CcUC06G119160 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G119160
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr06: 14698919 .. 14699442 (-)
RNA-Seq Expression	CcUC06G119160
Synteny	CcUC06G119160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGACTTCATCATTTACAAATGATACTTCTAAACAAAGTCGTTCTAGTCAAACTCTTCGCTCAATTGCAAGTGAAAATCTTACTCCTAGGGTTAGTAGTCTATAAGATTGTTAGAAAAAAGAAAACCTAAATCAATTTCATTTTTTTGTGACATTTTATTAAAGTAGAAGGATGTGATCCTTAATATTCTAAGGTTGCTTGTAAGTACTTTGGGGTTACGTACATACACATGTGATTCCAAGAGAAATGGTACAACAAATCTAAAAAATCGTTCAAAAAAACGTAAGAAGTATGCAAAAAAGTCTGAAAATTATGTTGAAGAAGAGGGAGATTCTGAAGGTAGTATGATCGCTACGTATTTTACTCGAGAAAATTATAGAATGATGCTTGCTTTTATGGTCATATTAGATGAAATTTTGTTATATTTAAGTTTGTAGAAAGTGAAGGATTACATAAATTTTGTCAAGCACTAAATCTGATGTTTGTAATTTCATCAAGAGTGGCTAGCAAAAGATTGTCTTCA

mRNA sequence

CATGACTTCATCATTTACAAATGATACTTCTAAACAAAGTCGTTCTAGTCAAACTCTTCGCTCAATTGCAAGTGAAAATCTTACTCCTAGGAAGGATGTGATCCTTAATATTCTAAGGTTGCTTGTAAGTACTTTGGGGTTACGTACATACACATGTGATTCCAAGAGAAATGGTACAACAAATCTAAAAAATCGTTCAAAAAAACGTAAGAAGTATGCAAAAAAGTCTGAAAATTATGTTGAAGAAGAGGGAGATTCTGAAGAAAGTGAAGGATTACATAAATTTTGTCAAGCACTAAATCTGATGTTTGTAATTTCATCAAGAGTGGCTAGCAAAAGATTGTCTTCA

Coding sequence (CDS)

ATGACTTCATCATTTACAAATGATACTTCTAAACAAAGTCGTTCTAGTCAAACTCTTCGCTCAATTGCAAGTGAAAATCTTACTCCTAGGAAGGATGTGATCCTTAATATTCTAAGGTTGCTTGTAAGTACTTTGGGGTTACGTACATACACATGTGATTCCAAGAGAAATGGTACAACAAATCTAAAAAATCGTTCAAAAAAACGTAAGAAGTATGCAAAAAAGTCTGAAAATTATGTTGAAGAAGAGGGAGATTCTGAAGAAAGTGAAGGATTACATAAATTTTGTCAAGCACTAAATCTGATGTTTGTAATTTCATCAAGAGTGGCTAGCAAAAGATTGTCTTCA

Protein sequence

MTSSFTNDTSKQSRSSQTLRSIASENLTPRKDVILNILRLLVSTLGLRTYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSEESEGLHKFCQALNLMFVISSRVASKRLSS

Homology

[Close]

BLAST of CcUC06G119160 vs. NCBI nr
Match: KAA0026183.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 40/92 (43.48%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 49  TYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSE--------------------- 108
           +Y CDSKRNGTTNLK   +K K Y    E+ VE EGDSE                     
Sbjct: 84  SYACDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMV 143

Query: 109 ----------ESEGLHKFCQALNLMFVISSRV 110
                     ESEG H+FC+ALN  FVI SRV
Sbjct: 144 ILDELPFKFVESEGFHQFCRALNPKFVIPSRV 175

[Close]

BLAST of CcUC06G119160 vs. NCBI nr
Match: TYK30776.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 40/92 (43.48%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 49  TYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSE--------------------- 108
           +Y CDSKRNGTTNLK   +K K Y    E+ VE EGDSE                     
Sbjct: 84  SYACDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMV 143

Query: 109 ----------ESEGLHKFCQALNLMFVISSRV 110
                     ESEG H+FC+ALN  FVI SRV
Sbjct: 144 ILDELPFKFVESEGFHQFCRALNPKFVIPSRV 175

[Close]

BLAST of CcUC06G119160 vs. NCBI nr
Match: ACX85638.1 (putative transposase [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 40/92 (43.48%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 49  TYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSE--------------------- 108
           +Y CDSKRNGTTNLK   +K K Y    E+ VE EGDSE                     
Sbjct: 56  SYACDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMV 115

Query: 109 ----------ESEGLHKFCQALNLMFVISSRV 110
                     ESEG H+FC+ALN  FVI SRV
Sbjct: 116 ILDELPFKFVESEGFHQFCRALNPKFVIPSRV 147

[Close]

BLAST of CcUC06G119160 vs. NCBI nr
Match: TYK06161.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 40/92 (43.48%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 49  TYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSE--------------------- 108
           +Y CDSKRNGTTNLK   +K K Y    E+ VE EGDSE                     
Sbjct: 56  SYACDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMV 115

Query: 109 ----------ESEGLHKFCQALNLMFVISSRV 110
                     ESEG H+FC+ALN  FVI SRV
Sbjct: 116 ILDELPFKFVESEGFHQFCRALNPKFVIPSRV 147

[Close]

BLAST of CcUC06G119160 vs. NCBI nr
Match: TYK30761.1 (putative transposase [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-05
Identity = 40/92 (43.48%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 49  TYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSE--------------------- 108
           +Y CDSKRNGTTNLK   +K K Y    E+ VE EGDSE                     
Sbjct: 56  SYACDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSSMAASFTQENCRKMLARMV 115

Query: 109 ----------ESEGLHKFCQALNLMFVISSRV 110
                     ESEG H+FC+ALN  FVI SRV
Sbjct: 116 ILDELPFKFVESEGFHQFCRALNPKFVIPSRV 147

[Close]

BLAST of CcUC06G119160 vs. ExPASy TrEMBL
Match: A0A5D3C2L4 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00130 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05
Identity = 40/92 (43.48%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 49  TYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSE--------------------- 108
           +Y CDSKRNGTTNLK   +K K Y    E+ VE EGDSE                     
Sbjct: 56  SYACDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSLMAASFTQENCRKMLARMV 115

Query: 109 ----------ESEGLHKFCQALNLMFVISSRV 110
                     ESEG H+FC+ALN  FVI SRV
Sbjct: 116 ILDELPFKFVESEGFHQFCRALNPKFVIPSRV 147

[Close]

BLAST of CcUC06G119160 vs. ExPASy TrEMBL
Match: A0A5D3E590 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001030 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05
Identity = 40/92 (43.48%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 49  TYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSE--------------------- 108
           +Y CDSKRNGTTNLK   +K K Y    E+ VE EGDSE                     
Sbjct: 56  SYACDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESSSMAASFTQENCRKMLARMV 115

Query: 109 ----------ESEGLHKFCQALNLMFVISSRV 110
                     ESEG H+FC+ALN  FVI SRV
Sbjct: 116 ILDELPFKFVESEGFHQFCRALNPKFVIPSRV 147

[Close]

BLAST of CcUC06G119160 vs. ExPASy TrEMBL
Match: A0A5A7SNJ1 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001460 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05
Identity = 40/92 (43.48%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 49  TYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSE--------------------- 108
           +Y CDSKRNGTTNLK   +K K Y    E+ VE EGDSE                     
Sbjct: 84  SYACDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMV 143

Query: 109 ----------ESEGLHKFCQALNLMFVISSRV 110
                     ESEG H+FC+ALN  FVI SRV
Sbjct: 144 ILDELPFKFVESEGFHQFCRALNPKFVIPSRV 175

[Close]

BLAST of CcUC06G119160 vs. ExPASy TrEMBL
Match: A0A5D3E4G3 (Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343G001240 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05
Identity = 40/92 (43.48%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 49  TYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSE--------------------- 108
           +Y CDSKRNGTTNLK   +K K Y    E+ VE EGDSE                     
Sbjct: 84  SYACDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMV 143

Query: 109 ----------ESEGLHKFCQALNLMFVISSRV 110
                     ESEG H+FC+ALN  FVI SRV
Sbjct: 144 ILDELPFKFVESEGFHQFCRALNPKFVIPSRV 175

[Close]

BLAST of CcUC06G119160 vs. ExPASy TrEMBL
Match: D0UIX2 (Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05
Identity = 40/92 (43.48%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 49  TYTCDSKRNGTTNLKNRSKKRKKYAKKSENYVEEEGDSE--------------------- 108
           +Y CDSKRNGTTNLK   +K K Y    E+ VE EGDSE                     
Sbjct: 56  SYACDSKRNGTTNLKRHLEKCKMYVNPLEDNVEGEGDSESNLMTASFTQENCRKMLARMV 115

Query: 109 ----------ESEGLHKFCQALNLMFVISSRV 110
                     ESEG H+FC+ALN  FVI SRV
Sbjct: 116 ILDELPFKFVESEGFHQFCRALNPKFVIPSRV 147

The following BLAST results are available for this feature:

BLAST of CcUC06G119160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0026183.1	3.3e-05	43.48	putative transposase [Cucumis melo var. makuwa]	[more]
TYK30776.1	3.3e-05	43.48	putative transposase [Cucumis melo var. makuwa]	[more]
ACX85638.1	3.3e-05	43.48	putative transposase [Cucumis melo]	[more]
TYK06161.1	3.3e-05	43.48	putative transposase [Cucumis melo var. makuwa]	[more]
TYK30761.1	3.3e-05	43.48	putative transposase [Cucumis melo var. makuwa]	[more]

BLAST of CcUC06G119160 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G119160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C2L4	1.6e-05	43.48	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287...	[more]
A0A5D3E590	1.6e-05	43.48	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343...	[more]
A0A5A7SNJ1	1.6e-05	43.48	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G...	[more]
A0A5D3E4G3	1.6e-05	43.48	Putative transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold343...	[more]
D0UIX2	1.6e-05	43.48	Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1	[more]

BLAST of CcUC06G119160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G119160.1	CcUC06G119160.1	mRNA