCACTTGAGCAATGGATTGGTAGGAAACCCAGTGCTGAGGGAACACGAGTGAAGGCACATGGGAATTCCAACATAGTGAAACTCAGTGCTGAGGGACAATATGTGAAGGCACTTGAGAGTTTGAAACGCCGAGGGACGAAATGTGAAGTCATTTGAATATGTTAATAGTGAGAATTGGTTTACGAGGTTAAGGGCGTTGAGCTTTGCTCCGCTACAGCTAGGGAAGGATAATTGTACTACTTTTGTTTTATGGCATAGGTGACTTAGAAATTTCTATTTATATAAATATGTGGTAGTTATTATGATAGATATTAACTCAAAAAGTTCAATAGTAATTAGATAAATTCAGTCACTCACTGGGCTTTAGGCTCACACTTTCTTGTTTGTTCTTTGTTGGTTTCAGGTAGCGAGCGTATCCGGGACGCCTAGCCTACAGAAGATCCTTGTCTGGGCCTACTTTGGATTAGTCCTTTGGGATAGTTGTAATTACACAGTTTACGTACATGTTTTGTTGTCATATATGTTTCTTGGGGTATAGTGAGATTTGATTTTGTAGTGTATATAAAGAACACTTGTTTCGATGAGTTATGATTCTTATGCATCGCATTTGAGCAGTTATGTGTATCTTATGAAGTTATGATGGCATATAGTTAACTATAAATGAGCTGGAGTTGCTTAATGTTATAGTCATACAGGGAACGGGTGTATGTAGGTTCGCACTCACTCCTAGTGGTGAAGGGAATCTGGGAGAGGGTGTGACACATATCATATCCACACTACGGAAATAAATTCTTAAAAAGAAAGTATTTGCTAGCCACCTATTTTGAAAAATGTTTTAGAGTTTGACAATTATGAATTTCATAAAACAATAGGAATCTATTGTCATCATACCGCATCCTAGCTAGGTTTGGTACGGTAACTTGGAGCGGAGTGTGACAAATAACTATTTCGGGTATATGTAATGAATTAATGGTTGGATTCACATCATCATATCGTTGATAATATTATGAGAAAAATACTTGTTTTGGTTGCTATGTTTTGAGTTTAGTTTTCATTTGATCTCTACGCTTTAAAATATTACATATTTAGTTTTTAAGTTTTAAGTATGGTTTCAATTTAATCATAAAAGTTTAAGATGTTACTAACTTTACTCTTAAAATTTGAATTTTGGTTAAGTTGAGTCCCTAATATTATGTTAGCTCACAAGTGTATTAATCACTTCCCTTGATAAAAGGAAACTAGGTAGGAAAGTAGTCAAGCTTAGGTTTGCATCCTTGTTGGGTTTCTTTTGATTATGAATTCCATTACCAACCTTTTCCGTTCTCCTTGATGATAAAAGGTCATTTTTTCCCTCATTGGAGGTTTAATTTCCTTCAAGAGATTCTCTTTCCCTCTCCATCTATTAATTCTTAATTATAACTTTATTGCTCTAAACGTCTCTACCAACTTCTCCATGATGCTAAATCTTTCAACTACTTAACTCTGTTAATTAATTATATATCCAAATCTATGGCTCCATTCTTCCAAATAACAAAAGAAAAAATAATCAACATCTCTTCTAATCTGTATCTTACATACCAAAAATGACTTAAATATAAAAATTAGATTTCCCTATAACTATGTTGAAGTAGGTAAAAAAATATCTTATCAAAACAAATTATGAACAAATATCCTACCGTTTCTTTGGACTCCAAGAAATTCTAGAATTCCTTTAGATATGAATATATTGGTAAAAGTATTTAGATATTTTAGATCCAAGAAGAGCCTAGATTTTATTATTATTAGTATTTTTCTTGGTCTTCAAGGATTTCATGTCTATAAATGAAAGGTGTGTCTCCGTATGTAAGCCAAGTTAGAGAACGCTAGACAAATTTAGAAATTTAGAATAATAAAAATGGAGTGAGTGCAAAAGTCTTCTCTTAAAAGTGTCCATATTTGTACTTTTTTAAAATAAAAGTTTCTTTCTTCCAAAAGTGTTTCTCTCTTTCTTTGTACACCAATTTCTTCAAAATAGTAATAGGGCCAAGCTAGCATAGCTTGCTGTTGCCAAAGCTTCTAAAGATTGGTACAGACTGGGACTACGAAGCTTATTGTCTGGGACGCAACTACTTGTGGAGTGCATTTATTACTATAAGATAATTGAAGACTTTCAAGTTATTGAATGAATCAAGAAATTCAACACTCTAAAGTACAAAATATGATCTACACAAATGAAGTTGTGTATCTTCAAGGCCAAGACTTGTGGAATATATGTCGTGGGAGGCACTAATTGGGAGATAACTATCAATTGGTACTTCAAGAAAGATAAAACTCTATATATTGAAATCTCTAAATTACAACTAGGTAGCTATTTCATAATTGATAATTGAGAATGAGAGGAATTATAATTTATGGTTTTAAACATGAATATAAAAGTTCGACTGGTTTTATTTAAAGTTGGGCAGTTCAACTAGCCTTGAAAATATTCTTGGTAGCCAAGAAGCATGAGTTCATCAGTCACAGTCATATTAAAGAGCATTAGTGAAAATTGCTCTTTAGTGGAAGAAAGAAGAAAATGAAAAAATATAAATAAAAACTTTCTTTAATGGTGTTCAACCAGATTTTCCAGAGAAATTTAATTTGTTGAATGAACTTGTATTTATAAAAATTTTAGTGCTGCGTGTACAGTATTTATTAAATGGTCTTTTAATGCTTTCTCTCGAAAAGTAAACTTACTTTGAGGGATTTGTAGCTTATTCTTAATGTTGATTTGTCTCAAGGGCTTTGCAACTTGTTCTCGAATGTGGATTTATCTCGAGAGCTTTGACAATGTTGATTTATCTTGAGGGTTGTGCAACTTGTTTTTTATGTTGATTTATCTTGAGAGCTTTACAACTTATTCTCGATGTTGATTTATCTCGAGGGCTTTACAGCTTCTTCTCAAACGTGGATTTATCTTGAGGACTTTGCAATTTCTTCTCAATGTTGATTTATCTCAAGAGCTTTACAACTTGTTCTTGAACGTAGATTTATGTAGATATGGTTAGAACCCTAGTATTTGATCATTTGATTCTCTCTATTTGATGCATACATTTGATTTGAAGAAGCAGAATGTAGGAATGTTTTTCAAGTTGAATTCTTGAAAGAATGTTTGTATCTTCAGGAGACTTGTATCTTCAAATGAGTGTTCAACTTTAGGAGTTAGAAAGTTTTGGAGTTAGAAAGTTTTCTGATTGCTGGGAGAATTCTCTCTAGGCTCTCTAGAATCTAAAATTTATGAATAAGGAGAACTCCTCTATTTAGGGATGTTTAAATGACTCAACAACCAAAACAATCTGGACTAACGAACCCAAACGATAAGGGTGGGATTGGATTGAAATATTTCTATTTTTGTTATTAGTCATTTGTTGTAGATAAATTTTAAGTATTTTAAATTAGTTAAATATATAATAATAATAATAATAATAATAATAATAACCCAACCAACCTAAAAGTGTAGGTAATTGGACTTAAGCCCAAATATTAATATCAAATTGAGCCAAATTATTTTATTAGATCAACAATCACGACGAAAACACGTGACATCATCAAAATTTATCTAACTTATACATTTAATTTTGGGACAGATGTCAACTTTTAATTAATCTAAAATTGAATAATTTGTAATTCTATCATAAATTAGACAGTAATTTTGAGATTTGTCCAAAATTTTATGGAAGCAAATACTCTTTTATTAATTTTTGTGAGTACAATTGTGAAAATAGGTGATCACCATCCAACCTCGAAATTAGAATACTATGTCTAAGCTCACTTTGAGATTCTTGTGAGGATGCTTGCTCTTTAGCTCTTCTTCTTAATTTCCCAAGGCAAGCGGAGAACCGCTCTAAGGCTAAAGTGACAGTGTGACACCATCACAATGACCGACATTAATTTCTTCAGTTAGGGCTTCCATTCTCTACGTTTCGATCACTCCAAATGTTACCGACAAGAATCCTGGGAGGTTGCCAGAGAAGAGCGAAGGAGGAGGGAGGGGGGAATTTAATGAAGACCTAATTCAACTTCGTCGAGTTAATAATTTTCGGAAAGACTACATAGATGACTTTGCAAATTCTGCTCGTCTTTTTCAGTAATGTCTTTTCGCATATTCTTCTTCTTCTTCTATGTCATCGATTATATTCTTCTTTTTAGTTAGAGGATAATGTTTGGACCCCCTTTTTCTTGTTTCAAAAGGACTAGAACTTTCCTGCCGACCATTCAATATTCTCCCAAATCTTCACATTGCGATTTGGACCATTGTGTGGATTCGTGTAGTTTATGGGGATAAAAGAATTCTATATTCCAAAAATTATTTGCGAGCCGACAATCCACTCCAATCTGAGATATACTGGAATTGATCATGGGCTACTTTTTTCAGAAGAGCTTCAGATTTAGTTAAAATTGTTACTGAACAGAGGGAAAAGGGATCATAATAGTTAAATCTATGATCTGGAATTTGATATCCCTTAGCCCCAAGTAAAGGTTAGGTTTTGAATCTGATAGAATTGCTAAAGAATGAGATTTGCGGCAGTGATGAGTGGAACTGGCATTACTTTATACATAAAGCATGTTACATTCTCAATCCAAACTGTCGATGATAATGTAGAGTACAGGAGAAGGTTGAAAGGAAAGTCAAAACATTACATAACACTTGGTTTGTTTCTCCTTATAGTGCTCATTAGCATTTCTCTTCAGCCAAGTTGCCATTGACTATGCCATTATTTTGGAAGTCTTTGCTCTTTTGTGGCATATACCAGATTACACATACCAGAAAAGCAACAAAGTTTATGACGCTTAATATGGTCAATAGGCCATAGAAGCAGTCAAGTCTGCCATAATTTATATTGTCTGCAAGCCAGCCTTCTCCATTGTTTCCTGTCACCCTTTTTACAACCGAAACCAAGAAACTACTGATGAAAAACCCGAGTGATAAAGTTGAGAGGAAGAGACCGGTACTCATAGTTTTCATTCCTTTGGGAGATTTGGTTATGAAGAAATCAAGTTGTCCTGTGTATATGAAGGCTTCACCTGAACCCACCAAGAAAAATTGTGGGATCAATAAGAACACACTTATAGGCAGGGTAGCTGTGTCGCCACCGACTGCTTTTGCCACTGCCAGCCTTTTCCTCTCAGCTAGTGCTGCTGCTGTCATTCCAAGTATTGACAGGACAAGGCCTATGGCCATTCTCTGTATGTTTGTGAAACCTGTGAAATAAGAACGTAACTAGTTCAGGACTCTATGAAGTTGTATATACTTGAAGAAATGTTTATAGAATTAGAGATTAGATAGATCTTAAGTTACCTTGTTTTCCTTTCCATTTCTTCCAAAGAGGCATGATAAGACGGTCATAAACACCCAGAGTTATTAGTATGGCTGCTACGAAGAAGACAGTGAGAGAGCCTGCTGGGATTTGGAAAGATCCAATTGATCTTTCCATGGTGGATGCTTGTTGAACTGAGAAAGTGATCATCTGGGCATATGTAGTCCAGAAGATGATGGTTGTGGCCCATATTGGCAGCAGTCTTGCCATCATTTTCACCTCCTCCACTCTCGTCACTGAGCTTAGCTTCCATGGATTTAGCACTGAAACGGCTCCATGCGTCTCAAAATCTCCTTCTGCAACAATAGCTGCCTTGTCCAAGAATCTATACAAAAAGGAATCACAAATCAATTTACTTGAAGAATTCTTTGTGGAAAGATTAATTTCATGAAGTTCACTTGATGTTCCTTTTAAAATCTTGCATATTTAACATTAATCAACTAAACTAAGACTTTAGCAAATAGTCGTTTTTGTATACTATGCCTTTGATTGATAGAATTATTTGAAAATTGTAATTGTAGATTATCAATGAACTTACTGGAATTGTTTTGTGTGCTCAATTTTTGATGCCTGGTCAGAAGATTCCTCATAAAGCAAACCAACATTCTGAGGAAGCTCCAGTTTTCTCTTCTTGATTGCAGCAGCAATGACTTGTACAATATGAACTACAGGGCTCCCCATGCTCTTCTTGTATCTATACTTCTTGGTCCCCGAAAGGAACAACAAAATCGCGACAAGCATCGATGCAGAACAAATCCCATACGCCCAACTCCGACCCACTTCATCTTGAATGTAAACCAGCACTGTGACAGCCATCAAAGTCCCAGTGCTGATAAAGAAGAAGAACCTGTTAAAGAAATAGGCCATTTTAGCTTTTTCCTTCTCATCTGTCTCATCAAACTGGTCTGTTCCGAAACCCGAAATGCTTGATTTTAGGCCACCAGTCCCCAAAGCAATTAGATACAAAGCCAGGTATAGAATTCCCATTTGAAAACCATTTGCTTCCTTGCAGGTTTTGGTGCCATCGCATGGCGGCGGACGAAGCTGTGGCAGTTTTGTTGAAACTGCAAGTGCAGCAGTCCCCTATAGTACGAAATTTTAAACCATTGTTACTTACTATCTTAATCAACAACCACTATACTATTTCTAAAGTTCATTGATTCGATTTTTACTTTGATGAACTTACAAGTGTTTGAATTAAGGCAGAGATGAGAATGGTGTAATATCGGCCAAGGAAAGAATCCGCAAGAAAGCCTCCAAGCAAACAGAGGAGAAAGCAAGTTCCCATAAAATCAGTAACGATGTTGGCTGAAGCCGCACTGGGCAAATGCATTACCCCACCCAAGTACGTCACAAGATTCACTGCTATTCCCATTGTTGACAGCCTTTCACATATTTCAATACCTGAAAATTTAAATTTTGTTATGAAAGCTTTAAGACTTTTTATGATTGAACATTTATTACTACTAATCAAGCTTTTGATTCCTGTC

mRNA sequence

ATGGTTAGGGCTTCCATTCTCTACGTTTCGATCACTCCAAATGTTACCGACAAGAATCCTGGGAGGTTGCCAGAGAAGAGCGAAGGAGGAGGGAGGGGGGAATTTAATGAAGACCTAATTCAACTTCGTCGATGCTCATTAGCATTTCTCTTCAGCCAAGTTGCCATTGACTATGCCATTATTTTGGAAGTCTTTGCTCTTTTGTGGCATATACCAGATTACACATACCAGAAAAGCAACAAACCTTCTCCATTGTTTCCTGTCACCCTTTTTACAACCGAAACCAAGAAACTACTGATGAAAAACCCGAGTGATAAAGTTGAGAGGAAGAGACCGGTACTCATAGTTTTCATTCCTTTGGGAGATTTGGTTATGAAGAAATCAAGTTGTCCTGTGTATATGAAGGCTTCACCTGAACCCACCAAGAAAAATTGTGGGATCAATAAGAACACACTTATAGGCAGGGTAGCTGTGTCGCCACCGACTGCTTTTGCCACTGCCAGCCTTTTCCTCTCAGCTAGTGCTGCTGCTGTCATTCCAATCCAGAAGATGATGGTTGTGGCCCATATTGGCAGCAGTCTTGCCATCATTTTCACCTCCTCCACTCTCGTCACTGAGCTTAGCTTCCATGGATTTAGCACTGAAACGGCTCCATGCGTCTCAAAATCTCCTTCTGCAACAATAGCTGCCTTAAGATTCCTCATAAAGCAAACCAACATTCTGAGGAAGCTCCAGTTTTCTCTTCTTGATTGCAGCAGCAATGACTTGTACAATATGAACTACAGGGCTCCCCATGCTCTTCTTGTATCTATACTTCTTGGTCCCCGAAAGGAACAACAAAATCGCGACAAGCATCGATGCAGAACAAATCCCATACGCCCAACTCCGACCCACTTCATCTTGAATGTAAACCAGCACTGTGACAGCCATCAAAGTCCCAGTGCTGATAAAGAAGAAGAACCTGTTAAAGAAATAGGCCATTTTAGCTTTTTCCTTCTCATCTGTCTCATCAAACTGGTTTTGGTGCCATCGCATGGCGGCGGACGAAGCTGTGGCAGTTTTGTTGAAACTGCAAGTGCAGCAGTCCCCTATAGCAGAGATGAGAATGGTGTAATATCGGCCAAGGAAAGAATCCGCAAGAAAGCCTCCAAGCAAACAGAGGAGAAAGCAAGTTCCCATAAAATCAGTAACGATGTTGGCTGAAGCCGCACTGGGCAAATGCATTACCCCACCCAAGTACGTCACAAGATTCACTGCTATTCCCATTGTTGACAGCCTTTCACATATTTCAATACCTGAAAATTTAAATTTTGTTATGAAAGCTTTAAGACTTTTTATGATTGAACATTTATTACTACTAATCAAGCTTTTGATTCCTGTC

Coding sequence (CDS)

ATGGTTAGGGCTTCCATTCTCTACGTTTCGATCACTCCAAATGTTACCGACAAGAATCCTGGGAGGTTGCCAGAGAAGAGCGAAGGAGGAGGGAGGGGGGAATTTAATGAAGACCTAATTCAACTTCGTCGATGCTCATTAGCATTTCTCTTCAGCCAAGTTGCCATTGACTATGCCATTATTTTGGAAGTCTTTGCTCTTTTGTGGCATATACCAGATTACACATACCAGAAAAGCAACAAACCTTCTCCATTGTTTCCTGTCACCCTTTTTACAACCGAAACCAAGAAACTACTGATGAAAAACCCGAGTGATAAAGTTGAGAGGAAGAGACCGGTACTCATAGTTTTCATTCCTTTGGGAGATTTGGTTATGAAGAAATCAAGTTGTCCTGTGTATATGAAGGCTTCACCTGAACCCACCAAGAAAAATTGTGGGATCAATAAGAACACACTTATAGGCAGGGTAGCTGTGTCGCCACCGACTGCTTTTGCCACTGCCAGCCTTTTCCTCTCAGCTAGTGCTGCTGCTGTCATTCCAATCCAGAAGATGATGGTTGTGGCCCATATTGGCAGCAGTCTTGCCATCATTTTCACCTCCTCCACTCTCGTCACTGAGCTTAGCTTCCATGGATTTAGCACTGAAACGGCTCCATGCGTCTCAAAATCTCCTTCTGCAACAATAGCTGCCTTAAGATTCCTCATAAAGCAAACCAACATTCTGAGGAAGCTCCAGTTTTCTCTTCTTGATTGCAGCAGCAATGACTTGTACAATATGAACTACAGGGCTCCCCATGCTCTTCTTGTATCTATACTTCTTGGTCCCCGAAAGGAACAACAAAATCGCGACAAGCATCGATGCAGAACAAATCCCATACGCCCAACTCCGACCCACTTCATCTTGAATGTAAACCAGCACTGTGACAGCCATCAAAGTCCCAGTGCTGATAAAGAAGAAGAACCTGTTAAAGAAATAGGCCATTTTAGCTTTTTCCTTCTCATCTGTCTCATCAAACTGGTTTTGGTGCCATCGCATGGCGGCGGACGAAGCTGTGGCAGTTTTGTTGAAACTGCAAGTGCAGCAGTCCCCTATAGCAGAGATGAGAATGGTGTAATATCGGCCAAGGAAAGAATCCGCAAGAAAGCCTCCAAGCAAACAGAGGAGAAAGCAAGTTCCCATAAAATCAGTAACGATGTTGGCTGA

Protein sequence

MVRASILYVSITPNVTDKNPGRLPEKSEGGGRGEFNEDLIQLRRCSLAFLFSQVAIDYAIILEVFALLWHIPDYTYQKSNKPSPLFPVTLFTTETKKLLMKNPSDKVERKRPVLIVFIPLGDLVMKKSSCPVYMKASPEPTKKNCGINKNTLIGRVAVSPPTAFATASLFLSASAAAVIPIQKMMVVAHIGSSLAIIFTSSTLVTELSFHGFSTETAPCVSKSPSATIAALRFLIKQTNILRKLQFSLLDCSSNDLYNMNYRAPHALLVSILLGPRKEQQNRDKHRCRTNPIRPTPTHFILNVNQHCDSHQSPSADKEEEPVKEIGHFSFFLLICLIKLVLVPSHGGGRSCGSFVETASAAVPYSRDENGVISAKERIRKKASKQTEEKASSHKISNDVG

Homology

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BLAST of CcUC06G120810 vs. NCBI nr
Match: CAA7408874.1 (unnamed protein product [Spirodela intermedia])

HSP 1 Score: 90.1 bits (222), Expect = 4.6e-14
Identity = 73/189 (38.62%), Postives = 81/189 (42.86%), Query Frame = 0


Query: 98  LLMKNPSDKVERKRPVLIVFIPLGDLVMKKSSCPVYMKASPEPTKKNCGINKNTLIGR-V 157
           LL K PSD VERKRPVL VFIPLG+           M ASP PT+KNCGI+  TL+G   
Sbjct: 2   LLTKKPSDSVERKRPVLTVFIPLGE----------RMNASPAPTRKNCGISAKTLMGSGP 61

Query: 158 AVSPPTAFATASLFLSASAAAVIP------------------------------------ 213
              PPT +ATAS   S +AAA +P                                    
Sbjct: 62  PPPPPTLWATASRITSTTAAATMPAVDRISPSPINCKSVNPATSGINSLNTQHSFTVIRI 121

[Close]

BLAST of CcUC06G120810 vs. NCBI nr
Match: OAY81728.1 (hypothetical protein ACMD2_20683 [Ananas comosus])

HSP 1 Score: 88.6 bits (218), Expect = 1.3e-13
Identity = 52/96 (54.17%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 84  PLFPVTLFTTETKKLLMKNPSDKVERKRPVLIVFIPLGDLVMKKSSCPVYMKASPEPTKK 143
           P  PVTL T +T   L KNPS+ V R  PVL+VFIP G    KKSSCP+Y+KASP PT+K
Sbjct: 58  PPLPVTLCTIDTSTELTKNPSESVLRNNPVLMVFIPFGHSRKKKSSCPMYVKASPAPTRK 117

Query: 144 NCGINKNTLIGRVAVSPPTAFATASLFLSASAAAVI 180
           NCGI++NTL  R+  S     AT    +S  AAA I
Sbjct: 118 NCGISQNTL-SRIVESFGLDRATFRRLISVRAAAAI 152

[Close]

BLAST of CcUC06G120810 vs. NCBI nr
Match: RWW28438.1 (hypothetical protein GW17_00007083 [Ensete ventricosum])

HSP 1 Score: 82.4 bits (202), Expect = 9.6e-12
Identity = 44/66 (66.67%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 116 VFIPLGDLVMKKSSCPVYMKASPEPTKKNCGINKNTLIGRVAVSPPTAFATASLFLSASA 175
           VFIP GD VMKKSSCPVYM ASP PT +NCGIN  TL+G V V    + AT S F SASA
Sbjct: 87  VFIPFGDRVMKKSSCPVYMNASPAPTNRNCGINVKTLMGSVVVPLGASRATESRFTSASA 146

Query: 176 AAVIPI 182
           AA IP+
Sbjct: 147 AATIPM 152

[Close]

BLAST of CcUC06G120810 vs. NCBI nr
Match: CAA2632558.1 (unnamed protein product [Spirodela intermedia])

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-10
Identity = 66/171 (38.60%), Postives = 74/171 (43.27%), Query Frame = 0


Query: 98  LLMKNPSDKVERKRPVLIVFIPLGDLVMKKSSCPVYMKASPEPTKKNCGINKNT------ 157
           LL K PSD VERKRPVL VFIPLG+           M ASP PT+KNCGI+  T      
Sbjct: 2   LLTKKPSDSVERKRPVLTVFIPLGE----------RMNASPAPTRKNCGISAKTRITSTT 61

Query: 158 ------LIGRVAVSP-------PTAFATASLFLSASAAAV-------------------- 213
                  + R++ SP       P      SL    S   +                    
Sbjct: 62  AAATMPAVDRISPSPINCKSVNPATSGINSLNTQHSFTVIRIAPTKKTVSDPAGISKWPI 121

[Close]

BLAST of CcUC06G120810 vs. NCBI nr
Match: GER28030.1 (phenylalanine--tRNA ligase beta subunit, partial [Striga asiatica])

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-10
Identity = 46/93 (49.46%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 87  PVTLFTTETKKLLMKNPSDKVERKRPVLIVFIPLGDLVMKKSSCPVYMKASPEPTKKNCG 146
           P TL TT T+  L KNP+D V +K PVLIVFIP G  + KKSSCP+Y+ ASP+PT  NCG
Sbjct: 44  PATLCTTLTRTELTKNPNDSVLKKSPVLIVFIPPGHSLRKKSSCPMYVSASPDPTSTNCG 103

Query: 147 INKNTLIGRVAVSPPTAFATASLFLSASAAAVI 180
            ++ TL          ++A   L  S SAAA +
Sbjct: 104 TSQKTL----------SWARRCLRTSVSAAAAM 126

[Close]

BLAST of CcUC06G120810 vs. ExPASy TrEMBL
Match: A0A7I8LI44 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_15019552 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-14
Identity = 73/189 (38.62%), Postives = 81/189 (42.86%), Query Frame = 0


Query: 98  LLMKNPSDKVERKRPVLIVFIPLGDLVMKKSSCPVYMKASPEPTKKNCGINKNTLIGR-V 157
           LL K PSD VERKRPVL VFIPLG+           M ASP PT+KNCGI+  TL+G   
Sbjct: 2   LLTKKPSDSVERKRPVLTVFIPLGE----------RMNASPAPTRKNCGISAKTLMGSGP 61

Query: 158 AVSPPTAFATASLFLSASAAAVIP------------------------------------ 213
              PPT +ATAS   S +AAA +P                                    
Sbjct: 62  PPPPPTLWATASRITSTTAAATMPAVDRISPSPINCKSVNPATSGINSLNTQHSFTVIRI 121

[Close]

BLAST of CcUC06G120810 vs. ExPASy TrEMBL
Match: A0A199VXL9 (Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_20683 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 6.5e-14
Identity = 52/96 (54.17%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 84  PLFPVTLFTTETKKLLMKNPSDKVERKRPVLIVFIPLGDLVMKKSSCPVYMKASPEPTKK 143
           P  PVTL T +T   L KNPS+ V R  PVL+VFIP G    KKSSCP+Y+KASP PT+K
Sbjct: 58  PPLPVTLCTIDTSTELTKNPSESVLRNNPVLMVFIPFGHSRKKKSSCPMYVKASPAPTRK 117

Query: 144 NCGINKNTLIGRVAVSPPTAFATASLFLSASAAAVI 180
           NCGI++NTL  R+  S     AT    +S  AAA I
Sbjct: 118 NCGISQNTL-SRIVESFGLDRATFRRLISVRAAAAI 152

[Close]

BLAST of CcUC06G120810 vs. ExPASy TrEMBL
Match: A0A444G0P2 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00007083 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.7e-12
Identity = 44/66 (66.67%), Postives = 48/66 (72.73%), Query Frame = 0


Query: 116 VFIPLGDLVMKKSSCPVYMKASPEPTKKNCGINKNTLIGRVAVSPPTAFATASLFLSASA 175
           VFIP GD VMKKSSCPVYM ASP PT +NCGIN  TL+G V V    + AT S F SASA
Sbjct: 87  VFIPFGDRVMKKSSCPVYMNASPAPTNRNCGINVKTLMGSVVVPLGASRATESRFTSASA 146

Query: 176 AAVIPI 182
           AA IP+
Sbjct: 147 AATIPM 152

[Close]

BLAST of CcUC06G120810 vs. ExPASy TrEMBL
Match: A0A5A7P5H1 (Phenylalanine--tRNA ligase beta subunit (Fragment) OS=Striga asiatica OX=4170 GN=STAS_03783 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.7e-11
Identity = 46/93 (49.46%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 87  PVTLFTTETKKLLMKNPSDKVERKRPVLIVFIPLGDLVMKKSSCPVYMKASPEPTKKNCG 146
           P TL TT T+  L KNP+D V +K PVLIVFIP G  + KKSSCP+Y+ ASP+PT  NCG
Sbjct: 44  PATLCTTLTRTELTKNPNDSVLKKSPVLIVFIPPGHSLRKKSSCPMYVSASPDPTSTNCG 103

Query: 147 INKNTLIGRVAVSPPTAFATASLFLSASAAAVI 180
            ++ TL          ++A   L  S SAAA +
Sbjct: 104 TSQKTL----------SWARRCLRTSVSAAAAM 126

[Close]

BLAST of CcUC06G120810 vs. ExPASy TrEMBL
Match: A0A7I8JNN0 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_15018164 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.7e-11
Identity = 66/171 (38.60%), Postives = 74/171 (43.27%), Query Frame = 0


Query: 98  LLMKNPSDKVERKRPVLIVFIPLGDLVMKKSSCPVYMKASPEPTKKNCGINKNT------ 157
           LL K PSD VERKRPVL VFIPLG+           M ASP PT+KNCGI+  T      
Sbjct: 2   LLTKKPSDSVERKRPVLTVFIPLGE----------RMNASPAPTRKNCGISAKTRITSTT 61

Query: 158 ------LIGRVAVSP-------PTAFATASLFLSASAAAV-------------------- 213
                  + R++ SP       P      SL    S   +                    
Sbjct: 62  AAATMPAVDRISPSPINCKSVNPATSGINSLNTQHSFTVIRIAPTKKTVSDPAGISKWPI 121

The following BLAST results are available for this feature:

BLAST of CcUC06G120810 vs. NCBI nr


Match Name	E-value	Identity	Description
CAA7408874.1	4.6e-14	38.62	unnamed protein product [Spirodela intermedia]	[more]
OAY81728.1	1.3e-13	54.17	hypothetical protein ACMD2_20683 [Ananas comosus]	[more]
RWW28438.1	9.6e-12	66.67	hypothetical protein GW17_00007083 [Ensete ventricosum]	[more]
CAA2632558.1	1.4e-10	38.60	unnamed protein product [Spirodela intermedia]	[more]
GER28030.1	1.4e-10	49.46	phenylalanine--tRNA ligase beta subunit, partial [Striga asiatica]	[more]

BLAST of CcUC06G120810 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G120810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7I8LI44	2.2e-14	38.62	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_15019552 PE=4 SV...	[more]
A0A199VXL9	6.5e-14	54.17	Uncharacterized protein OS=Ananas comosus OX=4615 GN=ACMD2_20683 PE=4 SV=1	[more]
A0A444G0P2	4.7e-12	66.67	Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00007083 PE=4 SV=1	[more]
A0A5A7P5H1	6.7e-11	49.46	Phenylalanine--tRNA ligase beta subunit (Fragment) OS=Striga asiatica OX=4170 GN...	[more]
A0A7I8JNN0	6.7e-11	38.60	Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_15018164 PE=4 SV...	[more]

BLAST of CcUC06G120810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 372..400

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G120810.1	CcUC06G120810.1	mRNA