CcUC06G118200 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC06G118200
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Coiled-coil domain-containing protein 9-like
Location	CicolChr06: 12499651 .. 12510382 (-)
RNA-Seq Expression	CcUC06G118200
Synteny	CcUC06G118200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTACTCATCGCCATCGTCATCAGCACTCGTCGCCATCATCACAGCTTTCAGCGTAGCGGCATCATCATAGTCCTCGCGCCGCAGCGTTTCGGTCCTCATCGCGCCGCATCGTCACAACCTGCATTTCACCGCATCATCAGTCCATCGCCACATCATCACAGCCCGCATTTCGCCACATCATCACAGCCCCCATTTTGCCGCATCATCATAGTCTTCATCGCCGCGTCGCCTCAGCTCTCTTTGCGACGCGTCGACACAGCTTTCATAGCACTCTGCCGCAGTGTAGGGAAGTCGCTCAATCTCGCTATCTCGCTTAGTCTCGCTCAGTGTCGCTCAGTCTCACTGAGTCTCGCTGTCTCGTTCAGTCTCCCTGCAGTCTCGCTCGCGTAGGTAAGGGGCTTACTACCGAGCTTTAATGACGCTGCGTAGGTAAGGGACTTACTACCGAGCTTTAATGACGCCTAATGTCTAATTGTGTTGTTGACTGTTGAATGTCACTGTGAACTTTTGTCTCGGATGTGGTTTGCTATGGTTGTTTCGGTATGCCAAGTTTGTAGTTTGTAAGTAAAATTCTTATGCTTATGTGCTTATGACTCTGTGAATCTCTACGATGAATTAGTTATGCCATGACATGTTACAGGTTTGCCTACTGTCCTGCCCCGTATCCCTAATGTACTATGCTACGAAGGGTGTCCCACGGGATCACCACCTATGTTCATGTTACAAATGTAATCACAACCACCTATGTTCATGTTACAAATGTAATCACTGCGTACCCTCGGGTCGCTTCCTCTGCTTATGCCTACGCTTATTCCTATGTCGGGTACACGGGTTCATACGACAAAAAAGGTGATAGCTAGGCCCAGTAGTGGGTCTCTTACTGAGTATGATTGCTCACCATTTTCTATGTTTTTTTTCCCAGGTAAGGAGCATGGTGGCCAGGCGCGTGGCCGAGGAAATCCGTGATCGTACCATGGGATTATCGACACTGCTTCCGCACCTTAGCCTAGGGTATAGCGTATTGGACTTGTAAGATAGTAGTATTTGCTTACATTAAACTGTTTGTTGTTTGTTTTTGATATTGTTATGTTCGGTTTTCTTTTCTTGAGATTTTGCCTAACGATTTAAGGGGTACCCCGCTCAAGCGTTTTTACTCCTCTATGTTTGGTTTATTAAAATATCAGAAAAATTGACCGTTTTATGAATTTGATCGACTTTATCTATAATGTGTGTTACCGTGTCTCTTAATTTCCAATGCACTCACTGAATGGTCATGCATGACGTAGTGACGTATTAGTTTTAAAGGGTCAGGTCGTTACAATCGAAGCCCTTGATCATCTCTCGTTTCATTTGTATCTAAAAAAACAACAAAGAAAAAAATGTCAGAAAAAAATAAGGAGAAAATGAGTAGTTAAGAAAATAAAAGAAAGAAAAGGAAAAATGGTGAAAAAAAAAGGAAAAAAATGAACGAAAAGAGAAAAAGAAAAATTAGAAAAAAAAAAAAAAACAACTAAGGAAGAAAAGGGGAAGAGGAAGGGAAAAAGAAGAACGAAAAAAAAACGTGAAAAAGAAAAAGAGAATATGAAAAAAAAGGGCATTTTGAATTCAACTTTATCTTTTTTCGAGCTTCACTCAGCCATGTACATGCATAAATCTCGAAAAGGGGCATTTGTTGAATGAGAATTTTTTGGACCAATCACAAATTGCCACGTCATTTACCAAATTAATGATGAAAATATGAATAATTGAATTTGGGACTAATTAAAAGTTGACATGTGTCCCAAATTGTAATTAAAGACATAAATTGGCAAATTCCGATTACGTCACATGTTTTTTTCTTGATCGTTGGATTGAATAAAATAGTCTGATCCAATTTTGTATTGATATTTGGGTTAAAATCCAATTGAGTCCTAAAATAGACTTAATTTGGCCTAAAGACCAAAGTCCAATTGGGCCCAATCCATGGATCAACCAAGCCCAAGCCCACAAAGCCCACTTGAGAACTCTATAAATAAAAGAGTTCTCTTCATTTGTGGGGTTCACAAAATTCATAGAAAATTCATACTTTTCAGAGCCTAGAGAGAATTCTCCCCATAATTAGAGAACTCCTAACTTCTGAAGCTGAACCAGACTCCTAACTCCTGAAGTTGAACCAGACTTGAAGACTGAAGTCCTTTGAAACACAAACATTCTTCCGAGACTCCAACTTCAAGAATATCCACGCGTTCTGCTTCCATACAACAAGCAGACGCATTCAATTGAGAGAGAATCAGAGGATCAAGTACTAAAGATCGAACCACATCCGCATCAAAACTACATTAACTTAAGTTCAAATCCATGAAACAAGTTTCTCAGGAAACCTCATGCGACAGTCCCTTATAGACAAATATTTTATAAATTTAATCTTTTATTGCATTCATTTTAATCCTATTAACACAAATATAAAAGATTATCCTATTTCTAATCATATTAGAAATATTAAACATAAGTCTAGGTGAATCAATTTTAAACCATTTAAAATAATTTTTCTTATGTTTTCATGCAACTATTTATTATAGATTTTAATCTATTCCATTAAACACACAACCCTTATATTTTAATGAAAAAATAAAATCTATAACATGCATTCTAATGACATTAGCTATATATAACAATTACTAAGGTAATGCCATGCTCAAAGCAAATTTGTTTTCATTAAACAATAGTACACTTTATATTAGATAATGAAAAATAAGCATATCTAACCATACAATATAACAATTATATTAAGGTATGATGCATGATTATGCTTATTACATGCAACTATATAATATAACATTTACATTAAATAGAATGCATGTGCATGCTTAATAATATCATACAATCAAATAATGTAACACTTACATTAAATATGATGCATGATAATGTTTATCCTAAGGTGGGATTTTAAACTATATGACATACATTATGCAACATATATCAACTTTGATTTAATCATACATCCCATGCAAAAATTAAATTAAAACAACAAAATAGACCAGTTTTGGGCACCTCTAAGAATTAATTAAATCAATATAATCAAATTATATCAATTTAATTAATTAAAATAACATTAAATTTAAAACATAGAAAAACCGCTCCAACCCAACTTGAACCCATGATTTGCTGATTTCTGGACGCACATTCAACAAATGAAGCATCGTGACATTGATGGAAAGCATCGCTACGCTCTGTCTTTTGAACTCGTAGCGCAGCAATGCTCAAGGCGAGCGCCGTGAAACTTGCACCTTTGTGTCGAAACGTAGCGCACAATGTCGCGATGCTGTGCTATACGCTGAAGCACAAACAGCTTCCTCTGTTTCGATTTTGCTCCAATTTTGGTCCATTTATAAACTTTTTCCTCAACAACTCTTGCAAACGACAGACGTATAAACTTGATAGCAGAATTTAAATGCCCAAAACAACGGGCCCTTACACATTTTGATCACATCAAAACAGTAAATCTAAGGTGCTAAAATTGAAAACGTGTATTTTGCAAACCCACATTCACAATGCACAATAAGCACCCATCTTTTCTCCAAATGTTTGTTTTCAAACTGAAATTTAGAGGCACAACTTGGCTCTGATACCAATTGAAGGAATTGAATCCTCTAAGGAAGCGAATGATCGCATTGTGCCAATAAGTTTCTTTTGAAAACATAAATTACAGAGAAGAGAAAAACTTGGATAAACTACAAAGAACATGTCATTGAGAAGAATTTAAGAGTTAGAAGTTTTCTACCTTTGAAGACTGTCTTTAGGTATGTTTGTCTTCTTCTCACCTAATTATGAACCGGAAAGAAACTCCTCCAACAAAGAATATAGGGAACATTTGGAACACCACCAAGAAGCCTTCCTTGCTATTCTCAAGAAGAACCAAAAGGAGTTGTGGGCTCTCTTTTTGGTAAAGGGAGGAAGAAGAAGATGAGAGGGAACTCTTAAAGAGGAAAAAACTTGAGAGAAAAAATCACAGAACTCTTTTGAAAGCAACTTCTGTCTCTTCTCTTTCTTATTCCCTCTTTTCTTTTTACGTGAAAAAGATGTGAGATTGGAAAAATAACTCCCTTAAACGTGGGGATTTATTTATTTATTTATTTAAGTTTAATTATAATATATTAAATCATATTTAATATATATAAATAAATAAAATCAATTAATTAACAATTGATTAATTAATTAATTAAATATCACATATTTAATTTTATTTGAATCATATACAAACAATCTTCTCTCACATAACCTATAGTTTTAATATGAATCTCATTCATAGTAATTTTAACCTATAGTTTTTTATATCAATCTCATTCATATAATTAAAATTTAAATCTTATTGAAATATTGATCTCTCTTATAACATAAAGTATAAATTTTGAATCTCATTCAAAAATTAAATAACTTTATATTCTAATGTATCTATATACATTATACTAATTGTATCATATACAATTAACTTCCTTATTAATTTGAACATTTCAAATTAAACCAAAATATTTGATTGAATACAAAGCCTTAATGAGCTAGCAAGAGGACCTTATGGACCTATAGATTAGAAGCTACAATGGTATGAGATTAATCAATTAAACTCTTTAATTAGATTAATCAATATTCATTAACTGTAGGTCATTCTACTAAAGACCTACAGATGCACTCTTTGCACAATAGATATATTTTTGTGTCCGCGGAAATAACTAATCAACAACAAATCAACCCTTCACAAATTACTCATAACTACAACAGGCTCAAATTACCGTTTTACCCCTGTAGTTACATTTAACTCCTTAAGTACCATTGATCCCTCTAATGAACAAATAGTTTATAGTCCAACTATAAACTAACCCCTCTTGGACGAGTGAGAGGCTGAGACATCTATGTTTAAGACTCGGAATCAGTCCTTAAGGGAGCAATTTATCTATTTACCCTATACATGGGAAGGAGTAAATCCCATCTTGTGAAGATATGTTCCTAGCTCCATATTCAGACAAATCTTTAAAATGGTATGCATATTGCGTCGGTGATCTGACCACTCTCACTCATATAGCCTTTGACTTCATAACGCACTCAGGATTAACGTCGAGTCACCTATAGTCATCCTATGAAATGTTAAGTTCTTCAATTAACAGCGTTACAAGGAAAAATTAAACATTTCGGCGGTCTGATTTTATACAAACTCTTTGCATAGGATACCCCCACTCACATGTCTCCACATGAACGATTAGGATCTAATCAATTGTAACACTTTACACTTTTTGTAATACTTTACAACTTTTGTAACAATTACAAAGTGGATCGTATCCGTAGTATTATCAGAATAAGGACCCAACCTTATCATTAGACTACAAACTTTTTGGTTATTTAAACATGATTCATCCCCGTATGTTAACCATATACATGTTTAACTTTACATAAAGTAACCATGGATCTTAGTTTATTGGATTGAGTTAATGCAAAAAGACAAATAAAATAAATTATTATTTTTATTGAATAAATAAAATGTATTTACAATTTTACAAAACTACAAGACCTCAAGAGATTCCAAACAATAGAGGAGTGGGTTAGTGGAAAGGAGTTATAACTCTCTTCCCTTCTGTGTTACGTGAGATAACATAGAACAAAAGAAAGAGATTCCAAAAATTCTTTTTAACTCTTAAGTTCTCTTAAGAAAAACAACCTAAGAAAAGTTGTCTACAAAATGTTTTTTTCCCTTTTTCAAAAGAAGATTCCACCATCTCATCCTTGGCCTTGAGAATACTAAGGAAGACCTATTGGTGGTGTCCAGTTCAAAGAAGAAGAGGATGTCTAGTTCGTGACATTTGTACAAGACGTGGAGAAGATGTGAAGAAAGAGATCTTCAAGGTTAAATTTTCTTATTCCCTATGTTTAAAGTTCATAACATGTTTATCCCTGTACTTTTATCTCTATTCTGTATAAACTTCTTGGAACAAAAATGAGGCAAAGCGATCAATAGTTTCTGCAAAAGGAAATCAATTCCTTCACATAGTAGGAGTTAAATCACTATTGACAAAACTGTTGACCACCAATAATCTTTCGAAAAAGATGATGTCTCTAGCAAGAGTCATATCACTATTGCAAATTATAGTTGATGATAAAGTCGGAGTACAAGTTACTTGTAGTTTGACTCTTGTAAAAAAAATGGAAGCAAGTTATTTTTAAAAAGTTTGAAAAAAAGTGATGCAACAAATAAAGAAATATATAGGCAGAGAGCAATTTTTTTAAAAAAAAAAAAAAGAAAGAAGAAAAGAAATACAAGTTTAAAAAAGTTGCTGCAAGAAAAAAAATTAAAAGATAGGAAGGAAATATAGTTAATTAAAATAAAATAAAATAAAATAAGCTCAAATTCAAGTTGTGTTCTTAGAATTTTTTTTTTAAAAAAAAAAGTCAAAAAAGAAAAGAAAAGAAAAACTAGAGAAAAATAGAGTTGGAAGATAAAAAATAAAAATAAAAAAAAGAAAAATTGGGGACAATTTAAATTTTTTAAGAAAAAAATATGTAAAACCTTTTAAATTGTAATTTAAAAAAAAATTAAATGGTAAAAATATAGAAGAAGAAAAAATGGTTGAAATTGTTACTAGATCATTTTAGAAAAACTAATAAACTAAATATTAAAACTATAAAATTCGAAACGGTGAAGACATACTTACAAAATTATATTTTTAAATGCCTGGCAAATTTTTTGTTTTTATTTTTAAAAAAAAAAAAGAAAGAAAAAGAAAAGAAAAAGGGTAAACATGCACGCGGTAGCAAAGACGATGCAAATTTTATTTTAGTCGATAATTCAGAGGTGCCGGAGCAATTTGAGAATTCGATTATTTCATAAAATTGAAACGATAATTCAGCGAAGCAAACAGGGACGTTGTGCTGTGGAGAAGAAAATAAGAGGCGGTCCGGTGTGGAACAACTCTTGTGGCTGGCGGCTATTTGATTTTGGTGGAATCTCAATCACCCACCAGCTGATTCAGTAAGACTCGACCCGTCACCTCAGGGGAAGAGAAAGATCATGGCGTCGATATGCCTTTTCAGCTCTAAAACCCTAGTCTTACCCTCGGCAACCTACCTACCAATATCTTCTTCATCTACAAGCCATAGTTGCTGTTTTGGTGGCTGCAGATGCTCTTTCCCCATCAAGCCAATTTCCTCTTCTAATTTGATTATTGGTACAAGGAGAATGGGGAGGCAGGTGGTTCGAATGGCCCCGGAGGAAGAGAAGCTCACTCGTCGCAATCCTCTCGATTTCCCAATTGTATCTTTCTCACTCTTCCCCTCCTTTATTTTCCTTCCTTATTTGATGTTTTTCGCCTTGTAACAGACTTCTTCTTCGTGGGATTTTGGTGTTTTTGCTTCCCGTTTTCATTAGCTTTGCTAGTGTATTTCCAGATTAGTTAGAGTGGATAATTGATATAATTATTGTTTAAATTTTATCTTTGAATGTTGTTTTAAAGGCTTATTCATGAGTTATCATGCCATGCTTTTACTGCAAATTGTATCTGCCTGCTTGTTCGGCTATGTCTGCATTTCCCATGGAAAGTTATCCATCCTCCAGCTCTATAGAAGTGGGCTGTATCTGTCTTTGGACGAGGGACATCAACCATCATAATGTTTTCCTATTCACATTGTCACTTGATTGGTGAGAATGGGCCATAGTCTTATGGACTCCACTGCCTGCAAATGTTTTCTTAAATCACATTCAATTTGTAGTCTGAATATTTCTGCTGATAATTCTCGTTGTTTGTATTCTAGCACTGGGTAAATGTTTATTGCACTGTAGTAGTTAAACTGAGATAGGAGAAAGATATTGGCAGTCCTCAAGGTGTTTTCGTCGCAGTTCGCAGGGTTGGTGTGGTCTCTTTGATGTATTTGGCTACAACTTTGCCAGTTCGTAGGATAGCAGGAAGTCGATTGAGAAGTTGCTCCTCCATCCTTTGATCCTCCATTTCGAGAGAAAGGGTTGCTTTTGTGGCAAGATAGAGTGTATGTTATTTTGTGGGGTTTGTGGGGCAAGAGAAATAATAGAATCTTCAGGGTGACTGGTTGAGTGAGAGTTCTTATAGGGATGTTCAGGACCTGGTTAGGTTCCCTGTTTCTCTCTAGACCTCGGTGTTTAGATCTTTTTGTAAGTATTCGTTGAGTAACATCTTATTTGACTGGAGTCCCTTCTTTTTTGTGGGCTTCTCCTTTTTGTATGCTCATGTATTCATTTATTTCTTTTCTTTTTCAATGAAAGTTCGGTATTTTCATTAATATATATATATATATTGGCACTCCTCATGAATGTTGGGTAATTTATTAGTTTATATTGGCACGTTGCCTTTTCATTTTTGGGGTTGTGTGGATTATAATGCATGTCATGGCATTCATTGGATGTGTGATGTCTGTTTGTTCAATTTATTTCCTGTTCTGCTGCCGGGTTTCTACATCATGCTTTTGGAACATTCATGTGATATCGTTAGCTTGTTCATAAATTTTTCATGAATTCATTTGCAAGGGCACACTTTTTTTATGCTTAATTCATTTTCTAATATGAAACTGTTGATGTTCTTACCAGCAAAACTAAGTTATAGTTAGTAACTAGTAAGATAATTCTATGAAGTGCTTGAGTATTTACATTTAGTGCTTCTTGACTATCTGGTTGCAGGAGTGGGAGAGGCCTAAGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCATTACCACCACCATTGCCATGTGATCCCCCTGAAGAAGATGAGGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGAGAAGCAGTAGATGTTGTCCTTGAAGAACTCCTTAAGTTCCATTCCCTTTTTCCATCTCCACATCGTTTCTTGATAGGCTGAAAGCATTAGATGTCCCTAGGGATGATGAGCTGAGATAGTTTACAATGAACCAAATATGTTTGAGAGCTACTACTGATCTTGCAATTCTATATTAAATGAAAAATCTCTTTAGGATTTCCTATTCTCTTGAGTTTTAACCCCCACTTAAGGCAATGTATTCTACGAATAATTATCATGAATGATATGCCTTCTCTCCCGTTTCCACTCCTAATTCCAAGTATGTTTCAATTCTATATTTGAGTGTTGTTTCAGAGCAAATCTGTAGAAGCTGACGCAGGATACACAGGGAGTTTCACAATACTATTGACACAGATCCCAGAACGATTTGTTACAATTGGTCGTTTTTATTATCATTGTTTTTTCTATGCAACTCCTAGTTGTTCTCCAAGAACGTGATTGTGCAATTATTAACTATTAGAGAAAAGCCTTTCCCTTTCCCTTTCCCTTTCTCAAAGGCCCATCATTATTAGCTAAAGGCTAAACGACAGTGGATTGTGTAATATCAGAATAAGTATAAATTTGTATGGTGCATGCTTACAGAAACAGGCATTCTGATCTACTCTACTTGCACTCTGAGCCATTTTTTAACAATTGGGGCTGGATTTATGTAGCCTTTGACTTTATAGATGGCCACTTTATGTATAGTATATAGTGGTTCTCAGTTCTCACTTTGTAAAATGCATTATAGAAGTACTTGAAAATTCCCAACTTTAAAAATTCGTTGGTTGCAAACTAACTTCTTGGATCCAAGTCAAACTTGCATTCTTTGCCAGAAATATTGAAAGTGCGCAGGTCCCAGTGTCAGCAGTTGATGATTTGCAGCTTCTGCAATTCTCGCTCTCTTTTGAAGAATCATCCATCCACAGGGCATCTACTTTGGCTTCCTCTCTTATTCAAACTCATGGTATGTACTATCAACTTGAACTAGCTTTTTCATCTTTCTTGATTCTTCAATTCCTTGTCTTTGTTTGATAACTACACGTAGGTATCTGATATTCAATACTTAGTTTTTTATATCCTCAACTGTCAGGTATTGAACAATGAATGCTCTTTCTTTTTTGGTCGCAGACTCTTACCCCCTTTCTGTTCAGGTCACTGGTAAGGCTGCTACTATCCCTAATTGTCCAGCCTGCAGCCTCTGTCTCAACCTTGCTTTTTTACAGTGACATTCTTCCTCAGCATATGGTTTCGGAGAGACTTGTTCGACATGAATTGCTCGATCGAGAAAACTACCTTTTCCATTTTCTTGTTAGCTTTTTGAAGTGCTTTTGGTGAAGAAAGAAGAAGGAAGAAGAAGACGATGATGAGGAAAAGGGCACATCTTTTTCATAGACCCATCTCAATTTTTTCCCCTCGGGTTTATCCGGCTTTTCCCTGAGCACTGTTTTTGAAGGTTATATTTCTAAAACTACTTTGATTGTGACCAAAAACTTACAATAAAATGATATTGTGCTTGTTGCTTTCTCTGTTGTCGTTAGGCAAACAGAACTCTCTTGTTAATTTCTTAGTGCTGTGTCCACTCTCCACACGTCTAATCGATCATATTCTCAAATTAATCGAACGTAAAAGTCTTTTTAAATGCTTAAAAACACTTTTTTTGATGATCATTTTTCTTTAAATGTTTCTTTAAATGTTTCGATGATGTTTAGGCTTCTTCTCCCTCCACTTACCTTTATTATGTCGCCCATGTTTAGGCTCTGTCCCTTATATTTATAAACTGAATGAATATTGAGAAAAAGAAAAGGGTAAGATGTAAAATCAAAGCCTCTGCTGACTTCAATTGATCCATTTCCAACAGGCCAAG

mRNA sequence

ATGGTACTCATCGCCATCGTCATCAGCACTCGTCGCCATCATCACAGCTTTCAGCGTAGCGGCATCATCATAGTCCTCGCGCCGCAGCGTTTCGGTCCTCATCGCGCCGCATCGTCACAACCTGCATTTCACCGCATCATCAGTCCATCGCCACATCATCACAGCCCGCATTTCGCCACATCATCACAGCCCCCATTTTGCCGCATCATCATAGTCTTCATCGCCGCGTCGCCTCAGCTCTCTTTGCGACGCGTCGACACAGCTTTCATAGCACTCTGCCGCAGTCGAAGCAAACAGGGACGTTGTGCTGTGGAGAAGAAAATAAGAGGCGGTCCGGTGTGGAACAACTCTTGTGGCTGGCGGCTATTTGATTTTGGTGGAATCTCAATCACCCACCAGCTGATTCAATGCTCTTTCCCCATCAAGCCAATTTCCTCTTCTAATTTGATTATTGGTACAAGGAGAATGGGGAGGCAGGTGGTTCGAATGGCCCCGGAGGAAGAGAAGCTCACTCGTCGCAATCCTCTCGATTTCCCAATTGAGTGGGAGAGGCCTAAGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCATTACCACCACCATTGCCATGTGATCCCCCTGAAGAAGATGAGGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGAGAAGCAGTAGATGTTGTCCTTGAAGAACTCCTTAAGTTCCATTCCCTTTTTCCATCTCCACATCGTTTCTTGATAGGCTGAAAGCATTAGATGTCCCTAGGGATGATGAGCTGAGATAGTTTACAATGAACCAAATATGTTTGAGAGCTACTACTGATCTTGCAATTCTATATTAAATGAAAAATCTCTTTAGGATTTCCTATTCTCTTGAGTTTTAACCCCCACTTAAGGCAATGTATTCTACGAATAATTATCATGAATGATATGCCTTCTCTCCCGTTTCCACTCCTAATTCCAAGTATGTTTCAATTCTATATTTGAGTGTTGTTTCAGAGCAAATCTGTAGAAGCTGACGCAGGATACACAGGGAGTTTCACAATACTATTGACACAGATCCCAGAACGATTTGTTACAATTGGTCGTTTTTATTATCATTGTTTTTTCTATGCAACTCCTAGTTGTTCTCCAAGAACGTGATTGTGCAATTATTAACTATTAGAGAAAAGCCTTTCCCTTTCCCTTTCCCTTTCTCAAAGGCCCATCATTATTAGCTAAAGGCTAAACGACAGTGGATTGTGTAATATCAGAATAAGTATAAATTTGTATGGTGCATGCTTACAGAAACAGGCATTCTGATCTACTCTACTTGCACTCTGAGCCATTTTTTAACAATTGGGGCTGGATTTATGTAGCCTTTGACTTTATAGATGGCCACTTTATGTATAGTATATAGTGGTTCTCAGTTCTCACTTTGTAAAATGCATTATAGAAGTACTTGAAAATTCCCAACTTTAAAAATTCGTTGGTTGCAAACTAACTTCTTGGATCCAAGTCAAACTTGCATTCTTTGCCAGAAATATTGAAAGTGCGCAGGTCCCAGTGTCAGCAGTTGATGATTTGCAGCTTCTGCAATTCTCGCTCTCTTTTGAAGAATCATCCATCCACAGGGCATCTACTTTGGCTTCCTCTCTTATTCAAACTCATGACTCTTACCCCCTTTCTGTTCAGGTCACTGGTAAGGCTGCTACTATCCCTAATTGTCCAGCCTGCAGCCTCTGTCTCAACCTTGCTTTTTTACAGTGACATTCTTCCTCAGCATATGGTTTCGGAGAGACTTGTTCGACATGAATTGCTCGATCGAGAAAACTACCTTTTCCATTTTCTTGTTAGCTTTTTGAAGTGCTTTTGGTGAAGAAAGAAGAAGGAAGAAGAAGACGATGATGAGGAAAAGGGCACATCTTTTTCATAGACCCATCTCAATTTTTTCCCCTCGGGTTTATCCGGCTTTTCCCTGAGCACTGTTTTTGAAGGTTATATTTCTAAAACTACTTTGATTGTGACCAAAAACTTACAATAAAATGATATTGTGCTTGTTGCTTTCTCTGTTGTCGTTAGGCAAACAGAACTCTCTTGTTAATTTCTTAGTGCTGTGTCCACTCTCCACACGTCTAATCGATCATATTCTCAAATTAATCGAACGTAAAAGTCTTTTTAAATGCTTAAAAACACTTTTTTTGATGATCATTTTTCTTTAAATGTTTCTTTAAATGTTTCGATGATGTTTAGGCTTCTTCTCCCTCCACTTACCTTTATTATGTCGCCCATGTTTAGGCTCTGTCCCTTATATTTATAAACTGAATGAATATTGAGAAAAAGAAAAGGGTAAGATGTAAAATCAAAGCCTCTGCTGACTTCAATTGATCCATTTCCAACAGGCCAAG

Coding sequence (CDS)

ATGGTACTCATCGCCATCGTCATCAGCACTCGTCGCCATCATCACAGCTTTCAGCGTAGCGGCATCATCATAGTCCTCGCGCCGCAGCGTTTCGGTCCTCATCGCGCCGCATCGTCACAACCTGCATTTCACCGCATCATCAGTCCATCGCCACATCATCACAGCCCGCATTTCGCCACATCATCACAGCCCCCATTTTGCCGCATCATCATAGTCTTCATCGCCGCGTCGCCTCAGCTCTCTTTGCGACGCGTCGACACAGCTTTCATAGCACTCTGCCGCAGTCGAAGCAAACAGGGACGTTGTGCTGTGGAGAAGAAAATAAGAGGCGGTCCGGTGTGGAACAACTCTTGTGGCTGGCGGCTATTTGATTTTGGTGGAATCTCAATCACCCACCAGCTGATTCAATGCTCTTTCCCCATCAAGCCAATTTCCTCTTCTAATTTGATTATTGGTACAAGGAGAATGGGGAGGCAGGTGGTTCGAATGGCCCCGGAGGAAGAGAAGCTCACTCGTCGCAATCCTCTCGATTTCCCAATTGAGTGGGAGAGGCCTAAGCCAGGACGTAGACCAGACATCTTTCCTCAATTTAGCCCCATGAAAACACCATTACCACCACCATTGCCATGTGATCCCCCTGAAGAAGATGAGGAGGAGGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGACAAGGAAAATCCAGATGAGCCTGAGAAGCAGTAG

Protein sequence

MVLIAIVISTRRHHHSFQRSGIIIVLAPQRFGPHRAASSQPAFHRIISPSPHHHSPHFATSSQPPFCRIIIVFIAASPQLSLRRVDTAFIALCRSRSKQGRCAVEKKIRGGPVWNNSCGWRLFDFGGISITHQLIQCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ

Homology

[Close]

BLAST of CcUC06G118200 vs. NCBI nr
Match: XP_038879472.1 (uncharacterized protein LOC120071334 [Benincasa hispida])

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-44
Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 136 QCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 195
           +CSFP KPIS+SNLIIG RR GRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP
Sbjct: 37  RCSFPNKPISTSNLIIGRRRTGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 96

Query: 196 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 242
           QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Sbjct: 97  QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of CcUC06G118200 vs. NCBI nr
Match: XP_022965880.1 (uncharacterized protein LOC111465629 [Cucurbita maxima])

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-43
Identity = 97/106 (91.51%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 136 QCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 195
           +CSFP +PI++SNLIIG RR GR VVRMAPEEEKLTRRNPLDFPIEW+RPKPGRRPDIFP
Sbjct: 37  RCSFPNRPIANSNLIIGKRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFP 96

Query: 196 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 242
           QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Sbjct: 97  QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of CcUC06G118200 vs. NCBI nr
Match: XP_022933792.1 (uncharacterized protein LOC111441100 [Cucurbita moschata])

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-43
Identity = 97/106 (91.51%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 136 QCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 195
           +CSFP +PI++SNLIIG RR GR VVRMAPEEEKLTRRNPLDFPIEW+RPKPGRRPDIFP
Sbjct: 37  RCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFP 96

Query: 196 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 242
           QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Sbjct: 97  QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of CcUC06G118200 vs. NCBI nr
Match: XP_023530781.1 (uncharacterized protein LOC111793229 [Cucurbita pepo subsp. pepo] >KAG6587954.1 hypothetical protein SDJN03_16519, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021844.1 hypothetical protein SDJN02_15572 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.9 bits (468), Expect = 8.3e-43
Identity = 97/106 (91.51%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 136 QCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 195
           +CSFP +PI++SNLIIG RR GR VVRMAPEEEKLTRRNPLDFPIEW+RPKPGRRPDIFP
Sbjct: 37  RCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFP 96

Query: 196 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 242
           QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Sbjct: 97  QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of CcUC06G118200 vs. NCBI nr
Match: TYK00104.1 (coiled-coil domain-containing protein 9-like [Cucumis melo var. makuwa])

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-42
Identity = 96/106 (90.57%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 136 QCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 195
           +CSFPIKP+S+SNLI G RR GRQVVRMAPEEEKLTRRNPLDFPIEWERP+PGRRPDIFP
Sbjct: 104 RCSFPIKPLSTSNLIFGRRRTGRQVVRMAPEEEKLTRRNPLDFPIEWERPRPGRRPDIFP 163

Query: 196 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 242
           QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENP+ PE+Q
Sbjct: 164 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPEGPEQQ 209

[Close]

BLAST of CcUC06G118200 vs. ExPASy TrEMBL
Match: A0A6J1HQ01 (uncharacterized protein LOC111465629 OS=Cucurbita maxima OX=3661 GN=LOC111465629 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.0e-43
Identity = 97/106 (91.51%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 136 QCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 195
           +CSFP +PI++SNLIIG RR GR VVRMAPEEEKLTRRNPLDFPIEW+RPKPGRRPDIFP
Sbjct: 37  RCSFPNRPIANSNLIIGKRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFP 96

Query: 196 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 242
           QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Sbjct: 97  QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of CcUC06G118200 vs. ExPASy TrEMBL
Match: A0A6J1F0T5 (uncharacterized protein LOC111441100 OS=Cucurbita moschata OX=3662 GN=LOC111441100 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 4.0e-43
Identity = 97/106 (91.51%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 136 QCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 195
           +CSFP +PI++SNLIIG RR GR VVRMAPEEEKLTRRNPLDFPIEW+RPKPGRRPDIFP
Sbjct: 37  RCSFPNRPIANSNLIIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWDRPKPGRRPDIFP 96

Query: 196 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 242
           QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ
Sbjct: 97  QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 142

[Close]

BLAST of CcUC06G118200 vs. ExPASy TrEMBL
Match: A0A5D3BLF1 (Coiled-coil domain-containing protein 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00600 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 5.2e-43
Identity = 96/106 (90.57%), Postives = 102/106 (96.23%), Query Frame = 0


Query: 136 QCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 195
           +CSFPIKP+S+SNLI G RR GRQVVRMAPEEEKLTRRNPLDFPIEWERP+PGRRPDIFP
Sbjct: 104 RCSFPIKPLSTSNLIFGRRRTGRQVVRMAPEEEKLTRRNPLDFPIEWERPRPGRRPDIFP 163

Query: 196 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 242
           QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENP+ PE+Q
Sbjct: 164 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPEGPEQQ 209

[Close]

BLAST of CcUC06G118200 vs. ExPASy TrEMBL
Match: A0A6J1CVD6 (uncharacterized protein LOC111014560 OS=Momordica charantia OX=3673 GN=LOC111014560 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 6.8e-43
Identity = 94/104 (90.38%), Postives = 101/104 (97.12%), Query Frame = 0


Query: 136 QCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 195
           +CSFP KP+S+S+L+IG RR G+QVVRMAP+EEKLTRRNPLDFPIEWERPKPGRRPDIFP
Sbjct: 37  RCSFPYKPVSNSHLVIGRRRTGKQVVRMAPDEEKLTRRNPLDFPIEWERPKPGRRPDIFP 96

Query: 196 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE 240
           QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE
Sbjct: 97  QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPE 140

[Close]

BLAST of CcUC06G118200 vs. ExPASy TrEMBL
Match: A0A5A7TT41 (Histone chaperone ASF1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001310 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 7.6e-42
Identity = 95/106 (89.62%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 136 QCSFPIKPISSSNLIIGTRRMGRQVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP 195
           +CSFPIKP+S+SNLI G RR GRQVVRMAPEEEKLTRRNPLDFPIEWERP+PGRRPDIFP
Sbjct: 104 RCSFPIKPLSTSNLIFGRRRTGRQVVRMAPEEEKLTRRNPLDFPIEWERPRPGRRPDIFP 163

Query: 196 QFSPMKTPLPPPLPCDPPEEDEEEEEKKEEEEENPDKENPDEPEKQ 242
           QFSPMKTPLP PLPCDPPEEDEEEEEKKEEEEENPDKENP+ PE+Q
Sbjct: 164 QFSPMKTPLPLPLPCDPPEEDEEEEEKKEEEEENPDKENPEGPEQQ 209

[Close]

BLAST of CcUC06G118200 vs. TAIR 10
Match: AT2G17240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G24506.1); Has 2795 Blast hits to 943 proteins in 155 species: Archae - 0; Bacteria - 388; Metazoa - 809; Fungi - 72; Plants - 153; Viruses - 54; Other Eukaryotes - 1319 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 3.2e-32
Identity = 74/83 (89.16%), Postives = 79/83 (95.18%), Query Frame = 0


Query: 159 QVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 218
           QVV MAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP+FSPMKTPLPPP+P DPPEEDEE
Sbjct: 57  QVVSMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKTPLPPPMPYDPPEEDEE 116

Query: 219 EEEKKEEEEENPDKENPDEPEKQ 242
           EEEKKEEEEENPD+E  ++PEKQ
Sbjct: 117 EEEKKEEEEENPDQEEEEQPEKQ 139

[Close]

BLAST of CcUC06G118200 vs. TAIR 10
Match: AT3G24506.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17240.1); Has 4864 Blast hits to 709 proteins in 125 species: Archae - 0; Bacteria - 592; Metazoa - 786; Fungi - 33; Plants - 410; Viruses - 61; Other Eukaryotes - 2982 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 3.6e-28
Identity = 68/84 (80.95%), Postives = 79/84 (94.05%), Query Frame = 0


Query: 159 QVVRMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPQFSPMKTPLPPPLPCDPPEEDEE 218
           QVV MAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFP+FSPMK+PLPPP+P DPPEE+EE
Sbjct: 65  QVVAMAPEEEKLTRRNPLDFPIEWERPKPGRRPDIFPKFSPMKSPLPPPMPYDPPEEEEE 124

Query: 219 EEEKKEEE-EENPDKENPDEPEKQ 242
           EEEKKEEE E++P+KE+ D+P+ +
Sbjct: 125 EEEKKEEETEDDPEKEDEDQPDNR 148

The following BLAST results are available for this feature:

BLAST of CcUC06G118200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879472.1	1.2e-44	95.28	uncharacterized protein LOC120071334 [Benincasa hispida]	[more]
XP_022965880.1	8.3e-43	91.51	uncharacterized protein LOC111465629 [Cucurbita maxima]	[more]
XP_022933792.1	8.3e-43	91.51	uncharacterized protein LOC111441100 [Cucurbita moschata]	[more]
XP_023530781.1	8.3e-43	91.51	uncharacterized protein LOC111793229 [Cucurbita pepo subsp. pepo] >KAG6587954.1 ...	[more]
TYK00104.1	1.1e-42	90.57	coiled-coil domain-containing protein 9-like [Cucumis melo var. makuwa]	[more]

BLAST of CcUC06G118200 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC06G118200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQ01	4.0e-43	91.51	uncharacterized protein LOC111465629 OS=Cucurbita maxima OX=3661 GN=LOC111465629...	[more]
A0A6J1F0T5	4.0e-43	91.51	uncharacterized protein LOC111441100 OS=Cucurbita moschata OX=3662 GN=LOC1114411...	[more]
A0A5D3BLF1	5.2e-43	90.57	Coiled-coil domain-containing protein 9-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1CVD6	6.8e-43	90.38	uncharacterized protein LOC111014560 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5A7TT41	7.6e-42	89.62	Histone chaperone ASF1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of CcUC06G118200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17240.1	3.2e-32	89.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G24506.1	3.6e-28	80.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 211..233
None	No IPR available	PANTHER	PTHR35713:SF4	SUBFAMILY NOT NAMED	coord: 140..239
None	No IPR available	PANTHER	PTHR35713	ARGININE/SERINE-RICH-LIKE SPLICING FACTOR	coord: 140..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC06G118200.1	CcUC06G118200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity