CcUC06G120550 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G120550
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	GTP-binding nuclear protein
Location	CicolChr06: 22334816 .. 22340693 (+)
RNA-Seq Expression	CcUC06G120550
Synteny	CcUC06G120550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCATAGAGCTTCTCATAGAAATACAAAAACGTATCGCCCACTTCCTACAATCCGGCCTGAACCTTTGGGTAGGCTTTGCAGGAACAACAACAATAGCTGCACGGAGTACAGTAGAATTCCCTGGTACGGTCATTCGGGAAGTCCCTCCGAGGACGACTCCCATACAATTCTTGCGAGAGCTGGAGAAGCTTCTACGGGTAAAGCACCGTATCCATATAACAGCTTGCCACCTACGCTCCGCCATCCATTCAAACTTTAGGAACCTAGGTAATAGTATCCCGATCAAAGAGCTGATGAAGGGGATGAGCCAAACAGGGAGTCTACTGGACGGGGTTCAACTAGCGGAGACTCTTGGAACTGCTGGAGTAAGAAGTCCCCAAGTGAGCGTATTATGGGGGACCGTCAAGCACATCCGAAAATGAATAAAAATATGTATAAATTTCGTGAGCTGCGATTGAACTGAACGTTCCAAGTGCATCCAGCAGGAATCGAACCTACGAATTTTCCCCTTTATTAGGTCGGTATAGGTTGGGCGCTTTAACCATTCAGCCATGCAGGTTATTCTATTCCACCTCTTAGAAAGAAAAGAACTGAAATCAAAATACTTAATAGCATGGCGATACATTTATAAAAAACTTCTACCCCGAGCACACGCAATGGAGCCGTAGACAGTCAAGTAAAATCCAATCCACGAAATAATTTGATCAATACAGAGGGCGAGGCCAACTTCGATGTGTTACTTTGGGAGTACTAGGATAGACAAAGCTTTAATGACGTTGAAGCTACAATTTCTTCTTTGTTGGACTCTATTTAGGGATTCTTCTTTAGTTCAAGACTCAAGTGTTAGGATTGGTACCCTAAATCTCATCAGTCTCGTAGTTGTAATTAATGTAAAGATAAATTATTTATTTAATAAAATAAGAGGTATTTTATTTGACATTTAGCTCGCATTTTATTTGATCCAATAAACTAAGATCTAAGGTTATTATATGTAGCTTGAACAGTATGTAGTAGACATACAAGTGAATCTTGTTCAAGTAATAACCAAAAAGGTTTGCAGTATATGAATAAGGTTGGGTACCTTATCCTGGTGAAACTGTGGATATGACCCACTTTGTAATTGTTACAGACGATTTGATCCAAATCATTCATGTGGAGACATGTGAGTGGGGGTATCCTGTATGAAGAGTTTATATAAGACCGAACCACAAAATGATTAATCTCTTATTATAACACCATTGATTGAAGAGATTAACTTTTAGTTAGGATAACCAAAGCAACTCGATCTCAATCCTGAATGAGTTATAGACTCTTATCTATGAGGACAATCCTTTGATTTGTATAGGTAAGAGTGGCTTGGGTCACCAAATCAATAAGGTTACCTGGGGATCTGTTCGAGTAGGGAGCTAGAAACGTAACTACACAAGATGAATTTCACTCCTTCCCATCCTTGGGAAAGTAGATAGATCGCTCTCTTAAGTGCTGAATCCAAGTCTTGAACAATGGGTCACTCCCTCTCATTAGCCCGAGAGGGATTTATTTATGGTGGGACCATAAACAGATTGTTCATTAGAGGATCAGTGGACTTAAGGAGAAATAAGTAATTACAAGGGTAAAACAGTAATCTTGACTCAGTTGTAATTACGGGCAATTATGAAGGGTCGACTTATTGATGACTAGTTATATCCATAGACACATAAATATATCTACAGTGCGAATAGTGAATGTTAATTAAGTTAATTAAAAAGTTTAATTAATTTAATTTTGAATTATTGGAGTTTCTAATTTGTAGGTTCATTAGGTCTCCATGCTAGCTCACTACGGGTAAAGCAAAGATCAATAAATTATAGAATAATTTGAATTGTTCAAATTGTTTAAGGGAATTTAATATTAATAAAAATTAATATAAAGTATAATATATTATGATACATTATAGTTAATTATAAATGTGATTTATAATTGAAACTATATAATATGAAAGATTGTCATTTGAATGAGATTTAGATATTAATTTAATATGAATTAGATTCATATTAGAACTATAGAGTAAAATTAATATGCATGAGATTCATATTGAAACTAGCTTAGGAGAAAGATATGCATTTTTATATGATTTAAATGCATTATAAATAAATATGTGATGTTTATTTGTTAATTAATTAATTAATAGTTGAATTAATTAATTGCTTATTATTTATTCAATTATATTAAATTTGAGTTAATATATTTAATAAATGATAATTAGGGATTAAGGTTAGGGCTTGATCTCTTTATAATGATACAGAGATACAGGAAACTCGCGGTAGAAAAACAAAAAGTCATAAGCTCCCTTCTCTCTAAACTTCTCTAGAAAGCCTTCTCTGTTCGTAAACTCCAAGTAATTTAGAAGAATTCTCTTCATCCGAAAGGTATTTTCTAAATTCTTTGTTACATATCTTTAACCTTATTTTTTCAGAAAACTAATTATGTTTTTCTTTCTCAAATCAAAGACAAAAGCGATCATATGCTTCCGCAATGGGATTCAATCCCAAGCCTAACCATCCTTTCTTATCTCCTCTCCCACTCTTTTGTCAGGCTCTAATCTGGTGCCTCCTCATGAGTCTGTGGTTTCTTTCATGTGATGGAGCCTCGTGGGATCACGGGGAAATATTCTTTGGGCTAGATGTAAATCTATTTCTAGACATTTTAACTCTTTATTGTCGGAGAGGTGGGCAATACAAGAGAGGATTCAATTAATCTCCCCTATTCTCACTTCTCCCATGGTCATTGAACTAGATAGTCTCATTTGTATCAAATCGATACAAAAGATCGATGAGCATTTTACTCCAGTTAAGACTATTACCGAAGAAGTTCTCAAGTTAGCTTCATTGTGGTGGAGGTTCAAGTTTTCAGACATATTAAACACTCTTAGAATAGGATGACAGATGGCTTGACTTGGTGGTATCAGTTATTATTAAACTAAGCTCGTTTTGCCAGATTTAAGGCTTTCTATGACATTTTGTGTTAAACCGTAGATTTATTATACATGTATGTTTATTGACCTCGGGAATGGATCAAAATCCCACATTGGTTTATAGTTCGAATCTTCAGAAAAATACTAATTTTGTTTTAAAATACAATGAAAATAACTCTTTCCAAAAATTAATACTAAAATCGATTTTATTTCATTTTTCCCGTGGGGTGAGAAAATAGTAAAACTCCGCCTCAAAATTCAAAAACACTCACGACATTCAATTCGGTGGAGAAAAGCAACGGTGGAGCATCATCCGACTACAAATCCAACGGTCATAAAGATAGCGTCATCTGAAAGCCAGTAGCGCTTACCCTATAAACCCTCGTTCTCAACTCTCAACCCATTCTAACCTAAATCGCCGATTTCTTCTTCTCGCTTCGCATTTTCAATTCGACGCATTCCAATGGTGGGTACTATCTTTTACTCTTCTCTTCTTCATCCGCTTACTCTTTTGAGTATTTGTTGATTCCATTTTGTGGTGAATTTCTTAGGCTTTGCCGGACCAGAAGACCGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGTGATGGCGGCACTGGTATGTTCTTTTTTTCTCAGTTTTATTTGAGAACAAATTATCACTTACGATCGCTGTATCATATCTTATGGTTATAGCAATATATCATTTCGGACGTAAAATGGTCTTTGCTAGCTGGTAGTACTAGTTTGAGCTTGGAGTGTGAAGAAGAGAGCTTAAACCTTGAAACTATGTTAATGCCGTATGATTTGTACAAAGATTGATCGGGGATTTGATTCTTGTTCTGAGAAGAAAACTTGGCTATGGTTTGTTTGGCCTTTAATTTTTGGTTAGCACTCGATAGTCGAAATGTTTTCAACAATAATTCTTTCGGGAGCATGTATAATCCACAGTGATTTCATTATCTTCTTGGCTGCGATATTGTCTGTTGGATCGTCAATTGTCTATAAATACTAGAAAACTCATGACATTGCCTTGTAAAAGAGGATTTCGAGCGGTTACCATAAAGGAAGAAAGAAAGCAAAGAGATTCACGAATTTTTAGAACATTGGATTTCAATTGTTTGTATTGCTTCAGTTTGAAGGCGCGAGATGGATTCATCTAATTCTCTTAGCAAGACTTGAAAGTACCGAGTATCACTGAATTATATGTGTTATGTGTTTCTCAGGAAAAACAACTTTTGTGAAAAGACATCTCACAGGGGAATTTGAAAAGAAATACGAACGTAAGCATTTTTACCACCCCCCCCCCCCCCCTTTTAGTTTATTTAGGGTTTTCTTTCAAATAAACAAACAACTTATAAGTATGAATTTTTTCCTTCTATTGTTTCTTATGAACTTAGCAACCATTGGCGTGGAAGTGCACCCTTTGGACTTCTTCACAAACTGTGGAAAAATTAGATTTTACTGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGATACTAGTAAGTTACAGACTTAGGTCTTCTATTCTTTTCGATGTACATTTTGGCTTCCATGTTTTGATATTCCCGGTTATACTTTATTGCACTTGCACATTTCCTCATTTTTTAGGGACTGTTAAGAAGATCATTTTCCTCTTATGTATGCCTTTGCTGTTTTTCCTGAATATGAACTGAAATTTACAATACTATTTAACTTATTCCTCTAGCAGCATTGTTAAATTTTCTATATTCCCTTGTGCATTTATTTGATCTGATAGATTATTTGATCTTGGTATTATTTTCATGATGAACTTTCATTTCTGTTCATTTCTGTTCTGATTTCAATTTTCTCCTACCGATGAAATTCCTTATTTTGTGTCTTAATCCATGAATGCAGCATCCATGGGCAATGTGCAATCATCATGTTTGATGTAACTGCCAGATTGACGTACAAAAATGTTCCTACATGGCATCGTGATCTTTGCAGGTAATCTAACATTTGTTGTTAGGAAACAAAACAGTGTATATGAATGAATTGTTGCAATGTCAAGGCATTCATCTGGAAGCTGCTTACCATCTGATGACTTATTAACGTGCAGGGTGTGTGAGAATATTCCAATTGTTCTCTGTGGAAACAAGGTCGATGTAAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCAGCGAAGAGTAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGGAAGTTAGCTGGGTAAATCCAGTTGCCTGTTTGCTTTATATTATTGTCTTTAGAATGTGTGATCATTCAGGACAATCGTTTATTTTTCATATGGTGGCTACATCTCAGGGATCCTAACATTCATTTTGTGGAGTCTCCTGCCCTTGCTCCTCCAGAAGTACACATTGACTTGGCTGCCCAGCAACAGTAAGACTTTCTTTATCCCAACTCATAACCAATGAACCATTGACATTCTTTTAAGTAATTCAAATACTCATCTCCGCATGTATTCTTCTGCAGGCATGAAGCTGAGTTGGCGGCAGCTGCCAGTCAACCTCTGCCAGATGATGATGACGATGCATTTGATTAGAGACGTGTGGATTGAACTGTTGATTTTCTTTATCAGATATCTTTATCTTCTCCTTTTCCTCCGAGTGATCTCGTTGTTAGGATTATTGACAGGAGGGAATAGCTGGGCTGGATTGGGTGTGGGTAGTGGTAGAGATTTGAGTTTTGAAAACGTCAAGTTTTCCCGGAACAAACAGAATTTGGTGTCAATGATTGGTTTTTCTTTTCTGTGAGTGAGTTGTGCATTGATGAATATAACTGTGTGGATTAGATGTTACAGTATTTGAGATGAGTTGATTCCTTTCTTCAACCTTTCTTGTGATTTTT

mRNA sequence

ATGGCCCATAGAGCTTCTCATAGAAATACAAAAACGTATCGCCCACTTCCTACAATCCGGCCTGAACCTTTGGGTAGGCTTTGCAGGAACAACAACAATAGCTGCACGGAGTACAGTAGAATTCCCTGGTACGGTCATTCGGGAAGTCCCTCCGAGGACGACTCCCATACAATTCTTGCGAGAGCTGGAGAAGCTTCTACGGGGAGTCTACTGGACGGGGTTCAACTAGCGGAGACTCTTGGAACTGCTGGAGTAAGAAGTCCCCAAGCTTTGCCGGACCAGAAGACCGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGTGATGGCGGCACTGGAAAAACAACTTTTGTGAAAAGACATCTCACAGGGGAATTTGAAAAGAAATACGAACCAACCATTGGCGTGGAAGTGCACCCTTTGGACTTCTTCACAAACTGTGGAAAAATTAGATTTTACTGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGATACTACATCCATGGGCAATGTGCAATCATCATGTTTGATGTAACTGCCAGATTGACGTACAAAAATGTTCCTACATGGCATCGTGATCTTTGCAGGGTGTGTGAGAATATTCCAATTGTTCTCTGTGGAAACAAGGTCGATGTAAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCAGCGAAGAGTAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGGAAGTTAGCTGGGGATCCTAACATTCATTTTGTGGAGTCTCCTGCCCTTGCTCCTCCAGAAGTACACATTGACTTGGCTGCCCAGCAACAGCATGAAGCTGAGTTGGCGGCAGCTGCCAGTCAACCTCTGCCAGATGATGATGACGATGCATTTGATTAGAGACGTGTGGATTGAACTGTTGATTTTCTTTATCAGATATCTTTATCTTCTCCTTTTCCTCCGAGTGATCTCGTTGTTAGGATTATTGACAGGAGGGAATAGCTGGGCTGGATTGGGTGTGGGTAGTGGTAGAGATTTGAGTTTTGAAAACGTCAAGTTTTCCCGGAACAAACAGAATTTGGTGTCAATGATTGGTTTTTCTTTTCTGTGAGTGAGTTGTGCATTGATGAATATAACTGTGTGGATTAGATGTTACAGTATTTGAGATGAGTTGATTCCTTTCTTCAACCTTTCTTGTGATTTTT

Coding sequence (CDS)

ATGGCCCATAGAGCTTCTCATAGAAATACAAAAACGTATCGCCCACTTCCTACAATCCGGCCTGAACCTTTGGGTAGGCTTTGCAGGAACAACAACAATAGCTGCACGGAGTACAGTAGAATTCCCTGGTACGGTCATTCGGGAAGTCCCTCCGAGGACGACTCCCATACAATTCTTGCGAGAGCTGGAGAAGCTTCTACGGGGAGTCTACTGGACGGGGTTCAACTAGCGGAGACTCTTGGAACTGCTGGAGTAAGAAGTCCCCAAGCTTTGCCGGACCAGAAGACCGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGTGATGGCGGCACTGGAAAAACAACTTTTGTGAAAAGACATCTCACAGGGGAATTTGAAAAGAAATACGAACCAACCATTGGCGTGGAAGTGCACCCTTTGGACTTCTTCACAAACTGTGGAAAAATTAGATTTTACTGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGATACTACATCCATGGGCAATGTGCAATCATCATGTTTGATGTAACTGCCAGATTGACGTACAAAAATGTTCCTACATGGCATCGTGATCTTTGCAGGGTGTGTGAGAATATTCCAATTGTTCTCTGTGGAAACAAGGTCGATGTAAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCAGCGAAGAGTAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGGAAGTTAGCTGGGGATCCTAACATTCATTTTGTGGAGTCTCCTGCCCTTGCTCCTCCAGAAGTACACATTGACTTGGCTGCCCAGCAACAGCATGAAGCTGAGTTGGCGGCAGCTGCCAGTCAACCTCTGCCAGATGATGATGACGATGCATTTGATTAG

Protein sequence

MAHRASHRNTKTYRPLPTIRPEPLGRLCRNNNNSCTEYSRIPWYGHSGSPSEDDSHTILARAGEASTGSLLDGVQLAETLGTAGVRSPQALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD

Homology

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BLAST of CcUC06G120550 vs. NCBI nr
Match: XP_038879205.1 (GTP-binding nuclear protein Ran1B [Benincasa hispida])

HSP 1 Score: 461.8 bits (1187), Expect = 4.5e-126
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           SPALAPPEVHIDLAAQQQHEAEL AAASQPLPDDDDDAFD
Sbjct: 182 SPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 221

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BLAST of CcUC06G120550 vs. NCBI nr
Match: BAP11912.1 (Ran-GTPase [Citrullus lanatus] >BAR79436.1 Ran-GTPase [Citrullus lanatus])

HSP 1 Score: 461.8 bits (1187), Expect = 4.5e-126
Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAF+
Sbjct: 182 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of CcUC06G120550 vs. NCBI nr
Match: XP_008465001.1 (PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis melo] >KAA0046737.1 GTP-binding nuclear protein Ran-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 461.5 bits (1186), Expect = 5.9e-126
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 88  PQALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 147
           P ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC
Sbjct: 33  PMALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 92

Query: 148 GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIP 207
           GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIP
Sbjct: 93  GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIP 152

Query: 208 IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHF 267
           IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHF
Sbjct: 153 IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHF 212

Query: 268 VESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           VESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAF+
Sbjct: 213 VESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

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BLAST of CcUC06G120550 vs. NCBI nr
Match: XP_011656253.2 (GTP-binding nuclear protein Ran1B [Cucumis sativus] >KGN65576.2 hypothetical protein Csa_019833 [Cucumis sativus])

HSP 1 Score: 460.3 bits (1183), Expect = 1.3e-125
Identity = 218/220 (99.09%), Postives = 218/220 (99.09%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           SPALAPPEVHIDLA QQQHEAEL AAASQPLPDDDDDAFD
Sbjct: 182 SPALAPPEVHIDLAVQQQHEAELVAAASQPLPDDDDDAFD 221

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BLAST of CcUC06G120550 vs. NCBI nr
Match: KAG7023545.1 (GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 459.5 bits (1181), Expect = 2.2e-125
Identity = 221/236 (93.64%), Postives = 226/236 (95.76%), Query Frame = 0


Query: 74  VQLAETLGTAGVRSPQALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPT 133
           V L+ TL  + +    ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRH+TGEFEKKYEPT
Sbjct: 308 VSLSLTLMISFLFISSALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHITGEFEKKYEPT 367

Query: 134 IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP 193
           IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP
Sbjct: 368 IGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP 427

Query: 194 TWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFL 253
           TWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFL
Sbjct: 428 TWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFL 487

Query: 254 YLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           YLARKLAGD NIHFVESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAF+
Sbjct: 488 YLARKLAGDANIHFVESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 543

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BLAST of CcUC06G120550 vs. ExPASy Swiss-Prot
Match: P41918 (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 1.8e-125
Identity = 213/220 (96.82%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALP Q+ VDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPGQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           SPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDD+ FD
Sbjct: 182 SPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221

[Close]

BLAST of CcUC06G120550 vs. ExPASy Swiss-Prot
Match: Q8H156 (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 449.9 bits (1156), Expect = 2.3e-125
Identity = 213/220 (96.82%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           SPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDDD F+
Sbjct: 182 SPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of CcUC06G120550 vs. ExPASy Swiss-Prot
Match: P41917 (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 SV=3)

HSP 1 Score: 448.0 bits (1151), Expect = 8.8e-125
Identity = 210/220 (95.45%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           SPALAPPEVH+D+AAQQQ+EA+LAAAA+QPLPDDDDDAF+
Sbjct: 182 SPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of CcUC06G120550 vs. ExPASy Swiss-Prot
Match: A2WSI7 (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1 PE=2 SV=2)

HSP 1 Score: 441.0 bits (1133), Expect = 1.1e-122
Identity = 207/220 (94.09%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAGD N+HFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           +PALAPP+V IDLAAQQQHEAELAAAA+QPLPDDDDD  +
Sbjct: 182 TPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of CcUC06G120550 vs. ExPASy Swiss-Prot
Match: Q7F7I7 (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAN1 PE=2 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 1.1e-122
Identity = 207/220 (94.09%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAGD N+HFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           +PALAPP+V IDLAAQQQHEAELAAAA+QPLPDDDDD  +
Sbjct: 182 TPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of CcUC06G120550 vs. ExPASy TrEMBL
Match: A0A068PXN5 (GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan1 PE=2 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 2.2e-126
Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAF+
Sbjct: 182 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of CcUC06G120550 vs. ExPASy TrEMBL
Match: A0A5A7TXX0 (GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00180 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.8e-126
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 88  PQALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 147
           P ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC
Sbjct: 33  PMALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 92

Query: 148 GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIP 207
           GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIP
Sbjct: 93  GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIP 152

Query: 208 IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHF 267
           IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHF
Sbjct: 153 IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHF 212

Query: 268 VESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           VESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAF+
Sbjct: 213 VESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

[Close]

BLAST of CcUC06G120550 vs. ExPASy TrEMBL
Match: A0A1S3CMX2 (GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103502728 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 2.8e-126
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 88  PQALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 147
           P ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC
Sbjct: 33  PMALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNC 92

Query: 148 GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIP 207
           GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIP
Sbjct: 93  GKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIP 152

Query: 208 IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHF 267
           IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHF
Sbjct: 153 IVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHF 212

Query: 268 VESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           VESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAF+
Sbjct: 213 VESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

[Close]

BLAST of CcUC06G120550 vs. ExPASy TrEMBL
Match: A0A7J9BN66 (GTP-binding nuclear protein OS=Gossypium gossypioides OX=34282 GN=Gogos_011081 PE=3 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 1.1e-125
Identity = 217/221 (98.19%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 89  QALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 148
           QALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 15  QALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 74

Query: 149 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 208
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 75  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 134

Query: 209 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 268
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFV
Sbjct: 135 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 194

Query: 269 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAF+
Sbjct: 195 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 235

[Close]

BLAST of CcUC06G120550 vs. ExPASy TrEMBL
Match: A0A5D3CU46 (GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00290 PE=3 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.4e-125
Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 89  QALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 148
           +ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 2   RALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 61

Query: 149 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 208
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 62  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 121

Query: 209 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 268
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFV
Sbjct: 122 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 181

Query: 269 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAF+
Sbjct: 182 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222

[Close]

BLAST of CcUC06G120550 vs. TAIR 10
Match: AT5G55190.1 (RAN GTPase 3 )

HSP 1 Score: 449.9 bits (1156), Expect = 1.7e-126
Identity = 213/220 (96.82%), Postives = 217/220 (98.64%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           SPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDDD F+
Sbjct: 182 SPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of CcUC06G120550 vs. TAIR 10
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2 )

HSP 1 Score: 448.0 bits (1151), Expect = 6.3e-126
Identity = 210/220 (95.45%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           SPALAPPEVH+D+AAQQQ+EA+LAAAA+QPLPDDDDDAF+
Sbjct: 182 SPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of CcUC06G120550 vs. TAIR 10
Match: AT5G20010.1 (RAS-related nuclear protein-1 )

HSP 1 Score: 439.1 bits (1128), Expect = 2.9e-123
Identity = 206/220 (93.64%), Postives = 215/220 (97.73%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK
Sbjct: 2   ALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV
Sbjct: 62  IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFVE
Sbjct: 122 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFD 310
           +PALAPPEVHID+A QQ++EAEL  AA+QPLPDDDDD F+
Sbjct: 182 TPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of CcUC06G120550 vs. TAIR 10
Match: AT5G55080.1 (ras-related nuclear protein 4 )

HSP 1 Score: 303.9 bits (777), Expect = 1.5e-82
Identity = 144/211 (68.25%), Postives = 170/211 (80.57%), Query Frame = 0


Query: 90  ALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGK 149
           ALP+Q+ VD P+FKL+IVGDGGTGKTTF+KRHLTGEFE   EPT+GV+++PLDFFTN GK
Sbjct: 2   ALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGK 61

Query: 150 IRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV 209
           IRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPIV
Sbjct: 62  IRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPIV 121

Query: 210 LCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVE 269
           LCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AGD  + FVE
Sbjct: 122 LCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFVE 181

Query: 270 SPALAPPEVHIDLAAQQQHEAELAAAASQPL 301
           S     PE  ID    +  +     A +QPL
Sbjct: 182 S-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of CcUC06G120550 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 105.5 bits (262), Expect = 7.6e-23
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 102 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 161
           FKLV +GD   GKT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE
Sbjct: 10  FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

Query: 162 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VK 221
           +F  L   Y      AI+++DV+ R T+ N   W  D+ R     N+ IVL GNK D V+
Sbjct: 70  RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129

Query: 222 NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 262
            RQV   +     K+  + + E SAK N+N +  F  +A  L G
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173

The following BLAST results are available for this feature:

BLAST of CcUC06G120550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879205.1	4.5e-126	99.55	GTP-binding nuclear protein Ran1B [Benincasa hispida]	[more]
BAP11912.1	4.5e-126	99.55	Ran-GTPase [Citrullus lanatus] >BAR79436.1 Ran-GTPase [Citrullus lanatus]	[more]
XP_008465001.1	5.9e-126	98.65	PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis melo] >KAA0046737.1 G...	[more]
XP_011656253.2	1.3e-125	99.09	GTP-binding nuclear protein Ran1B [Cucumis sativus] >KGN65576.2 hypothetical pro...	[more]
KAG7023545.1	2.2e-125	93.64	GTP-binding nuclear protein Ran-3, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CcUC06G120550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P41918	1.8e-125	96.82	GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 S...	[more]
Q8H156	2.3e-125	96.82	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
P41917	8.8e-125	95.45	GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 S...	[more]
A2WSI7	1.1e-122	94.09	GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1...	[more]
Q7F7I7	1.1e-122	94.09	GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of CcUC06G120550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A068PXN5	2.2e-126	99.55	GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan1 PE=2 SV=1	[more]
A0A5A7TXX0	2.8e-126	98.65	GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3CMX2	2.8e-126	98.65	GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103502728 PE=3 SV=1	[more]
A0A7J9BN66	1.1e-125	98.19	GTP-binding nuclear protein OS=Gossypium gossypioides OX=34282 GN=Gogos_011081 P...	[more]
A0A5D3CU46	1.4e-125	98.64	GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]

BLAST of CcUC06G120550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55190.1	1.7e-126	96.82	RAN GTPase 3	[more]
AT5G20020.1	6.3e-126	95.45	RAS-related GTP-binding nuclear protein 2	[more]
AT5G20010.1	2.9e-123	93.64	RAS-related nuclear protein-1	[more]
AT5G55080.1	1.5e-82	68.25	ras-related nuclear protein 4	[more]
AT4G39890.1	7.6e-23	36.59	RAB GTPase homolog H1C	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 115..129 score: 95.13 coord: 162..180 score: 89.88 coord: 182..203 score: 86.19 coord: 218..236 score: 81.38 coord: 256..278 score: 76.76
IPR002041	Ran GTPase	PANTHER	PTHR24071	RAN GTPASE	coord: 63..309
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 95..259 score: 30.014019
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 102..262 e-value: 2.0E-27 score: 107.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 99..262 e-value: 5.8E-18 score: 75.7
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 107..308 e-value: 4.0E-168 score: 574.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..309
None	No IPR available	PANTHER	PTHR24071:SF19	GTP-BINDING NUCLEAR PROTEIN	coord: 63..309
None	No IPR available	PROSITE	PS51419	RAB	coord: 96..309 score: 19.426262
None	No IPR available	CDD	cd00877	Ran	coord: 102..267 e-value: 1.54439E-135 score: 378.953
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 104..258 e-value: 1.2E-8 score: -8.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 103..259 e-value: 1.3E-49 score: 167.9
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 93..293 score: 9.791642
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 92..307 e-value: 2.4E-68 score: 231.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 102..282
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 102..252 e-value: 1.8E-24 score: 84.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G120550.1	CcUC06G120550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding