CcUC06G118710 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G118710
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	E3 ubiquitin-protein ligase ATL42-like
Location	CicolChr06: 13752984 .. 13756848 (-)
RNA-Seq Expression	CcUC06G118710
Synteny	CcUC06G118710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACAAGCACCTCCTTCACCAAAAGCTGATTCTGGTATTCCACAAAACTTCACCATTGCTATTGGAGTCCTCTCCATTATGTTCTCCCTGGCCTTCATTCTTGTTCTTTATGCAAAATTCTGTCACCAGACTTCCCATCTTCGTGGCGAACCGCAAGCTCATCTTGGGCTTGGACTTCTCAGATCAGACTCGAGATTTTTCTGGGGTTGATCAAATGGTGATTGATGCACTTCCTTTCTTTAAATTCTCATCACTCCAACGATCAAGAGAAGGGCTGGAATGTGCTGTTTGCTTAACCAAATTTGAGGATATTGAAGTTCTTCGGTTGCTTCCGAAGTGCAAGCATGCATTTCACATTGGCTGTATTGATCATTGGCTCGAAAAGCAATCAAACTGTCCGCTTTGTCGGTGTAGGATCAGCATCGAGGACGTTGCATTCTTTACCTATTCCAACAGTATGAGACTAATGAGGAACAACAGCATTTGTGCAGAGAGAGAGATCATCATAACTCTTCAAGGTTCAACACTGGAACCACCTTCAGAAAAATAGGAAAGGGTAACAAGGAGAAAGAAGTCTTGATCGAAAATGAAGCCGGTGAATGCAAAAGTGAGGAGCGGGTGCTCTTTCACAAGCATAAACACAAGATTCTTGTATCTGACTTTGTTTTCATGAACAGATGGAGCAACTTGAGTTCTTCTGACCTTATGTTCTTGAACACAGAAATGCTTGGAGCCATGTCCAGCAATAGATTCTCTTCTTTGGATTCAGAAAGTGTTTGCCGATCGGCAACAAGAGAATCTGAGGGAAAAAGGACTACACAAATTAAAGAAGAGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGTTTAGTTTCAATCTCAGGTATTCCCTCAATATGCGATTTTAATCCAAGTACATCAAGGACAACAAATCTTAATGAAAGAAGATCTGTGTCAGACACCACTGCTTTCTCAAGATTTGGTCATTTCAATGAGAATGCAATAAGAGACAGTTCTATATGAAGCTGATGCAAAAAATTACAGAGTTAGGCAGATATGGTTGCCAATAGCCAAAAGAACAGTACAATGGTTTGCCAATAGGGAACGAAGGTCTAAACTGTCGAAGTACACACAGCAGCCAGATGTATAGACAAAATGATCTCAAGGTTTTGCAATCCTTGTTTAAAATATAGTCATTTTATTCTTTTCTAATCATATGAAATGGATCTTTTTGTTTCTTTTCTCTTAGGTGTTCTTGGGAGGGGGTCAAATGCAACAGTGGCTGCTGTCTTCTAATCCAAAAGTTTGAGTAATTTTGGAAAACTTTTCTTAAATGTAACTATGGAACCCCTTCATTTTTCTTTTTAAATATCTTGGTTTTTAAAGTCATTTAAAAGCTATTAAGTAAGTGACAATCAAAGATGAAAAGAAAACGTAAAACAATAGAAAATCGATACACAAATTTACATGGTCTACTAATAAAGTGTTAGCTACGTCTACAGATAGGAGGAGTAGTTTTTATTAGACAGATAATTCTACATTACAGAGTCAGAAGTGCCAATAGGGATAAAGAGTTTATATGGCGCAATCCTTTGAACCAAAATCATAAATAGTACAAATAACATAAATACAAATACAACTTAGGTTTCGTTCAAAGAATCAAATAATAGATTCAAGTCATTCCAACAAAAGCTTTAGACCAACCGTTATTAGGAACAAACTATGATAATCTAGCCAGAGTTCTGCAGCATGTGTGCTTATTCCCCTTCATGTTGCAGGACTCAGAATTTCCATTTGTTTAAGACAGGCAATCAATATTAATGAAAATAATTAATAAACAAATAAATGCCATGGCCAAATCATAAAAGTAATAATTTGGTTTCATTTACCCATTAAAAAAATTGATTGGTGGCATTTAGATAAGTTTTGTTTTGGAGCAGGTGATGTCACAGTTTGATGCCTAGCTCTTGTTTTTTCCCCCTCTATTTTATCAGCTGCTTACCTCCCAAGTAATGCCTACCAAATAAGAGCCCACATTTGTCAACAACATTTAAAATTCCCTCAACCCTTTCATCTTCTTTTATAAATCACTACAAAATACTTGCAGTTTTTAAATGATTTATGAAGCTGAAGTCATAGAACAGCAGCCAGAGAAGAATACAGGAAACACCACATAGCTGATGGATGATTCTCTTTGCAAAGGTGTATTTAAGGACTCTTTCATATAAAAACCTCTATTCCTCTCTCCTTTTTCATGTCTATCAAAAAGGGTGTTTTTAGCTTCATTTGATTGGAAAATTGGCCTTTTGAAGATCAGTAGATTCTGAGCAAGTACCAGCCGTTGAAGATCGATGATCTGGTTAAGTTTGATTGTTTTTTTCCTCTTTTCTGTGTTCTTTGTTGTTGAAGCTCAAATTGATTCTCAAGATCCTGAAAATGCTGCTTTTCAACCAAGTCTTGGCTTTGTGATAGGGATTTTGGCAGTTATGTTTTTGTTGACATTTATTCTTCTTGTCTATGCAAAGTTCTGCCATAGAAGATCTTCTGTTCGTGGGGATGATGTAAATCTTCCTAGACAAATCAGGTCAAGTTCTCGGCTTTCTGGACTCGATAAGACGGTGATCGAGTCTCTTCCATTCTTTAGATTCTCCAGATTGAAAGGGTCCAAAGAAGGGCTGGAATGTGCAGTCTGTCTTTCGAAATTTGAAGACATCGAAATTCTCCGGTTGTTGCCGAAGTGCAAACATGCATTTCATATTAACTGCATTGATCATTGGCTCGAGAAACATGCTAGCTGTCCTCTTTGCAGGCAAAGTGTTGGCTCTGAGGACTTGAAGATCCTTGCTACTTCAAACAGTATGAGGTTCTTATTGAGCAACTTATCAGAGCTGAAACAAGACTCAAACATAGAGCTCTTTGTACAAAGAGAAGAAGAAGAACAACGACAAATACTCCATGGCTCTTCTAGATTCAGCATCGGAAGAAGCTTCAGAAAGATCTTAAGGAGTGATAAGGAAGAGGAAATGTTGATACAAAAGGCTTGTGGTGATGGAGATGAGGACATGAAGAACTTACACAGACACAACCACAAAATTATCGTATCCGATTTTGTTTTCATGAATCGATGGAGCAACGTAAGTTCGTCAGACCTGATGTTCTTGAACAAAGAGATGATGGATGCCATTTCAAGCAGTAGATTCACTTCCTTGGAAACCGATATAGAACAGTCAACGCAGCCAAGATCAATACAAATTGAAGAAATTTTGAAGATCAAGGAGGAGATGGAAATAAAGAGATCATTTGAGAGCAAACTCAATACAATAAACCAAAGCAACTCAGTTCTGGGATTCCCTTCTACATCACAATCTGCTGCAAATCCCAGTCAAACAACAAGAATTACAAGCCCAGATGCAAGAAGATCAGTTTCAGAAATCACAGGCATATCAAGATTTGGTAACGAAGATCTGTATATGAATTTTAACAGAAAAGTTGAAACTGGGGAATCTTCTGATCTGGGAAACAATGTAAAGCAAGAAAGAGTGAGACAAATTTGGTACCCAATTGCTAAAAGAACAGTCCAATGGTTTGCCAATAGAGAAACAAGGTTTCAAACAGCTGACAACAGACAACAAACAGTAGAAAATGTATAAATCAAACCAGTTCTTTGCCCTTTTCTTTCATTATATTTATTTTGCAATTTCCTTTTACTGGGTCCCAAATTTAGAGGACTATTAGTTTAGATAGTTAAAGAAATGGTTCCTTTCAAATGTAACCACACAAATCAGAAGTTTTTAAAGTCTATATTGTGTAAATTTCTCTACAAGTTTCACTAATGTTTTGAT

mRNA sequence

ATGCACAAGCACCTCCTTCACCAAAAGCTGATTCTGGTATTCCACAAAACTTCACCATTGCTATTGGAGTCCTCTCCATTATGTTCTCCCTGGCCTTCATTCTTGTTCTTTATGCAAAATTCTGTCACCAGACTTCCCATCTTCGTGGCGAACCGCAAGCTCATCTTGGGCTTGGACTTCTCAGATCAGACTCGAGATTTTTCTGGGGTTGATCAAATGGTGATTGATGCACTTCCTTTCTTTAAATTCTCATCACTCCAACGATCAAGAGAAGGGCTGGAATGTGCTGTTTGCTTAACCAAATTTGAGGATATTGAAGTTCTTCGGTTGCTTCCGAAGTGCAAGCATGCATTTCACATTGGCTGTATTGATCATTGGCTCGAAAAGCAATCAAACTGTCCGCTTTGTCGGTGTAGGATCAGCATCGAGGACGTTGCATTCTTTACCTATTCCAACAGTATGAGACTAATGAGGAACAACAGCATTTGTGCAGAGAGAGAGATCATCATAACTCTTCAAGAAATGCTTGGAGCCATGTCCAGCAATAGATTCTCTTCTTTGGATTCAGAAAGTGTTTGCCGATCGGCAACAAGAGAATCTGAGGGAAAAAGGACTACACAAATTAAAGAAGAGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGTTTAGTTTCAATCTCAGGGAACGAAGGTCTAAACTGTCGAAGTACACACAGCAGCCAGATGTATAGACAAAATGATCTCAAGGTGTTCTTGGGAGGGGGTCAAATGCAACAGTGGCTGCTGTCTTCTAATCCAAAAGTTTGAGTAATTTTGGAAAACTTTTCTTAAATGTAACTATGGAACCCCTTCATTTTTCTTTTTAAATATCTTGGTTTTTAAAGTCATTTAAAAGCTATTAAGTAAGTGACAATCAAAGATGAAAAGAAAACGTAAAACAATAGAAAATCGATACACAAATTTACATGGTCTACTAATAAAGTGTTAGCTACGTCTACAGATAGGAGGAGTAGTTTTTATTAGACAGATAATTCTACATTACAGAGTCAGAAGTGCCAATAGGGATAAAGAGTTTATATGGCGCAATCCTTTGAACCAAAATCATAAATAGTACAAATAACATAAATACAAATACAACTTAGGTTTCGTTCAAAGAATCAAATAATAGATTCAAGTCATTCCAACAAAAGCTTTAGACCAACCGTTATTAGGAACAAACTATGATAATCTAGCCAGAGTTCTGCAGCATGTGTGCTTATTCCCCTTCATGTTGCAGGACTCAGAATTTCCATTTGTTTAAGACAGGCAATCAATATTAATGAAAATAATTAATAAACAAATAAATGCCATGGCCAAATCATAAAAGTAATAATTTGGTTTCATTTACCCATTAAAAAAATTGATTGGTGGCATTTAGATAAGTTTTGTTTTGGAGCAGGTGATGTCACAGTTTGATGCCTAGCTCTTGTTTTTTCCCCCTCTATTTTATCAGCTGCTTACCTCCCAAGTAATGCCTACCAAATAAGAGCCCACATTTGTCAACAACATTTAAAATTCCCTCAACCCTTTCATCTTCTTTTATAAATCACTACAAAATACTTGCAGTTTTTAAATGATTTATGAAGCTGAAGTCATAGAACAGCAGCCAGAGAAGAATACAGGAAACACCACATAGCTGATGGATGATTCTCTTTGCAAAGGTGTATTTAAGGACTCTTTCATATAAAAACCTCTATTCCTCTCTCCTTTTTCATGTCTATCAAAAAGGGTGTTTTTAGCTTCATTTGATTGGAAAATTGGCCTTTTGAAGATCAGTAGATTCTGAGCAAGTACCAGCCGTTGAAGATCGATGATCTGGTTAAGTTTGATTGTTTTTTTCCTCTTTTCTGTGTTCTTTGTTGTTGAAGCTCAAATTGATTCTCAAGATCCTGAAAATGCTGCTTTTCAACCAAGTCTTGGCTTTGTGATAGGGATTTTGGCAGTTATGTTTTTGTTGACATTTATTCTTCTTGTCTATGCAAAGTTCTGCCATAGAAGATCTTCTGTTCGTGGGGATGATGTAAATCTTCCTAGACAAATCAGGTCAAGTTCTCGGCTTTCTGGACTCGATAAGACGGTGATCGAGTCTCTTCCATTCTTTAGATTCTCCAGATTGAAAGGGTCCAAAGAAGGGCTGGAATGTGCAGTCTGTCTTTCGAAATTTGAAGACATCGAAATTCTCCGGTTGTTGCCGAAGTGCAAACATGCATTTCATATTAACTGCATTGATCATTGGCTCGAGAAACATGCTAGCTGTCCTCTTTGCAGGCAAAGTGTTGGCTCTGAGGACTTGAAGATCCTTGCTACTTCAAACAGTATGAGGTTCTTATTGAGCAACTTATCAGAGCTGAAACAAGACTCAAACATAGAGCTCTTTGTACAAAGAGAAGAAGAAGAACAACGACAAATACTCCATGGCTCTTCTAGATTCAGCATCGGAAGAAGCTTCAGAAAGATCTTAAGGAGTGATAAGGAAGAGGAAATGTTGATACAAAAGGCTTGTGGTGATGGAGATGAGGACATGAAGAACTTACACAGACACAACCACAAAATTATCGTATCCGATTTTGTTTTCATGAATCGATGGAGCAACGTAAGTTCGTCAGACCTGATGTTCTTGAACAAAGAGATGATGGATGCCATTTCAAGCAGTAGATTCACTTCCTTGGAAACCGATATAGAACAGTCAACGCAGCCAAGATCAATACAAATTGAAGAAATTTTGAAGATCAAGGAGGAGATGGAAATAAAGAGATCATTTGAGAGCAAACTCAATACAATAAACCAAAGCAACTCAGTTCTGGGATTCCCTTCTACATCACAATCTGCTGCAAATCCCAGTCAAACAACAAGAATTACAAGCCCAGATGCAAGAAGATCAGTTTCAGAAATCACAGGCATATCAAGATTTGGTAACGAAGATCTGTATATGAATTTTAACAGAAAAGTTGAAACTGGGGAATCTTCTGATCTGGGAAACAATGTAAAGCAAGAAAGAGTGAGACAAATTTGGTACCCAATTGCTAAAAGAACAGTCCAATGGTTTGCCAATAGAGAAACAAGGTTTCAAACAGCTGACAACAGACAACAAACAGTAGAAAATGTATAAATCAAACCAGTTCTTTGCCCTTTTCTTTCATTATATTTATTTTGCAATTTCCTTTTACTGGGTCCCAAATTTAGAGGACTATTAGTTTAGATAGTTAAAGAAATGGTTCCTTTCAAATGTAACCACACAAATCAGAAGTTTTTAAAGTCTATATTGTGTAAATTTCTCTACAAGTTTCACTAATGTTTTGAT

Coding sequence (CDS)

ATGCACAAGCACCTCCTTCACCAAAAGCTGATTCTGGTATTCCACAAAACTTCACCATTGCTATTGGAGTCCTCTCCATTATGTTCTCCCTGGCCTTCATTCTTGTTCTTTATGCAAAATTCTGTCACCAGACTTCCCATCTTCGTGGCGAACCGCAAGCTCATCTTGGGCTTGGACTTCTCAGATCAGACTCGAGATTTTTCTGGGGTTGATCAAATGGTGATTGATGCACTTCCTTTCTTTAAATTCTCATCACTCCAACGATCAAGAGAAGGGCTGGAATGTGCTGTTTGCTTAACCAAATTTGAGGATATTGAAGTTCTTCGGTTGCTTCCGAAGTGCAAGCATGCATTTCACATTGGCTGTATTGATCATTGGCTCGAAAAGCAATCAAACTGTCCGCTTTGTCGGTGTAGGATCAGCATCGAGGACGTTGCATTCTTTACCTATTCCAACAGTATGAGACTAATGAGGAACAACAGCATTTGTGCAGAGAGAGAGATCATCATAACTCTTCAAGAAATGCTTGGAGCCATGTCCAGCAATAGATTCTCTTCTTTGGATTCAGAAAGTGTTTGCCGATCGGCAACAAGAGAATCTGAGGGAAAAAGGACTACACAAATTAAAGAAGAGATGGAAATGAAGAGATCATTTGAGAGGAGGATAAGCATAGCTGAGAAAAATAGTTTAGTTTCAATCTCAGGGAACGAAGGTCTAAACTGTCGAAGTACACACAGCAGCCAGATGTATAGACAAAATGATCTCAAGGTGTTCTTGGGAGGGGGTCAAATGCAACAGTGGCTGCTGTCTTCTAATCCAAAAGTTTGA

