CcUC06G120360 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G120360
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	NADH dehydrogenase subunit 3
Location	CicolChr06: 21821565 .. 21824584 (+)
RNA-Seq Expression	CcUC06G120360
Synteny	CcUC06G120360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGCCGCTCCGCGATCAAGGAGCGAAAGAACCAAGTGGGCTGTGGTGATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCTGCTAGTTTCTTTGATCCCACTCGGTGTTCCTTTTCCATTTGCTTCCAATAGTTCAACCTATCCAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGCCGTTTCGATATATGATTTTATCTTGTTTCCATTTTATTTATGTGAAAAATTTGGGCATTTTGTGACTTTTTCCGTAAGGTTCCCGTAAGATCATGTTAGAAACCTTACGAGAAAAGTGACAGAATGCCCAAATTTCCCAAAAGTTCGAGTGTATTTGGGCATTCTGTCACTTTTTTCGTCAACTCTATCAACTTATGGAAAACATGAACTTACGAAGAAAATGACAGTGATCAAAACGGCATTCCGAATTCTTTTTCTTGATGATTTCAGACATTCCTACACATATTAGACCTTTTTTACATGAAAATTTTAGACTTTCTTTTTCGTTTTTTTACCGCGAACTATTCAAAAACCCAAAATTTTCAAAAATCAGCGTTTCAAAAAAAATTTTTATAGGTTTATTTCCAGAAAATCAGGTCATATGGGATGAGTTTTACAACAAATGACAGACATTAGATAGTATTAAAAAAAAAAGGACTCCTGTGAAGAGGATGGTTCGGGGAAGATATGGTTTGAGTGTTGAAGAACAAGATCTTTGAGGGTATTCACGCCATTTCACCATGTGGGACCCATCTCTGAAACTCTGAAAAGTTGAAAATAGGTTAGAAAAAGAATTTTTTAAAAAAGAGGTTAGTTTTGTCCTATCAAAAACTTTTTGGATTAGAAATAGCAATTTTTCAAAAAATGAAAGGTTTGATTTAAAAAGTTTTTGGCTACCACACATTGCGTGGGGAGAAACTAAAAACGTTTGCCCACGCTCCTTGCATGGGGAGAAACTAAAATAAAAGTCACCAAAAATCCAATTTAATGATTTTTACTAAGACCACACAACTTTTTGCCCACACATATGATTTCGTCGGTAGAAATGATGTTATGCCCACACATAGAAAATTAGTTGGGAGAAATTAGCTCTCTTAATTATCAATTTATTGACTCTAAAAAATTGTCACTCTTTAATGATTGTTAATTTTAGTCATAAATTTTTGACACAAAAGAAAAGTCAAAATAGACAAAATGTGTGTGTGTGTGTGAAATTTTTCGTCTTTTCCCTCCAAATTGTACTCCATTAAAAAAAAAACATTTCAATAACCAAAAAGGTAAAAAATAATTCAAACACCAAAATGTTTAAAAGCAAGTATCGTAATAAAGCCCAAAATGATGTCGTTTAACCTTTAAGAAAAATGTCATCATTTTAAGTAATAGCAAAGCCCAAAATTACTTCGATTGCTCGGCACTCTTTAAGATGTAATTTTGGGTTAAGGCAATTTGCTAAAAAAGCTATATTTTTTAAAGGCTAAGGTGAGTTACAATTTAAAAAATATATTTTATAAAGTTTTTTTTTTTTAAGAATTAAAAATGTTGAGTTAAAAAAAATTAAATTGAAAAGAAATATAACTATTTGTTTTTTTTGCTTGCGCAGTCAACAGAGCCAACATGCATGAGTAAAAAAAACTCTTTACTCCTAATCTCTTTACTTATACAAATACAAAGAAGTGCTCATATATATATATATATACCTACTCACCATTCCTTAATTTTCCCATGTGGGACATAGATGATGTGAGTCATTCCCAACAGGTTTTTTTAAAAACACTTCTTTTCTCTTGTCAATCTAAACATGCCCTCAATTTATCTAACACTATGATTAGTTTTTTCTGTTTTAATGCTTTTTAATAATAACTAATACGAGGCATAGATTGACAAAAAAAAAAAAAAAAAAGACNCTCACCATTCCTTAATTTTCCCATGTGGGACATAGATGATGTGAGTCATTCCCAACAGGTTTTTTTAAAAACACTTCTTTTCTCTTGTCAATCTAAACATGCCCTCAATTTATCTAACACTATGATTAGTTTTTTCTGTTTTAATGCTTTTTAATAATAACTAATACGAGGCATAGATTGACAAAAAAAAAAAAAAAATAGTCATAAAAGTTGAAATATTAAAAGGATTTTAATGATTGAAAAAAAAATGTCACGATTTAATGACTATTAATTGTAATCATAATTTGGTGACACAAAAAAAATGTCAAAGTAGTCGAAAAATTCGAAATTTCGTGTCTTTTCCCGCTAGAATTGCGCCTTTTTCATATACTCACATTTAATGACTGCTTTTTTCAGTCATAAATTAATGACACAAAAAAACAGCATGTAGTCCGAAAAATCCAGTTCGCTTTTTCCCATAAAAAACGCGTGATTTTGGCTTTAATGAATATTTTTTCACTTTCTCCTCTATTTCTGCCACTGTTCAAGGGTCATGAAATGTGGAATTTGTTGAAGTGGTGTTCCAAAGATAAGTCATGTATTACTTGTTGGAAGTATTTCCTATTTGTACGTGAGTTGGTGAGAAGAAGAATTCTCAAGAGCATCCTAATTGTTATGTTTATCCAAGTGATTTATGTTCTCTGTAATTTATGTTTTTCAAAAGAAATTTAATAGCAAATGCAATCACTCGCTTCCGTTGAGGATTCAATTCCTTCGGTAGATAGGTTGTTCCCTTAAGGCTTCACCCTCTCATTAATTAGAATTTTTAAAATTTTTTGTGTACTAAAATAATACTATAAATTATCCACACGCATCAAACGTTTTATGAGCTAATATTTTTTTAAAAAAACAAAAGGTGTGATAACTGTAGTTGAATAACTAAGTGGACTGAAAAAAAAAAAAGAATAGGCGTAATAATAAATAGAAGTAGTATGAAAAAATTTCATAGTTCAATAACATTATAGTTGTTTTGGTTCAAGGTTTACATACACCCAAATAGTTTTCATTTTATAATTAGAAACAAATTACACAAATGTTACAAGCTAA

mRNA sequence

TATGCCGCTCCGCGATCAAGGAGCGAAAGAACCAAGTGGGCTGTGGTGATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCTGCTAGTTTCTTTGATCCCACTCGGTGTTCCTTTTCCATTTGCTTCCAATAGTTCAACCTATCCAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGCCAAACAAATTACACAAATGTTACAAGCTAA

Coding sequence (CDS)

TATGCCGCTCCGCGATCAAGGAGCGAAAGAACCAAGTGGGCTGTGGTGATGTCAGAATTTGCACCTATTTGTATCTATTTAGTGATCAGTCTGCTAGTTTCTTTGATCCCACTCGGTGTTCCTTTTCCATTTGCTTCCAATAGTTCAACCTATCCAGAAAAATTGTCGGCCTATGAATGTGGTTTCGATCCTTCCGGTGATGCCAGAAGCCAAACAAATTACACAAATGTTACAAGCTAA

Protein sequence

YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSQTNYTNVTS

Homology

[Close]

BLAST of CcUC06G120360 vs. NCBI nr
Match: KAF1863087.1 (hypothetical protein Lal_00041074 [Lupinus albus])

HSP 1 Score: 135.6 bits (340), Expect = 1.9e-28
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYEC 60
           YAAPR+RSERTKW VVMSEFAPICIYLVISLLVSLIPLG+PFPFASNSSTYPEKLSAYEC
Sbjct: 135 YAAPRARSERTKWVVVMSEFAPICIYLVISLLVSLIPLGLPFPFASNSSTYPEKLSAYEC 194

Query: 61  GFDPSGDARSQ 72
           GFDP GDARS+
Sbjct: 195 GFDPFGDARSR 205

[Close]

BLAST of CcUC06G120360 vs. NCBI nr
Match: KAA0065512.1 (ribosomal protein S12C [Cucumis melo var. makuwa])

HSP 1 Score: 135.2 bits (339), Expect = 2.5e-28
Identity = 66/71 (92.96%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYEC 60
          YAAPRSRSER+KWAVVMSEFAPICIYLVIS LVSLIPLG+PFPFASNS+TYPEKLSAYEC
Sbjct: 12 YAAPRSRSERSKWAVVMSEFAPICIYLVISPLVSLIPLGLPFPFASNSATYPEKLSAYEC 71

Query: 61 GFDPSGDARSQ 72
          GFDPSGDARS+
Sbjct: 72 GFDPSGDARSR 82

[Close]

BLAST of CcUC06G120360 vs. NCBI nr
Match: GEV07194.1 (NADH dehydrogenase subunit 3, mitochondrial [Tanacetum cinerariifolium])

HSP 1 Score: 134.4 bits (337), Expect = 4.2e-28
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1    YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYEC 60
            YAAPR+RSE+TKWAVVMSEFAPICIYLVIS LVSLIPLGVPFPFASNSSTYPEKLSAYEC
Sbjct: 1075 YAAPRARSEKTKWAVVMSEFAPICIYLVISPLVSLIPLGVPFPFASNSSTYPEKLSAYEC 1134

Query: 61   GFDPSGDARSQ 72
            GFDP GDARS+
Sbjct: 1135 GFDPFGDARSR 1145

[Close]

BLAST of CcUC06G120360 vs. NCBI nr
Match: RYQ97533.1 (hypothetical protein Ahy_B08g093601 [Arachis hypogaea])

HSP 1 Score: 130.6 bits (327), Expect = 6.1e-27
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYEC 60
          YAAPR+R ERTKWAVVMSEFAPICI LVISLLVSLIPLGVPFPFASNS TYPEKLSAYEC
Sbjct: 13 YAAPRARGERTKWAVVMSEFAPICISLVISLLVSLIPLGVPFPFASNSWTYPEKLSAYEC 72

Query: 61 GFDPSGDARSQ 72
          GFDP GDARS+
Sbjct: 73 GFDPFGDARSR 83

[Close]

BLAST of CcUC06G120360 vs. NCBI nr
Match: CAB4075863.1 (unnamed protein product [Lactuca saligna] >CAB4076136.1 unnamed protein product [Lactuca saligna] >CAB4076252.1 unnamed protein product [Lactuca saligna] >CAB4076288.1 unnamed protein product [Lactuca saligna] >CAB4076627.1 unnamed protein product [Lactuca saligna])

HSP 1 Score: 130.2 bits (326), Expect = 7.9e-27
Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1   YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYEC 60
           YAAPR+RSE+TKWAVVMSEFAPI IYLVIS LVSLIPLGVPFPFASNSSTYPEKLSAYEC
Sbjct: 76  YAAPRARSEKTKWAVVMSEFAPIFIYLVISPLVSLIPLGVPFPFASNSSTYPEKLSAYEC 135

Query: 61  GFDPSGDARSQ 72
           GFDP GDARS+
Sbjct: 136 GFDPFGDARSR 146

[Close]

BLAST of CcUC06G120360 vs. ExPASy Swiss-Prot
Match: P27062 (NADH-ubiquinone oxidoreductase chain 3 OS=Panax ginseng OX=4054 GN=ND3 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.2e-23
Identity = 53/55 (96.36%), Postives = 55/55 (100.00%), Query Frame = 0


Query: 17 MSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSQ 72
          MSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYP+KLSAYECGFDPSGDARS+
Sbjct: 1  MSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPDKLSAYECGFDPSGDARSR 55

[Close]

BLAST of CcUC06G120360 vs. ExPASy Swiss-Prot
Match: Q36664 (NADH-ubiquinone oxidoreductase chain 3 OS=Pinus sylvestris OX=3349 GN=NAD3 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-20
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 17 MSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSQ 72
          MSEFAPICIYLVISLLV LIPLGVPF FASN STYPEKLSAYECGFDP GDARS+
Sbjct: 1  MSEFAPICIYLVISLLVCLIPLGVPFLFASNGSTYPEKLSAYECGFDPFGDARSR 55

[Close]

BLAST of CcUC06G120360 vs. ExPASy Swiss-Prot
Match: P60159 (NADH-ubiquinone oxidoreductase chain 3 OS=Helianthus annuus OX=4232 GN=ND3 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.5e-20
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 17 MSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSQ 72
          M EFAPICIYLVISLLVSLI LGVPF FASNSSTYPEKLSAYECGFDP GDARS+
Sbjct: 1  MLEFAPICIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDARSR 55

[Close]

BLAST of CcUC06G120360 vs. ExPASy Swiss-Prot
Match: P16265 (NADH-ubiquinone oxidoreductase chain 3 OS=Zea mays OX=4577 GN=ND3 PE=2 SV=3)

HSP 1 Score: 97.4 bits (241), Expect = 7.5e-20
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 17 MSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSQ 72
          M EFAPICIYLVISLLVSLI LGVPF FASNSSTYPEKLSAYECGFDP GDARS+
Sbjct: 1  MLEFAPICIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDARSR 55

[Close]

BLAST of CcUC06G120360 vs. ExPASy Swiss-Prot
Match: P60160 (NADH-ubiquinone oxidoreductase chain 3 OS=Triticum aestivum OX=4565 GN=ND3 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 7.5e-20
Identity = 50/55 (90.91%), Postives = 51/55 (92.73%), Query Frame = 0


Query: 17 MSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSQ 72
          M EFAPICIYLVISLLVSLI LGVPF FASNSSTYPEKLSAYECGFDP GDARS+
Sbjct: 1  MLEFAPICIYLVISLLVSLILLGVPFLFASNSSTYPEKLSAYECGFDPFGDARSR 55

[Close]

BLAST of CcUC06G120360 vs. ExPASy TrEMBL
Match: A0A6A5LPN8 (NADH dehydrogenase subunit 3 OS=Lupinus albus OX=3870 GN=Lal_00041074 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.2e-29
Identity = 66/71 (92.96%), Postives = 69/71 (97.18%), Query Frame = 0


Query: 1   YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYEC 60
           YAAPR+RSERTKW VVMSEFAPICIYLVISLLVSLIPLG+PFPFASNSSTYPEKLSAYEC
Sbjct: 135 YAAPRARSERTKWVVVMSEFAPICIYLVISLLVSLIPLGLPFPFASNSSTYPEKLSAYEC 194

Query: 61  GFDPSGDARSQ 72
           GFDP GDARS+
Sbjct: 195 GFDPFGDARSR 205

[Close]

BLAST of CcUC06G120360 vs. ExPASy TrEMBL
Match: A0A5A7VB34 (NADH dehydrogenase subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46348G00010 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-28
Identity = 66/71 (92.96%), Postives = 70/71 (98.59%), Query Frame = 0


Query: 1  YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYEC 60
          YAAPRSRSER+KWAVVMSEFAPICIYLVIS LVSLIPLG+PFPFASNS+TYPEKLSAYEC
Sbjct: 12 YAAPRSRSERSKWAVVMSEFAPICIYLVISPLVSLIPLGLPFPFASNSATYPEKLSAYEC 71

Query: 61 GFDPSGDARSQ 72
          GFDPSGDARS+
Sbjct: 72 GFDPSGDARSR 82

[Close]

BLAST of CcUC06G120360 vs. ExPASy TrEMBL
Match: A0A444Y6J8 (NADH dehydrogenase subunit 3 OS=Arachis hypogaea OX=3818 GN=Ahy_B08g093601 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.9e-27
Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 1  YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYEC 60
          YAAPR+R ERTKWAVVMSEFAPICI LVISLLVSLIPLGVPFPFASNS TYPEKLSAYEC
Sbjct: 13 YAAPRARGERTKWAVVMSEFAPICISLVISLLVSLIPLGVPFPFASNSWTYPEKLSAYEC 72

Query: 61 GFDPSGDARSQ 72
          GFDP GDARS+
Sbjct: 73 GFDPFGDARSR 83

[Close]

BLAST of CcUC06G120360 vs. ExPASy TrEMBL
Match: A0A6S7L7V2 (NADH dehydrogenase subunit 3 OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS4628 PE=3 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.8e-27
Identity = 65/71 (91.55%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 1   YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYEC 60
           YAAPR+RSE+TKWAVVMSEFAPI IYLVIS LVSLIPLGVPFPFASNSSTYPEKLSAYEC
Sbjct: 76  YAAPRARSEKTKWAVVMSEFAPIFIYLVISPLVSLIPLGVPFPFASNSSTYPEKLSAYEC 135

Query: 61  GFDPSGDARSQ 72
           GFDP GDARS+
Sbjct: 136 GFDPFGDARSR 146

[Close]

BLAST of CcUC06G120360 vs. ExPASy TrEMBL
Match: A0A151UDJ4 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_048847 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.9e-26
Identity = 64/73 (87.67%), Postives = 67/73 (91.78%), Query Frame = 0


Query: 1  YAAPRSRSERTKWAVVMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYEC 60
          YAAP +RSERTKW VVMSEFAPICIYLVISLLVSLI LG+PFPFASNSSTYPEKLSAYEC
Sbjct: 4  YAAPPARSERTKWFVVMSEFAPICIYLVISLLVSLILLGLPFPFASNSSTYPEKLSAYEC 63

Query: 61 GFDPSGDARSQTN 74
          GFDP GDARS  +
Sbjct: 64 GFDPFGDARSHNS 76

[Close]

BLAST of CcUC06G120360 vs. TAIR 10
Match: AT2G07751.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein )

HSP 1 Score: 102.1 bits (253), Expect = 2.2e-22
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0


Query: 17 MSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSQ 72
          MSEFAPI IYLVISLLVSLI LGVPFPFASNSSTYPEKLSAYECGFDPSGDARS+
Sbjct: 1  MSEFAPISIYLVISLLVSLILLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSR 55

[Close]

BLAST of CcUC06G120360 vs. TAIR 10
Match: ATMG00990.1 (NADH dehydrogenase 3 )

HSP 1 Score: 102.1 bits (253), Expect = 2.2e-22
Identity = 52/56 (92.86%), Postives = 54/56 (96.43%), Query Frame = 0


Query: 16 VMSEFAPICIYLVISLLVSLIPLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSQ 72
          +MSEFAPI IYLVISLLVSLI LGVPFPFASNSSTYPEKLSAYECGFDPSGDARS+
Sbjct: 1  MMSEFAPISIYLVISLLVSLILLGVPFPFASNSSTYPEKLSAYECGFDPSGDARSR 56

The following BLAST results are available for this feature:

BLAST of CcUC06G120360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF1863087.1	1.9e-28	92.96	hypothetical protein Lal_00041074 [Lupinus albus]	[more]
KAA0065512.1	2.5e-28	92.96	ribosomal protein S12C [Cucumis melo var. makuwa]	[more]
GEV07194.1	4.2e-28	92.96	NADH dehydrogenase subunit 3, mitochondrial [Tanacetum cinerariifolium]	[more]
RYQ97533.1	6.1e-27	91.55	hypothetical protein Ahy_B08g093601 [Arachis hypogaea]	[more]
CAB4075863.1	7.9e-27	91.55	unnamed protein product [Lactuca saligna] >CAB4076136.1 unnamed protein product ...	[more]

BLAST of CcUC06G120360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27062	3.2e-23	96.36	NADH-ubiquinone oxidoreductase chain 3 OS=Panax ginseng OX=4054 GN=ND3 PE=3 SV=1	[more]
Q36664	1.2e-20	90.91	NADH-ubiquinone oxidoreductase chain 3 OS=Pinus sylvestris OX=3349 GN=NAD3 PE=2 ...	[more]
P60159	7.5e-20	90.91	NADH-ubiquinone oxidoreductase chain 3 OS=Helianthus annuus OX=4232 GN=ND3 PE=2 ...	[more]
P16265	7.5e-20	90.91	NADH-ubiquinone oxidoreductase chain 3 OS=Zea mays OX=4577 GN=ND3 PE=2 SV=3	[more]
P60160	7.5e-20	90.91	NADH-ubiquinone oxidoreductase chain 3 OS=Triticum aestivum OX=4565 GN=ND3 PE=2 ...	[more]

BLAST of CcUC06G120360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A5LPN8	9.2e-29	92.96	NADH dehydrogenase subunit 3 OS=Lupinus albus OX=3870 GN=Lal_00041074 PE=3 SV=1	[more]
A0A5A7VB34	1.2e-28	92.96	NADH dehydrogenase subunit 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A444Y6J8	2.9e-27	91.55	NADH dehydrogenase subunit 3 OS=Arachis hypogaea OX=3818 GN=Ahy_B08g093601 PE=3 ...	[more]
A0A6S7L7V2	3.8e-27	91.55	NADH dehydrogenase subunit 3 OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS4628 PE=3 ...	[more]
A0A151UDJ4	1.9e-26	87.67	Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_048847 PE=3 S...	[more]

BLAST of CcUC06G120360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G07751.1	2.2e-22	94.55	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein	[more]
ATMG00990.1	2.2e-22	92.86	NADH dehydrogenase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038430	NADH:ubiquinone oxidoreductase, subunit 3 superfamily	GENE3D	1.20.58.1610	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	coord: 3..76 e-value: 4.1E-12 score: 48.0
IPR000440	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	PANTHER	PTHR11058	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3	coord: 17..72
None	No IPR available	PANTHER	PTHR11058:SF17	NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 3	coord: 17..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G120360.1	CcUC06G120360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0006412	translation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031966	mitochondrial membrane
cellular_component	GO:0070469	respirasome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0003735	structural constituent of ribosome