CcUC06G119870 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G119870
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Pentatricopeptide repeat-containing protein
Location	CicolChr06: 19942257 .. 19950169 (+)
RNA-Seq Expression	CcUC06G119870
Synteny	CcUC06G119870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCTTTCTTCCAAAGCAAAACTCTCATCAAAGGGTCGAAAATGTCAATTTCCCCCGATGCTATTACCCTTTCTTAAACTATTTTGAATCCAAACGGAGGGCTATGAGAAAACCTATCGCCCCGCCCTCTCGCGTTTCAGTCTTTACGCCGGCTCCTTCCTCCTCGCCTCTGGGCTTATCCCGCTCAGTGCAGCCCTTGCCATTGGGCGCAACGTAACTTGCCCTCTGCCGGCCGTACGCCACAACCGCCCTCTTTTGCTTCCCGTTGCATACTCTGCTTTCGTCGGCAACTATCAATGAAATCGAACTAAATCGAACCGGATTACAATCCTTGGTAATTATCGATTTTTTGCACTCTGTTTTTGTTAATTATTTATTTCTTTTTCTATTCTTAAGAACAATTACTATGTTTTCAATATTTTCTCTAAATCGTTTGCAGCAGCTGCGACTCGTAAAAGAGAGAAACCATGTTGTTGCTCTGAAATTACCCTATCAATGGCTCTCTTTCGAATCTCTTACGTCCGATCATCATCATTTCGTCTCAAGATCCCCGCGTTATCTACCTTGCAGCTAAGTACAGTCTCTTCTGCCGATTTATTCTATGGCCATCTGCAGAAAAACATCGGTAATGTGGAGAAAACCCTTGCTACTGTAAAGACCAAGTTGGATTCTGGATGTGTCAACCAAGTATTACATAAATGTTCCTTCGAACTATCTCAAATGGGTCTTAGATTTTTTATATGGGCTGGTCGACAGCCTAATTATAGGCATAGTTCTTTTATGTACAGTAGAGCTTGTGAAATGATTGGAATTCATGGAAGGCCAGGTTTGCTTTTTAATGTTATTGAAGATTATAGAAGGGAGGGTTGCCTTGTTGATATTAGGATTTTTAAGATTATGTTAAACTTGTGTAAAGAAGCTAAGCTTGCCAAAGAGGCTTTGTCCATTTTAGGGAAAATGCCCGAATTTCATTTGCGTGCTGACACTACAATGTATAATCTGGTTATAAGGTTATTTACTGAGAAGGGTGAGATGGATATGGCGATGGAGTTGATGAAAGAGATGGATTCAGTTGATATACATCCTAACATGATTACTTATATTTCTTTGCTCAAAGGATTCTGTGATGTGGGTCGTTGGGAGGATGCTTATGGGGTATTTGAGGCTATGAAGGAAAAGGGATGTGAACCCAATACAGTGGTTTACTCCGTGCTACTTAATGCTGCCAGTCGGCATGGGACTATGGAAAAGCTAATGGAAGTGTTGGAGGAGATGGAAAAACACGGGGGAACACGAGGTCCAAATACTGTCACATACACTTCCATAATCCAGCGTCTATGTGAACTAGGCCAGCCTCAGGAAGCATTGAAGATATTGGACAGAATGGAAGAGTATGGTTGTGCTCCAAATCGTGTTACAGTTAGCTCTTTAATCAAGGAATTTTGTAAAAATGGTCATGTGGAGGAGGCATATAAGTTGATTGATAGAGTTGTTGCAAGAGGTGGTGCTTCGTATGGTGATTGCTATAGCTCACTTGTGGTATCTTTGGTTAAGATGAAAAAGATTGCAGAAGCAGAGGAGCTATTTAGAAACATGTTAGCCAATGGGGTGAAGCCAGATGGTGTGGCTTGTACTCTTGTGATCAAGGAATTGTGCTTAGAGGAGCGAGTGCTAGATGGTTTTAACTTGTGCAACGAAGTCGATAGGAATGGATATTTATCTTCCATTGACTCTGATGTTTATTCTCTTCTTTTAGTTGGACTTTGTGAGCATGACCACTCTGTGGATGCTGCAAAACTTGCAAGGTTGATGCTTAAAAAAGGGATTCGTTTAAAGCCTTACTATGCTGAAAGTATCATCAAACACCTAAAGAAATTTGGAGATCAAGAGTTAGTTATGAATTTGGGTGGAATAAGAAATGACAAGCAAAACTAACCAAGAACTTGATATGGGATTGGAGGTGTTAATTTTCAGGATGGTCTTAAACAAAGGTTTTTCGCAAGCTTTAGTTCATTGAAAACAACAAACATGTAGATTAATTTGTGGTATATGGATGTCAAATCCGTAGTAATTGCACGTTCTAAGCTTGGTGGCATACAACTTTAGAGATTGAATCTGTGACCTTTCGTATGAGAGAAAAGAAGATTTTCATGACTTTGTGACCCTTAAATGTTTCACTTTTTGGATGACTGCAAAGGTATGTTAAAAGTCCTTATGAACAACAATTCACATTGTACGAGTTGGAGGTTGAGTTCTGTATCGATAGCCAACCTGAAGTACATCTTACTAGTTTCTCAAATTTCAATATTGTTCAATCTAGTGAAGATGCTTTTAAAATTTTGATGTAGTCAACCTGAAGTACCTCTTATTGCACCAAGCAACTCTGACCCCCTTTCTAGGAACTGGCTGCTATCCAGGGTCCTACTGCAGATCACAGGAGTTCTGGCTGTGTTAATCTGTAAGCTACATAGGCCTCTGACATACACATTTGTGGTTCTGTTGTTGGCTGAAGTGAGAATTGTCTAATTGTCACTTCTAGATTGACATTGGTGATTTTTTTGTCAAAAATATTAATGAGTCAACTGATATTTATAAAATTGATCGAGATTAATTGACTCAGGCATTTGGAATTTGAGAAAGAAAAAGCAACTTTATCCAGGTGTATGAAGAAAAGCGTTTTCTTGAAAATGTTAATGGATCCTGGTTCTTCAATTTAACCCAAGTATTTCTAACACATTCTTTGTTGGCATTGGTTTTTATTGTTTTGTAGTTTAGATGACTACTAGAATGGTTTCATGACTAGCTTGCTTCTTAATTAAGAAGTTCGTTGAATGCTTACCAGTATTTCGATTATAGTTATGGAATGATTGGGGCACTGTATTGAACGAACTTGGTGTGAATTTAATATGGGTAGATATAGAACTACTTATTAGTTTTTTGTTGAATGTCGTAATTTGAGAGTGCATGTTCTTCTCGAAAATGTCAAAAAAATCTTCTGAAGCTTCTCGTTTCTTGAAGAACAAAATTGCATTGTTGGAATCTTCCTCCACCACTATTCTTAATCGCAGGCGAATTGAATCCCTTATCTAATTACGATTAGCCCAGCCAAGTCAATCTTCCAGATTCCTGGTAAGAATTTAAGCATTTCACCCTCCATAATATTTGCCCCTCATTATTGTTTCTGACAATGGCTCCGATTCCCACTTCATTATCTTCAGTTCTGATTGCAGCATCAGTTTTTAATTTGTAGATCTCTTCGTTTGGCGCTTCCATCTGACCACTTCATGTTCGACCCTTCTGTTTCTCTTCCTGAGCACTTTGCAAGTAAATTATATTAGGTAATTGTCGTTCGCCGGTGTAAACACCATGGTGTAATCACCTTTTGGTGTTTGGGGTTTTTCCTTGCTTTCATTTATCAATGGAATTGTTTCCTTTTCTAAAAATTATATTAGGTCTTATGGAGCTCTTTAGGAATTATATTATGTCACACTCCATCCCGAGCCACTCTCCCGTAGTTCGAGACAGAGTGTGAGGACAATAGACACTGACCCTCTTGCGATGTCTACCGTCAAATCTCTACCTTTCCTGGAACTATCATATACAACTTATACAGGTAAAAATAAACTAATTCATTAATCAAATGCATAATTTATTATTACAACTATTTATCAAATCTGTTTACAGGAGACATGACTCTAGTTCTTAATTTAATCAGTCGCCTTAGGCAAAGTGCACATTATCTCTTGGTAGACTTCGACTTCGATCAGCAACGGAAACTCGTCTGCTACCTGGAAAGAAAAACATAAGAAAAGGATGAGCTTTAATGAAGCCTAGTGAGTGATTGATGCAACTAGGGTTTCACTAACCTTTTCGAAAACAATAGCAATAATAATTCCACAATCATGAATCATAAGCAAGTATAATTCAACCATATCGAGCTTTAAATCAAACCTCCCCATGGAGTTATTTCCAGTGTTTGCTTTTCTCGTTGGCCCTCGGCACAGCCAAACTCATCTCGGTATTCAACTGTTCTTAACACCTCTAAGTCCCTATGTTTCTCCTATGTGCATATAGTCTTACAACTTACCATTGGGGCTCAGGAACTACGCCCGTCGACCCTCTAACCATCCCCTCGGGTACTTCTCGCAGGCTCAGGAGCTAGACCCTTCGACCCCCTAACCATCCCACGGGGAAAATCTCCACCACAGGCTCAGAAACTAGGTCTTTCTGACCTGACCATCCTGTGCGGTCACAGACCTAGTCAAAACATGATCGTCATCATCAATGCCTTCTCCTAGTACTTCGGCATTGGAAAATATATATTCAGGTTGCCCATATACCTTCTCCCTATACTTCGGCATTGGGGACCACAATCTGTCCATCGATGACTTCGTAATTTCCTACAGATCGGAATTAGTACACAATATCCAAGAAACTCGATATGCAAATGCTATTTATCCAAATAGCTCGATATATAAATACTATAAATCCAAGTAACTTGATATATATATATATATATTATATATATATATATATATTCTATAAATCCATATTCTATAAATCCAATAAGCTCGATATCTCTATTTCATAAATCCACTAAGCTCGATATATAAATAATAATTGTCCTAGCATGCTTACAACATCATGTTAATAAATTCAATAAATTATTTGAGATCTCACCATAGCACGCATAAGTTCAATAATCCATATTTATCAAATAAAACTCATAGCATGCTATTATTCATTCGTAAATAATATAATTACGTTCTCTCACGAAAAGAAAATCAACCACTCATTGCTAGATTTCTTCTTAACTTATTTCTTCGTTGGCTACCTTCAAGTTTCTTGGAAACCTCACAAGCTTTTCCCCCTTCTCTGTAAGCAAATCTCTCTCCCCCTCAAACTTCTCTTTTCATCTTCCTCTCCCAAGTGCTTCTGGTTGCCTAATTCCTCGCTTCAGGGTTATAGGAGTAGCAATTCTCCTTTAAGGCCGACACTTCACCATTGATTTGTCACAATGCATGCTTTAGGCTTCATGCATCAATACAAATGGTGCCTTGCATGTATGCTTGGCCATGTAGCTCAACACTACCCCTTATGAAGTGTCATTTCCAGAATATAGCAACAATTTATCAAAGATTCGGTCAAAATTGAAGAAAAGTGCATTTTGCCGCTTTTCTCGTAGGTCTCGCTAGAGGAGCAGCGAGATTAGTCTCGCGACGTATCACTGATCACTTTTGTCTCACAAATCTCGCTGGTTTTCTTGGTCTCGCTTATCTTGCTAGTTGCTAGTCTCGCTGATTTTTGCCTAATCTTGCTAGTCTTGCTGACTCTCGCTAGTCTCGCTAACTTCTGCTTGGTCTTGCTAATCTCGCTGGCTTTTGCCTAATCTCGCTAACTTCCTAGATTGGTCGAGACTTTGGCTAACTCCACAAGTCCAATTCTTTTCTTTTTTCGAAAATTTTCCTAACTTTTCAAGCTTGTGACTCGAGGTTACACCTTTTACCCTAGGTTCTTATTTTCCTTATCCTCCTTAAGCAACTAGGTCAACAAGTAGGGTGTCACATATTAGGTACTTTTGAGCTCTTTCGAAAATTTGCTTGGTATGATGGGAAGTGAAATTGGATAATTAAAGTTAAATTAGGGATCATTTAGAAGCATTTTGCAAGTGTGAGGGATTAAACTGTTTATTTTAAAATTTCGAAGACCAAATAGACATAAACTCAAAATCTTTAAAATCCTGAATGGTATTAAACAAGGGATTAAACTGTTTATTTTAAAATTTCGAAGGCCAAAAGTGCATTTTGTTCTATTTTCTTTGTCACGATTCTCATTCTTCTTAAGTAAACATTTGAAAACACCAATAAAAGTAGATAACAAACCAAATAACCAAGTGAGTGTAGTACCTACAAAGTACAACTTTAAAATCCTGAATGGTATTAAACAAGGTGGGACTAAATTTTAAATTGAAAATCTTAAGGGCAATAAGCAAACTAAAAATCGAATATAGAAAACAAATGATTGAATGAAATAGTTTTTCACATCTGTCCAGAAATTATGTTGTCCAGCTTCTTTTGGTAGTCTATCTTAAAATATATTTACACTTACAAATTCTTCAATCAAAGCTATCGTGCATGTTATGTTACTAGTTAAAAGACTCACTTTCTTCTTAAAATTAAAAAAAAAAAAAAAATCTGTTTATATGTAGAATCTAGTTTATGTTAGAAAAAATTGAAGGTTCATAAGGTATCAAATAAGTTATATATTGTCTTTTTGATGGAAAAACCGAAACTATTTATTTTATATATGTTTTAAAATAAGTAATCACTAACATTTACATTGCGGCTTCTTTAGATTGACTTAAGAAAAAAATGTTTTTCAAAAAACTCATTTTTATTTAAATTATTTTGATACAAATTGTTTAAAATACACTCCAAAATCTATTTTGAGTGGCTGCCAAATACTTTAATTTTTTTCAAAATGACTTATTTTTAAAATTAAACACTTGAAAATGTATTCCAAACACACCCTACATGTTCTTAAAGAAATGGTTTAAATACAGAATCTTATGGTATGTTGGAATACCTTTTCAAGTGTTTAATTTAGATATTAAGTCATTTTGAAAGAAAATCAAGTGTTTTACAACCACTCAAAATGGATTTTGAAAGCTAACAGTGTCTTTATTTTAAATAGTTATTATTAAAAGTGTTTAAATGAAAATGAAATTTTGAAAAACATTTATTTTTTAAGTTAATCCAAACAAGCCTTTATTTTTGTTGAAAAGAAAGTGAATATTCATAAAATAAATCCAAATAGTGTTTTGAGTTATAGTTTTGTCATTTAAATAATTACCCTTATATTTATAAAGTAATTGATAAGTCGTTGTATCTTCTTAAATTAAAAAGATAAGAACTGAGACCCTATTTGGTAACCATTTGATTTTTGGTTTTTTATTTTTGAAAATATATTTTTTTAGTTTTAAGTTTTTTTTTTTAAAAAAACAAAAAACCATATATACTTTTGGTTACTATTTTTAAAAACAAAAAACTAATAGTATGTTTGGTAATTTCTTTTGGGGTAATTTGAAGAATAATGCAATTTTTAAAAATAATGACAAAAATAGGATGGTTTAGAAAGTAATGTGAAAAATAGGGTGGATTGGAGATTTATTTGGAAAATGGGGTAGGGAAATTGTGTACTCGGTACACAATTTCCCTTTGGACTGGTCAAAGGACCAGTCACTTGCTGACTTGGCGGCTGATGGGTGGTGAGTCGGGGACCCGGTCCACGAGTTCGGTCCAAACTCTAGGCTGGGTTCACAAGTTCTTTTTTTTTCTTTTTTTAAGGAATTAACTAATTAATTACTCACTTAAATGAAAATTTGTTTCTTGTTTGTGTTTTTATTCAATTATTGTATTAGTTTCATTGATTCTTAATTTCTGAAAATGTAATGGAGAATCATTAATACAGATAAAAGTTAATACAAATCAGAAAATTTAAAATACAAGTCAAGTGCCACATGGTGGTCTCTTCGCGTACGTTGTCCATGACGAGGCACGCGAACTTCAAAATGTTGCTGATGGTGAACTACATCGTCAATATCTTGTTGGGTGACGACAGATGAAAATTCATCGTGTGCATAATATTCCTGTTGATGACTAGAACTGAACGCAATGTCTACATGTGGAGGACTGTCCAGGAGAAGGTGGAACTAGATTGTGTAATATGTAAGGTTCCTGGTCATCGGGTTGCTTTTGAACAGTTTCGTCATGTTGTCTCTGTCGTCTACGACGAATACGTCTTCGATCAGTGTCAACAACATTGAGTCTCCATGTATGTTGAATGATTTTTTCAATATTTACCATGTTTTTCTCACACATTGAGCTCAACTCTGGTAAATCGTGTTGTAATGAG

mRNA sequence

TCCTTTCTTCCAAAGCAAAACTCTCATCAAAGGGTCGAAAATGTCAATTTCCCCCGATGCTATTACCCTTTCTTAAACTATTTTGAATCCAAACGGAGGGCTATGAGAAAACCTATCGCCCCGCCCTCTCGCTCTTTACGCCGGCTCCTTCCTCCTCGCCTCTGGGCTTATCCCGCTCAGTGCAGCCCTTGCCATTGGGCGCAACGTAACTTGCCCTCTGCCGGCCCAGCTGCGACTCGTAAAAGAGAGAAACCATGTTGTTGCTCTGAAATTACCCTATCAATGGCTCTCTTTCGAATCTCTTACGTCCGATCATCATCATTTCGTCTCAAGATCCCCGCGTTATCTACCTTGCAGCTAAGTACAGTCTCTTCTGCCGATTTATTCTATGGCCATCTGCAGAAAAACATCGGTAATGTGGAGAAAACCCTTGCTACTGTAAAGACCAAGTTGGATTCTGGATGTGTCAACCAAGTATTACATAAATGTTCCTTCGAACTATCTCAAATGGGTCTTAGATTTTTTATATGGGCTGGTCGACAGCCTAATTATAGGCATAGTTCTTTTATGTACAGTAGAGCTTGTGAAATGATTGGAATTCATGGAAGGCCAGGTTTGCTTTTTAATGTTATTGAAGATTATAGAAGGGAGGGTTGCCTTGTTGATATTAGGATTTTTAAGATTATGTTAAACTTGTGTAAAGAAGCTAAGCTTGCCAAAGAGGCTTTGTCCATTTTAGGGAAAATGCCCGAATTTCATTTGCGTGCTGACACTACAATGTATAATCTGGTTATAAGGTTATTTACTGAGAAGGGTGAGATGGATATGGCGATGGAGTTGATGAAAGAGATGGATTCAGTTGATATACATCCTAACATGATTACTTATATTTCTTTGCTCAAAGGATTCTGTGATGTGGGTCGTTGGGAGGATGCTTATGGGGTATTTGAGGCTATGAAGGAAAAGGGATGTGAACCCAATACAGTGGTTTACTCCGTGCTACTTAATGCTGCCAGTCGGCATGGGACTATGGAAAAGCTAATGGAAGTGTTGGAGGAGATGGAAAAACACGGGGGAACACGAGGTCCAAATACTGTCACATACACTTCCATAATCCAGCGTCTATGTGAACTAGGCCAGCCTCAGGAAGCATTGAAGATATTGGACAGAATGGAAGAGTATGGTTGTGCTCCAAATCGTGTTACAGTTAGCTCTTTAATCAAGGAATTTTGTAAAAATGGTCATGTGGAGGAGGCATATAAGTTGATTGATAGAGTTGTTGCAAGAGGTGGTGCTTCGTATGGTGATTGCTATAGCTCACTTGTGGTATCTTTGGTTAAGATGAAAAAGATTGCAGAAGCAGAGGAGCTATTTAGAAACATGTTAGCCAATGGGGTGAAGCCAGATGGTGTGGCTTGTACTCTTGTGATCAAGGAATTGTGCTTAGAGGAGCGAGTGCTAGATGGTTTTAACTTGTGCAACGAAGTCGATAGGAATGGATATTTATCTTCCATTGACTCTGATGTTTATTCTCTTCTTTTAGTTGGACTTTGTGAGCATGACCACTCTGTGGATGCTGCAAAACTTGCAAGGTTGATGCTTAAAAAAGGGATTCGTTTAAAGCCTTACTATGCTGAAAGTATCATCAAACACCTAAAGAAATTTGGAGATCAAGAGTTAGTTATGAATTTGGGTGGAATAAGAAATGACAAGCAAAACTAACCAAGAACTTGATATGGGATTGGAGGTGTTAATTTTCAGGATGGTCTTAAACAAAGGTTTTTCGCAAGCTTTAGTTCATTGAAAACAACAAACATGTAGATTAATTTGTGGTATATGGATGTCAAATCCGTAGTAATTGCACGTTCTAAGCTTGGTGGCATACAACTTTAGAGATTGAATCTGTGACCTTTCGTATGAGAGAAAAGAAGATTTTCATGACTTTGTGACCCTTAAATGTTTCACTTTTTGGATGACTGCAAAGGTATGTTAAAAGTCCTTATGAACAACAATTCACATTGTACGAGTTGGAGGTTGAGTTCTGTATCGATAGCCAACCTGAAGTACATCTTACTAGTTTCTCAAATTTCAATATTGTTCAATCTAGTGAAGATGCTTTTAAAATTTTGATGTAGTCAACCTGAAGTACCTCTTATTGCACCAAGCAACTCTGACCCCCTTTCTAGGAACTGGCTGCTATCCAGGGTCCTACTGCAGATCACAGGAGTTCTGGCTGTGTTAATCTGTAAGCTACATAGGCCTCTGACATACACATTTGTGGTTCTGTTGTTGGCTGAAGTGAGAATTGTCTAATTGTCACTTCTAGATTGACATTGGTGATTTTTTTGTCAAAAATATTAATGAGTCAACTGATATTTATAAAATTGATCGAGATTAATTGACTCAGGCATTTGGAATTTGAGAAAGAAAAAGCAACTTTATCCAGGTGTATGAAGAAAAGCGTTTTCTTGAAAATGTTAATGGATCCTGGTTCTTCAATTTAACCCAAGTATTTCTAACACATTCTTTGTTGGCATTGGTTTTTATTGTTTTGTAGTTTAGATGACTACTAGAATGGTTTCATGACTAGCTTGCTTCTTAATTAAGAAGTTCGTTGAATGCTTACCAGTATTTCGATTATAGTTATGGAATGATTGGGGCACTGTATTGAACGAACTTGGTGTGAATTTAATATGGGTAGATATAGAACTACTTATTAGTTTTTTGTTGAATGTCGTAATTTGAGAGTGCATGTTCTTCTCGAAAATGTCAAAAAAATCTTCTGAAGCTTCTCGTTTCTTGAAGAACAAAATTGCATTGTTGGAATCTTCCTCCACCACTATTCTTAATCGCAGGCGAATTGAATCCCTTATCTAATTACGATTAGCCCAGCCAAGTCAATCTTCCAGATTCCTGATCTCTTCGTTTGGCGCTTCCATCTGACCACTTCATGTTCGACCCTTCTGTTTCTCTTCCTGAGCACTTTGCAAGTAAATTATATTAGGTCTTATGGAGCTCTTTAGGAATTATATTATGTCACACTCCATCCCGAGCCACTCTCCCGTAGTTCGAGACAGAGTGTGAGGACAATAGACACTGACCCTCTTGCGATGTCTACCGTCAAATCTCTACCTTTCCTGGAACTATCATATACAACTTATACAGATAAAAGTTAATACAAATCAGAAAATTTAAAATACAAGTCAAGTGCCACATGGTGGTCTCTTCGCGTACGTTGTCCATGACGAGGCACGCGAACTTCAAAATGTTGCTGATGGTGAACTACATCGTCAATATCTTGTTGGGTGACGACAGATGAAAATTCATCGTGTGCATAATATTCCTGTTGATGACTAGAACTGAACGCAATGTCTACATGTGGAGGACTGTCCAGGAGAAGGTGGAACTAGATTGTGTAATATGTAAGGTTCCTGGTCATCGGGTTGCTTTTGAACAGTTTCGTCATGTTGTCTCTGTCGTCTACGACGAATACGTCTTCGATCAGTGTCAACAACATTGAGTCTCCATGTATGTTGAATGATTTTTTCAATATTTACCATGTTTTTCTCACACATTGAGCTCAACTCTGGTAAATCGTGTTGTAATGAG

Coding sequence (CDS)

TCCTTTCTTCCAAAGCAAAACTCTCATCAAAGGGTCGAAAATGTCAATTTCCCCCGATGCTATTACCCTTTCTTAAACTATTTTGAATCCAAACGGAGGGCTATGAGAAAACCTATCGCCCCGCCCTCTCGCTCTTTACGCCGGCTCCTTCCTCCTCGCCTCTGGGCTTATCCCGCTCAGTGCAGCCCTTGCCATTGGGCGCAACGTAACTTGCCCTCTGCCGGCCCAGCTGCGACTCGTAAAAGAGAGAAACCATGTTGTTGCTCTGAAATTACCCTATCAATGGCTCTCTTTCGAATCTCTTACGTCCGATCATCATCATTTCGTCTCAAGATCCCCGCGTTATCTACCTTGCAGCTAAGTACAGTCTCTTCTGCCGATTTATTCTATGGCCATCTGCAGAAAAACATCGGTAATGTGGAGAAAACCCTTGCTACTGTAAAGACCAAGTTGGATTCTGGATGTGTCAACCAAGTATTACATAAATGTTCCTTCGAACTATCTCAAATGGGTCTTAGATTTTTTATATGGGCTGGTCGACAGCCTAATTATAGGCATAGTTCTTTTATGTACAGTAGAGCTTGTGAAATGATTGGAATTCATGGAAGGCCAGGTTTGCTTTTTAATGTTATTGAAGATTATAGAAGGGAGGGTTGCCTTGTTGATATTAGGATTTTTAAGATTATGTTAAACTTGTGTAAAGAAGCTAAGCTTGCCAAAGAGGCTTTGTCCATTTTAGGGAAAATGCCCGAATTTCATTTGCGTGCTGACACTACAATGTATAATCTGGTTATAAGGTTATTTACTGAGAAGGGTGAGATGGATATGGCGATGGAGTTGATGAAAGAGATGGATTCAGTTGATATACATCCTAACATGATTACTTATATTTCTTTGCTCAAAGGATTCTGTGATGTGGGTCGTTGGGAGGATGCTTATGGGGTATTTGAGGCTATGAAGGAAAAGGGATGTGAACCCAATACAGTGGTTTACTCCGTGCTACTTAATGCTGCCAGTCGGCATGGGACTATGGAAAAGCTAATGGAAGTGTTGGAGGAGATGGAAAAACACGGGGGAACACGAGGTCCAAATACTGTCACATACACTTCCATAATCCAGCGTCTATGTGAACTAGGCCAGCCTCAGGAAGCATTGAAGATATTGGACAGAATGGAAGAGTATGGTTGTGCTCCAAATCGTGTTACAGTTAGCTCTTTAATCAAGGAATTTTGTAAAAATGGTCATGTGGAGGAGGCATATAAGTTGATTGATAGAGTTGTTGCAAGAGGTGGTGCTTCGTATGGTGATTGCTATAGCTCACTTGTGGTATCTTTGGTTAAGATGAAAAAGATTGCAGAAGCAGAGGAGCTATTTAGAAACATGTTAGCCAATGGGGTGAAGCCAGATGGTGTGGCTTGTACTCTTGTGATCAAGGAATTGTGCTTAGAGGAGCGAGTGCTAGATGGTTTTAACTTGTGCAACGAAGTCGATAGGAATGGATATTTATCTTCCATTGACTCTGATGTTTATTCTCTTCTTTTAGTTGGACTTTGTGAGCATGACCACTCTGTGGATGCTGCAAAACTTGCAAGGTTGATGCTTAAAAAAGGGATTCGTTTAAAGCCTTACTATGCTGAAAGTATCATCAAACACCTAAAGAAATTTGGAGATCAAGAGTTAGTTATGAATTTGGGTGGAATAAGAAATGACAAGCAAAACTAA

Protein sequence

SFLPKQNSHQRVENVNFPRCYYPFLNYFESKRRAMRKPIAPPSRSLRRLLPPRLWAYPAQCSPCHWAQRNLPSAGPAATRKREKPCCCSEITLSMALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSGCVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDYRREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEMDMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVLLNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEYGCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEAEELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLLVGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIRNDKQN

Homology

[Close]

BLAST of CcUC06G119870 vs. NCBI nr
Match: XP_038874415.1 (pentatricopeptide repeat-containing protein At5g47360 [Benincasa hispida] >XP_038874417.1 pentatricopeptide repeat-containing protein At5g47360 [Benincasa hispida] >XP_038874418.1 pentatricopeptide repeat-containing protein At5g47360 [Benincasa hispida])

HSP 1 Score: 844.7 bits (2181), Expect = 4.6e-241
Identity = 419/474 (88.40%), Postives = 445/474 (93.88%), Query Frame = 0


Query: 95  MALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSG 154
           M LFRISY+RSSSFRLKI  LSTLQLST+SSADLFY HLQKN GNVEKTLA VKTKLDS 
Sbjct: 1   MVLFRISYLRSSSFRLKISTLSTLQLSTISSADLFYDHLQKNNGNVEKTLANVKTKLDSR 60

Query: 155 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDY 214
           CVNQVLHKCSFE+SQMGLRFFIWAGRQPNYRHSSFMYSRACE+IGI G P LLFNVIEDY
Sbjct: 61  CVNQVLHKCSFEISQMGLRFFIWAGRQPNYRHSSFMYSRACELIGIKGSPCLLFNVIEDY 120

Query: 215 RREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEM 274
           +REG LVD+R+FKI+LNLCKEAKLAKEALSILGKMPEFHLRADT+MYNLVI LFTEKGEM
Sbjct: 121 KREGYLVDVRMFKIILNLCKEAKLAKEALSILGKMPEFHLRADTSMYNLVISLFTEKGEM 180

Query: 275 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVL 334
           DMAMELMKEMDSVDIHPNMITYISLLKGFCDV RW+DAYG+F+AMKE GC PNTVVYSVL
Sbjct: 181 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVCRWDDAYGLFKAMKESGCPPNTVVYSVL 240

Query: 335 LNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEY 394
           LNAASR+G ME+LM VLEEMEK GGT  PNTVTYTSIIQ  CELG+P EALKILDRMEE+
Sbjct: 241 LNAASRNGIMERLMAVLEEMEKQGGTCTPNTVTYTSIIQSQCELGRPLEALKILDRMEEF 300

Query: 395 GCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEA 454
           GCAPNRVT+S LIKEFCK+GHVEEAYKLIDR+VARGGASYGDCYSSLVVSLVKMKKIAEA
Sbjct: 301 GCAPNRVTISCLIKEFCKDGHVEEAYKLIDRLVARGGASYGDCYSSLVVSLVKMKKIAEA 360

Query: 455 EELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLL 514
           EELFRNMLANGVKPDG+AC+L+I+ELCLEERVLDGFNLC E+DRNGYLSSIDSD+YSLLL
Sbjct: 361 EELFRNMLANGVKPDGLACSLMIRELCLEERVLDGFNLCYEIDRNGYLSSIDSDIYSLLL 420

Query: 515 VGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIR 569
            GLCEHDHSVDAAKLARLMLKKGIRLKPY AESIIKHLKK  DQELVM+LGGIR
Sbjct: 421 AGLCEHDHSVDAAKLARLMLKKGIRLKPYCAESIIKHLKKSEDQELVMHLGGIR 474

[Close]

BLAST of CcUC06G119870 vs. NCBI nr
Match: KAG7017159.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 839.3 bits (2167), Expect = 1.9e-239
Identity = 411/474 (86.71%), Postives = 443/474 (93.46%), Query Frame = 0


Query: 95  MALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSG 154
           MALFRI Y R SSFR KI  LSTLQLSTVSSADLFY HLQKN GNVEKTLATVKTKLDS 
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60

Query: 155 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDY 214
           CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMY+RACE+IG++  P LLFNVIEDY
Sbjct: 61  CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120

Query: 215 RREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEM 274
           RREGCLVDI +FK++LNLCKE KLAKEALSILGKM EFHLRADTTMYNLVIRLFTEKG+M
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180

Query: 275 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVL 334
           D AMEL+KEMDSVDI PNMITYI++LKGFCDVGR EDAYG+F+ MK+ GC PNTV YSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240

Query: 335 LNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEY 394
           LN ASRHG +EKLME+LEEMEK GGT GPNTVTYTSIIQ LCE+GQP EALKILDRME++
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300

Query: 395 GCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEA 454
           GCAPNRVTVS L+KEFCK+GH+EEAYKLIDRV ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 455 EELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLL 514
           EELFRNMLANGVKPDGVACTL+IKELCLEERV+DGFNLCNEVDRNGYLSSIDSD+YSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 515 VGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIR 569
           VGLCEHDHSVDAAKLARLML+KGIRLKP+YAESIIKH+KKFGDQ LVM+LGGIR
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIR 474

[Close]

BLAST of CcUC06G119870 vs. NCBI nr
Match: KAG6579716.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 838.2 bits (2164), Expect = 4.3e-239
Identity = 410/474 (86.50%), Postives = 443/474 (93.46%), Query Frame = 0


Query: 95  MALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSG 154
           MALFRI Y R SSFR KI  LSTLQLSTVSSADLFY HLQKN GNVEKTLATVKTKLDS 
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVKTKLDSR 60

Query: 155 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDY 214
           CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMY+RACE+IG++  P LLFNVIEDY
Sbjct: 61  CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120

Query: 215 RREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEM 274
           RREGCLVDI +FK++LNLCKE KLAKEALSILGKM EFHLRADTTMYNLVIRLFTEKG+M
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGDM 180

Query: 275 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVL 334
           D AMEL+KEMDSVDI PNMITYI++LKGFCDVGR EDAYG+F+ MK+ GC PNTV YSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240

Query: 335 LNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEY 394
           LN ASRHG +EKLME+LEEMEK GGT GPNTVTYTSIIQ LCE+GQP EALKILDRME++
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300

Query: 395 GCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEA 454
           GCAPNRVTVS L+KEFCK+GH+EEAYKLIDRV ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 455 EELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLL 514
           EELFRNMLANGVKPDGVACTL+IKELCLE+RV+DGFNLCNEVDRNGYLSSIDSD+YSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEDRVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 515 VGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIR 569
           VGLCEHDHSVDAAKLARLML+KGIRLKP+YAESIIKH+KKFGDQ LVM+LGGIR
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIR 474

[Close]

BLAST of CcUC06G119870 vs. NCBI nr
Match: XP_022928928.1 (pentatricopeptide repeat-containing protein At5g47360 [Cucurbita moschata])

HSP 1 Score: 835.9 bits (2158), Expect = 2.1e-238
Identity = 410/474 (86.50%), Postives = 441/474 (93.04%), Query Frame = 0


Query: 95  MALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSG 154
           MALFRI Y R SSFR KI  LSTLQLSTVSSADLFY HLQK  GNVEKTLATVKTKLDS 
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKKNGNVEKTLATVKTKLDSR 60

Query: 155 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDY 214
           CVNQVLHKCS ELSQMGLRFFIWAGRQPNYRHSSFMY+RACE+IG++  P LLFNVIEDY
Sbjct: 61  CVNQVLHKCSLELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120

Query: 215 RREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEM 274
           RREGCLVDI +FK++LNLCKE KLAKEALSILGKM EFHLRADTTMYNLVIRLFTEKGEM
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 275 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVL 334
           D AMEL+KEMDSVDI PNMITYI++LKGFCDVGR EDAYG+F+ MK+ GC PNTV YSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240

Query: 335 LNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEY 394
           LN ASRHG +EKLME+LEEMEK GGT GPNTVTYTSIIQ LCE+GQP EALKILDRME++
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300

Query: 395 GCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEA 454
           GCAPNRVTVS L+KEFCK+GH+EEAYKLIDRV ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 455 EELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLL 514
           EELFRNMLANGVKPDGVACTL+IKELCLEERV+DGFNLCNEVDRNGYLSSIDSD+YSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 515 VGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIR 569
           VGLCEHDHSVDAAKLARLML+KGIRLKP+YAESIIKH+KKFGDQ LVM+LGGIR
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIR 474

[Close]

BLAST of CcUC06G119870 vs. NCBI nr
Match: XP_023551479.1 (pentatricopeptide repeat-containing protein At5g47360 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 835.1 bits (2156), Expect = 3.6e-238
Identity = 408/474 (86.08%), Postives = 442/474 (93.25%), Query Frame = 0


Query: 95  MALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSG 154
           MALFRI Y R SSFR KI  LSTLQLSTVSSADLFY HLQKN GNVEKTL TVKTKLDS 
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLTTVKTKLDSR 60

Query: 155 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDY 214
           CVN+VLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMY+RACE+IG++  P L+FNVIEDY
Sbjct: 61  CVNEVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLVFNVIEDY 120

Query: 215 RREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEM 274
           RREGCLVDI +FK++LNLCKE KLAKEALSILG+M EFHLRADTTMYNLVIRLFTEKGEM
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGEMAEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 275 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVL 334
           D AMEL+KEMDSVDI PNMITYI++LKGFCDVGR EDAYG+F+ MK+ GC PNTV YSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240

Query: 335 LNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEY 394
           LN ASRHG +EKLME+LEEMEK GGT GPNTVTYTSIIQ LCE+GQP EALKILDRME++
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300

Query: 395 GCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEA 454
           GCAPNRVTVS L+KEFCK+GH+EEAYKLIDRV ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 455 EELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLL 514
           EELFRNMLANGVKPDGVACTL+IKELCLEERV+DGFNLCNEVDRNGYLSSIDSD+YSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 515 VGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIR 569
           VGLCEHDHSVDAAKLARLML+KGIRLKP+YAESIIKH+KKFGDQ LVM+LGGIR
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIR 474

[Close]

BLAST of CcUC06G119870 vs. ExPASy Swiss-Prot
Match: Q9LVS3 (Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana OX=3702 GN=At5g47360 PE=2 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 4.2e-120
Identity = 221/466 (47.42%), Postives = 320/466 (68.67%), Query Frame = 0


Query: 100 ISYVRSSSFRLKIPALSTLQ-LSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSGCVNQ 159
           IS + S S R +   +S L+ L+TVS+A+  YG LQ    N+EK LA+   +LDS C+N+
Sbjct: 6   ISRLVSPSLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINE 65

Query: 160 VLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDYRREG 219
           VL +C     Q GLRFFIWAG   ++RHS++MY++AC+++ I  +P L+  VIE YR+E 
Sbjct: 66  VLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEE 125

Query: 220 CLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEMDMAM 279
           C V+++  +I+L LC +A LA EAL +L K PEF++ ADT  YNLVIRLF +KG++++A 
Sbjct: 126 CFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIAD 185

Query: 280 ELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVLLNAA 339
            L+KEMD V ++P++ITY S++ G+C+ G+ +DA+ + + M +  C  N+V YS +L   
Sbjct: 186 MLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGV 245

Query: 340 SRHGTMEKLMEVLEEMEKH--GGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEYGC 399
            + G ME+ +E+L EMEK   GG   PN VTYT +IQ  CE  + +EAL +LDRM   GC
Sbjct: 246 CKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGC 305

Query: 400 APNRVTVSSLIKEFCKNGH-VEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEAE 459
            PNRVT   LI+   +N   V+   KLID++V  GG S  +C+SS  VSL++MK+  EAE
Sbjct: 306 MPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAE 365

Query: 460 ELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLLV 519
           ++FR ML  GV+PDG+AC+ V +ELCL ER LD F L  E+++    S+IDSD++++LL+
Sbjct: 366 KIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLL 425

Query: 520 GLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELV 562
           GLC+  +S +AAKLA+ ML K +RLK  + E II+ LKK GD++L+
Sbjct: 426 GLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLM 471

[Close]

BLAST of CcUC06G119870 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 6.8e-46
Identity = 111/403 (27.54%), Postives = 208/403 (51.61%), Query Frame = 0


Query: 137 IGNVEKTLATVKTKLDSGCVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACE 196
           +  +E  L     +L  G + +VL++C  +   +G RFF+WA +QP Y HS  +Y    +
Sbjct: 97  VPKLELALNESGVELRPGLIERVLNRCG-DAGNLGYRFFVWAAKQPRYCHSIEVYKSMVK 156

Query: 197 MIGIHGRPGLLFNVIEDYRREG-CLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLR 256
           ++    + G ++ +IE+ R+E   L++  +F +++     A + K+A+ +L +MP+F   
Sbjct: 157 ILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFE 216

Query: 257 ADTTMYNLVIRLFTEKGEMDMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGV 316
            D  ++  ++    + G +  A +L ++M  +    N+  + SLL G+C VG+  +A  V
Sbjct: 217 PDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYV 276

Query: 317 FEAMKEKGCEPNTVVYSVLLNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRL 376
              M E G EP+ V Y+ LL+  +  G M    ++L +M + G    PN   YT +IQ L
Sbjct: 277 LVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFE--PNANCYTVLIQAL 336

Query: 377 CELGQPQEALKILDRMEEYGCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYG 436
           C++ + +EA+K+   ME Y C  + VT ++L+  FCK G +++ Y ++D ++ +G     
Sbjct: 337 CKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSE 396

Query: 437 DCYSSLVVSLVKMKKIAEAEELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNE 496
             Y  ++V+  K +   E  EL   M      PD     +VI+  C    V +   L NE
Sbjct: 397 LTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNE 456

Query: 497 VDRNGYLSSIDSDVYSLLLVGLCEHDHSVDAAKLARLMLKKGI 539
           ++ NG    +D+  + +++ GL      ++A+   + M+ +G+
Sbjct: 457 MEENGLSPGVDT--FVIMINGLASQGCLLEASDHFKEMVTRGL 493

[Close]

BLAST of CcUC06G119870 vs. ExPASy Swiss-Prot
Match: P0C8A0 (Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX=3702 GN=At3g49730 PE=2 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.2e-45
Identity = 115/425 (27.06%), Postives = 215/425 (50.59%), Query Frame = 0


Query: 151 LDSGCVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNV 210
           L  G + +VL +C  +   +G RFF+WA +QP Y HS  +      ++    + G ++ +
Sbjct: 95  LRPGLIIRVLSRCG-DAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGL 154

Query: 211 IEDYRREGC-LVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFT 270
           IE+ R+    L++  +F +++     A + K+A+ +L +MP++ L  D  ++  ++    
Sbjct: 155 IEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALC 214

Query: 271 EKGEMDMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTV 330
           + G +  A ++ ++M      PN+  + SLL G+C  G+  +A  V   MKE G EP+ V
Sbjct: 215 KNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIV 274

Query: 331 VYSVLLNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCEL-GQPQEALKIL 390
           V++ LL+  +  G M    +++ +M K G    PN   YT +IQ LC    +  EA+++ 
Sbjct: 275 VFTNLLSGYAHAGKMADAYDLMNDMRKRGFE--PNVNCYTVLIQALCRTEKRMDEAMRVF 334

Query: 391 DRMEEYGCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKM 450
             ME YGC  + VT ++LI  FCK G +++ Y ++D +  +G       Y  ++V+  K 
Sbjct: 335 VEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 394

Query: 451 KKIAEAEELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSD 510
           ++  E  EL   M   G  PD +   +VI+  C    V +   L NE++ NG    +D+ 
Sbjct: 395 EQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDT- 454

Query: 511 VYSLLLVGLCEHDHSVDAAKLARLMLKKGIRLKPYYA--ESIIKHLKKFGDQELVMNLGG 570
            + +++ G       ++A    + M+ +GI   P Y   +S++ +L +    E+  ++  
Sbjct: 455 -FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWS 513

Query: 571 IRNDK 572
             ++K
Sbjct: 515 CISNK 513

[Close]

BLAST of CcUC06G119870 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.8e-38
Identity = 87/309 (28.16%), Postives = 169/309 (54.69%), Query Frame = 0


Query: 232 LCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEMDMAMELMKEMDSVDIHP 291
           +CK  + A  A+ +L KM E +++ D   Y+++I    + G +D A  L  EM+      
Sbjct: 238 MCKSGQTAL-AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 297

Query: 292 NMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVLLNAASRHGTMEKLMEVL 351
           ++ITY +L+ GFC+ GRW+D   +   M ++   PN V +SVL+++  + G + +  ++L
Sbjct: 298 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 357

Query: 352 EEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEYGCAPNRVTVSSLIKEFC 411
           +EM + G    PNT+TY S+I   C+  + +EA++++D M   GC P+ +T + LI  +C
Sbjct: 358 KEMMQRG--IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 417

Query: 412 KNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEAEELFRNMLANGVKPDGV 471
           K   +++  +L   +  RG  +    Y++LV    +  K+  A++LF+ M++  V+PD V
Sbjct: 418 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 477

Query: 472 ACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLLVGLCEHDHSVDAAKLAR 531
           +  +++  LC    +     +  +++++     +D  +Y +++ G+C      DA  L  
Sbjct: 478 SYKILLDGLCDNGELEKALEIFGKIEKS--KMELDIGIYMIIIHGMCNASKVDDAWDLFC 537

Query: 532 LMLKKGIRL 541
            +  KG++L
Sbjct: 538 SLPLKGVKL 541

[Close]

BLAST of CcUC06G119870 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 6.8e-38
Identity = 84/331 (25.38%), Postives = 179/331 (54.08%), Query Frame = 0


Query: 210 VIEDYRREGCLVDIRIFKIMLN-LCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLF 269
           V++   +  C  D+  + I++   C+++ +   A+ +L +M +     D   YN+++   
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVG-HAMKLLDEMRDRGCTPDVVTYNVLVNGI 285

Query: 270 TEKGEMDMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNT 329
            ++G +D A++ + +M S    PN+IT+  +L+  C  GRW DA  +   M  KG  P+ 
Sbjct: 286 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 345

Query: 330 VVYSVLLNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKIL 389
           V +++L+N   R G + + +++LE+M +HG    PN+++Y  ++   C+  +   A++ L
Sbjct: 346 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQ--PNSLSYNPLLHGFCKEKKMDRAIEYL 405

Query: 390 DRMEEYGCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKM 449
           +RM   GC P+ VT ++++   CK+G VE+A ++++++ ++G +     Y++++  L K 
Sbjct: 406 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 465

Query: 450 KKIAEAEELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSD 509
            K  +A +L   M A  +KPD +  + ++  L  E +V +     +E +R G     ++ 
Sbjct: 466 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP--NAV 525

Query: 510 VYSLLLVGLCEHDHSVDAAKLARLMLKKGIR 540
            ++ +++GLC+   +  A      M+ +G +
Sbjct: 526 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551

[Close]

BLAST of CcUC06G119870 vs. ExPASy TrEMBL
Match: A0A6J1EQI2 (pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita moschata OX=3662 GN=LOC111435690 PE=3 SV=1)

HSP 1 Score: 835.9 bits (2158), Expect = 1.0e-238
Identity = 410/474 (86.50%), Postives = 441/474 (93.04%), Query Frame = 0


Query: 95  MALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSG 154
           MALFRI Y R SSFR KI  LSTLQLSTVSSADLFY HLQK  GNVEKTLATVKTKLDS 
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKKNGNVEKTLATVKTKLDSR 60

Query: 155 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDY 214
           CVNQVLHKCS ELSQMGLRFFIWAGRQPNYRHSSFMY+RACE+IG++  P LLFNVIEDY
Sbjct: 61  CVNQVLHKCSLELSQMGLRFFIWAGRQPNYRHSSFMYTRACELIGLNRSPCLLFNVIEDY 120

Query: 215 RREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEM 274
           RREGCLVDI +FK++LNLCKE KLAKEALSILGKM EFHLRADTTMYNLVIRLFTEKGEM
Sbjct: 121 RREGCLVDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 275 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVL 334
           D AMEL+KEMDSVDI PNMITYI++LKGFCDVGR EDAYG+F+ MK+ GC PNTV YSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKDNGCAPNTVAYSVL 240

Query: 335 LNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEY 394
           LN ASRHG +EKLME+LEEMEK GGT GPNTVTYTSIIQ LCE+GQP EALKILDRME++
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGTCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDF 300

Query: 395 GCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEA 454
           GCAPNRVTVS L+KEFCK+GH+EEAYKLIDRV ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCAPNRVTVSVLVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 455 EELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLL 514
           EELFRNMLANGVKPDGVACTL+IKELCLEERV+DGFNLCNEVDRNGYLSSIDSD+YSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 515 VGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIR 569
           VGLCEHDHSVDAAKLARLML+KGIRLKP+YAESIIKH+KKFGDQ LVM+LGGIR
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGDQNLVMHLGGIR 474

[Close]

BLAST of CcUC06G119870 vs. ExPASy TrEMBL
Match: A0A6J1I125 (pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita maxima OX=3661 GN=LOC111468919 PE=3 SV=1)

HSP 1 Score: 829.3 bits (2141), Expect = 9.6e-237
Identity = 406/474 (85.65%), Postives = 441/474 (93.04%), Query Frame = 0


Query: 95  MALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSG 154
           MALFRI Y R SSFR KI  LSTLQLSTVSSADLFY HLQKN GNVEKTLATV+TKLDS 
Sbjct: 1   MALFRIFYPRPSSFRFKISTLSTLQLSTVSSADLFYDHLQKNNGNVEKTLATVRTKLDSR 60

Query: 155 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDY 214
           CVNQVLHKCSFELS MGLRFFIWAGRQPNYRHSSFMY+RACE+IG++  P LLFNVIEDY
Sbjct: 61  CVNQVLHKCSFELSPMGLRFFIWAGRQPNYRHSSFMYARACELIGLNRSPCLLFNVIEDY 120

Query: 215 RREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEM 274
           RREGCL+DI +FK++LNLCKE KLAKEALSILGKM EFHLRADTTMYNLVIRLFTEKGEM
Sbjct: 121 RREGCLLDIGMFKVILNLCKEGKLAKEALSILGKMAEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 275 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVL 334
           D AMEL+KEMDSVDI PNMITYI++LKGFCDVGR EDAYG+F+ MKE GC PNTV YSVL
Sbjct: 181 DKAMELLKEMDSVDIDPNMITYIAMLKGFCDVGRLEDAYGLFKVMKENGCAPNTVAYSVL 240

Query: 335 LNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEY 394
           LN ASRHG +EKLME+LEEMEK GG  GPNTVTYTSIIQ LCE+GQP EALKILDRME+ 
Sbjct: 241 LNGASRHGDLEKLMELLEEMEKQGGNCGPNTVTYTSIIQSLCEVGQPLEALKILDRMEDS 300

Query: 395 GCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEA 454
           GC+PNRVTVS+L+KEFCK+GH+EEAYKLIDRV ARGGASYGDCYSSLV+SL+KMK+IAEA
Sbjct: 301 GCSPNRVTVSALVKEFCKDGHMEEAYKLIDRVAARGGASYGDCYSSLVISLIKMKRIAEA 360

Query: 455 EELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLL 514
           EELFRNMLANGVKPDGVACTL+IKELCLEERV+DGFNLCNEV+RNGYLSSIDSD+YSLLL
Sbjct: 361 EELFRNMLANGVKPDGVACTLMIKELCLEERVVDGFNLCNEVNRNGYLSSIDSDIYSLLL 420

Query: 515 VGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIR 569
           VGLCEHDHSVDAAKLARLML+KGIRLKP+YAESIIKH+KKFG Q+LVM+LGGIR
Sbjct: 421 VGLCEHDHSVDAAKLARLMLQKGIRLKPHYAESIIKHVKKFGGQDLVMHLGGIR 474

[Close]

BLAST of CcUC06G119870 vs. ExPASy TrEMBL
Match: A0A0A0LI44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123590 PE=4 SV=1)

HSP 1 Score: 806.6 bits (2082), Expect = 6.7e-230
Identity = 400/474 (84.39%), Postives = 435/474 (91.77%), Query Frame = 0


Query: 95  MALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSG 154
           MALFRIS  RSSSF L I  LST  L+T+SS+DLFY HL+K+ GN++KTLAT+KTKLDS 
Sbjct: 1   MALFRISCPRSSSFLLNISTLSTFHLNTLSSSDLFYDHLEKSNGNLDKTLATLKTKLDSR 60

Query: 155 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDY 214
           CVN+VL+KCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACE+IGI+  P LLFNVIEDY
Sbjct: 61  CVNEVLYKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACELIGINVSPCLLFNVIEDY 120

Query: 215 RREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEM 274
           RREGCLVDIR+FKI+LNLCKEAKLAKEALSIL KM EFHLRADTTMYNLVIRLFTEKGEM
Sbjct: 121 RREGCLVDIRMFKIILNLCKEAKLAKEALSILRKMSEFHLRADTTMYNLVIRLFTEKGEM 180

Query: 275 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVL 334
           D AMELMKEMDSVDIHPNMITYIS+LKGFCDVGRWEDAYG+F+ MKE GC PNTVVYSVL
Sbjct: 181 DKAMELMKEMDSVDIHPNMITYISMLKGFCDVGRWEDAYGLFKDMKENGCAPNTVVYSVL 240

Query: 335 LNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEY 394
           +N A R   M++LME+L+EMEK GGT  PNTVTYTSIIQ LCE G P EALK+LDRMEEY
Sbjct: 241 VNGAIRLRIMDRLMEMLKEMEKQGGTCSPNTVTYTSIIQSLCEEGHPLEALKVLDRMEEY 300

Query: 395 GCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEA 454
           G APNRV VS L+KEFCK+GHVEEAYKLIDRVVARGG SYGDCYSSLVV+LVKMKKIAEA
Sbjct: 301 GYAPNRVAVSFLVKEFCKDGHVEEAYKLIDRVVARGGVSYGDCYSSLVVTLVKMKKIAEA 360

Query: 455 EELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLL 514
           E+LFRNMLANGVKPDGVAC+L+I+ELCLEERVLDGFNLC EVDRNGYL SID+D+YSLLL
Sbjct: 361 EKLFRNMLANGVKPDGVACSLMIRELCLEERVLDGFNLCYEVDRNGYLCSIDADIYSLLL 420

Query: 515 VGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIR 569
           VGLCEHDHSVDAAKLARLMLKKGIRLKP+YAESIIKHLKKF D+ELVM+LGGIR
Sbjct: 421 VGLCEHDHSVDAAKLARLMLKKGIRLKPHYAESIIKHLKKFEDRELVMHLGGIR 474

[Close]

BLAST of CcUC06G119870 vs. ExPASy TrEMBL
Match: A0A6J1DNK5 (pentatricopeptide repeat-containing protein At5g47360 OS=Momordica charantia OX=3673 GN=LOC111022875 PE=3 SV=1)

HSP 1 Score: 792.7 bits (2046), Expect = 1.0e-225
Identity = 391/474 (82.49%), Postives = 422/474 (89.03%), Query Frame = 0


Query: 95  MALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSG 154
           MALF I   RS SF LKI  LS L LSTVSSADLFY HLQKN GNVEK LATVKT LDS 
Sbjct: 1   MALFGIFSFRSFSFGLKISKLSALHLSTVSSADLFYDHLQKNNGNVEKILATVKTTLDSR 60

Query: 155 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDY 214
           CVNQVLHKCSFELS MGLRFFIWAGRQPNYRHSSFMYSRACE+IGI   P LL NVIEDY
Sbjct: 61  CVNQVLHKCSFELSLMGLRFFIWAGRQPNYRHSSFMYSRACELIGIDRSPCLLLNVIEDY 120

Query: 215 RREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEM 274
           RREGC+VDIR+FK+MLNLCKEAKLA EAL ILGKMPEFHLRADTT+YNLV+RLF EKGEM
Sbjct: 121 RREGCVVDIRMFKVMLNLCKEAKLANEALLILGKMPEFHLRADTTIYNLVVRLFIEKGEM 180

Query: 275 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVL 334
           D AM+LM+EMDS+DIHPNMITYI++LKGFCDVGR EDAYG+F+AMKE GC PNT+ YS+L
Sbjct: 181 DKAMKLMEEMDSIDIHPNMITYIAMLKGFCDVGRLEDAYGLFKAMKENGCSPNTLAYSIL 240

Query: 335 LNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEY 394
           LN ASR G  EK+ME+LEEMEK GG   PNTVTYTSIIQ LCELGQP EALKILDRME  
Sbjct: 241 LNGASRQGITEKIMELLEEMEKEGGNCSPNTVTYTSIIQSLCELGQPLEALKILDRMENS 300

Query: 395 GCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEA 454
           GCAPNRVTV +LIKEFCK+GH+EE Y+LI RVVARGG SYGDCYSSLVVSL KMKKIA A
Sbjct: 301 GCAPNRVTVRTLIKEFCKDGHMEEVYELIHRVVARGGTSYGDCYSSLVVSLAKMKKIAAA 360

Query: 455 EELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLL 514
           EELFRNMLA+GVKPDGVAC+++IKELCLEERVLDG+NLCNEVDRNGYLSSIDSD+YSLLL
Sbjct: 361 EELFRNMLASGVKPDGVACSVMIKELCLEERVLDGYNLCNEVDRNGYLSSIDSDIYSLLL 420

Query: 515 VGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIR 569
           VGLCEHDH +DA KLARLMLKKGIRLKP+YA+ +IKHL KFGDQELVM LGGIR
Sbjct: 421 VGLCEHDHPMDAEKLARLMLKKGIRLKPHYADHVIKHLNKFGDQELVMQLGGIR 474

[Close]

BLAST of CcUC06G119870 vs. ExPASy TrEMBL
Match: A0A1S3B4L9 (pentatricopeptide repeat-containing protein At5g47360 OS=Cucumis melo OX=3656 GN=LOC103485755 PE=4 SV=1)

HSP 1 Score: 781.9 bits (2018), Expect = 1.8e-222
Identity = 394/474 (83.12%), Postives = 426/474 (89.87%), Query Frame = 0


Query: 95  MALFRISYVRSSSFRLKIPALSTLQLSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSG 154
           MALFRISY RSSS  L I  LST  LST+SS+DLFY HL+KN GNVEKTLATVKTKLDS 
Sbjct: 1   MALFRISYPRSSSILLNISTLSTFHLSTLSSSDLFYDHLEKNNGNVEKTLATVKTKLDSR 60

Query: 155 CVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDY 214
           CVN+VL+KCS ELSQMGLRFFIWAGRQPNYRH+SFMYSRACE+IGI+  P LLFNVIEDY
Sbjct: 61  CVNEVLYKCSSELSQMGLRFFIWAGRQPNYRHTSFMYSRACELIGINVSPCLLFNVIEDY 120

Query: 215 RREGCLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEM 274
           RREGCLVDIRIF+I+LNLCKEAKL KEALSIL KM EFHLRADTT+YNLVIRL TEKGEM
Sbjct: 121 RREGCLVDIRIFQIILNLCKEAKLTKEALSILRKMSEFHLRADTTIYNLVIRLCTEKGEM 180

Query: 275 DMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVL 334
           D AMELMKEMDSVDIHPNMITYIS++KGFCDVGRWEDAYG+F+AMKE G  PNTVVYSVL
Sbjct: 181 DKAMELMKEMDSVDIHPNMITYISMIKGFCDVGRWEDAYGLFKAMKENGYAPNTVVYSVL 240

Query: 335 LNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEY 394
           +N A R   M+KLME+LEEMEK GGT  PNTVTYTSIIQ LCE G   EALK+LDRMEEY
Sbjct: 241 VNGAVRLRIMDKLMEMLEEMEKQGGTCRPNTVTYTSIIQSLCEQGFLLEALKVLDRMEEY 300

Query: 395 GCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEA 454
           G APNRV V  L+KEFCK+GHVEEAYKLIDRVVARGGASYGDC SSLV+SLVKMKKI EA
Sbjct: 301 GHAPNRVAVGYLVKEFCKDGHVEEAYKLIDRVVARGGASYGDCCSSLVISLVKMKKIPEA 360

Query: 455 EELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLL 514
           E+LFRNMLANGVKPDGVAC+L+I+ELCLEERVLDGF+LC EVDRNGYL  ID+DVYSLLL
Sbjct: 361 EKLFRNMLANGVKPDGVACSLMIRELCLEERVLDGFSLCYEVDRNGYLCYIDADVYSLLL 420

Query: 515 VGLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELVMNLGGIR 569
           VGL +HDHSVDAA LARLMLKKGIRLKP+YAESIIKHLKKF DQEL+M+LGGIR
Sbjct: 421 VGLYQHDHSVDAAILARLMLKKGIRLKPHYAESIIKHLKKFEDQELIMHLGGIR 474

[Close]

BLAST of CcUC06G119870 vs. TAIR 10
Match: AT5G47360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 433.3 bits (1113), Expect = 3.0e-121
Identity = 221/466 (47.42%), Postives = 320/466 (68.67%), Query Frame = 0


Query: 100 ISYVRSSSFRLKIPALSTLQ-LSTVSSADLFYGHLQKNIGNVEKTLATVKTKLDSGCVNQ 159
           IS + S S R +   +S L+ L+TVS+A+  YG LQ    N+EK LA+   +LDS C+N+
Sbjct: 6   ISRLVSPSLRSQPSKISALRFLTTVSAAERLYGQLQGCTSNLEKELASANVQLDSSCINE 65

Query: 160 VLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNVIEDYRREG 219
           VL +C     Q GLRFFIWAG   ++RHS++MY++AC+++ I  +P L+  VIE YR+E 
Sbjct: 66  VLRRCDPNQFQSGLRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEE 125

Query: 220 CLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEMDMAM 279
           C V+++  +I+L LC +A LA EAL +L K PEF++ ADT  YNLVIRLF +KG++++A 
Sbjct: 126 CFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIAD 185

Query: 280 ELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVLLNAA 339
            L+KEMD V ++P++ITY S++ G+C+ G+ +DA+ + + M +  C  N+V YS +L   
Sbjct: 186 MLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGV 245

Query: 340 SRHGTMEKLMEVLEEMEKH--GGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEYGC 399
            + G ME+ +E+L EMEK   GG   PN VTYT +IQ  CE  + +EAL +LDRM   GC
Sbjct: 246 CKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGC 305

Query: 400 APNRVTVSSLIKEFCKNGH-VEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEAE 459
            PNRVT   LI+   +N   V+   KLID++V  GG S  +C+SS  VSL++MK+  EAE
Sbjct: 306 MPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAE 365

Query: 460 ELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLLV 519
           ++FR ML  GV+PDG+AC+ V +ELCL ER LD F L  E+++    S+IDSD++++LL+
Sbjct: 366 KIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLL 425

Query: 520 GLCEHDHSVDAAKLARLMLKKGIRLKPYYAESIIKHLKKFGDQELV 562
           GLC+  +S +AAKLA+ ML K +RLK  + E II+ LKK GD++L+
Sbjct: 426 GLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTGDEDLM 471

[Close]

BLAST of CcUC06G119870 vs. TAIR 10
Match: AT5G65820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 4.8e-47
Identity = 111/403 (27.54%), Postives = 208/403 (51.61%), Query Frame = 0


Query: 137 IGNVEKTLATVKTKLDSGCVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACE 196
           +  +E  L     +L  G + +VL++C  +   +G RFF+WA +QP Y HS  +Y    +
Sbjct: 97  VPKLELALNESGVELRPGLIERVLNRCG-DAGNLGYRFFVWAAKQPRYCHSIEVYKSMVK 156

Query: 197 MIGIHGRPGLLFNVIEDYRREG-CLVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLR 256
           ++    + G ++ +IE+ R+E   L++  +F +++     A + K+A+ +L +MP+F   
Sbjct: 157 ILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFE 216

Query: 257 ADTTMYNLVIRLFTEKGEMDMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGV 316
            D  ++  ++    + G +  A +L ++M  +    N+  + SLL G+C VG+  +A  V
Sbjct: 217 PDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYV 276

Query: 317 FEAMKEKGCEPNTVVYSVLLNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRL 376
              M E G EP+ V Y+ LL+  +  G M    ++L +M + G    PN   YT +IQ L
Sbjct: 277 LVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFE--PNANCYTVLIQAL 336

Query: 377 CELGQPQEALKILDRMEEYGCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYG 436
           C++ + +EA+K+   ME Y C  + VT ++L+  FCK G +++ Y ++D ++ +G     
Sbjct: 337 CKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSE 396

Query: 437 DCYSSLVVSLVKMKKIAEAEELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNE 496
             Y  ++V+  K +   E  EL   M      PD     +VI+  C    V +   L NE
Sbjct: 397 LTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNE 456

Query: 497 VDRNGYLSSIDSDVYSLLLVGLCEHDHSVDAAKLARLMLKKGI 539
           ++ NG    +D+  + +++ GL      ++A+   + M+ +G+
Sbjct: 457 MEENGLSPGVDT--FVIMINGLASQGCLLEASDHFKEMVTRGL 493

[Close]

BLAST of CcUC06G119870 vs. TAIR 10
Match: AT3G49730.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 186.0 bits (471), Expect = 8.2e-47
Identity = 115/425 (27.06%), Postives = 215/425 (50.59%), Query Frame = 0


Query: 151 LDSGCVNQVLHKCSFELSQMGLRFFIWAGRQPNYRHSSFMYSRACEMIGIHGRPGLLFNV 210
           L  G + +VL +C  +   +G RFF+WA +QP Y HS  +      ++    + G ++ +
Sbjct: 95  LRPGLIIRVLSRCG-DAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGL 154

Query: 211 IEDYRREGC-LVDIRIFKIMLNLCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFT 270
           IE+ R+    L++  +F +++     A + K+A+ +L +MP++ L  D  ++  ++    
Sbjct: 155 IEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALC 214

Query: 271 EKGEMDMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTV 330
           + G +  A ++ ++M      PN+  + SLL G+C  G+  +A  V   MKE G EP+ V
Sbjct: 215 KNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIV 274

Query: 331 VYSVLLNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCEL-GQPQEALKIL 390
           V++ LL+  +  G M    +++ +M K G    PN   YT +IQ LC    +  EA+++ 
Sbjct: 275 VFTNLLSGYAHAGKMADAYDLMNDMRKRGFE--PNVNCYTVLIQALCRTEKRMDEAMRVF 334

Query: 391 DRMEEYGCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKM 450
             ME YGC  + VT ++LI  FCK G +++ Y ++D +  +G       Y  ++V+  K 
Sbjct: 335 VEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 394

Query: 451 KKIAEAEELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSD 510
           ++  E  EL   M   G  PD +   +VI+  C    V +   L NE++ NG    +D+ 
Sbjct: 395 EQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDT- 454

Query: 511 VYSLLLVGLCEHDHSVDAAKLARLMLKKGIRLKPYYA--ESIIKHLKKFGDQELVMNLGG 570
            + +++ G       ++A    + M+ +GI   P Y   +S++ +L +    E+  ++  
Sbjct: 455 -FVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWS 513

Query: 571 IRNDK 572
             ++K
Sbjct: 515 CISNK 513

[Close]

BLAST of CcUC06G119870 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 162.2 bits (409), Expect = 1.3e-39
Identity = 87/309 (28.16%), Postives = 169/309 (54.69%), Query Frame = 0


Query: 232 LCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLFTEKGEMDMAMELMKEMDSVDIHP 291
           +CK  + A  A+ +L KM E +++ D   Y+++I    + G +D A  L  EM+      
Sbjct: 238 MCKSGQTAL-AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 297

Query: 292 NMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNTVVYSVLLNAASRHGTMEKLMEVL 351
           ++ITY +L+ GFC+ GRW+D   +   M ++   PN V +SVL+++  + G + +  ++L
Sbjct: 298 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 357

Query: 352 EEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKILDRMEEYGCAPNRVTVSSLIKEFC 411
           +EM + G    PNT+TY S+I   C+  + +EA++++D M   GC P+ +T + LI  +C
Sbjct: 358 KEMMQRG--IAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 417

Query: 412 KNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKMKKIAEAEELFRNMLANGVKPDGV 471
           K   +++  +L   +  RG  +    Y++LV    +  K+  A++LF+ M++  V+PD V
Sbjct: 418 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 477

Query: 472 ACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSDVYSLLLVGLCEHDHSVDAAKLAR 531
           +  +++  LC    +     +  +++++     +D  +Y +++ G+C      DA  L  
Sbjct: 478 SYKILLDGLCDNGELEKALEIFGKIEKS--KMELDIGIYMIIIHGMCNASKVDDAWDLFC 537

Query: 532 LMLKKGIRL 541
            +  KG++L
Sbjct: 538 SLPLKGVKL 541

[Close]

BLAST of CcUC06G119870 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 4.8e-39
Identity = 84/331 (25.38%), Postives = 179/331 (54.08%), Query Frame = 0


Query: 210 VIEDYRREGCLVDIRIFKIMLN-LCKEAKLAKEALSILGKMPEFHLRADTTMYNLVIRLF 269
           V++   +  C  D+  + I++   C+++ +   A+ +L +M +     D   YN+++   
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVG-HAMKLLDEMRDRGCTPDVVTYNVLVNGI 285

Query: 270 TEKGEMDMAMELMKEMDSVDIHPNMITYISLLKGFCDVGRWEDAYGVFEAMKEKGCEPNT 329
            ++G +D A++ + +M S    PN+IT+  +L+  C  GRW DA  +   M  KG  P+ 
Sbjct: 286 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSV 345

Query: 330 VVYSVLLNAASRHGTMEKLMEVLEEMEKHGGTRGPNTVTYTSIIQRLCELGQPQEALKIL 389
           V +++L+N   R G + + +++LE+M +HG    PN+++Y  ++   C+  +   A++ L
Sbjct: 346 VTFNILINFLCRKGLLGRAIDILEKMPQHGCQ--PNSLSYNPLLHGFCKEKKMDRAIEYL 405

Query: 390 DRMEEYGCAPNRVTVSSLIKEFCKNGHVEEAYKLIDRVVARGGASYGDCYSSLVVSLVKM 449
           +RM   GC P+ VT ++++   CK+G VE+A ++++++ ++G +     Y++++  L K 
Sbjct: 406 ERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKA 465

Query: 450 KKIAEAEELFRNMLANGVKPDGVACTLVIKELCLEERVLDGFNLCNEVDRNGYLSSIDSD 509
            K  +A +L   M A  +KPD +  + ++  L  E +V +     +E +R G     ++ 
Sbjct: 466 GKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRP--NAV 525

Query: 510 VYSLLLVGLCEHDHSVDAAKLARLMLKKGIR 540
            ++ +++GLC+   +  A      M+ +G +
Sbjct: 526 TFNSIMLGLCKSRQTDRAIDFLVFMINRGCK 551

The following BLAST results are available for this feature:

BLAST of CcUC06G119870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038874415.1	4.6e-241	88.40	pentatricopeptide repeat-containing protein At5g47360 [Benincasa hispida] >XP_03...	[more]
KAG7017159.1	1.9e-239	86.71	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG6579716.1	4.3e-239	86.50	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022928928.1	2.1e-238	86.50	pentatricopeptide repeat-containing protein At5g47360 [Cucurbita moschata]	[more]
XP_023551479.1	3.6e-238	86.08	pentatricopeptide repeat-containing protein At5g47360 [Cucurbita pepo subsp. pep...	[more]

BLAST of CcUC06G119870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVS3	4.2e-120	47.42	Pentatricopeptide repeat-containing protein At5g47360 OS=Arabidopsis thaliana OX...	[more]
Q9FH87	6.8e-46	27.54	Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th...	[more]
P0C8A0	1.2e-45	27.06	Pentatricopeptide repeat-containing protein At3g49730 OS=Arabidopsis thaliana OX...	[more]
Q9LPX2	1.8e-38	28.16	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]
Q3EDF8	6.8e-38	25.38	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]

BLAST of CcUC06G119870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQI2	1.0e-238	86.50	pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita moschata OX=3...	[more]
A0A6J1I125	9.6e-237	85.65	pentatricopeptide repeat-containing protein At5g47360 OS=Cucurbita maxima OX=366...	[more]
A0A0A0LI44	6.7e-230	84.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123590 PE=4 SV=1	[more]
A0A6J1DNK5	1.0e-225	82.49	pentatricopeptide repeat-containing protein At5g47360 OS=Momordica charantia OX=...	[more]
A0A1S3B4L9	1.8e-222	83.12	pentatricopeptide repeat-containing protein At5g47360 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CcUC06G119870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47360.1	3.0e-121	47.42	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G65820.1	4.8e-47	27.54	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G49730.1	8.2e-47	27.06	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12775.1	1.3e-39	28.16	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09900.1	4.8e-39	25.38	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 437..466 e-value: 0.0037 score: 17.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 363..412 e-value: 5.5E-15 score: 55.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 294..328 e-value: 1.4E-9 score: 35.5 coord: 260..292 e-value: 6.7E-5 score: 20.8 coord: 366..399 e-value: 6.8E-9 score: 33.4 coord: 401..430 e-value: 0.0013 score: 16.7 coord: 437..469 e-value: 1.9E-6 score: 25.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 399..433 score: 9.854266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 327..361 score: 9.777537
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 257..291 score: 10.665402
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 292..326 score: 13.668798
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 434..468 score: 9.898111
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 364..398 score: 13.109773
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 506..540 score: 8.801982
IPR033443	Pentacotripeptide-repeat region of PRORP	PFAM	PF17177	PPR_long	coord: 212..356 e-value: 1.6E-17 score: 63.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 436..571 e-value: 9.8E-16 score: 60.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 138..287 e-value: 2.4E-17 score: 65.0 coord: 288..358 e-value: 9.5E-22 score: 79.4 coord: 359..427 e-value: 3.7E-19 score: 71.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 223..433
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 365..463
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 113..564
None	No IPR available	PANTHER	PTHR45613:SF82	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 113..564

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G119870.1	CcUC06G119870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding