Homology
BLAST of CcUC06G120260 vs. NCBI nr
Match:
XP_038880665.1 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Benincasa hispida] >XP_038880666.1 pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Benincasa hispida] >XP_038880667.1 pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Benincasa hispida] >XP_038880668.1 pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Benincasa hispida])
HSP 1 Score: 1569.7 bits (4063), Expect = 0.0e+00
Identity = 783/840 (93.21%), Postives = 813/840 (96.79%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPRKPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEGHLR 60
MA+LPFP TNPLA LY PRKPH+SPTHFANLNQTAGNVQISYKSYLNQISSLCKE HLR
Sbjct: 1 MAALPFPALTNPLASLYIPRKPHSSPTHFANLNQTAGNVQISYKSYLNQISSLCKEAHLR 60
Query: 61 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 120
EAV+LVADMELENITIGPDVYGELLQGCVYERAL LGQQIHGRILKNGEYIAKNEYIETK
Sbjct: 61 EAVNLVADMELENITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 180
LVIFYSKCDE EIANRLF KL VQNEF+WAAIMGLKSRIGFNEEAL+ FCEMHENGL LD
Sbjct: 121 LVIFYSKCDESEIANRLFGKLLVQNEFAWAAIMGLKSRIGFNEEALMGFCEMHENGLLLD 180
Query: 181 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFVIPIALKASGALQWIGFGK+VQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD
Sbjct: 181 NFVIPIALKASGALQWIGFGKSVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 300
KIPEKNIVAWNSMIVNFTQNGLNAEAIETFY+MRVEGVVPTQVTLSSFLSASANLSVI+E
Sbjct: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYEMRVEGVVPTQVTLSSFLSASANLSVIDE 300
Query: 301 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 360
GKQGHALAVLSG+ELTNILGSSLINFYSKVGLVEDAE VFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAEQVFSEMLEKDMVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 420
NGLVD+ALDLCH+MQSENLRFDSVT ASI+AAAADS+NL+LGKEGHSFCVRNNLESD+AV
Sbjct: 361 NGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSKNLKLGKEGHSFCVRNNLESDIAV 420
Query: 421 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASS+VDMYAKCEKLECAR+VFD TVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDMYAKCEKLECARQVFDTTVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDEAFL 540
PPNVISWNSVILGLLNKGEV++AKDMFLEMQSLGVCPNLITWTTLI GL QNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDEAKDMFLEMQSLGVCPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYA 600
TFQ ME+AGIKPNSLSISSLLSACTTMASLPHGRAIHCY+ RH+L VSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACTTMASLPHGRAIHCYIIRHDLLVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 660
KCGSINQAK VFDMI+KKELPIYNAMISGYALHGQAVEALSLFRRLK++CIKPDEITFTS
Sbjct: 601 KCGSINQAKTVFDMIMKKELPIYNAMISGYALHGQAVEALSLFRRLKEDCIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 720
ILSACSHAGLVTEG+ELFIDMVSNHKIVAQAEHYGCL+SILSRCHN+DEALRLILGMPFE
Sbjct: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLISILSRCHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDA IFGSLLAACREHPD ELKERLF+ LLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDASIFGSLLAACREHPDLELKERLFEHLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVEMQSTRCISVIS 840
LMKERGLRKTPGHSLIQIGNETHVFFAGD SHS+TKEIYMMLALLRVEMQSTRCI VIS
Sbjct: 781 VLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSRTKEIYMMLALLRVEMQSTRCIPVIS 840
BLAST of CcUC06G120260 vs. NCBI nr
Match:
XP_011656577.1 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucumis sativus] >XP_011656582.1 pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucumis sativus] >KGN65393.1 hypothetical protein Csa_019708 [Cucumis sativus])
HSP 1 Score: 1522.7 bits (3941), Expect = 0.0e+00
Identity = 756/840 (90.00%), Postives = 801/840 (95.36%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPRKPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEGHLR 60
MA+LPFP+PTNP+ LY+PRKPH SPTHFA+ +Q A NVQISYKSYLN ISSLCK+GHL
Sbjct: 1 MAALPFPLPTNPIYSLYTPRKPHYSPTHFASFSQIASNVQISYKSYLNHISSLCKQGHLL 60
Query: 61 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 120
EA+DLV D+ELE+ITIGPDVYGELLQGCVYERAL LGQQIHGRILKNGE IAKNEYIETK
Sbjct: 61 EALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETK 120
Query: 121 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 180
LVIFYSKCDE EIANRLF KL+VQNEFSWAAIMGLKSR+GFN+EAL+ F EMHE GL LD
Sbjct: 121 LVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLD 180
Query: 181 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFVIPIA KASGAL+WIGFGK+V YVVKMGLGGCIYVA+SLLDMYGKCGLC +AKKVFD
Sbjct: 181 NFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 300
KI EKNIVAWNSMIVNFTQNGLNAEA+ETFY+MRVEGV PTQVTLSSFLSASANLSVI+E
Sbjct: 241 KILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDE 300
Query: 301 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 360
GKQGHALAVLSG+ELTNILGSSLINFYSKVGLVEDAE+VFSEMLEKDTVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 420
NGLVD+ALDLCH+MQSENLRFDSVT ASI+AAAADSRNL+LGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASS++DMYAKCEKLECARRVFDAT KRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDEAFL 540
PPNVISWNSVILGLLNKG+V++AKD F+EMQSLG+CPNLITWTTLI GL QNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYA 600
TFQ ME+AGIKPNSLSISSLLSAC+TMASLPHGRAIHCY+TRHELSVSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 660
KCGSINQAKRVFDMILKKELP+YNAMISGYALHGQAVEALSLFRRLK+ECIKPDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 720
ILSAC HAGLV EG+ELFIDMVSNHKIVAQAEHYGCLVSILSR HN+DEALR+ILGMPFE
Sbjct: 661 ILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLLAACREHPDFELKERLF+RLLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVEMQSTRCISVIS 840
LMKER L K PGHSLIQIGN+THVFFAGD SHS+TKEIYMMLALLRVEMQ TRCISVIS
Sbjct: 781 GLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMMLALLRVEMQFTRCISVIS 840
BLAST of CcUC06G120260 vs. NCBI nr
Match:
XP_023531196.1 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1514.6 bits (3920), Expect = 0.0e+00
Identity = 753/840 (89.64%), Postives = 797/840 (94.88%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPRKPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEGHLR 60
MA+LPF PT PLA LYS RK HNSPTH A LN++AGN QISYKSYLN+ISSLCKEG LR
Sbjct: 1 MAALPFVTPTYPLASLYSTRKLHNSPTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
Query: 61 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 120
AVDLV+++EL+ IT+GPDVYGELLQGCVYERAL LGQQIHGRILKNGE+IAKNEYIETK
Sbjct: 61 AAVDLVSNLELQGITVGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
Query: 121 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 180
LVIFYSKCDE EIANRLFRKLRVQNEFSWAAIMGLK RIGFNEEAL+CFC+MHENGLFLD
Sbjct: 121 LVIFYSKCDESEIANRLFRKLRVQNEFSWAAIMGLKCRIGFNEEALLCFCDMHENGLFLD 180
Query: 181 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFVIPIALKASG+LQWIGFGKA+ GY VKMGLGGCI+VASSLLDMYGKCG+CGDA+KVFD
Sbjct: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMGLGGCIFVASSLLDMYGKCGVCGDARKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 300
KIPEKNIVAWNSMIVNFT NGL EAIETFY MRVEGV PTQVTLS+FLSASANLS+INE
Sbjct: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAIETFYDMRVEGVEPTQVTLSTFLSASANLSLINE 300
Query: 301 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 360
GKQGHALAVLSG+ELTNILGSSLINFYSK+GLVEDAE+VFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAELVFSEMLEKDVVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LC +MQSENLRFDSVT ASI+AAAADSRNL+LGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASS+VD YAKC KLECARRVF+ T+KRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDTYAKCGKLECARRVFELTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDEAFL 540
PPN+ISWNSVILGLLNKGEV+KAKDMFLEMQSLGVCPNL+TWTTLISGL+QNGLGDEAFL
Sbjct: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLSQNGLGDEAFL 540
Query: 541 TFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYA 600
TFQ M++AGIKPNSLSIS LLSACTTMASL HGRAIH Y+TR ELS+STPVLCSLVNMYA
Sbjct: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 660
KCGSINQAKR+FDMILKKELPIYNAMISGYALHGQAVEALSLFRRLK+ECIKPDEITFTS
Sbjct: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 720
ILSACSHAGLVTEG+ELFIDMVSNHKIVAQAEHYGCLVSILSRCHN+DEALRLIL MPFE
Sbjct: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLLAACREHPD ELKERL +RLLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDAFIFGSLLAACREHPDVELKERLSERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVEMQSTRCISVIS 840
DLMKERGLRKTPGHSLIQIGN+THVFFAGD SHSKTKEIY MLALL +EMQ TRCI VIS
Sbjct: 781 DLMKERGLRKTPGHSLIQIGNKTHVFFAGDKSHSKTKEIYKMLALLGIEMQVTRCIPVIS 840
BLAST of CcUC06G120260 vs. NCBI nr
Match:
XP_022933760.1 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita moschata] >XP_022933761.1 pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1512.7 bits (3915), Expect = 0.0e+00
Identity = 753/840 (89.64%), Postives = 792/840 (94.29%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPRKPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEGHLR 60
MASLPF PT PLA LYS RK NSPTH A LN++AGN QISYKSYLN+ISSLCKEG LR
Sbjct: 1 MASLPFVTPTYPLATLYSTRKLQNSPTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
Query: 61 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 120
AVDLV++ EL+ ITIGPDVYGELLQGCVYERAL LGQQIHGRILKNGE+IAKNEYIETK
Sbjct: 61 AAVDLVSNFELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
Query: 121 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 180
LVIFYSKCDE EIANRLFRKLRVQNEFSWAAIMGLK RIGFNEEAL+C CEMHENGLFLD
Sbjct: 121 LVIFYSKCDESEIANRLFRKLRVQNEFSWAAIMGLKCRIGFNEEALLCCCEMHENGLFLD 180
Query: 181 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFVIPIALKA+G+LQWIGFGKA+ GY VKM LGGCI+VASSLLDMYGKCG+CGDAKKVFD
Sbjct: 181 NFVIPIALKAAGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 300
KIPEKNIVAWNSMIVNFT NGL EA+ETFY MRVEGV PTQVTLSSFLSASANLS+INE
Sbjct: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
Query: 301 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 360
GKQGHALAVLSG+ELTNILGSSLINFYSK+GLVEDAE+VFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAELVFSEMLEKDVVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LC +MQSENLRFDSVT ASI+AAAADSRNL+LGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASS+VD YAKC KLECARRVFD +KRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDTYAKCGKLECARRVFDLAIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDEAFL 540
PPN+ISWNSVILGLLNKGEV+KAKDMFLEMQSLGVCPNL+TWTTLISGL QNGLGDEAFL
Sbjct: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
Query: 541 TFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYA 600
TFQLM++AGIKPNSLSIS LLSACT MASL HGRAIH Y+TR ELS+STPVLCSLVNMYA
Sbjct: 541 TFQLMQEAGIKPNSLSISPLLSACTAMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 660
KCGSINQAKR+FDMILKKELPIYNAMISGYALHGQAVEALSLFRRLK+ECIKPDEITFTS
Sbjct: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 720
I+SACSHAGLVTEG+ELFIDMVSNHKIVAQAEHYGCLVSILSRCHN+DEALRL+L MPFE
Sbjct: 661 IISACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLVLAMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLLAACREHPD ELKERLF+RLLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDAFIFGSLLAACREHPDIELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVEMQSTRCISVIS 840
DLMKERGLRKTPGHSLIQIGNETHVFFAGD SHSKTKEIY MLALLR+EMQ TRCI V S
Sbjct: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVTS 840
BLAST of CcUC06G120260 vs. NCBI nr
Match:
KAG7021821.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1512.3 bits (3914), Expect = 0.0e+00
Identity = 755/840 (89.88%), Postives = 793/840 (94.40%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPRKPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEGHLR 60
MA+LPF PT PLA LYS RK NS TH A LN++AGN QISYKSYLN+ISSLCKEG LR
Sbjct: 1 MAALPFVTPTYPLATLYSTRKLQNSLTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
Query: 61 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 120
AVDLV+++EL+ ITIGPDVYGELLQGCVYERAL LGQQIHGRILKNGE+IAKNEYIETK
Sbjct: 61 AAVDLVSNLELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
Query: 121 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 180
LVIFYSKCDE EIANRLFRKLRVQN+FSWAAIMGLK RIGFNEEAL+CFCEMHENGLFLD
Sbjct: 121 LVIFYSKCDESEIANRLFRKLRVQNQFSWAAIMGLKCRIGFNEEALLCFCEMHENGLFLD 180
Query: 181 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFVIPIALKASG+LQWIGFGKA+ GY VKM LGGCI+VASSLLDMYGKCG+CGDAKKVFD
Sbjct: 181 NFVIPIALKASGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 300
KIPEKNIVAWNSMIVNFT NGL EA+ETFY MRVEGV PTQVTLSSFLSASANLS+INE
Sbjct: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
Query: 301 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 360
GKQGHALAVLSG+ELTNILGSSLINFYSK+GLVEDAE VFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAEPVFSEMLEKDVVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LC +MQSENLRFDSVT ASI+AAAADSRNL+LGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASS+VD YAKC KLECARRVFD T+KRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDTYAKCGKLECARRVFDLTIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDEAFL 540
PPN+ISWNSVILGLLNKGEV+KAKDMFLEMQSLGVCPNL+TWTTLISGL QNGLGDEAFL
Sbjct: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
Query: 541 TFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYA 600
TFQ M++AGIKPNSLSIS LLSACTTMASL HGRAIH Y+TR ELS+STPVLCSLVNMYA
Sbjct: 541 TFQSMQEAGIKPNSLSISPLLSACTTMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 660
KCGSINQAKR+FDMILKKELPIYNAMISGYALHGQAVEALSLFRRLK+ECIKPDEITFTS
Sbjct: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 720
ILSACSHAGLVTEG+ELFIDMVSNHKIVAQAEHYGCLVSILSRCHN+DEALRLIL MPFE
Sbjct: 661 ILSACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLILAMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLLAACREHPD ELKERLF+RLLKLEPDNSGNYVALSNAYAATGMWDE SKVR
Sbjct: 721 PDAFIFGSLLAACREHPDVELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEVSKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVEMQSTRCISVIS 840
DLMKERGLRKTPGHSLIQIGNETHVFFAGD SHSKTKEIY MLALLR+EMQ TRCI VIS
Sbjct: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVIS 840
BLAST of CcUC06G120260 vs. ExPASy Swiss-Prot
Match:
Q9FM64 (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR21 PE=2 SV=1)
HSP 1 Score: 917.9 bits (2371), Expect = 8.2e-266
Identity = 458/836 (54.78%), Postives = 612/836 (73.21%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPR---KPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEG 60
MASLPF N + F S + K H+ H S SY +++SSLCK G
Sbjct: 1 MASLPFNTIPNKVPFSVSSKPSSKHHDEQAH-----------SPSSTSYFHRVSSLCKNG 60
Query: 61 HLREAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYI 120
++EA+ LV +M+ N+ IGP++YGE+LQGCVYER L G+QIH RILKNG++ A+NEYI
Sbjct: 61 EIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYI 120
Query: 121 ETKLVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGL 180
ETKLVIFY+KCD EIA LF KLRV+N FSWAAI+G+K RIG E AL+ F EM EN +
Sbjct: 121 ETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEI 180
Query: 181 FLDNFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKK 240
F DNFV+P KA GAL+W FG+ V GYVVK GL C++VASSL DMYGKCG+ DA K
Sbjct: 181 FPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASK 240
Query: 241 VFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSV 300
VFD+IP++N VAWN+++V + QNG N EAI F MR +GV PT+VT+S+ LSASAN+
Sbjct: 241 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 300
Query: 301 INEGKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSG 360
+ EGKQ HA+A+++GMEL NILG+SL+NFY KVGL+E AE+VF M EKD VTWNL++SG
Sbjct: 301 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 360
Query: 361 YVHNGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESD 420
YV GLV+ A+ +C LM+ E L++D VT A++++AAA + NL+LGKE +C+R++ ESD
Sbjct: 361 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 420
Query: 421 VAVASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQL 480
+ +AS+++DMYAKC + A++VFD+TV++DLI+WNTLLAAYAE G SGE L+LFY MQL
Sbjct: 421 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 480
Query: 481 EGLPPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDE 540
EG+PPNVI+WN +IL LL G+V++AKDMFL+MQS G+ PNLI+WTT+++G+ QNG +E
Sbjct: 481 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 540
Query: 541 AFLTFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRH-ELSVSTPVLCSLV 600
A L + M+++G++PN+ SI+ LSAC +ASL GR IH Y+ R+ + S + SLV
Sbjct: 541 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 600
Query: 601 NMYAKCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEI 660
+MYAKCG IN+A++VF L ELP+ NAMIS YAL+G EA++L+R L+ +KPD I
Sbjct: 601 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 660
Query: 661 TFTSILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILG 720
T T++LSAC+HAG + + IE+F D+VS + EHYG +V +L+ ++ALRLI
Sbjct: 661 TITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 720
Query: 721 MPFEPDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEA 780
MPF+PDA + SL+A+C + EL + L ++LL+ EP+NSGNYV +SNAYA G WDE
Sbjct: 721 MPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEV 780
Query: 781 SKVRDLMKERGLRKTPGHSLIQIGNE--THVFFAGDNSHSKTKEIYMMLALLRVEM 831
K+R++MK +GL+K PG S IQI E HVF A D +H++ EI MMLALL +M
Sbjct: 781 VKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
BLAST of CcUC06G120260 vs. ExPASy Swiss-Prot
Match:
Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 426.4 bits (1095), Expect = 7.5e-118
Identity = 260/803 (32.38%), Postives = 425/803 (52.93%), Query Frame = 0
Query: 54 CKEGHLREAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAK 113
C +G L EA + D+ N + + + +L+ C RA+ G+Q+H RI K +
Sbjct: 59 CFDGVLTEAFQRL-DVSENNSPV--EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSF-E 118
Query: 114 NEYIETKLVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMH 173
+++ KLV Y KC + A ++F ++ + F+W ++G G AL + M
Sbjct: 119 LDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR 178
Query: 174 ENGLFLDNFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCG 233
G+ L P LKA L+ I G + +VK+G ++ ++L+ MY K
Sbjct: 179 VEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLS 238
Query: 234 DAKKVFDKIPEK-NIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSAS 293
A+++FD EK + V WNS++ +++ +G + E +E F +M + G P T+ S L+A
Sbjct: 239 AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 298
Query: 294 ANLSVINEGKQGHALAVLSGMELTNI-LGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTW 353
S GK+ HA + S + + + ++LI Y++ G + AE + +M D VTW
Sbjct: 299 DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW 358
Query: 354 NLLVSGYVHNGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVR 413
N L+ GYV N + +AL+ M + + D V+ SI+AA+ NL G E H++ ++
Sbjct: 359 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 418
Query: 414 NNLESDVAVASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKL 473
+ +S++ V ++++DMY+KC R F +DLI W T++A YA+ E L+L
Sbjct: 419 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALEL 478
Query: 474 F-----YQMQLEGLPPNVISWNSVIL----------------GLLNKGEVNKAKDMFLEM 533
F +M+++ + I S +L GLL+ N+ D++ +
Sbjct: 479 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKC 538
Query: 534 QSLGVC---------PNLITWTTLISGLTQNGLGDEAFLTFQLMEKAGIKPNSLSISSLL 593
+++G ++++WT++IS NG EA F+ M + G+ +S+++ +L
Sbjct: 539 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 598
Query: 594 SACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELP 653
SA ++++L GR IHCY+ R + + ++V+MYA CG + AK VFD I +K L
Sbjct: 599 SAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 658
Query: 654 IYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTSILSACSHAGLVTEGIELFIDM 713
Y +MI+ Y +HG A+ LF +++ E + PD I+F ++L ACSHAGL+ EG M
Sbjct: 659 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 718
Query: 714 VSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFEPDAFIFGSLLAACREHPDFEL 773
+++ EHY CLV +L R + V EA + M EP A ++ +LLAACR H + E+
Sbjct: 719 EHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEI 778
Query: 774 KERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVRDLMKERGLRKTPGHSLIQIGN 825
E QRLL+LEP N GN V +SN +A G W++ KVR MK G+ K PG S I++
Sbjct: 779 GEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDG 838
BLAST of CcUC06G120260 vs. ExPASy Swiss-Prot
Match:
Q9SS83 (Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E88 PE=2 SV=1)
HSP 1 Score: 422.9 bits (1086), Expect = 8.3e-117
Identity = 272/883 (30.80%), Postives = 430/883 (48.70%), Query Frame = 0
Query: 42 SYKSYLNQISSLCKEGH-LREAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQI 101
++ S L+ SS+ K G LR V L + N + +L C E + G+QI
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPN----KFTFSIVLSTCARETNVEFGRQI 186
Query: 102 HGRILKNGEYIAKNEYIETKLVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIG 161
H ++K G + +N Y LV Y+KCD A R+F + N W + + G
Sbjct: 187 HCSMIKMG--LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 246
Query: 162 FNEEALVCFCEMHENGLFLDN--FVIPI-------------------------------- 221
EEA++ F M + G D+ FV I
Sbjct: 247 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 306
Query: 222 --------------------------------ALKASGALQWIGFGKAVQGYVVKMGLGG 281
L A G + + G V +K+GL
Sbjct: 307 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 366
Query: 282 CIYVASSLLDMYGKCGLCGDAKKVFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMR 341
IYV SSL+ MY KC A KVF+ + EKN V WN+MI + NG + + +E F M+
Sbjct: 367 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 426
Query: 342 VEGVVPTQVTLSSFLSASANLSVINEGKQGHALAVLSGMELTNILGSSLINFYSKVGLVE 401
G T +S LS A + G Q H++ + + +G++L++ Y+K G +E
Sbjct: 427 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 486
Query: 402 DAEIVFSEMLEKDTVTWNLLVSGYVHNGLVDQALDLCHLMQSENLRFDSVTTASILAAAA 461
DA +F M ++D VTWN ++ YV + +A DL M + D AS L A
Sbjct: 487 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 546
Query: 462 DSRNLRLGKEGHSFCVRNNLESDVAVASSMVDMYAKCEKLECARRVFDATVKRDLIMWNT 521
L GK+ H V+ L+ D+ SS++DMY+KC ++ AR+VF + + ++ N
Sbjct: 547 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 606
Query: 522 LLAAYAEQGQSGETLKLFYQMQLEGLPPNVISWNSVI----------LGLLNKGEVNK-- 581
L+A Y+ Q E + LF +M G+ P+ I++ +++ LG G++ K
Sbjct: 607 LIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 666
Query: 582 --AKDMFLEMQSLGVCPN-------------------LITWTTLISGLTQNGLGDEAFLT 641
++ +L + LG+ N ++ WT ++SG +QNG +EA
Sbjct: 667 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 726
Query: 642 FQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYAK 701
++ M G+ P+ + ++L C+ ++SL GRAIH + + +L++MYAK
Sbjct: 727 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 786
Query: 702 CGSINQAKRVFD-MILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 761
CG + + +VFD M + + +N++I+GYA +G A +AL +F ++Q I PDEITF
Sbjct: 787 CGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 846
Query: 762 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 821
+L+ACSHAG V++G ++F M+ + I A+ +H C+V +L R + EA I +
Sbjct: 847 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK 906
Query: 822 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 824
PDA ++ SLL ACR H D E ++L++LEP NS YV LSN YA+ G W++A+ +R
Sbjct: 907 PDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALR 966
BLAST of CcUC06G120260 vs. ExPASy Swiss-Prot
Match:
Q9FXH1 (Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX=3702 GN=DYW7 PE=2 SV=1)
HSP 1 Score: 419.9 bits (1078), Expect = 7.0e-116
Identity = 257/824 (31.19%), Postives = 418/824 (50.73%), Query Frame = 0
Query: 8 VPTNPLAFL--YSPRKPHNSPTHFANLNQTAGNVQISYKSYLN-----QISSLCKEGHLR 67
VP+ P FL +P K NSP + N+ + K N Q LC+ G L
Sbjct: 6 VPSFPKTFLNYQTPAKVENSPE--LHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLL 65
Query: 68 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 127
EA + + + + Y +LL+ C+ ++ LG+ +H R G + + ++ETK
Sbjct: 66 EAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---GLFTEPDVFVETK 125
Query: 128 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 187
L+ Y+KC A ++F +R +N F+W+A++G SR E F M ++G+ D
Sbjct: 126 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 185
Query: 188 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 247
+F+ P L+ + GK + V+K+G+ C+ V++S+L +Y KCG A K F
Sbjct: 186 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 245
Query: 248 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 307
++ E++++AWNS+++ + QNG + EA+E +M EG+ P VT + + L
Sbjct: 246 RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL----- 305
Query: 308 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 367
GK A+ ++ ME I D TW ++SG +H
Sbjct: 306 GKCDAAMDLMQKMETFGITA--------------------------DVFTWTAMISGLIH 365
Query: 368 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 427
NG+ QALD+ M + ++VT S ++A + + + G E HS V+ DV V
Sbjct: 366 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 425
Query: 428 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 487
+S+VDMY+KC KLE AR+VFD+ +D+ WN+++ Y + G G+ +LF +MQ L
Sbjct: 426 GNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 485
Query: 488 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLG-VCPNLITWTTLISGLTQNGLGDEAF 547
PN+I+WN++I G + G+ +A D+F M+ G V N TW +I+G QNG DEA
Sbjct: 486 RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 545
Query: 548 LTFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMY 607
F+ M+ + PNS++I SLL AC + R IH V R L V +L + Y
Sbjct: 546 ELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTY 605
Query: 608 AKCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFT 667
AK G I ++ +F + K++ +N++I GY LHG AL+LF ++K + I P+ T +
Sbjct: 606 AKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLS 665
Query: 668 SILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPF 727
SI+ A G V EG ++F + +++ I+ EH +V + R + ++EAL+ I M
Sbjct: 666 SIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNI 725
Query: 728 EPDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKV 787
+ + I+ S L CR H D ++ + L LEP+N+ +S YA + +
Sbjct: 726 QSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEG 785
Query: 788 RDLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMML 824
++ L+K G S I++ N H F GD S T +Y ++
Sbjct: 786 NKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLV 793
BLAST of CcUC06G120260 vs. ExPASy Swiss-Prot
Match:
Q9STE1 (Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E36 PE=3 SV=1)
HSP 1 Score: 416.4 bits (1069), Expect = 7.7e-115
Identity = 243/782 (31.07%), Postives = 420/782 (53.71%), Query Frame = 0
Query: 84 LLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETKLVIFYSKCDEPEIANRLFRKLRV 143
LLQ C L G+Q+H ++ N I+ + Y + +++ Y+ C ++F +L +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNS--ISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 100
Query: 144 QNEF--SWAAIMGLKSRIGFNEEALVCFCEMHENGLFLDNFVIPIALKASGALQWIGFGK 203
+ W +I+ R G +AL + +M G+ D P +KA AL+
Sbjct: 101 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 160
Query: 204 AVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFDKIPEKNIVAWNSMIVNFTQNG 263
+ V +G+ +VASSL+ Y + G K+FD++ +K+ V WN M+ + + G
Sbjct: 161 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 220
Query: 264 LNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINEGKQGHALAVLSGMELTNILGS 323
I+ F MR++ + P VT LS A+ +I+ G Q H L V+SG++ + +
Sbjct: 221 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 280
Query: 324 SLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVHNGLVDQALDLCHLMQSENLRF 383
SL++ YSK G +DA +F M DTVTWN ++SGYV +GL++++L + M S +
Sbjct: 281 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 340
Query: 384 DSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAVASSMVDMYAKCEKLECARRVF 443
D++T +S+L + + NL K+ H + +R+++ D+ + S+++D Y KC + A+ +F
Sbjct: 341 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 400
Query: 444 DATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGLPPNVISWNSV--ILGLL---- 503
D++++ +++ Y G ++L++F + + PN I+ S+ ++G+L
Sbjct: 401 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 460
Query: 504 ----------NKGEVNKAK------DMFLEMQSLGVC---------PNLITWTTLISGLT 563
KG N+ DM+ + + + ++++W ++I+
Sbjct: 461 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 520
Query: 564 QNGLGDEAFLTFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTP 623
Q+ A F+ M +GI + +SIS+ LSAC + S G+AIH ++ +H L+
Sbjct: 521 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 580
Query: 624 VLCSLVNMYAKCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQEC 683
+L++MYAKCG++ A VF + +K + +N++I+ HG+ ++L LF + ++
Sbjct: 581 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 640
Query: 684 -IKPDEITFTSILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDE 743
I+PD+ITF I+S+C H G V EG+ F M ++ I Q EHY C+V + R + E
Sbjct: 641 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 700
Query: 744 ALRLILGMPFEPDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAA 803
A + MPF PDA ++G+LL ACR H + EL E +L+ L+P NSG YV +SNA+A
Sbjct: 701 AYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHAN 760
Query: 804 TGMWDEASKVRDLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVE 832
W+ +KVR LMKER ++K PG+S I+I TH+F +GD +H ++ IY +L L E
Sbjct: 761 AREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGE 820
BLAST of CcUC06G120260 vs. ExPASy TrEMBL
Match:
A0A0A0LUC4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G407170 PE=4 SV=1)
HSP 1 Score: 1522.7 bits (3941), Expect = 0.0e+00
Identity = 756/840 (90.00%), Postives = 801/840 (95.36%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPRKPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEGHLR 60
MA+LPFP+PTNP+ LY+PRKPH SPTHFA+ +Q A NVQISYKSYLN ISSLCK+GHL
Sbjct: 1 MAALPFPLPTNPIYSLYTPRKPHYSPTHFASFSQIASNVQISYKSYLNHISSLCKQGHLL 60
Query: 61 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 120
EA+DLV D+ELE+ITIGPDVYGELLQGCVYERAL LGQQIHGRILKNGE IAKNEYIETK
Sbjct: 61 EALDLVTDLELEDITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGESIAKNEYIETK 120
Query: 121 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 180
LVIFYSKCDE EIANRLF KL+VQNEFSWAAIMGLKSR+GFN+EAL+ F EMHE GL LD
Sbjct: 121 LVIFYSKCDESEIANRLFGKLQVQNEFSWAAIMGLKSRMGFNQEALMGFREMHEYGLLLD 180
Query: 181 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFVIPIA KASGAL+WIGFGK+V YVVKMGLGGCIYVA+SLLDMYGKCGLC +AKKVFD
Sbjct: 181 NFVIPIAFKASGALRWIGFGKSVHAYVVKMGLGGCIYVATSLLDMYGKCGLCEEAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 300
KI EKNIVAWNSMIVNFTQNGLNAEA+ETFY+MRVEGV PTQVTLSSFLSASANLSVI+E
Sbjct: 241 KILEKNIVAWNSMIVNFTQNGLNAEAVETFYEMRVEGVAPTQVTLSSFLSASANLSVIDE 300
Query: 301 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 360
GKQGHALAVLSG+ELTNILGSSLINFYSKVGLVEDAE+VFSEMLEKDTVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVEDAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 420
NGLVD+ALDLCH+MQSENLRFDSVT ASI+AAAADSRNL+LGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALDLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASS++DMYAKCEKLECARRVFDAT KRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCEKLECARRVFDATAKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDEAFL 540
PPNVISWNSVILGLLNKG+V++AKD F+EMQSLG+CPNLITWTTLI GL QNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGKVDQAKDTFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYA 600
TFQ ME+AGIKPNSLSISSLLSAC+TMASLPHGRAIHCY+TRHELSVSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRHELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 660
KCGSINQAKRVFDMILKKELP+YNAMISGYALHGQAVEALSLFRRLK+ECIKPDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 720
ILSAC HAGLV EG+ELFIDMVSNHKIVAQAEHYGCLVSILSR HN+DEALR+ILGMPFE
Sbjct: 661 ILSACGHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRIILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLLAACREHPDFELKERLF+RLLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDAFIFGSLLAACREHPDFELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVEMQSTRCISVIS 840
LMKER L K PGHSLIQIGN+THVFFAGD SHS+TKEIYMMLALLRVEMQ TRCISVIS
Sbjct: 781 GLMKERSLSKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMMLALLRVEMQFTRCISVIS 840
BLAST of CcUC06G120260 vs. ExPASy TrEMBL
Match:
A0A6J1EZY3 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441078 PE=4 SV=1)
HSP 1 Score: 1512.7 bits (3915), Expect = 0.0e+00
Identity = 753/840 (89.64%), Postives = 792/840 (94.29%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPRKPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEGHLR 60
MASLPF PT PLA LYS RK NSPTH A LN++AGN QISYKSYLN+ISSLCKEG LR
Sbjct: 1 MASLPFVTPTYPLATLYSTRKLQNSPTHAAKLNESAGNFQISYKSYLNRISSLCKEGDLR 60
Query: 61 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 120
AVDLV++ EL+ ITIGPDVYGELLQGCVYERAL LGQQIHGRILKNGE+IAKNEYIETK
Sbjct: 61 AAVDLVSNFELQGITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEFIAKNEYIETK 120
Query: 121 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 180
LVIFYSKCDE EIANRLFRKLRVQNEFSWAAIMGLK RIGFNEEAL+C CEMHENGLFLD
Sbjct: 121 LVIFYSKCDESEIANRLFRKLRVQNEFSWAAIMGLKCRIGFNEEALLCCCEMHENGLFLD 180
Query: 181 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFVIPIALKA+G+LQWIGFGKA+ GY VKM LGGCI+VASSLLDMYGKCG+CGDAKKVFD
Sbjct: 181 NFVIPIALKAAGSLQWIGFGKAIHGYAVKMDLGGCIFVASSLLDMYGKCGVCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 300
KIPEKNIVAWNSMIVNFT NGL EA+ETFY MRVEGV PTQVTLSSFLSASANLS+INE
Sbjct: 241 KIPEKNIVAWNSMIVNFTHNGLYEEAVETFYDMRVEGVEPTQVTLSSFLSASANLSLINE 300
Query: 301 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 360
GKQGHALAVLSG+ELTNILGSSLINFYSK+GLVEDAE+VFSEMLEKD VTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKIGLVEDAELVFSEMLEKDVVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LC +MQSENLRFDSVT ASI+AAAADSRNL+LGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCRVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASS+VD YAKC KLECARRVFD +KRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIVDTYAKCGKLECARRVFDLAIKRDLIMWNTLLAAYAEQGWSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDEAFL 540
PPN+ISWNSVILGLLNKGEV+KAKDMFLEMQSLGVCPNL+TWTTLISGL QNGLGDEAFL
Sbjct: 481 PPNLISWNSVILGLLNKGEVSKAKDMFLEMQSLGVCPNLVTWTTLISGLAQNGLGDEAFL 540
Query: 541 TFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYA 600
TFQLM++AGIKPNSLSIS LLSACT MASL HGRAIH Y+TR ELS+STPVLCSLVNMYA
Sbjct: 541 TFQLMQEAGIKPNSLSISPLLSACTAMASLRHGRAIHGYITRRELSLSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 660
KCGSINQAKR+FDMILKKELPIYNAMISGYALHGQAVEALSLFRRLK+ECIKPDEITFTS
Sbjct: 601 KCGSINQAKRIFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 720
I+SACSHAGLVTEG+ELFIDMVSNHKIVAQAEHYGCLVSILSRCHN+DEALRL+L MPFE
Sbjct: 661 IISACSHAGLVTEGLELFIDMVSNHKIVAQAEHYGCLVSILSRCHNLDEALRLVLAMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLLAACREHPD ELKERLF+RLLKLEPDNSGNYVALSNAYAATGMWDEASKVR
Sbjct: 721 PDAFIFGSLLAACREHPDIELKERLFERLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVEMQSTRCISVIS 840
DLMKERGLRKTPGHSLIQIGNETHVFFAGD SHSKTKEIY MLALLR+EMQ TRCI V S
Sbjct: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDKSHSKTKEIYKMLALLRIEMQVTRCIHVTS 840
BLAST of CcUC06G120260 vs. ExPASy TrEMBL
Match:
A0A5D3BG60 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold222G00190 PE=4 SV=1)
HSP 1 Score: 1510.4 bits (3909), Expect = 0.0e+00
Identity = 755/840 (89.88%), Postives = 796/840 (94.76%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPRKPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEGHLR 60
MA+LPFP+PTNPL LY+PRK HNS T+FA+LNQ AGNVQISYKSYLNQISSLCK+GHL
Sbjct: 1 MAALPFPLPTNPLPSLYTPRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 120
EA+DLV D+EL +ITIGPDVYGELLQGCVYERAL LGQQIHGRILKNGEYIAKNEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 180
LVIFYSKCDE E ANRLF KL+VQNEFSWAAIMGLKSR+ FNEEAL+ F EMHE GL LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFVIPIALKASGAL+WIGFGK+V GYVVKMGLG CIYVASSLLDMYGKCGLCGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 300
KIPEKNIVAWNSMIV+FTQNG NAEAIETFY+MRVEGV PTQVTLSSFLSASANL VI E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 360
GKQGHALAVLSG+ELTNILGSSLINFYSKVGLVE+AE+VFSEMLEKDTVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LCH+MQSENLRFDSVT ASI+AAAADSRNL+LGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASS++DMYAKCE LECARRVF+A +KRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDEAFL 540
PPNVISWNSVILGLLNKGEV+KAKDMF+EMQSLG+CPNLITWTTLI GL QNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYA 600
TFQ ME+AGIKPNSLSISSLLSAC+TMASLPHGRAIHCY+TR ELSVSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 660
KCGSINQAKRVFDMILKKELP+YNAMISGYALHGQA EALSLFRRLK+E IKPDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEEYIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 720
ILSACSHAGLV EG+ELFIDMVSNHKIVAQAEHYGCLVSILSR HN+DEALRLILGMPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSNHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLL ACREHPDFELKE LF+RLLKLEPDNSGNYVALSNAYAATGMWDEA KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVEMQSTRCISVIS 840
LMKER LRK PGHSLIQIGN+THVFFAGD SHS+TKEIYM LALLR+EMQSTRCISVIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSHSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of CcUC06G120260 vs. ExPASy TrEMBL
Match:
A0A1S3CJ17 (pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501523 PE=4 SV=1)
HSP 1 Score: 1505.3 bits (3896), Expect = 0.0e+00
Identity = 753/840 (89.64%), Postives = 795/840 (94.64%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPRKPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEGHLR 60
MA+LPFP+PTNPL LY+ RK HNS T+FA+LNQ AGNVQISYKSYLNQISSLCK+GHL
Sbjct: 1 MAALPFPLPTNPLPSLYTSRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 120
EA+DLV D+EL +ITIGPDVYGELLQGCVYERAL LGQQIHGRILKNGEYIAKNEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 180
LVIFYSKCDE E ANRLF KL+VQNEFSWAAIMGLKSR+ FNEEAL+ F EMHE GL LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFVIPIALKASGAL+WIGFGK+V GYVVKMGLG CIYVASSLLDMYGKCGLCGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 300
KIPEKNIVAWNSMIV+FTQNG NAEAIETFY+MRVEGV PTQVTLSSFLSASANL VI E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 360
GKQGHALAVLSG+ELTNILGSSLINFYSKVGLVE+AE+VFSEMLEKDTVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LCH+MQSENLRFDSVT ASI+AAAADSRNL+LGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASS++DMYAKCE LECARRVF+A +KRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDEAFL 540
PPNVISWNSVILGLLNKGEV+KAKDMF+EMQSLG+CPNLITWTTLI GL QNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYA 600
TFQ ME+AGIKPNSLSISSLLSAC+TMASLPHGRAIHCY+TR ELSVSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 660
KCGSINQAKRVFDMILKKELP+YNAMISGYALHGQA EALSLFRRLK+ECIKPDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 720
ILSACSHAGLV EG+ELFIDMVS HKIVAQAEHYGCLVSILSR HN+DEALRLILGMPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSFHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLL ACREHPDFELKE LF+RLLKLEPDNSGNYVALSNAYAATGMWDEA KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVEMQSTRCISVIS 840
LMKER LRK PGHSLIQIGN+THVFFAGD S+S+TKEIYM LALLR+EMQSTRCISVIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSNSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of CcUC06G120260 vs. ExPASy TrEMBL
Match:
A0A5A7TJA9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold588G00310 PE=4 SV=1)
HSP 1 Score: 1505.3 bits (3896), Expect = 0.0e+00
Identity = 753/840 (89.64%), Postives = 795/840 (94.64%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPRKPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEGHLR 60
MA+LPFP+PTNPL LY+ RK HNS T+FA+LNQ AGNVQISYKSYLNQISSLCK+GHL
Sbjct: 1 MAALPFPLPTNPLPSLYTSRKLHNSSTYFASLNQIAGNVQISYKSYLNQISSLCKQGHLP 60
Query: 61 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 120
EA+DLV D+EL +ITIGPDVYGELLQGCVYERAL LGQQIHGRILKNGEYIAKNEYIETK
Sbjct: 61 EALDLVTDLELADITIGPDVYGELLQGCVYERALSLGQQIHGRILKNGEYIAKNEYIETK 120
Query: 121 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 180
LVIFYSKCDE E ANRLF KL+VQNEFSWAAIMGLKSR+ FNEEAL+ F EMHE GL LD
Sbjct: 121 LVIFYSKCDESETANRLFDKLQVQNEFSWAAIMGLKSRMRFNEEALMGFREMHEYGLILD 180
Query: 181 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 240
NFVIPIALKASGAL+WIGFGK+V GYVVKMGLG CIYVASSLLDMYGKCGLCGDAKKVFD
Sbjct: 181 NFVIPIALKASGALRWIGFGKSVHGYVVKMGLGVCIYVASSLLDMYGKCGLCGDAKKVFD 240
Query: 241 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 300
KIPEKNIVAWNSMIV+FTQNG NAEAIETFY+MRVEGV PTQVTLSSFLSASANL VI E
Sbjct: 241 KIPEKNIVAWNSMIVSFTQNGRNAEAIETFYEMRVEGVAPTQVTLSSFLSASANLGVIVE 300
Query: 301 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 360
GKQGHALAVLSG+ELTNILGSSLINFYSKVGLVE+AE+VFSEMLEKDTVTWNLLVSGYVH
Sbjct: 301 GKQGHALAVLSGLELTNILGSSLINFYSKVGLVENAELVFSEMLEKDTVTWNLLVSGYVH 360
Query: 361 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 420
NGLVD+AL LCH+MQSENLRFDSVT ASI+AAAADSRNL+LGKEGHSFCVRNNLESDVAV
Sbjct: 361 NGLVDRALGLCHVMQSENLRFDSVTLASIMAAAADSRNLKLGKEGHSFCVRNNLESDVAV 420
Query: 421 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 480
ASS++DMYAKCE LECARRVF+A +KRDLIMWNTLLAAYAEQG SGETLKLFYQMQLEGL
Sbjct: 421 ASSIIDMYAKCENLECARRVFNAMIKRDLIMWNTLLAAYAEQGHSGETLKLFYQMQLEGL 480
Query: 481 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDEAFL 540
PPNVISWNSVILGLLNKGEV+KAKDMF+EMQSLG+CPNLITWTTLI GL QNGLGDEAFL
Sbjct: 481 PPNVISWNSVILGLLNKGEVDKAKDMFMEMQSLGICPNLITWTTLICGLAQNGLGDEAFL 540
Query: 541 TFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYA 600
TFQ ME+AGIKPNSLSISSLLSAC+TMASLPHGRAIHCY+TR ELSVSTPVLCSLVNMYA
Sbjct: 541 TFQSMEEAGIKPNSLSISSLLSACSTMASLPHGRAIHCYITRRELSVSTPVLCSLVNMYA 600
Query: 601 KCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 660
KCGSINQAKRVFDMILKKELP+YNAMISGYALHGQA EALSLFRRLK+ECIKPDEITFTS
Sbjct: 601 KCGSINQAKRVFDMILKKELPVYNAMISGYALHGQAAEALSLFRRLKEECIKPDEITFTS 660
Query: 661 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 720
ILSACSHAGLV EG+ELFIDMVS HKIVAQAEHYGCLVSILSR HN+DEALRLILGMPFE
Sbjct: 661 ILSACSHAGLVREGLELFIDMVSFHKIVAQAEHYGCLVSILSRSHNLDEALRLILGMPFE 720
Query: 721 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 780
PDAFIFGSLL ACREHPDFELKE LF+RLLKLEPDNSGNYVALSNAYAATGMWDEA KVR
Sbjct: 721 PDAFIFGSLLTACREHPDFELKEHLFERLLKLEPDNSGNYVALSNAYAATGMWDEALKVR 780
Query: 781 DLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVEMQSTRCISVIS 840
LMKER LRK PGHSLIQIGN+THVFFAGD S+S+TKEIYM LALLR+EMQSTRCISVIS
Sbjct: 781 GLMKERSLRKIPGHSLIQIGNKTHVFFAGDKSNSRTKEIYMTLALLRMEMQSTRCISVIS 840
BLAST of CcUC06G120260 vs. TAIR 10
Match:
AT5G55740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 917.9 bits (2371), Expect = 5.8e-267
Identity = 458/836 (54.78%), Postives = 612/836 (73.21%), Query Frame = 0
Query: 1 MASLPFPVPTNPLAFLYSPR---KPHNSPTHFANLNQTAGNVQISYKSYLNQISSLCKEG 60
MASLPF N + F S + K H+ H S SY +++SSLCK G
Sbjct: 1 MASLPFNTIPNKVPFSVSSKPSSKHHDEQAH-----------SPSSTSYFHRVSSLCKNG 60
Query: 61 HLREAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYI 120
++EA+ LV +M+ N+ IGP++YGE+LQGCVYER L G+QIH RILKNG++ A+NEYI
Sbjct: 61 EIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYI 120
Query: 121 ETKLVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGL 180
ETKLVIFY+KCD EIA LF KLRV+N FSWAAI+G+K RIG E AL+ F EM EN +
Sbjct: 121 ETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEI 180
Query: 181 FLDNFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKK 240
F DNFV+P KA GAL+W FG+ V GYVVK GL C++VASSL DMYGKCG+ DA K
Sbjct: 181 FPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASK 240
Query: 241 VFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSV 300
VFD+IP++N VAWN+++V + QNG N EAI F MR +GV PT+VT+S+ LSASAN+
Sbjct: 241 VFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGG 300
Query: 301 INEGKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSG 360
+ EGKQ HA+A+++GMEL NILG+SL+NFY KVGL+E AE+VF M EKD VTWNL++SG
Sbjct: 301 VEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISG 360
Query: 361 YVHNGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESD 420
YV GLV+ A+ +C LM+ E L++D VT A++++AAA + NL+LGKE +C+R++ ESD
Sbjct: 361 YVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESD 420
Query: 421 VAVASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQL 480
+ +AS+++DMYAKC + A++VFD+TV++DLI+WNTLLAAYAE G SGE L+LFY MQL
Sbjct: 421 IVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 480
Query: 481 EGLPPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLGVCPNLITWTTLISGLTQNGLGDE 540
EG+PPNVI+WN +IL LL G+V++AKDMFL+MQS G+ PNLI+WTT+++G+ QNG +E
Sbjct: 481 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEE 540
Query: 541 AFLTFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRH-ELSVSTPVLCSLV 600
A L + M+++G++PN+ SI+ LSAC +ASL GR IH Y+ R+ + S + SLV
Sbjct: 541 AILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLV 600
Query: 601 NMYAKCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEI 660
+MYAKCG IN+A++VF L ELP+ NAMIS YAL+G EA++L+R L+ +KPD I
Sbjct: 601 DMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNI 660
Query: 661 TFTSILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILG 720
T T++LSAC+HAG + + IE+F D+VS + EHYG +V +L+ ++ALRLI
Sbjct: 661 TITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEE 720
Query: 721 MPFEPDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEA 780
MPF+PDA + SL+A+C + EL + L ++LL+ EP+NSGNYV +SNAYA G WDE
Sbjct: 721 MPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEV 780
Query: 781 SKVRDLMKERGLRKTPGHSLIQIGNE--THVFFAGDNSHSKTKEIYMMLALLRVEM 831
K+R++MK +GL+K PG S IQI E HVF A D +H++ EI MMLALL +M
Sbjct: 781 VKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDM 825
BLAST of CcUC06G120260 vs. TAIR 10
Match:
AT3G63370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 426.4 bits (1095), Expect = 5.3e-119
Identity = 260/803 (32.38%), Postives = 425/803 (52.93%), Query Frame = 0
Query: 54 CKEGHLREAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAK 113
C +G L EA + D+ N + + + +L+ C RA+ G+Q+H RI K +
Sbjct: 59 CFDGVLTEAFQRL-DVSENNSPV--EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSF-E 118
Query: 114 NEYIETKLVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMH 173
+++ KLV Y KC + A ++F ++ + F+W ++G G AL + M
Sbjct: 119 LDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMR 178
Query: 174 ENGLFLDNFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCG 233
G+ L P LKA L+ I G + +VK+G ++ ++L+ MY K
Sbjct: 179 VEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLS 238
Query: 234 DAKKVFDKIPEK-NIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSAS 293
A+++FD EK + V WNS++ +++ +G + E +E F +M + G P T+ S L+A
Sbjct: 239 AARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTAC 298
Query: 294 ANLSVINEGKQGHALAVLSGMELTNI-LGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTW 353
S GK+ HA + S + + + ++LI Y++ G + AE + +M D VTW
Sbjct: 299 DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTW 358
Query: 354 NLLVSGYVHNGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVR 413
N L+ GYV N + +AL+ M + + D V+ SI+AA+ NL G E H++ ++
Sbjct: 359 NSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 418
Query: 414 NNLESDVAVASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKL 473
+ +S++ V ++++DMY+KC R F +DLI W T++A YA+ E L+L
Sbjct: 419 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALEL 478
Query: 474 F-----YQMQLEGLPPNVISWNSVIL----------------GLLNKGEVNKAKDMFLEM 533
F +M+++ + I S +L GLL+ N+ D++ +
Sbjct: 479 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKC 538
Query: 534 QSLGVC---------PNLITWTTLISGLTQNGLGDEAFLTFQLMEKAGIKPNSLSISSLL 593
+++G ++++WT++IS NG EA F+ M + G+ +S+++ +L
Sbjct: 539 RNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCIL 598
Query: 594 SACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYAKCGSINQAKRVFDMILKKELP 653
SA ++++L GR IHCY+ R + + ++V+MYA CG + AK VFD I +K L
Sbjct: 599 SAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLL 658
Query: 654 IYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTSILSACSHAGLVTEGIELFIDM 713
Y +MI+ Y +HG A+ LF +++ E + PD I+F ++L ACSHAGL+ EG M
Sbjct: 659 QYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIM 718
Query: 714 VSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFEPDAFIFGSLLAACREHPDFEL 773
+++ EHY CLV +L R + V EA + M EP A ++ +LLAACR H + E+
Sbjct: 719 EHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEI 778
Query: 774 KERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVRDLMKERGLRKTPGHSLIQIGN 825
E QRLL+LEP N GN V +SN +A G W++ KVR MK G+ K PG S I++
Sbjct: 779 GEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDG 838
BLAST of CcUC06G120260 vs. TAIR 10
Match:
AT3G09040.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 422.9 bits (1086), Expect = 5.9e-118
Identity = 272/883 (30.80%), Postives = 430/883 (48.70%), Query Frame = 0
Query: 42 SYKSYLNQISSLCKEGH-LREAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQI 101
++ S L+ SS+ K G LR V L + N + +L C E + G+QI
Sbjct: 127 AWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPN----KFTFSIVLSTCARETNVEFGRQI 186
Query: 102 HGRILKNGEYIAKNEYIETKLVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIG 161
H ++K G + +N Y LV Y+KCD A R+F + N W + + G
Sbjct: 187 HCSMIKMG--LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAG 246
Query: 162 FNEEALVCFCEMHENGLFLDN--FVIPI-------------------------------- 221
EEA++ F M + G D+ FV I
Sbjct: 247 LPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMIS 306
Query: 222 --------------------------------ALKASGALQWIGFGKAVQGYVVKMGLGG 281
L A G + + G V +K+GL
Sbjct: 307 GHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLAS 366
Query: 282 CIYVASSLLDMYGKCGLCGDAKKVFDKIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMR 341
IYV SSL+ MY KC A KVF+ + EKN V WN+MI + NG + + +E F M+
Sbjct: 367 NIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 426
Query: 342 VEGVVPTQVTLSSFLSASANLSVINEGKQGHALAVLSGMELTNILGSSLINFYSKVGLVE 401
G T +S LS A + G Q H++ + + +G++L++ Y+K G +E
Sbjct: 427 SSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALE 486
Query: 402 DAEIVFSEMLEKDTVTWNLLVSGYVHNGLVDQALDLCHLMQSENLRFDSVTTASILAAAA 461
DA +F M ++D VTWN ++ YV + +A DL M + D AS L A
Sbjct: 487 DARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 546
Query: 462 DSRNLRLGKEGHSFCVRNNLESDVAVASSMVDMYAKCEKLECARRVFDATVKRDLIMWNT 521
L GK+ H V+ L+ D+ SS++DMY+KC ++ AR+VF + + ++ N
Sbjct: 547 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 606
Query: 522 LLAAYAEQGQSGETLKLFYQMQLEGLPPNVISWNSVI----------LGLLNKGEVNK-- 581
L+A Y+ Q E + LF +M G+ P+ I++ +++ LG G++ K
Sbjct: 607 LIAGYS-QNNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 666
Query: 582 --AKDMFLEMQSLGVCPN-------------------LITWTTLISGLTQNGLGDEAFLT 641
++ +L + LG+ N ++ WT ++SG +QNG +EA
Sbjct: 667 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 726
Query: 642 FQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMYAK 701
++ M G+ P+ + ++L C+ ++SL GRAIH + + +L++MYAK
Sbjct: 727 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAK 786
Query: 702 CGSINQAKRVFD-MILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFTS 761
CG + + +VFD M + + +N++I+GYA +G A +AL +F ++Q I PDEITF
Sbjct: 787 CGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLG 846
Query: 762 ILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPFE 821
+L+ACSHAG V++G ++F M+ + I A+ +H C+V +L R + EA I +
Sbjct: 847 VLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLK 906
Query: 822 PDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKVR 824
PDA ++ SLL ACR H D E ++L++LEP NS YV LSN YA+ G W++A+ +R
Sbjct: 907 PDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALR 966
BLAST of CcUC06G120260 vs. TAIR 10
Match:
AT1G19720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 419.9 bits (1078), Expect = 5.0e-117
Identity = 257/824 (31.19%), Postives = 418/824 (50.73%), Query Frame = 0
Query: 8 VPTNPLAFL--YSPRKPHNSPTHFANLNQTAGNVQISYKSYLN-----QISSLCKEGHLR 67
VP+ P FL +P K NSP + N+ + K N Q LC+ G L
Sbjct: 6 VPSFPKTFLNYQTPAKVENSPE--LHPKSRKKNLSFTKKKEPNIIPDEQFDYLCRNGSLL 65
Query: 68 EAVDLVADMELENITIGPDVYGELLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETK 127
EA + + + + Y +LL+ C+ ++ LG+ +H R G + + ++ETK
Sbjct: 66 EAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---GLFTEPDVFVETK 125
Query: 128 LVIFYSKCDEPEIANRLFRKLRVQNEFSWAAIMGLKSRIGFNEEALVCFCEMHENGLFLD 187
L+ Y+KC A ++F +R +N F+W+A++G SR E F M ++G+ D
Sbjct: 126 LLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPD 185
Query: 188 NFVIPIALKASGALQWIGFGKAVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFD 247
+F+ P L+ + GK + V+K+G+ C+ V++S+L +Y KCG A K F
Sbjct: 186 DFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFR 245
Query: 248 KIPEKNIVAWNSMIVNFTQNGLNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINE 307
++ E++++AWNS+++ + QNG + EA+E +M EG+ P VT + + L
Sbjct: 246 RMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL----- 305
Query: 308 GKQGHALAVLSGMELTNILGSSLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVH 367
GK A+ ++ ME I D TW ++SG +H
Sbjct: 306 GKCDAAMDLMQKMETFGITA--------------------------DVFTWTAMISGLIH 365
Query: 368 NGLVDQALDLCHLMQSENLRFDSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAV 427
NG+ QALD+ M + ++VT S ++A + + + G E HS V+ DV V
Sbjct: 366 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 425
Query: 428 ASSMVDMYAKCEKLECARRVFDATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGL 487
+S+VDMY+KC KLE AR+VFD+ +D+ WN+++ Y + G G+ +LF +MQ L
Sbjct: 426 GNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 485
Query: 488 PPNVISWNSVILGLLNKGEVNKAKDMFLEMQSLG-VCPNLITWTTLISGLTQNGLGDEAF 547
PN+I+WN++I G + G+ +A D+F M+ G V N TW +I+G QNG DEA
Sbjct: 486 RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 545
Query: 548 LTFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTPVLCSLVNMY 607
F+ M+ + PNS++I SLL AC + R IH V R L V +L + Y
Sbjct: 546 ELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTY 605
Query: 608 AKCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQECIKPDEITFT 667
AK G I ++ +F + K++ +N++I GY LHG AL+LF ++K + I P+ T +
Sbjct: 606 AKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLS 665
Query: 668 SILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDEALRLILGMPF 727
SI+ A G V EG ++F + +++ I+ EH +V + R + ++EAL+ I M
Sbjct: 666 SIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNI 725
Query: 728 EPDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAATGMWDEASKV 787
+ + I+ S L CR H D ++ + L LEP+N+ +S YA + +
Sbjct: 726 QSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEG 785
Query: 788 RDLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMML 824
++ L+K G S I++ N H F GD S T +Y ++
Sbjct: 786 NKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLV 793
BLAST of CcUC06G120260 vs. TAIR 10
Match:
AT4G21300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 416.4 bits (1069), Expect = 5.5e-116
Identity = 243/782 (31.07%), Postives = 420/782 (53.71%), Query Frame = 0
Query: 84 LLQGCVYERALLLGQQIHGRILKNGEYIAKNEYIETKLVIFYSKCDEPEIANRLFRKLRV 143
LLQ C L G+Q+H ++ N I+ + Y + +++ Y+ C ++F +L +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNS--ISGDSYTDERILGMYAMCGSFSDCGKMFYRLDL 100
Query: 144 QNEF--SWAAIMGLKSRIGFNEEALVCFCEMHENGLFLDNFVIPIALKASGALQWIGFGK 203
+ W +I+ R G +AL + +M G+ D P +KA AL+
Sbjct: 101 RRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGID 160
Query: 204 AVQGYVVKMGLGGCIYVASSLLDMYGKCGLCGDAKKVFDKIPEKNIVAWNSMIVNFTQNG 263
+ V +G+ +VASSL+ Y + G K+FD++ +K+ V WN M+ + + G
Sbjct: 161 FLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCG 220
Query: 264 LNAEAIETFYKMRVEGVVPTQVTLSSFLSASANLSVINEGKQGHALAVLSGMELTNILGS 323
I+ F MR++ + P VT LS A+ +I+ G Q H L V+SG++ + +
Sbjct: 221 ALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN 280
Query: 324 SLINFYSKVGLVEDAEIVFSEMLEKDTVTWNLLVSGYVHNGLVDQALDLCHLMQSENLRF 383
SL++ YSK G +DA +F M DTVTWN ++SGYV +GL++++L + M S +
Sbjct: 281 SLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLP 340
Query: 384 DSVTTASILAAAADSRNLRLGKEGHSFCVRNNLESDVAVASSMVDMYAKCEKLECARRVF 443
D++T +S+L + + NL K+ H + +R+++ D+ + S+++D Y KC + A+ +F
Sbjct: 341 DAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 400
Query: 444 DATVKRDLIMWNTLLAAYAEQGQSGETLKLFYQMQLEGLPPNVISWNSV--ILGLL---- 503
D++++ +++ Y G ++L++F + + PN I+ S+ ++G+L
Sbjct: 401 SQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALK 460
Query: 504 ----------NKGEVNKAK------DMFLEMQSLGVC---------PNLITWTTLISGLT 563
KG N+ DM+ + + + ++++W ++I+
Sbjct: 461 LGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCA 520
Query: 564 QNGLGDEAFLTFQLMEKAGIKPNSLSISSLLSACTTMASLPHGRAIHCYVTRHELSVSTP 623
Q+ A F+ M +GI + +SIS+ LSAC + S G+AIH ++ +H L+
Sbjct: 521 QSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVY 580
Query: 624 VLCSLVNMYAKCGSINQAKRVFDMILKKELPIYNAMISGYALHGQAVEALSLFRRLKQEC 683
+L++MYAKCG++ A VF + +K + +N++I+ HG+ ++L LF + ++
Sbjct: 581 SESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKS 640
Query: 684 -IKPDEITFTSILSACSHAGLVTEGIELFIDMVSNHKIVAQAEHYGCLVSILSRCHNVDE 743
I+PD+ITF I+S+C H G V EG+ F M ++ I Q EHY C+V + R + E
Sbjct: 641 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 700
Query: 744 ALRLILGMPFEPDAFIFGSLLAACREHPDFELKERLFQRLLKLEPDNSGNYVALSNAYAA 803
A + MPF PDA ++G+LL ACR H + EL E +L+ L+P NSG YV +SNA+A
Sbjct: 701 AYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHAN 760
Query: 804 TGMWDEASKVRDLMKERGLRKTPGHSLIQIGNETHVFFAGDNSHSKTKEIYMMLALLRVE 832
W+ +KVR LMKER ++K PG+S I+I TH+F +GD +H ++ IY +L L E
Sbjct: 761 AREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGE 820
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_038880665.1 | 0.0e+00 | 93.21 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Benincasa ... | [more] |
| XP_011656577.1 | 0.0e+00 | 90.00 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucumis sa... | [more] |
| XP_023531196.1 | 0.0e+00 | 89.64 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita ... | [more] |
| XP_022933760.1 | 0.0e+00 | 89.64 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Cucurbita ... | [more] |
| KAG7021821.1 | 0.0e+00 | 89.88 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q9FM64 | 8.2e-266 | 54.78 | Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidop... | [more] |
| Q9M1V3 | 7.5e-118 | 32.38 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
| Q9SS83 | 8.3e-117 | 30.80 | Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidop... | [more] |
| Q9FXH1 | 7.0e-116 | 31.19 | Pentatricopeptide repeat-containing protein At1g19720 OS=Arabidopsis thaliana OX... | [more] |
| Q9STE1 | 7.7e-115 | 31.07 | Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LUC4 | 0.0e+00 | 90.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G407170 PE=4 SV=1 | [more] |
| A0A6J1EZY3 | 0.0e+00 | 89.64 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucurbit... | [more] |
| A0A5D3BG60 | 0.0e+00 | 89.88 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| A0A1S3CJ17 | 0.0e+00 | 89.64 | pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Cucumis ... | [more] |
| A0A5A7TJA9 | 0.0e+00 | 89.64 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G55740.1 | 5.8e-267 | 54.78 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G63370.1 | 5.3e-119 | 32.38 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G09040.1 | 5.9e-118 | 30.80 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G19720.1 | 5.0e-117 | 31.19 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
| AT4G21300.1 | 5.5e-116 | 31.07 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