Protein sequence

MHKHLLHQKLILVFHKTSPLLLESSPLCSPWPSFLFFMQNSVTRLPIFVANRKLILGLDFSDQTRDFSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHWLEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNNSICAEREIIITLQEMLGAMSSNRFSSLDSESVCRSATRESEGKRTTQIKEEMEMKRSFERRISIAEKNSLVSISGNEGLNCRSTHSSQMYRQNDLKVFLGGGQMQQWLLSSNPKV

Homology

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BLAST of CcUC06G118710 vs. NCBI nr
Match: XP_008462696.1 (PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis melo])

HSP 1 Score: 256.1 bits (653), Expect = 3.3e-64
Identity = 141/216 (65.28%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 67  FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 126
           FSGVDQ VIDALPFF+FSSL+ SREGLECAVCL+KFEDIEVLRLLPKCKHAFHIGCIDHW
Sbjct: 86  FSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDHW 145

Query: 127 LEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNNS-----ICAEREIIITLQ-------- 186
           LEK S+CP+CRCRIS+EDVAFF  SNS+RL+RNNS       +  E+ +  +        
Sbjct: 146 LEKHSSCPICRCRISVEDVAFFK-SNSIRLIRNNSQPDLPQDSHMELFVLREENHHYSSR 205

Query: 187 ------------EMLGAMSSNRFSSLDSESVCRSATRESEGKRTTQIKEEMEMKRSFERR 246
                       EMLGAMSS+RFSSL+SES+ RSATRE EGKRT+QIKE MEMKRSFERR
Sbjct: 206 SNDGTSFRKIGKEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERR 265

Query: 247 ISIAEKNSLVSISGNEGLNCRSTHSSQMYRQNDLKV 258
           ISIAEKNSLVSISG    +  +  +S+    N+  V
Sbjct: 266 ISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSV 300

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BLAST of CcUC06G118710 vs. NCBI nr
Match: KAA0046520.1 (E3 ubiquitin-protein ligase ATL42-like [Cucumis melo var. makuwa] >TYK28739.1 E3 ubiquitin-protein ligase ATL42-like [Cucumis melo var. makuwa])

HSP 1 Score: 255.8 bits (652), Expect = 4.4e-64
Identity = 143/229 (62.45%), Postives = 164/229 (71.62%), Query Frame = 0


Query: 67  FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 126
           FSGVDQ VIDALPFF+FSSL+ SREGLECAVCL+KFEDIEVLRLLPKCKHAFHIGCIDHW
Sbjct: 86  FSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDHW 145

Query: 127 LEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNNSI------------------------ 186
           LEK S+CP+CRCRIS+EDVAFF  SNS+RL+RNNS                         
Sbjct: 146 LEKHSSCPICRCRISVEDVAFFK-SNSIRLIRNNSQPDLPQDSHMELFVLREENHHYSSR 205

Query: 187 -------------CAEREIIITLQ-EMLGAMSSNRFSSLDSESVCRSATRESEGKRTTQI 246
                          E+E++I  + EMLGAMSS+RFSSL+SES+ RSATRE EGKRT+QI
Sbjct: 206 SNDGTSFRKIGKGSKEKEVLIESEAEMLGAMSSSRFSSLESESIRRSATREREGKRTSQI 265

Query: 247 KEEMEMKRSFERRISIAEKNSLVSISGNEGLNCRSTHSSQMYRQNDLKV 258
           KE MEMKRSFERRISIAEKNSLVSISG    +  +  +S+    N+  V
Sbjct: 266 KEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSV 313

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BLAST of CcUC06G118710 vs. NCBI nr
Match: KAE8647036.1 (hypothetical protein Csa_023000 [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 7.2e-59
Identity = 137/249 (55.02%), Postives = 154/249 (61.85%), Query Frame = 0


Query: 67  FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 126
           FSGVDQ VIDALPFF+FSSL+ SREGLECAVCL+KFEDIEVLRLLPKCKHAFHIGCIDHW
Sbjct: 40  FSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDHW 99

Query: 127 LEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNNS-----------ICAERE-------- 186
           LEK S+CP+CRCRI +ED+AFF  SNS+RL+RNNS           +  +RE        
Sbjct: 100 LEKHSSCPICRCRIGVEDIAFFK-SNSIRLIRNNSRPELPQDSRIELFVQREENHHNSSR 159

Query: 187 ------------------------------------------------------------ 236
                                                                       
Sbjct: 160 SNNGTSFRNIGKGNKEKEVLIENEAGECESEERVLFHKHKHKILVSDFVFMNRWSNLSSS 219

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BLAST of CcUC06G118710 vs. NCBI nr
Match: XP_031742649.1 (E3 ubiquitin-protein ligase ATL42-like, partial [Cucumis sativus])

HSP 1 Score: 238.4 bits (607), Expect = 7.2e-59
Identity = 137/249 (55.02%), Postives = 154/249 (61.85%), Query Frame = 0


Query: 67  FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 126
           FSGVDQ VIDALPFF+FSSL+ SREGLECAVCL+KFEDIEVLRLLPKCKHAFHIGCIDHW
Sbjct: 74  FSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDHW 133

Query: 127 LEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNNS-----------ICAERE-------- 186
           LEK S+CP+CRCRI +ED+AFF  SNS+RL+RNNS           +  +RE        
Sbjct: 134 LEKHSSCPICRCRIGVEDIAFFK-SNSIRLIRNNSRPELPQDSRIELFVQREENHHNSSR 193

Query: 187 ------------------------------------------------------------ 236
                                                                       
Sbjct: 194 SNNGTSFRNIGKGNKEKEVLIENEAGECESEERVLFHKHKHKILVSDFVFMNRWSNLSSS 253

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BLAST of CcUC06G118710 vs. NCBI nr
Match: XP_031738779.1 (putative RING-H2 finger protein ATL12 [Cucumis sativus] >KAE8652892.1 hypothetical protein Csa_022677 [Cucumis sativus])

HSP 1 Score: 236.9 bits (603), Expect = 2.1e-58
Identity = 139/261 (53.26%), Postives = 158/261 (60.54%), Query Frame = 0


Query: 67  FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 126
           FSGVDQ VIDALPFF+FSSL+ SREGLECAVCL+ FEDIEVLRLLPKCKHAFHIGCIDHW
Sbjct: 86  FSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSNFEDIEVLRLLPKCKHAFHIGCIDHW 145

Query: 127 LEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNNSIC----------------------- 186
           LEK S+CP+CRCRI +ED+AFF  SNS+RL+RNNS                         
Sbjct: 146 LEKHSSCPICRCRIGVEDIAFFK-SNSIRLIRNNSRSELPQDSRIELFVQREENHHNSSR 205

Query: 187 --------------AEREIIITLQ------------------------------------ 246
                          E+E++I  +                                    
Sbjct: 206 SNNGTSFRNIGKGNKEKEVLIENEAGECESEERVLFHKHKHKILVSDFVFMNRWSNLSSS 265

Query: 247 -------EMLGAMSSNRFSSLDSESVCRSATRESEGKRTTQIKEEMEMKRSFERRISIAE 248
                  EMLG MSSNRFSSLDSES+ +SATRE EGK+T+QIKEEMEMKRSFERRISIAE
Sbjct: 266 DLVFLNTEMLGVMSSNRFSSLDSESISQSATREKEGKKTSQIKEEMEMKRSFERRISIAE 325

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BLAST of CcUC06G118710 vs. ExPASy Swiss-Prot
Match: Q9SL78 (Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana OX=3702 GN=ATL12 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.3e-30
Identity = 76/179 (42.46%), Postives = 113/179 (63.13%), Query Frame = 0


Query: 67  FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 126
           FSG+D+  I++LPFF+FS+L+  ++GLEC+VCL+KFED+E+LRLLPKC+HAFHIGCID W
Sbjct: 96  FSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQW 155

Query: 127 LEKQSNCPLCRCRISIED--VAFFTYSNSMRLMRNNSICAE---REIIITLQEMLGAMSS 186
           LE+ + CPLCR R++IED        S S+R++  +    E    EI I  +E      S
Sbjct: 156 LEQHATCPLCRNRVNIEDDLSVLGNSSTSLRILNQSETREEDSRLEIYIEREEGTND-GS 215

Query: 187 NRFSSLDSESVCRSATRESEGKRTTQIKEEMEMKRSFERRISIAE---KNSLVSISGNE 238
           +RFSS   + + +S   E EG       +E ++   F  RI +++   KN   +I+ ++
Sbjct: 216 SRFSSF-RKILKKSLLLEREGNENI---DEKKLMHKFNHRIVVSDAVFKNRWSNITSSD 269

[Close]

BLAST of CcUC06G118710 vs. ExPASy Swiss-Prot
Match: Q5XF85 (E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 SV=2)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 79/207 (38.16%), Postives = 122/207 (58.94%), Query Frame = 0


Query: 51  NRKLILGLDFSDQTRD---FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEV 110
           +R+L  G+ F+  T     FSG+D+  I++LP F+FS+L+ S++GL+C+VCL+KFE +E+
Sbjct: 76  DRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEI 135

Query: 111 LRLLPKCKHAFHIGCIDHWLEKQSNCPLCRCRISI-EDVAFFTYSNSMRLMRNNSI---- 170
           LRLLPKC+HAFHIGCID WLE+ + CPLCR R+S+ ED +  T  NS R +  + I    
Sbjct: 136 LRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNGNSFRFLNQSEIREDS 195

Query: 171 -------CAEREIIITLQEMLGAMSSNRFSSLDS-ESVCRSATRESE-GKRTTQIKEEME 230
                    E E  I  +E+ G   S+RFS  +S   + +   +E          K+E +
Sbjct: 196 SLELYIEREEEEERIHREELSG---SSRFSIGESFRKILKLGNKEKTLLDEHVNDKDEKK 255

Query: 231 MKRSFERRISIAE---KNSLVSISGNE 238
           +   F  RI +++   KN   ++S ++
Sbjct: 256 LMHKFNHRIVVSDVVFKNRWSNVSSSD 279

[Close]

BLAST of CcUC06G118710 vs. ExPASy Swiss-Prot
Match: Q5EAE9 (RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-25
Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 65  RDFSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCID 124
           R  SG+D+ VI++LP F+F +L   ++GLECAVCL +FE  EVLRLLPKCKHAFH+ C+D
Sbjct: 116 RKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVD 175

Query: 125 HWLEKQSNCPLCRCRISIEDVAFFTYSNS 154
            WL+  S CPLCR R+  ED+      NS
Sbjct: 176 TWLDAHSTCPLCRYRVDPEDILLIGDCNS 204

[Close]

BLAST of CcUC06G118710 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.3e-18
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 68  SGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHWL 127
           SG+DQ +IDALP F +  ++ ++E  +CAVCL +F + + LRLLP C HAFHI CID WL
Sbjct: 117 SGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWL 176

Query: 128 EKQSNCPLCR 138
              S CPLCR
Sbjct: 177 LSNSTCPLCR 186

[Close]

BLAST of CcUC06G118710 vs. ExPASy Swiss-Prot
Match: Q7X843 (RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2)

HSP 1 Score: 92.8 bits (229), Expect = 6.4e-18
Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 68  SGVDQMVIDALPFFKFSSLQRSRE-GLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 127
           SG+DQ  IDALP F + ++  S E   +CAVCL +F D + LRLLP C HAFH+ CID W
Sbjct: 179 SGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTW 238

Query: 128 LEKQSNCPLCRCRISIEDVAF 148
           L   S CPLCR  +S  +V +
Sbjct: 239 LLSNSTCPLCRRSLSTSNVCY 259

[Close]

BLAST of CcUC06G118710 vs. ExPASy TrEMBL
Match: A0A1S3CHH4 (E3 ubiquitin-protein ligase ATL42-like OS=Cucumis melo OX=3656 GN=LOC103500996 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 141/216 (65.28%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 67  FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 126
           FSGVDQ VIDALPFF+FSSL+ SREGLECAVCL+KFEDIEVLRLLPKCKHAFHIGCIDHW
Sbjct: 86  FSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDHW 145

Query: 127 LEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNNS-----ICAEREIIITLQ-------- 186
           LEK S+CP+CRCRIS+EDVAFF  SNS+RL+RNNS       +  E+ +  +        
Sbjct: 146 LEKHSSCPICRCRISVEDVAFFK-SNSIRLIRNNSQPDLPQDSHMELFVLREENHHYSSR 205

Query: 187 ------------EMLGAMSSNRFSSLDSESVCRSATRESEGKRTTQIKEEMEMKRSFERR 246
                       EMLGAMSS+RFSSL+SES+ RSATRE EGKRT+QIKE MEMKRSFERR
Sbjct: 206 SNDGTSFRKIGKEMLGAMSSSRFSSLESESIRRSATREREGKRTSQIKEAMEMKRSFERR 265

Query: 247 ISIAEKNSLVSISGNEGLNCRSTHSSQMYRQNDLKV 258
           ISIAEKNSLVSISG    +  +  +S+    N+  V
Sbjct: 266 ISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSV 300

[Close]

BLAST of CcUC06G118710 vs. ExPASy TrEMBL
Match: A0A5D3DZA7 (E3 ubiquitin-protein ligase ATL42-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00780 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.1e-64
Identity = 143/229 (62.45%), Postives = 164/229 (71.62%), Query Frame = 0


Query: 67  FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 126
           FSGVDQ VIDALPFF+FSSL+ SREGLECAVCL+KFEDIEVLRLLPKCKHAFHIGCIDHW
Sbjct: 86  FSGVDQKVIDALPFFRFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCKHAFHIGCIDHW 145

Query: 127 LEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNNSI------------------------ 186
           LEK S+CP+CRCRIS+EDVAFF  SNS+RL+RNNS                         
Sbjct: 146 LEKHSSCPICRCRISVEDVAFFK-SNSIRLIRNNSQPDLPQDSHMELFVLREENHHYSSR 205

Query: 187 -------------CAEREIIITLQ-EMLGAMSSNRFSSLDSESVCRSATRESEGKRTTQI 246
                          E+E++I  + EMLGAMSS+RFSSL+SES+ RSATRE EGKRT+QI
Sbjct: 206 SNDGTSFRKIGKGSKEKEVLIESEAEMLGAMSSSRFSSLESESIRRSATREREGKRTSQI 265

Query: 247 KEEMEMKRSFERRISIAEKNSLVSISGNEGLNCRSTHSSQMYRQNDLKV 258
           KE MEMKRSFERRISIAEKNSLVSISG    +  +  +S+    N+  V
Sbjct: 266 KEAMEMKRSFERRISIAEKNSLVSISGISSTSDSNASTSKTTNLNERSV 313

[Close]

BLAST of CcUC06G118710 vs. ExPASy TrEMBL
Match: A0A6J1CUV0 (E3 ubiquitin-protein ligase ATL42-like OS=Momordica charantia OX=3673 GN=LOC111014428 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.1e-57
Identity = 134/274 (48.91%), Postives = 162/274 (59.12%), Query Frame = 0


Query: 56  LGLDFSDQTRDFSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCK 115
           LG+        FSGVDQ VID+LPFF+FSSL+ SREGLECAVCL+KFEDIEVLRLLPKCK
Sbjct: 71  LGVGLLRSDLRFSGVDQKVIDSLPFFRFSSLKGSREGLECAVCLSKFEDIEVLRLLPKCK 130

Query: 116 HAFHIGCIDHWLEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNNS-----------ICA 175
           HAFHIGC+DHWLE  S+CP+CRCRIS+EDVAFFT SNSMRLMRNNS           +  
Sbjct: 131 HAFHIGCVDHWLENHSSCPMCRCRISVEDVAFFTCSNSMRLMRNNSQSELPQDPNMELFV 190

Query: 176 ERE--------------------------------------------------------- 235
           +RE                                                         
Sbjct: 191 QREEDHHNSSRFNIGSSFGKIGKGSKEKDGARERQSEEHVVFHKHKHKILVSDFVFMNRW 250

Query: 236 -------IIITLQEMLGAMSSNRFSSLDSESVCRSATRESEGKRTTQIKEEMEMKRSFER 255
                  ++    EMLGAMSSNRFSSLD++++ RS T E+E KR + IKEEMEMKRSFE 
Sbjct: 251 SNLSSSDLMFLNTEMLGAMSSNRFSSLDTDNIRRSETGETEDKRISNIKEEMEMKRSFET 310

[Close]

BLAST of CcUC06G118710 vs. ExPASy TrEMBL
Match: A0A2I4E677 (E3 ubiquitin-protein ligase ATL42-like OS=Juglans regia OX=51240 GN=LOC108986662 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.2e-40
Identity = 106/256 (41.41%), Postives = 133/256 (51.95%), Query Frame = 0


Query: 58  LDFSDQTRDFSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHA 117
           L F   +  FSG+D+ VI++LPFF+FSSL  S+EGLECAVCL+KFEDIE+LRLLPKCKHA
Sbjct: 74  LGFIRSSSRFSGIDKTVIESLPFFRFSSLNGSKEGLECAVCLSKFEDIEILRLLPKCKHA 133

Query: 118 FHIGCIDHWLEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNNSICAEREIIITLQ---- 177
           FHI CID+WLEK S+CPLCR R+S+ED   FTY+NSMRLM  + +  +  I + +Q    
Sbjct: 134 FHIDCIDNWLEKHSSCPLCRHRVSVEDPTIFTYTNSMRLMDQSEMRGDSTIELFVQREED 193

Query: 178 ------------------------------------------------------------ 236
                                                                       
Sbjct: 194 RRGSSRFSLGSSFRKAGKVDKEEKSLMQEEEAGYGEEAHGVLHKHNHKIIASDFVFKNRW 253

[Close]

BLAST of CcUC06G118710 vs. ExPASy TrEMBL
Match: A0A2C9W3Y9 (RING-type domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G024800 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 8.1e-40
Identity = 102/244 (41.80%), Postives = 124/244 (50.82%), Query Frame = 0


Query: 64  TRDFSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCI 123
           T  FSG+D+ VI++LPFF+FSSL+ SR+GLEC VCL+KFEDIEVLRLLPKCKHAFHI C+
Sbjct: 82  TSRFSGIDKTVIESLPFFRFSSLKGSRDGLECVVCLSKFEDIEVLRLLPKCKHAFHINCV 141

Query: 124 DHWLEKQSNCPLCRCRISIEDVAFFTYSNSMRLMRNN----------------------- 183
           D WLEK S+CPLCRC++S ED   FTYSNSMR +  N                       
Sbjct: 142 DQWLEKHSSCPLCRCKVSAEDPTIFTYSNSMRFLFGNQSELQADSNVELFVQREETHRGS 201

Query: 184 ------------------------------------------------------------ 224
                                                                       
Sbjct: 202 SRFSIGSSFRKVEKGNKDEEDALIQVEEEEADTSPDDDQTKIFDKFNHKIVLSDVVLKNR 261

[Close]

BLAST of CcUC06G118710 vs. TAIR 10
Match: AT2G20030.1 (RING/U-box superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 5.2e-31
Identity = 76/179 (42.46%), Postives = 113/179 (63.13%), Query Frame = 0


Query: 67  FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 126
           FSG+D+  I++LPFF+FS+L+  ++GLEC+VCL+KFED+E+LRLLPKC+HAFHIGCID W
Sbjct: 96  FSGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQW 155

Query: 127 LEKQSNCPLCRCRISIED--VAFFTYSNSMRLMRNNSICAE---REIIITLQEMLGAMSS 186
           LE+ + CPLCR R++IED        S S+R++  +    E    EI I  +E      S
Sbjct: 156 LEQHATCPLCRNRVNIEDDLSVLGNSSTSLRILNQSETREEDSRLEIYIEREEGTND-GS 215

Query: 187 NRFSSLDSESVCRSATRESEGKRTTQIKEEMEMKRSFERRISIAE---KNSLVSISGNE 238
           +RFSS   + + +S   E EG       +E ++   F  RI +++   KN   +I+ ++
Sbjct: 216 SRFSSF-RKILKKSLLLEREGNENI---DEKKLMHKFNHRIVVSDAVFKNRWSNITSSD 269

[Close]

BLAST of CcUC06G118710 vs. TAIR 10
Match: AT4G28890.1 (RING/U-box superfamily protein )

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-30
Identity = 79/207 (38.16%), Postives = 122/207 (58.94%), Query Frame = 0


Query: 51  NRKLILGLDFSDQTRD---FSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEV 110
           +R+L  G+ F+  T     FSG+D+  I++LP F+FS+L+ S++GL+C+VCL+KFE +E+
Sbjct: 76  DRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEI 135

Query: 111 LRLLPKCKHAFHIGCIDHWLEKQSNCPLCRCRISI-EDVAFFTYSNSMRLMRNNSI---- 170
           LRLLPKC+HAFHIGCID WLE+ + CPLCR R+S+ ED +  T  NS R +  + I    
Sbjct: 136 LRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNGNSFRFLNQSEIREDS 195

Query: 171 -------CAEREIIITLQEMLGAMSSNRFSSLDS-ESVCRSATRESE-GKRTTQIKEEME 230
                    E E  I  +E+ G   S+RFS  +S   + +   +E          K+E +
Sbjct: 196 SLELYIEREEEEERIHREELSG---SSRFSIGESFRKILKLGNKEKTLLDEHVNDKDEKK 255

Query: 231 MKRSFERRISIAE---KNSLVSISGNE 238
           +   F  RI +++   KN   ++S ++
Sbjct: 256 LMHKFNHRIVVSDVVFKNRWSNVSSSD 279

[Close]

BLAST of CcUC06G118710 vs. TAIR 10
Match: AT5G05810.1 (RING/U-box superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 7.8e-27
Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 0


Query: 65  RDFSGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCID 124
           R  SG+D+ VI++LP F+F +L   ++GLECAVCL +FE  EVLRLLPKCKHAFH+ C+D
Sbjct: 62  RKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVD 121

Query: 125 HWLEKQSNCPLCRCRISIEDVAFFTYSNS 154
            WL+  S CPLCR R+  ED+      NS
Sbjct: 122 TWLDAHSTCPLCRYRVDPEDILLIGDCNS 150

[Close]

BLAST of CcUC06G118710 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 9.2e-20
Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = 0


Query: 68  SGVDQMVIDALPFFKFSSLQRSREGLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHWL 127
           SG+DQ +IDALP F +  ++ ++E  +CAVCL +F + + LRLLP C HAFHI CID WL
Sbjct: 117 SGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWL 176

Query: 128 EKQSNCPLCR 138
              S CPLCR
Sbjct: 177 LSNSTCPLCR 186

[Close]

BLAST of CcUC06G118710 vs. TAIR 10
Match: AT3G48030.1 (hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.6e-19
Identity = 42/81 (51.85%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 68  SGVDQMVIDALPFFKFSSLQRSRE-GLECAVCLTKFEDIEVLRLLPKCKHAFHIGCIDHW 127
           SG+DQ  IDALP F + ++  S E   +CAVCL +F D + LRLLP C HAFH+ CID W
Sbjct: 179 SGLDQTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTW 238

Query: 128 LEKQSNCPLCRCRISIEDVAF 148
           L   S CPLCR  +S  +V +
Sbjct: 239 LLSNSTCPLCRRSLSTSNVCY 259

The following BLAST results are available for this feature:

BLAST of CcUC06G118710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462696.1	3.3e-64	65.28	PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Cucumis melo]	[more]
KAA0046520.1	4.4e-64	62.45	E3 ubiquitin-protein ligase ATL42-like [Cucumis melo var. makuwa] >TYK28739.1 E3...	[more]
KAE8647036.1	7.2e-59	55.02	hypothetical protein Csa_023000 [Cucumis sativus]	[more]
XP_031742649.1	7.2e-59	55.02	E3 ubiquitin-protein ligase ATL42-like, partial [Cucumis sativus]	[more]
XP_031738779.1	2.1e-58	53.26	putative RING-H2 finger protein ATL12 [Cucumis sativus] >KAE8652892.1 hypothetic...	[more]

BLAST of CcUC06G118710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SL78	7.3e-30	42.46	Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana OX=3702 GN=ATL12 P...	[more]
Q5XF85	1.6e-29	38.16	E3 ubiquitin-protein ligase ATL42 OS=Arabidopsis thaliana OX=3702 GN=ATL42 PE=1 ...	[more]
Q5EAE9	1.1e-25	56.18	RING-H2 finger protein ATL43 OS=Arabidopsis thaliana OX=3702 GN=ATL43 PE=2 SV=2	[more]
Q8GW38	1.3e-18	55.71	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
Q7X843	6.4e-18	51.85	RING-H2 finger protein ATL48 OS=Arabidopsis thaliana OX=3702 GN=ATL48 PE=1 SV=2	[more]

BLAST of CcUC06G118710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CHH4	1.6e-64	65.28	E3 ubiquitin-protein ligase ATL42-like OS=Cucumis melo OX=3656 GN=LOC103500996 P...	[more]
A0A5D3DZA7	2.1e-64	62.45	E3 ubiquitin-protein ligase ATL42-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1CUV0	1.1e-57	48.91	E3 ubiquitin-protein ligase ATL42-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A2I4E677	1.2e-40	41.41	E3 ubiquitin-protein ligase ATL42-like OS=Juglans regia OX=51240 GN=LOC108986662...	[more]
A0A2C9W3Y9	8.1e-40	41.80	RING-type domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G024...	[more]

BLAST of CcUC06G118710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20030.1	5.2e-31	42.46	RING/U-box superfamily protein	[more]
AT4G28890.1	1.2e-30	38.16	RING/U-box superfamily protein	[more]
AT5G05810.1	7.8e-27	56.18	RING/U-box superfamily protein	[more]
AT1G23980.1	9.2e-20	55.71	RING/U-box superfamily protein	[more]
AT3G48030.1	4.6e-19	51.85	hypoxia-responsive family protein / zinc finger (C3HC4-type RING finger) family ...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 208..228
None	No IPR available	PANTHER	PTHR46539:SF1	E3 UBIQUITIN-PROTEIN LIGASE ATL42	coord: 63..163
None	No IPR available	PANTHER	PTHR46539	E3 UBIQUITIN-PROTEIN LIGASE ATL42	coord: 63..163
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 94..137 e-value: 1.72131E-17 score: 72.3345
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 74..143
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 95..136 e-value: 3.0E-7 score: 40.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 94..137 e-value: 2.8E-12 score: 46.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 95..137 score: 12.386007
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 69..145 e-value: 2.3E-21 score: 76.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G118710.1	CcUC06G118710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane