CcUC06G120740 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G120740
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribosome biogenesis regulatory protein
Location	CicolChr06: 22637054 .. 22639896 (-)
RNA-Seq Expression	CcUC06G120740
Synteny	CcUC06G120740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACCCAGCAGCAAGTTCACGTCGACATTGCTCATCTCATGGCGCTCAATCCTCACCACAATCTTATCTCCCCGCCGTCCTCTAGGTTAGTCTCTTCCCCTTCCGACAATCTCTTCTGCAGAGCACGTCTACATCAGCTGTAGTTGCTACATGGATTAGGTTCCCATTGTTTCGGAAGTTTTTTTTCTCTGAATTCAATGGGACTTTTCGTTTGAGTTTCTGGTACTGCCCTTCGTTTCTCTTGGTTGACATCTTTGAACCGGATATTGGCGTTGAGGAACAATGCCTGGAAATTCTGTATATTTGGTTATTATTGACTGTGTTTCGACAAATTACTGAAAACATGTTATCGAGAAGAATTCGATAATTAGAGAAAACTGTGATGTACTCGATATCTGAACCTACCATCTTTGAGGGTTTTAGTTGTTTAGAATAGGTTAAATTACAAATTTGGTTCGGAGAAAATTAGAATTTAGTTAGTCCCTATGGTTTGATAAAACCTCTTATAATAGTCTATAGGGTTAGACTATTTCTGAGAATATTATCAAACAAATTCTGTGGGGACTGATTAAATTCTAAATTTTAAAACTATTGGGACTAAATTCTATACATTTTAAAATGGTAGGACCCAATTTGGCCTTTAGAATTAAGTACATTATTTATACACATTGGCGCATACATACATATTTATGTTATTTGAAGAGAATCTTTACTGTTTTTGGTTTGTAACTTTTATAATTACAGGGAGGAGTTAGTGAATGAATGCATACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATAAACTTTTCTTCCTGCCCCCAACTGAAGCCAAAGATGGTCTTCTAGTGGAGTTGCCTCCACCTAAAACAAGATTGCCTAGGGAGAAGCATGTAAGCCCTTTAATATTTAATTTTTTGTTGATCTTCTCATTGTCGCTTTTAAACTTTGGATGTTCACATTTTTGGTTGATGTAACTATTTTCTTGCTTTCCAGCTTCCAAAGCCTAAGCCTCCTACAAAATGGGAACTTTTTGCTAAAAAAAAAGGTCGGCCATTTTTGTTCTGGTTTCATCTGTTTTGGTGCTGTTCTGTTTTGCATTGAAATATTCATATTTCCAACCATTTAATTGTGTGGCTTGAATTGAATCGAGCTGAAAGGCTGACTTGCTGTAAAGGAAAAACTGGTAAAAAGAGGAGAGGCACAATCCAGTCAAATACAAGACTTTGGAATTGGGAGTTTCTTGGGTGGAATTTAATTTTTAGTACTTTGCGACTTTTGCAGGTATAAAGATCATTAAAAAAACTAAGCATGTGTTTGATAAAAATACTCACACATGGAAGCGTTGCTATGGTTATGATCGTGCAAATGATGAGAAGAACATACCCATCCTTAAGTCCAAGATGACTGATGGTATGGTATTGTTTAATATAATAACCTTGCATTTTAATATGAGCCACGTTTCTTTTTGTTAGTTATATGTCTTTTTATCTTACTCTACGTGTTGTCAAATTTCTGAACATGATAACTTTGACAGAGATAATTTGAATATTGATTATTTATATTACTTGCCATCCATGCTCAATTAATACAAATCTCAAAATGTTCATTAAGTGTCATGCTTTTTGTTGCAGAGCCGGGCGTGGATCCCTTTGCCGAGAGGCGAGCAAAAAAGAGGCAACGAATTGAAAAGCGAGAAAAGAATCGCTTACAGAATCTGAAACAAGCTGCAAAAATGGGTGCTTTGCCAAGGTTTTACCCTCTTGTCGCAGTTATTGGATGTTGGTCAAGTAACTAGATAAAATCTCCTCACTTTGCAGACCTTCATTTTCCTTTTCTCCTTCCCTCTGGTACAAGAATATTATAGCATGCTAATGCATACATTTGGGTCATTGAATTTCATCGATAATGTCGGGTGGATTATTTGACCACAAATTGTACCAGTTTAACCCATTGATTTGTGCCATTCGTTTCCGAAAATATCATATTGTCTTAACTCCGTCTTTTGATTTTCATCATTTTTCTGTTGTATATAACCAAGTTGATTAAACTCATGCAGCCATGTTCTACTAGCTGCAACTGCTTTGCCCATAACAGGGACACAAGCTGCAACAAAGAAAATCAGAAAAGATGAGCTTGGAAATGTGGCTGGAATGGCTGCAACCGCAACGGCTGGTGGTGGAAAATTCGACAAGAAGTTGCCTGGGGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGGTTAGCTAAACAAACCTTTTCCATGGATTCACTTCAAAAACATATAACAATCCTTCTCCTTGGCATGCTGGGGTATATTATATACTATCACAAAGTTACTATTTTGTCATTCATTTATATGCAGTTTTTGCCTGTTGTGGAAGGAACGGGTGTTGGGTCTCAAGAAAAGGAGCAAACTGAGAAAGTCCTGAACCGACTAATATCCAAGAATTCACATGAGATACTAAACATCAATAAGGTCTTTGTTGAAATTAATCATCATTGAAATTTGTCTAATGGTCTTCACTAATTATGCTAATTATAGGCTGTCAATCTGTGCAATGTGAAAGGAGAAAAGAAGCGAACACATGAACGTAGAAAGCCCTCATCATCAACATCGAGCAAGTTGAAACCAAATAAGATACTTCAAAAGAAGTCACTGAAGAAGGGAAAGGCAAACTGAAGTTAATCTCAGTATTTTATTTAGGGTTTTTTGTTCTACGCTATCTTCTTTATGCAAGAAATTTTGCATTTGGCTACCTATTAGTTATCTTCTCCATTTAAAGAACTAGAACTAGTTATTTAGCACGTGCAAAAAAGCACGCTTATATATTC

mRNA sequence

ATGGAGACCCAGCAGCAAGTTCACGTCGACATTGCTCATCTCATGGCGCTCAATCCTCACCACAATCTTATCTCCCCGCCGTCCTCTAGGTTAGTCTCTTCCCCTTCCGACAATCTCTTCTGCAGAGCACGTCTACATCAGCTGGAGGAGTTAGTGAATGAATGCATACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATAAACTTTTCTTCCTGCCCCCAACTGAAGCCAAAGATGGTCTTCTAGTGGAGTTGCCTCCACCTAAAACAAGATTGCCTAGGGAGAAGCATCTTCCAAAGCCTAAGCCTCCTACAAAATGGGAACTTTTTGCTAAAAAAAAAGGTCGGCCATTTTTGTTCTGGTTTCATCTGTTTTGGTGCTGTATAAAGATCATTAAAAAAACTAAGCATGTGTTTGATAAAAATACTCACACATGGAAGCGTTGCTATGGTTATGATCGTGCAAATGATGAGAAGAACATACCCATCCTTAAGTCCAAGATGACTGATGAGCCGGGCGTGGATCCCTTTGCCGAGAGGCGAGCAAAAAAGAGGCAACGAATTGAAAAGCGAGAAAAGAATCGCTTACAGAATCTGAAACAAGCTGCAAAAATGGGTGCTTTGCCAAGCCATGTTCTACTAGCTGCAACTGCTTTGCCCATAACAGGGACACAAGCTGCAACAAAGAAAATCAGAAAAGATGAGCTTGGAAATGTGGCTGGAATGGCTGCAACCGCAACGGCTGGTGGTGGAAAATTCGACAAGAAGTTGCCTGGGGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACGGGTGTTGGGTCTCAAGAAAAGGAGCAAACTGAGAAAGTCCTGAACCGACTAATATCCAAGAATTCACATGAGATACTAAACATCAATAAGGCTGTCAATCTGTGCAATGTGAAAGGAGAAAAGAAGCGAACACATGAACGTAGAAAGCCCTCATCATCAACATCGAGCAAGTTGAAACCAAATAAGATACTTCAAAAGAAGTCACTGAAGAAGGGAAAGGCAAACTGAAGTTAATCTCAGTATTTTATTTAGGGTTTTTTGTTCTACGCTATCTTCTTTATGCAAGAAATTTTGCATTTGGCTACCTATTAGTTATCTTCTCCATTTAAAGAACTAGAACTAGTTATTTAGCACGTGCAAAAAAGCACGCTTATATATTC

Coding sequence (CDS)

ATGGAGACCCAGCAGCAAGTTCACGTCGACATTGCTCATCTCATGGCGCTCAATCCTCACCACAATCTTATCTCCCCGCCGTCCTCTAGGTTAGTCTCTTCCCCTTCCGACAATCTCTTCTGCAGAGCACGTCTACATCAGCTGGAGGAGTTAGTGAATGAATGCATACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATAAACTTTTCTTCCTGCCCCCAACTGAAGCCAAAGATGGTCTTCTAGTGGAGTTGCCTCCACCTAAAACAAGATTGCCTAGGGAGAAGCATCTTCCAAAGCCTAAGCCTCCTACAAAATGGGAACTTTTTGCTAAAAAAAAAGGTCGGCCATTTTTGTTCTGGTTTCATCTGTTTTGGTGCTGTATAAAGATCATTAAAAAAACTAAGCATGTGTTTGATAAAAATACTCACACATGGAAGCGTTGCTATGGTTATGATCGTGCAAATGATGAGAAGAACATACCCATCCTTAAGTCCAAGATGACTGATGAGCCGGGCGTGGATCCCTTTGCCGAGAGGCGAGCAAAAAAGAGGCAACGAATTGAAAAGCGAGAAAAGAATCGCTTACAGAATCTGAAACAAGCTGCAAAAATGGGTGCTTTGCCAAGCCATGTTCTACTAGCTGCAACTGCTTTGCCCATAACAGGGACACAAGCTGCAACAAAGAAAATCAGAAAAGATGAGCTTGGAAATGTGGCTGGAATGGCTGCAACCGCAACGGCTGGTGGTGGAAAATTCGACAAGAAGTTGCCTGGGGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACGGGTGTTGGGTCTCAAGAAAAGGAGCAAACTGAGAAAGTCCTGAACCGACTAATATCCAAGAATTCACATGAGATACTAAACATCAATAAGGCTGTCAATCTGTGCAATGTGAAAGGAGAAAAGAAGCGAACACATGAACGTAGAAAGCCCTCATCATCAACATCGAGCAAGTTGAAACCAAATAAGATACTTCAAAAGAAGTCACTGAAGAAGGGAAAGGCAAACTGA

Protein sequence

METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGTELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFLFWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAERRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNVAGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISKNSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKAN

Homology

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BLAST of CcUC06G120740 vs. NCBI nr
Match: XP_022961058.1 (ribosome biogenesis regulatory protein homolog [Cucurbita moschata])

HSP 1 Score: 481.9 bits (1239), Expect = 4.8e-132
Identity = 261/354 (73.73%), Postives = 289/354 (81.64%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA NPHH+  SPPSSR                  EELVNEC+QKGT
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIAN+LF LP TE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           R+  KR+R+EK+E NRLQNLKQAAK+GALPSHV LAATALPITGTQAATKKI KDELGNV
Sbjct: 181 RQENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQAATKKITKDELGNV 240

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AGMAATATA GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKA 355
           NSHEILNINKAVN+ NVK EK+R H+ RKPSSSTSSKLKPNK LQKK LKKG +
Sbjct: 301 NSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKPNKKLQKKPLKKGSS 323

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BLAST of CcUC06G120740 vs. NCBI nr
Match: XP_023515967.1 (ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515969.1 ribosome biogenesis regulatory protein homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 479.9 bits (1234), Expect = 1.8e-131
Identity = 259/354 (73.16%), Postives = 288/354 (81.36%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA NPHH+  SPPSSR                  EELVNEC+QKGT
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIAN+LF LP TE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           R+  KR+R+EK+E NRLQNLKQAAK+GALPSHV LAATALPITGTQA TKKI KDELGNV
Sbjct: 181 RQENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQATTKKITKDELGNV 240

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AGMAATATA GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKA 355
           NSHEILN+NKAVN+ NVK EK+R H+ RKPSSSTSSKLKPNK LQKK LKKG +
Sbjct: 301 NSHEILNVNKAVNMYNVKREKRRKHDDRKPSSSTSSKLKPNKKLQKKPLKKGSS 323

[Close]

BLAST of CcUC06G120740 vs. NCBI nr
Match: XP_022144805.1 (ribosome biogenesis regulatory protein homolog [Momordica charantia])

HSP 1 Score: 477.2 bits (1227), Expect = 1.2e-130
Identity = 256/355 (72.11%), Postives = 289/355 (81.41%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           ME QQQ+ VD+ HLMA NPHH+L SPPSSR                  EELVNEC+QKGT
Sbjct: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIAN+LF LP TE +DG LV LPPPKTRLPREKHLPKPKPPTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRG---- 120

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K  +D+ T TWKR +GYDRANDE+NIPI+++KMTDEPG+DPFAE
Sbjct: 121 ---------IKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAE 180

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           R++ KR+R+EK+E NRLQNLKQAAK+GALPSHV LAATALPITGTQ A KK+ KDELGNV
Sbjct: 181 RQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKKMTKDELGNV 240

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AGMAATATA GGKFD+KL GEKPPKH+GKYRKFLPVVEGTGVGS+E+EQTE VLNRLISK
Sbjct: 241 AGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISK 300

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKAN 356
           NSHEILN+NKA+N+ NVK EK+R H+  KPSSSTSSKLKPNK  QKKS+KKG +N
Sbjct: 301 NSHEILNVNKAINMYNVKREKRRKHD-GKPSSSTSSKLKPNKKPQKKSMKKGVSN 323

[Close]

BLAST of CcUC06G120740 vs. NCBI nr
Match: KAG6589856.1 (Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 476.5 bits (1225), Expect = 2.0e-130
Identity = 259/354 (73.16%), Postives = 287/354 (81.07%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA NPHH+  SPPSSR                  EELVNEC+QKGT
Sbjct: 1   METPQEVLVDIGHLMAFNPHHHFTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIAN+LF LP TE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           R+  KR+R+EK+E NRLQNLKQAAK+GALPSHV LAATALPITGTQA TKKI KDELGNV
Sbjct: 181 RKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQATTKKITKDELGNV 240

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AGMAATATA GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKA 355
           NSHEILNINKAVN+ NVK EK+R H+ RKPSSSTSSKLK NK LQKK LKKG +
Sbjct: 301 NSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKANKKLQKKPLKKGSS 323

[Close]

BLAST of CcUC06G120740 vs. NCBI nr
Match: XP_022987784.1 (ribosome biogenesis regulatory protein homolog [Cucurbita maxima])

HSP 1 Score: 475.3 bits (1222), Expect = 4.5e-130
Identity = 257/354 (72.60%), Postives = 287/354 (81.07%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA +PHH+  SPP +R                  EELVNEC+QKGT
Sbjct: 1   METPQEVQVDIGHLMAFDPHHHFTSPPPTR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIAN+LF LP TE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           R+  KR+R+EK+E NRLQNLKQAAK+GALPSHV LAATALPITGTQA TKKI KDELGNV
Sbjct: 181 RQENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQATTKKITKDELGNV 240

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AGMAATATA GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKA 355
           NSHEILNINKAVN+ NVK EK+R H+ RKPSSSTSSKLKPNK LQKK LKKG +
Sbjct: 301 NSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKPNKKLQKKPLKKGSS 323

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BLAST of CcUC06G120740 vs. ExPASy Swiss-Prot
Match: Q9SH88 (Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 GN=At2g37990 PE=2 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 6.4e-95
Identity = 196/353 (55.52%), Postives = 246/353 (69.69%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           MET+Q   VD+ +L+A NP+H   S PSSR                   ELV E + +GT
Sbjct: 5   METEQIYQVDVGNLLAFNPNHRFPSAPSSR------------------GELVKEILTEGT 64

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           +LVQ IANKLF  P TE  DG +V+LPPP T+LPREKH+P+PKPPTKWE FA KKG    
Sbjct: 65  KLVQEIANKLFNFPSTETNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKG---- 124

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    I+  KK K V+D+ T+ +KR +GYDR ND+ ++PI+++K +DEPGVDPFA+
Sbjct: 125 ---------IQKRKKEKVVWDEQTNQFKRRHGYDRVNDDNDVPIIEAKESDEPGVDPFAK 184

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           R   K++R+ K+EKNRLQNLK A K GALPSHV LAAT+LPI+GT+A  KKI KDELG+V
Sbjct: 185 RLDDKKKRVGKQEKNRLQNLKAAEKAGALPSHVQLAATSLPISGTKAQPKKIGKDELGDV 244

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AG+AAT+TA GGKFDKKLPGEKPPK +GK+ K+LPVV G G  + EKEQT  VL+++ SK
Sbjct: 245 AGLAATSTASGGKFDKKLPGEKPPKKQGKHHKYLPVVSGRGDVNAEKEQTNNVLSKIFSK 304

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGK 354
           +SHEILN+ KA+N+ NVK EKK+        S  S KLKP K + KK   K K
Sbjct: 305 HSHEILNVGKAINMYNVKKEKKK--------SGRSDKLKPKKDITKKPANKAK 318

[Close]

BLAST of CcUC06G120740 vs. ExPASy Swiss-Prot
Match: Q15050 (Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 PE=1 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 4.0e-28
Identity = 97/274 (35.40%), Postives = 148/274 (54.01%), Query Frame = 0


Query: 64  QAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFLFWF 123
           Q + N+L+ LP    ++ ++  LP P TRLPREK LP+P+P T+W+ FA+ KG       
Sbjct: 70  QLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKG------- 129

Query: 124 HLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAERRA 183
                 I+  KKT  V+D+ +  W+R +GY RA D+    +++     +P  D FA+R  
Sbjct: 130 ------IRPKKKTNLVWDEVSGQWRRRWGYQRARDDTKEWLIEVPGNADPLEDQFAKRIQ 189

Query: 184 KKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNVAGM 243
            K++R+ K E NRL+NL +A KM  LPS     A  L  TG Q+      K+ELG    +
Sbjct: 190 AKKERVAKNELNRLRNLARAHKM-QLPS-----AAGLHPTGHQS------KEELGRAMQV 249

Query: 244 AATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISKNSH 303
           A  +TA  G+F ++LP EK P+  GK RKF P+    G  + EK+   ++L  + SK   
Sbjct: 250 AKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ 309

Query: 304 EILNINKAVNLCNVKGEKKRTHERRKPSSSTSSK 338
             L++ +A N    + +++   +RRK S     K
Sbjct: 310 --LDVTRATNKQMREEDQEEAAKRRKMSQKGKRK 313

[Close]

BLAST of CcUC06G120740 vs. ExPASy Swiss-Prot
Match: Q9CYH6 (Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 5.2e-28
Identity = 95/274 (34.67%), Postives = 149/274 (54.38%), Query Frame = 0


Query: 64  QAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFLFWF 123
           Q + N+L+ LP    ++ ++  LP P TRLPREK LP+P+P T+W+ FA+ KG       
Sbjct: 70  QLLINQLWRLPTERVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKG------- 129

Query: 124 HLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAERRA 183
                 I+  KKT  V+D+ +  W+R +GY RA D+    +++   + +P  D FA+R  
Sbjct: 130 ------IRPKKKTNLVWDEASGQWRRRWGYKRARDDTKEWLIEVPGSADPMEDQFAKRTQ 189

Query: 184 KKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNVAGM 243
            K++R+ K E NRL+NL +A KM  +PS     +  L  TG Q+      K+ELG    +
Sbjct: 190 AKKERVAKNELNRLRNLARAHKM-QMPS-----SAGLHPTGHQS------KEELGRAMQV 249

Query: 244 AATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISKNSH 303
           A  +TA  G+F ++LP EK P+  GK RKF P+    G  + EK+   ++L  + SK   
Sbjct: 250 AKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLF---GDFAAEKKNQLELLRVMNSKKPR 309

Query: 304 EILNINKAVNLCNVKGEKKRTHERRKPSSSTSSK 338
             L++ +A N    + +++   +RRK S     K
Sbjct: 310 --LDVTRATNKQMREEDQEEAAKRRKMSQKGKRK 313

[Close]

BLAST of CcUC06G120740 vs. ExPASy Swiss-Prot
Match: A1A5P2 (Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=Rrs1 PE=2 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.8e-28
Identity = 95/274 (34.67%), Postives = 149/274 (54.38%), Query Frame = 0


Query: 64  QAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFLFWF 123
           Q + N+L+ LP    ++ ++  LP P TRLPREK LP+P+P T+W+ FA+ KG       
Sbjct: 70  QLLVNQLWQLPTERVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKG------- 129

Query: 124 HLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAERRA 183
                 I+  KKT  V+D+ +  W+R +GY RA D+    +++   + +P  D FA+R  
Sbjct: 130 ------IRPKKKTNLVWDEVSGQWRRRWGYKRARDDTKEWLIEVPGSADPMEDQFAKRIR 189

Query: 184 KKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNVAGM 243
            K++R+ K E NRL+NL +A KM  +PS     +  L  TG Q+      K+ELG    +
Sbjct: 190 AKKERVAKNELNRLRNLARAHKM-QMPS-----SAGLHPTGHQS------KEELGRAMQV 249

Query: 244 AATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISKNSH 303
           A  +TA  G+F ++LP EK P+  GK RKF P+    G  + EK+   ++L  + SK   
Sbjct: 250 AKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ 309

Query: 304 EILNINKAVNLCNVKGEKKRTHERRKPSSSTSSK 338
             L++ +A N    + +++   +RRK S     K
Sbjct: 310 --LDVTRATNKQMREEDQEEAAKRRKMSQKGKKK 313

[Close]

BLAST of CcUC06G120740 vs. ExPASy Swiss-Prot
Match: Q2KIH4 (Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.2e-27
Identity = 95/274 (34.67%), Postives = 148/274 (54.01%), Query Frame = 0


Query: 64  QAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFLFWF 123
           Q + N+L+ LP    ++ L+  LP P TRLPREK +P+P+P T+W+ FA+ KG       
Sbjct: 70  QLLINQLWQLPTERVEEALVARLPEPSTRLPREKPVPRPRPLTRWQQFARLKG------- 129

Query: 124 HLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAERRA 183
                 I+  KKT  V+D+ +  W+R +GY RA D+    +++     +P  D FA+R  
Sbjct: 130 ------IRPKKKTNLVWDEVSGRWRRRWGYQRARDDTKEWLIEVPGNADPMEDQFAKRIQ 189

Query: 184 KKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNVAGM 243
            K++R+ K E NRL+NL +A KM  LPS     A  +  TG Q+      K+ELG    +
Sbjct: 190 AKKERVAKNELNRLRNLARAHKM-QLPS-----AAGMHPTGHQS------KEELGRAMQV 249

Query: 244 AATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISKNSH 303
           A  +TA  G+F ++LP EK P+  GK RKF P+    G  + E++   ++L  + SK   
Sbjct: 250 AKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLF---GDFAAERKSQLEMLRVMNSKKPQ 309

Query: 304 EILNINKAVNLCNVKGEKKRTHERRKPSSSTSSK 338
             ++I +A N    + +++   +RRK S     K
Sbjct: 310 --MDITRATNKQMREEDQEEAAKRRKMSQKGKRK 313

[Close]

BLAST of CcUC06G120740 vs. ExPASy TrEMBL
Match: A0A6J1HAS5 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111461680 PE=3 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 2.3e-132
Identity = 261/354 (73.73%), Postives = 289/354 (81.64%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA NPHH+  SPPSSR                  EELVNEC+QKGT
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIAN+LF LP TE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           R+  KR+R+EK+E NRLQNLKQAAK+GALPSHV LAATALPITGTQAATKKI KDELGNV
Sbjct: 181 RQENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQAATKKITKDELGNV 240

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AGMAATATA GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKA 355
           NSHEILNINKAVN+ NVK EK+R H+ RKPSSSTSSKLKPNK LQKK LKKG +
Sbjct: 301 NSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKPNKKLQKKPLKKGSS 323

[Close]

BLAST of CcUC06G120740 vs. ExPASy TrEMBL
Match: A0A6J1CSP0 (Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC111014399 PE=3 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 5.8e-131
Identity = 256/355 (72.11%), Postives = 289/355 (81.41%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           ME QQQ+ VD+ HLMA NPHH+L SPPSSR                  EELVNEC+QKGT
Sbjct: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIAN+LF LP TE +DG LV LPPPKTRLPREKHLPKPKPPTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRG---- 120

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K  +D+ T TWKR +GYDRANDE+NIPI+++KMTDEPG+DPFAE
Sbjct: 121 ---------IKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAE 180

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           R++ KR+R+EK+E NRLQNLKQAAK+GALPSHV LAATALPITGTQ A KK+ KDELGNV
Sbjct: 181 RQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKKMTKDELGNV 240

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AGMAATATA GGKFD+KL GEKPPKH+GKYRKFLPVVEGTGVGS+E+EQTE VLNRLISK
Sbjct: 241 AGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISK 300

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKAN 356
           NSHEILN+NKA+N+ NVK EK+R H+  KPSSSTSSKLKPNK  QKKS+KKG +N
Sbjct: 301 NSHEILNVNKAINMYNVKREKRRKHD-GKPSSSTSSKLKPNKKPQKKSMKKGVSN 323

[Close]

BLAST of CcUC06G120740 vs. ExPASy TrEMBL
Match: A0A6J1JJT9 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111485227 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 2.2e-130
Identity = 257/354 (72.60%), Postives = 287/354 (81.07%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA +PHH+  SPP +R                  EELVNEC+QKGT
Sbjct: 1   METPQEVQVDIGHLMAFDPHHHFTSPPPTR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIAN+LF LP TE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           R+  KR+R+EK+E NRLQNLKQAAK+GALPSHV LAATALPITGTQA TKKI KDELGNV
Sbjct: 181 RQENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQATTKKITKDELGNV 240

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AGMAATATA GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKA 355
           NSHEILNINKAVN+ NVK EK+R H+ RKPSSSTSSKLKPNK LQKK LKKG +
Sbjct: 301 NSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKPNKKLQKKPLKKGSS 323

[Close]

BLAST of CcUC06G120740 vs. ExPASy TrEMBL
Match: A0A6J1HW20 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111467179 PE=3 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 1.6e-120
Identity = 243/354 (68.64%), Postives = 275/354 (77.68%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           ME QQ   +D+ +LMA NPHH   S  SSR                  E+LV+EC+QKG 
Sbjct: 3   MENQQPFQIDLGNLMAFNPHHKFPSLSSSR------------------EDLVSECLQKGA 62

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           EL Q IAN LF LP TE +DG LV LPPP TRLPREK LPKPKPPTKWELFAKK+G    
Sbjct: 63  ELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG---- 122

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K V+D  T +WKR +GYDRANDE+NIPI+++KMTDEPGVDPFA 
Sbjct: 123 ---------IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAA 182

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           RRA K+ R+EK+E+N+LQNLKQAAK+GALPSHV LAATALPITGTQAA KKI KDELGNV
Sbjct: 183 RRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDELGNV 242

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AGMAAT+TA GGKFDKKL GEKP KH+GKYRKFLPVVEGTG+GSQE+EQTEKVLNRLISK
Sbjct: 243 AGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISK 302

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKA 355
           NSHEILNINKAVN+ NVK EKK+ ++R K SS +S+KLKPNK LQKK LKKG +
Sbjct: 303 NSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSNKLKPNKKLQKKPLKKGSS 325

[Close]

BLAST of CcUC06G120740 vs. ExPASy TrEMBL
Match: A0A6J1F066 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111440969 PE=3 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 2.1e-120
Identity = 243/354 (68.64%), Postives = 275/354 (77.68%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           ME QQ   +D+ +LMA NPHH   S  SSR                  E+LV+EC+QKG 
Sbjct: 3   MENQQPFQIDLGNLMAFNPHHQYPSLSSSR------------------EDLVSECLQKGA 62

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           EL Q IAN LF LP TE +DG LV LPPP TRLPREK LPKPKPPTKWELFAKK+G    
Sbjct: 63  ELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG---- 122

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K V+D  T +WKR +GYDRANDE+NIPI+++KMTDEPGVDPFA 
Sbjct: 123 ---------IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAA 182

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           RRA K+ R+EK+E+N+LQNLKQAAK+GALPSHV LAATALPITGTQAA KKI KDELGNV
Sbjct: 183 RRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDELGNV 242

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AGMAAT+TA GGKFDKKL GEKP KH+GKYRKFLPVVEGTG+GSQE+EQTEKVLNRLISK
Sbjct: 243 AGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISK 302

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGKA 355
           NSHEILNINKAVN+ NVK EKK+ ++R K SS +S+KLKPNK LQKK LKKG +
Sbjct: 303 NSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSNKLKPNKKLQKKPLKKGSS 325

[Close]

BLAST of CcUC06G120740 vs. TAIR 10
Match: AT2G37990.1 (ribosome biogenesis regulatory protein (RRS1) family protein )

HSP 1 Score: 349.0 bits (894), Expect = 4.6e-96
Identity = 196/353 (55.52%), Postives = 246/353 (69.69%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSSPSDNLFCRARLHQLEELVNECIQKGT 60
           MET+Q   VD+ +L+A NP+H   S PSSR                   ELV E + +GT
Sbjct: 5   METEQIYQVDVGNLLAFNPNHRFPSAPSSR------------------GELVKEILTEGT 64

Query: 61  ELVQAIANKLFFLPPTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           +LVQ IANKLF  P TE  DG +V+LPPP T+LPREKH+P+PKPPTKWE FA KKG    
Sbjct: 65  KLVQEIANKLFNFPSTETNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKG---- 124

Query: 121 FWFHLFWCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    I+  KK K V+D+ T+ +KR +GYDR ND+ ++PI+++K +DEPGVDPFA+
Sbjct: 125 ---------IQKRKKEKVVWDEQTNQFKRRHGYDRVNDDNDVPIIEAKESDEPGVDPFAK 184

Query: 181 RRAKKRQRIEKREKNRLQNLKQAAKMGALPSHVLLAATALPITGTQAATKKIRKDELGNV 240
           R   K++R+ K+EKNRLQNLK A K GALPSHV LAAT+LPI+GT+A  KKI KDELG+V
Sbjct: 185 RLDDKKKRVGKQEKNRLQNLKAAEKAGALPSHVQLAATSLPISGTKAQPKKIGKDELGDV 244

Query: 241 AGMAATATAGGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSQEKEQTEKVLNRLISK 300
           AG+AAT+TA GGKFDKKLPGEKPPK +GK+ K+LPVV G G  + EKEQT  VL+++ SK
Sbjct: 245 AGLAATSTASGGKFDKKLPGEKPPKKQGKHHKYLPVVSGRGDVNAEKEQTNNVLSKIFSK 304

Query: 301 NSHEILNINKAVNLCNVKGEKKRTHERRKPSSSTSSKLKPNKILQKKSLKKGK 354
           +SHEILN+ KA+N+ NVK EKK+        S  S KLKP K + KK   K K
Sbjct: 305 HSHEILNVGKAINMYNVKKEKKK--------SGRSDKLKPKKDITKKPANKAK 318

The following BLAST results are available for this feature:

BLAST of CcUC06G120740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961058.1	4.8e-132	73.73	ribosome biogenesis regulatory protein homolog [Cucurbita moschata]	[more]
XP_023515967.1	1.8e-131	73.16	ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp....	[more]
XP_022144805.1	1.2e-130	72.11	ribosome biogenesis regulatory protein homolog [Momordica charantia]	[more]
KAG6589856.1	2.0e-130	73.16	Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosp...	[more]
XP_022987784.1	4.5e-130	72.60	ribosome biogenesis regulatory protein homolog [Cucurbita maxima]	[more]

BLAST of CcUC06G120740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SH88	6.4e-95	55.52	Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 G...	[more]
Q15050	4.0e-28	35.40	Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 P...	[more]
Q9CYH6	5.2e-28	34.67	Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 ...	[more]
A1A5P2	6.8e-28	34.67	Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=...	[more]
Q2KIH4	1.2e-27	34.67	Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=...	[more]

BLAST of CcUC06G120740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAS5	2.3e-132	73.73	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1CSP0	5.8e-131	72.11	Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1JJT9	2.2e-130	72.60	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114852...	[more]
A0A6J1HW20	1.6e-120	68.64	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114671...	[more]
A0A6J1F066	2.1e-120	68.64	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of CcUC06G120740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37990.1	4.6e-96	55.52	ribosome biogenesis regulatory protein (RRS1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007023	Ribosomal biogenesis regulatory protein	PFAM	PF04939	RRS1	coord: 49..200 e-value: 3.0E-37 score: 128.0
IPR007023	Ribosomal biogenesis regulatory protein	PANTHER	PTHR17602	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 7..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..355
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..270
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..333
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 255..270
None	No IPR available	PANTHER	PTHR17602:SF6	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 7..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G120740.1	CcUC06G120740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005634	nucleus