CcUC06G120540 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G120540
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	GTP-binding nuclear protein
Location	CicolChr06: 22310441 .. 22313200 (-)
RNA-Seq Expression	CcUC06G120540
Synteny	CcUC06G120540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAAATTTTGGAATACTAATAAATGAATAAATTTGGAGGAAAAAAGAAACTCCGGGGTGCTCACCGTATAAGCCCTCGTCCTCAAATCTCAACTTACTTTAACCTAAATCGCCGATACCTTCCTCTCGCTTTCGTTTTCCAATGGTGGGTACTCTCTTTTACTCTCACTTCTTCATCCTTTTACTTTTCTGGGTATTTTGTTGATTCTATTTTGTGTTGAATTTCGTAGGCTTTGCCGGACCAGAAGACTGTTGATTATCCGAGTTTCAAGCTTGTTATTGTTGGTGATGGTGGCACTGGTATGTTGTTTTTTTTTTTTTCTGAGTTTTCTTTCAACATAGCTGTATCATATCTTATGGTGATAGCAAAACAATATGTCATTTCGGATGTAAATTGGTCTTTGCTAGCTGGTAGTACTAGTTTGAGCTTGGAGTGCGAAGTAGAGAGCTTTAAAACTTGAAACTGTGTTCATAGCGTAAGATTTTAACAAAAAATGGACGGGGGATTGGATTCCTGTTCTGAATGAAAACTTGTCTATGATTTATTAGGATTTTAAATTTTGGTTCATGGGTATTCAAGATTGATTCTTTTAACATTGTAAATAATCCAGTTCAACTTCTAATCTTTTTGGCTGAGATCATTTGAACATGCAATTTTGCCCCTCTTCGTTGTCGTTTGTTGGTTCTCCGTAAAAATTTGAAAATTCATGACATTGCCTTGTAGTTGAGGATGCTAAAACGGTAATAAGAGAGGAAGAAAGAACAAAAAAAGATTCATGAATTAGAATATTAGATTTGGTTAATCTAGGTAGATGTTGATTATTTGTATTGCTTCAGTTTGAAGGATCTTTCTTCGTCAAGATGGAATCATATAATACTTGATAAGACTTGAAATTGAATTGATTACGTTTTTGTTGCTCAGGAAAAACAACATTTGTGAAAAGACATCTCACAGGGGAGTTTGAAAAGAAATACGAACGTAAGAATTATCATAATTTTTCCCCATTTTGTGGTTTATTCATTATTTGGATTTTATTTAAAATAAACAAACAACTTATAATTATGAATTTGTTCTGTTTCTTTGAACTTTTAGCAACCATTGGTGTGGAGGTGCACCCATTGGACTTCTTCACTAACTGTGGAAAAATTAGATTTTACTGTTGGGACACTGCTGGGCAGGAGAAATTTGGTGGTTTACGTGATGGCTACTAGTAAGTTAGAGAATTAGTTCATTTATTGTTTTGGATGTATTTTTATTCTCTCTTCCCCATTATATACTCTTGCACCATTTCCTCGTTTGTGTAGGGAGTCTGTTTTGATTACTGTTTACTCTGAACAATATTGTTGAATTTTCAATATTCTCTTGCACGATTTGATAGATTATTTTGTATCTTTACTGCCTCTATGGGCCTTCTTTGAGAGTCTTGTTATGACGTGGTATTATTTTTCATGAGGGACTTCCATTTCTGTTCTGATTTCAGTTACCTCCTACCGCTGAAATTCCTTATTTTGTGTCTTGATTGCAGCATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATATAAAAATGTTCCGACGTGGCACCGTGATCTTTGCAGGTAATCTAACATTTGTTTGTATGAAACAAATTGTATATGAATGAATTGTTGTATTGTCAGTTCCCAGTGCAGTCTTCTTGAAGTTTCTTACCATTTGATGAGTTGATAACTTGCAGAGTGTGTGAGAATATTCCAATAGTTCTTTGTGGAAACAAGGTCGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCTGCAAAGAGTAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGAAAGTTAGCTGGGTAAATCCAGTTCCCGGTTTACTTCTATTACTTTTTTCTTTAATGTGGGAACTTTCATGACAATGGACTTCCTTTTCTTATGGCGACCCAGGGATCCAAACATTCATTTCGTGGAATCTCCAGCTCTGGCTCCTCCTGAAGTACACATTGATTTGGCTGCCCAGCAACAGTGAGACTTTCTCGTCCTAAGACATTACTAATGAACCATTCACAATCTTTGGAGTAATCCATATCCATATGTTGCTATTTCTGCAGGCATGAAGCTGAATTAGCGGCAGCAGCAAGTCAACCTCTTCCCGACGACGACGACGACGCGTTCGAGTAAAAATGTGGTGATGATGCTCTTTGCTTGTCTATTTTCTACTGTTGCCATCCGAGTAAGATATTTTGTCCATGCTAGGATTTACAGAAGGGAATAGGTGGGCGGAGGGTGTGGCTGAGGATTGAAACTTGAACTATGAAAATGTTAGTTTTCCCCCGGGATGAAAGAAAATTGTGGTGTAGTTGGATGGTTTCTGTTGGTGAGATTCGCTTATCGATTAATAGAGAGCCACATGGCCTCCGATGAAAGTTCGTTATAAAGAATTTCTGTGTAGTGTTTTCCACTATTTGATTTGTGTTGGTTTTCCCTTTCTTTTTTATCTTTCATCTTTGGGGTTTATCTTTTGGTGCGAAGTGTGAACCACATCAGAGTTTGAAATCGAGATTCTCTACCTTCTTTTGGTGTGTTTGTTAGTGTTAGGGGCATGTAAGGATTAATGTGGTTTTTAGTTATGATGAATTGGGTGGTGAAAGGTTTTTTTTTCTTTTCTTTTCTTTTCGTAACAACTTCGAAAAGTGCCCGTGGT

mRNA sequence

ATTAAATTTTGGAATACTAATAAATGAATAAATTTGGAGGAAAAAAGAAACTCCGGGGTGCTCACCGTATAAGCCCTCGTCCTCAAATCTCAACTTACTTTAACCTAAATCGCCGATACCTTCCTCTCGCTTTCGTTTTCCAATGGCTTTGCCGGACCAGAAGACTGTTGATTATCCGAGTTTCAAGCTTGTTATTGTTGGTGATGGTGGCACTGGAAAAACAACATTTGTGAAAAGACATCTCACAGGGGAGTTTGAAAAGAAATACGAACCAACCATTGGTGTGGAGGTGCACCCATTGGACTTCTTCACTAACTGTGGAAAAATTAGATTTTACTGTTGGGACACTGCTGGGCAGGAGAAATTTGGTGGTTTACGTGATGGCTACTACATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATATAAAAATGTTCCGACGTGGCACCGTGATCTTTGCAGAGTGTGTGAGAATATTCCAATAGTTCTTTGTGGAAACAAGGTCGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCTGCAAAGAGTAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGAAAGTTAGCTGGGGATCCAAACATTCATTTCGTGGAATCTCCAGCTCTGGCTCCTCCTGAAGTACACATTGATTTGGCTGCCCAGCAACAGCATGAAGCTGAATTAGCGGCAGCAGCAAGTCAACCTCTTCCCGACGACGACGACGACGCGTTCGAGTAAAAATGTGGTGATGATGCTCTTTGCTTGTCTATTTTCTACTGTTGCCATCCGAGTAAGATATTTTGTCCATGCTAGGATTTACAGAAGGGAATAGGTGGGCGGAGGGTGTGGCTGAGGATTGAAACTTGAACTATGAAAATGTTAGTTTTCCCCCGGGATGAAAGAAAATTGTGGTGTAGTTGGATGGTTTCTGTTGGTGAGATTCGCTTATCGATTAATAGAGAGCCACATGGCCTCCGATGAAAGTTCGTTATAAAGAATTTCTGTGTAGTGTTTTCCACTATTTGATTTGTGTTGGTTTTCCCTTTCTTTTTTATCTTTCATCTTTGGGGTTTATCTTTTGGTGCGAAGTGTGAACCACATCAGAGTTTGAAATCGAGATTCTCTACCTTCTTTTGGTGTGTTTGTTAGTGTTAGGGGCATGTAAGGATTAATGTGGTTTTTAGTTATGATGAATTGGGTGGTGAAAGGTTTTTTTTTCTTTTCTTTTCTTTTCGTAACAACTTCGAAAAGTGCCCGTGGT

Coding sequence (CDS)

ATGGCTTTGCCGGACCAGAAGACTGTTGATTATCCGAGTTTCAAGCTTGTTATTGTTGGTGATGGTGGCACTGGAAAAACAACATTTGTGAAAAGACATCTCACAGGGGAGTTTGAAAAGAAATACGAACCAACCATTGGTGTGGAGGTGCACCCATTGGACTTCTTCACTAACTGTGGAAAAATTAGATTTTACTGTTGGGACACTGCTGGGCAGGAGAAATTTGGTGGTTTACGTGATGGCTACTACATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATATAAAAATGTTCCGACGTGGCACCGTGATCTTTGCAGAGTGTGTGAGAATATTCCAATAGTTCTTTGTGGAAACAAGGTCGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCTGCAAAGAGTAACTACAACTTTGAAAAACCATTCCTGTACTTGGCCAGAAAGTTAGCTGGGGATCCAAACATTCATTTCGTGGAATCTCCAGCTCTGGCTCCTCCTGAAGTACACATTGATTTGGCTGCCCAGCAACAGCATGAAGCTGAATTAGCGGCAGCAGCAAGTCAACCTCTTCCCGACGACGACGACGACGCGTTCGAGTAA

Protein sequence

MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE

Homology

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BLAST of CcUC06G120540 vs. NCBI nr
Match: BAP11912.1 (Ran-GTPase [Citrullus lanatus] >BAR79436.1 Ran-GTPase [Citrullus lanatus])

HSP 1 Score: 465.7 bits (1197), Expect = 2.2e-127
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

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BLAST of CcUC06G120540 vs. NCBI nr
Match: XP_038879205.1 (GTP-binding nuclear protein Ran1B [Benincasa hispida])

HSP 1 Score: 463.0 bits (1190), Expect = 1.4e-126
Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAEL AAASQPLPDDDDDAF+
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 221

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BLAST of CcUC06G120540 vs. NCBI nr
Match: XP_008465001.1 (PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis melo] >KAA0046737.1 GTP-binding nuclear protein Ran-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 462.6 bits (1189), Expect = 1.9e-126
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 34  MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 93

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 94  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 153

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFV
Sbjct: 154 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 213

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 214 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

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BLAST of CcUC06G120540 vs. NCBI nr
Match: XP_008465002.1 (PREDICTED: GTP-binding nuclear protein Ran-3 [Cucumis melo] >XP_038879204.1 GTP-binding nuclear protein Ran-3 [Benincasa hispida] >KAA0046738.1 GTP-binding nuclear protein Ran-3 [Cucumis melo var. makuwa] >TYK14515.1 GTP-binding nuclear protein Ran-3 [Cucumis melo var. makuwa])

HSP 1 Score: 462.6 bits (1189), Expect = 1.9e-126
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

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BLAST of CcUC06G120540 vs. NCBI nr
Match: XP_031256077.1 (GTP-binding nuclear protein Ran-3-like [Pistacia vera])

HSP 1 Score: 462.2 bits (1188), Expect = 2.5e-126
Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

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BLAST of CcUC06G120540 vs. ExPASy Swiss-Prot
Match: Q8H156 (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 453.8 bits (1166), Expect = 1.2e-126
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

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BLAST of CcUC06G120540 vs. ExPASy Swiss-Prot
Match: P41917 (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 SV=3)

HSP 1 Score: 451.8 bits (1161), Expect = 4.4e-126
Identity = 212/221 (95.93%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVH+D+AAQQQ+EA+LAAAA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

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BLAST of CcUC06G120540 vs. ExPASy Swiss-Prot
Match: P41918 (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 5.7e-126
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP Q+ VDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPGQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDD+ F+
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221

[Close]

BLAST of CcUC06G120540 vs. ExPASy Swiss-Prot
Match: A2WSI7 (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1 PE=2 SV=2)

HSP 1 Score: 444.9 bits (1143), Expect = 5.3e-124
Identity = 209/221 (94.57%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           E+PALAPP+V IDLAAQQQHEAELAAAA+QPLPDDDDD  E
Sbjct: 181 ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of CcUC06G120540 vs. ExPASy Swiss-Prot
Match: Q7F7I7 (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAN1 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 5.3e-124
Identity = 209/221 (94.57%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           E+PALAPP+V IDLAAQQQHEAELAAAA+QPLPDDDDD  E
Sbjct: 181 ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]

BLAST of CcUC06G120540 vs. ExPASy TrEMBL
Match: A0A068PXN5 (GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan1 PE=2 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 1.1e-127
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of CcUC06G120540 vs. ExPASy TrEMBL
Match: A0A5A7TV42 (GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00300 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 9.1e-127
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of CcUC06G120540 vs. ExPASy TrEMBL
Match: A0A5A7TXX0 (GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00180 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 9.1e-127
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 34  MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 93

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 94  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 153

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFV
Sbjct: 154 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 213

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 214 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

[Close]

BLAST of CcUC06G120540 vs. ExPASy TrEMBL
Match: A0A1S3CMS7 (GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103502729 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 9.1e-127
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of CcUC06G120540 vs. ExPASy TrEMBL
Match: A0A1S3CMX2 (GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103502728 PE=3 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 9.1e-127
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 34  MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 93

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 94  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 153

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFV
Sbjct: 154 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 213

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 214 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

[Close]

BLAST of CcUC06G120540 vs. TAIR 10
Match: AT5G55190.1 (RAN GTPase 3 )

HSP 1 Score: 453.8 bits (1166), Expect = 8.2e-128
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of CcUC06G120540 vs. TAIR 10
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2 )

HSP 1 Score: 451.8 bits (1161), Expect = 3.1e-127
Identity = 212/221 (95.93%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVH+D+AAQQQ+EA+LAAAA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of CcUC06G120540 vs. TAIR 10
Match: AT5G20010.1 (RAS-related nuclear protein-1 )

HSP 1 Score: 443.0 bits (1138), Expect = 1.4e-124
Identity = 208/221 (94.12%), Postives = 216/221 (97.74%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           E+PALAPPEVHID+A QQ++EAEL  AA+QPLPDDDDD FE
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of CcUC06G120540 vs. TAIR 10
Match: AT5G55080.1 (ras-related nuclear protein 4 )

HSP 1 Score: 305.8 bits (782), Expect = 2.8e-83
Identity = 145/212 (68.40%), Postives = 171/212 (80.66%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+ VD P+FKL+IVGDGGTGKTTF+KRHLTGEFE   EPT+GV+++PLDFFTN G
Sbjct: 1   MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPI
Sbjct: 61  KIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AGD  + FV
Sbjct: 121 VLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPL 213
           ES     PE  ID    +  +     A +QPL
Sbjct: 181 ES-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of CcUC06G120540 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 105.5 bits (262), Expect = 5.5e-23
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 14  FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
           FKLV +GD   GKT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE
Sbjct: 10  FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

Query: 74  KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VK 133
           +F  L   Y      AI+++DV+ R T+ N   W  D+ R     N+ IVL GNK D V+
Sbjct: 70  RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129

Query: 134 NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 174
            RQV   +     K+  + + E SAK N+N +  F  +A  L G
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173

The following BLAST results are available for this feature:

BLAST of CcUC06G120540 vs. NCBI nr


Match Name	E-value	Identity	Description
BAP11912.1	2.2e-127	100.00	Ran-GTPase [Citrullus lanatus] >BAR79436.1 Ran-GTPase [Citrullus lanatus]	[more]
XP_038879205.1	1.4e-126	99.10	GTP-binding nuclear protein Ran1B [Benincasa hispida]	[more]
XP_008465001.1	1.9e-126	99.55	PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis melo] >KAA0046737.1 G...	[more]
XP_008465002.1	1.9e-126	99.55	PREDICTED: GTP-binding nuclear protein Ran-3 [Cucumis melo] >XP_038879204.1 GTP-...	[more]
XP_031256077.1	2.5e-126	99.10	GTP-binding nuclear protein Ran-3-like [Pistacia vera]	[more]

BLAST of CcUC06G120540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H156	1.2e-126	97.29	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
P41917	4.4e-126	95.93	GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 S...	[more]
P41918	5.7e-126	96.38	GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 S...	[more]
A2WSI7	5.3e-124	94.57	GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica OX=39946 GN=RAN1...	[more]
Q7F7I7	5.3e-124	94.57	GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RA...	[more]

BLAST of CcUC06G120540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A068PXN5	1.1e-127	100.00	GTP-binding nuclear protein OS=Citrullus lanatus OX=3654 GN=CLRan1 PE=2 SV=1	[more]
A0A5A7TV42	9.1e-127	99.55	GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7TXX0	9.1e-127	99.55	GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3CMS7	9.1e-127	99.55	GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103502729 PE=3 SV=1	[more]
A0A1S3CMX2	9.1e-127	99.55	GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103502728 PE=3 SV=1	[more]

BLAST of CcUC06G120540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55190.1	8.2e-128	97.29	RAN GTPase 3	[more]
AT5G20020.1	3.1e-127	95.93	RAS-related GTP-binding nuclear protein 2	[more]
AT5G20010.1	1.4e-124	94.12	RAS-related nuclear protein-1	[more]
AT5G55080.1	2.8e-83	68.40	ras-related nuclear protein 4	[more]
AT4G39890.1	5.5e-23	36.59	RAB GTPase homolog H1C	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 74..92 score: 89.88 coord: 168..190 score: 76.76 coord: 94..115 score: 86.19 coord: 130..148 score: 81.38 coord: 27..41 score: 95.13
IPR002041	Ran GTPase	PANTHER	PTHR24071	RAN GTPASE	coord: 1..221
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 7..171 score: 30.014019
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..170 e-value: 1.2E-8 score: -8.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..171 e-value: 5.1E-50 score: 169.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..205 score: 9.791642
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..174 e-value: 5.8E-18 score: 75.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..174 e-value: 2.0E-27 score: 107.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..220 e-value: 4.0E-168 score: 574.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..221
None	No IPR available	PANTHER	PTHR24071:SF19	GTP-BINDING NUCLEAR PROTEIN	coord: 1..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..221 score: 19.426262
None	No IPR available	CDD	cd00877	Ran	coord: 14..179 e-value: 2.12297E-134 score: 372.404
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..164 e-value: 7.2E-25 score: 85.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 4..219 e-value: 7.6E-69 score: 233.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G120540.1	CcUC06G120540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0000054	ribosomal subunit export from nucleus
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding